BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3561840.2.1
(1168 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR751298.1|DR751298 13-L022242-065-008-E02-SeLA MPIZ-ADI... 90 1e-015
gb|M55553.1|ATHAGL5A Arabidopsis thaliana transcription fac... 90 1e-015
ref|NM_180046.1| Arabidopsis thaliana SHP2 (SHATTERPROOF 2)... 90 1e-015
ref|NM_129844.3| Arabidopsis thaliana SHP2 (SHATTERPROOF 2)... 90 1e-015
gb|DR751299.1|DR751299 13-L022243-065-008-E02-SeLB MPIZ-ADI... 86 2e-014
gb|M55550.1|ATHAGL1A Arabidopsis thaliana transcription fac... 80 1e-012
emb|AX320930.1| Sequence 6 from Patent WO0179517 80 1e-012
gb|AY086196.1| Arabidopsis thaliana clone 22339 mRNA, compl... 80 1e-012
gb|AC006931.6| Arabidopsis thaliana chromosome 2 clone F7D1... 80 1e-012
gb|AY727646.1| Arabidopsis thaliana ecotype Ler-0 SHATTERPR... 80 1e-012
gb|AY727647.1| Arabidopsis thaliana ecotype Wassilewskija S... 80 1e-012
gb|AY727648.1| Arabidopsis thaliana ecotype Co-1 SHATTERPRO... 80 1e-012
gb|AY727649.1| Arabidopsis thaliana ecotype Es-0 SHATTERPRO... 80 1e-012
gb|AY727650.1| Arabidopsis thaliana ecotype Ita-0 SHATTERPR... 80 1e-012
gb|AY727651.1| Arabidopsis thaliana ecotype Kas-1 SHATTERPR... 80 1e-012
gb|AY727652.1| Arabidopsis thaliana ecotype Li-3 SHATTERPRO... 80 1e-012
gb|AY727653.1| Arabidopsis thaliana ecotype Lu-1 SHATTERPRO... 80 1e-012
gb|AY727654.1| Arabidopsis thaliana ecotype Mt-0 SHATTERPRO... 80 1e-012
gb|AY727655.1| Arabidopsis thaliana ecotype PLA-0 SHATTERPR... 80 1e-012
gb|AY727656.1| Arabidopsis thaliana ecotype Pog-0 SHATTERPR... 80 1e-012
gb|AY727657.1| Arabidopsis thaliana ecotype Tsu-1 SHATTERPR... 80 1e-012
gb|AY727658.1| Arabidopsis thaliana ecotype PHW-1 SHATTERPR... 80 1e-012
gb|AY727659.1| Arabidopsis thaliana ecotype PHW-33 SHATTERP... 80 1e-012
gb|AY727660.1| Arabidopsis thaliana ecotype Kondara SHATTER... 80 1e-012
gb|AY727661.1| Arabidopsis thaliana ecotype An-2 SHATTERPRO... 80 1e-012
gb|AY727662.1| Arabidopsis thaliana ecotype Br-0 SHATTERPRO... 80 1e-012
gb|AY727663.1| Arabidopsis thaliana ecotype Cha-0 SHATTERPR... 80 1e-012
gb|AY727664.1| Arabidopsis thaliana ecotype Di-0 SHATTERPRO... 80 1e-012
gb|AY727665.1| Arabidopsis thaliana ecotype Est-1 SHATTERPR... 80 1e-012
gb|AY727666.1| Arabidopsis thaliana ecotype Kl-5 SHATTERPRO... 80 1e-012
gb|AY727667.1| Arabidopsis thaliana ecotype Ko-2 SHATTERPRO... 80 1e-012
gb|AY727668.1| Arabidopsis thaliana ecotype Lip-0 SHATTERPR... 80 1e-012
gb|AY727669.1| Arabidopsis thaliana ecotype 9481B SHATTERPR... 80 1e-012
ref|NM_115740.2| Arabidopsis thaliana SHP1 (SHATTERPROOF 1)... 80 1e-012
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 80 1e-012
gb|DR750029.1|DR750029 78-L022529-065-010-F10-SeLA MPIZ-ADI... 72 2e-010
gb|DR750030.1|DR750030 78-L022530-065-010-F10-SeLB MPIZ-ADI... 72 2e-010
emb|X53579.1|ATAGAMSG A.thaliana agamous (AG) gene 72 2e-010
ref|NM_118013.2| Arabidopsis thaliana AG (AGAMOUS); transcr... 64 6e-008
emb|AX320929.1| Sequence 5 from Patent WO0179517 60 9e-007
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 60 9e-007
gb|AY727622.1| Arabidopsis thaliana ecotype Ler-0 SHATTERPR... 60 9e-007
gb|AY727623.1| Arabidopsis thaliana ecotype Wassilewskija S... 60 9e-007
gb|AY727624.1| Arabidopsis thaliana ecotype Co-1 SHATTERPRO... 60 9e-007
gb|AY727625.1| Arabidopsis thaliana ecotype Es-0 SHATTERPRO... 60 9e-007
gb|AY727626.1| Arabidopsis thaliana ecotype Ita-0 SHATTERPR... 60 9e-007
gb|AY727627.1| Arabidopsis thaliana ecotype Kas-1 SHATTERPR... 60 9e-007
gb|AY727628.1| Arabidopsis thaliana ecotype Li-3 SHATTERPRO... 60 9e-007
gb|AY727629.1| Arabidopsis thaliana ecotype Lu-1 SHATTERPRO... 60 9e-007
gb|AY727630.1| Arabidopsis thaliana ecotype Mt-0 SHATTERPRO... 60 9e-007
gb|AY727631.1| Arabidopsis thaliana ecotype PLA-0 SHATTERPR... 60 9e-007
gb|AY727632.1| Arabidopsis thaliana ecotype Pog-0 SHATTERPR... 60 9e-007
gb|AY727633.1| Arabidopsis thaliana ecotype Tsu-1 SHATTERPR... 60 9e-007
gb|AY727634.1| Arabidopsis thaliana ecotype PHW-1 SHATTERPR... 60 9e-007
gb|AY727635.1| Arabidopsis thaliana ecotype PHW-33 SHATTERP... 60 9e-007
gb|AY727636.1| Arabidopsis thaliana ecotype Kondara SHATTER... 60 9e-007
gb|AY727637.1| Arabidopsis thaliana ecotype An-2 SHATTERPRO... 60 9e-007
gb|AY727638.1| Arabidopsis thaliana ecotype Br-0 SHATTERPRO... 60 9e-007
gb|AY727639.1| Arabidopsis thaliana ecotype Di-0 SHATTERPRO... 60 9e-007
gb|AY727640.1| Arabidopsis thaliana ecotype Est-1 SHATTERPR... 60 9e-007
gb|AY727641.1| Arabidopsis thaliana ecotype Kl-5 SHATTERPRO... 60 9e-007
gb|AY727642.1| Arabidopsis thaliana ecotype Ko-2 SHATTERPRO... 60 9e-007
gb|AY727643.1| Arabidopsis thaliana ecotype Lip-0 SHATTERPR... 60 9e-007
gb|AY727644.1| Arabidopsis thaliana ecotype 9481B SHATTERPR... 60 9e-007
emb|AL353032.1|ATT20N10 Arabidopsis thaliana DNA chromosome... 60 9e-007
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 60 9e-007
gb|BT003841.1| Arabidopsis thaliana clone RAFL15-25-E19 (R2... 56 1e-005
gb|DR750758.1|DR750758 41-L020098-065-001-A06-SeLA MPIZ-ADI... 46 0.014
gb|F14228.1|F14228 ATTS5150 Ors-B Arabidopsis thaliana cDNA... 44 0.054
gb|F14178.1|F14178 ATTS5100 Ors-B Arabidopsis thaliana cDNA... 44 0.054
gb|AI993585.1|AI993585 701496687 A. thaliana, Ohio State cl... 44 0.054
gb|BE524598.1|BE524598 M51H6STM Arabidopsis developing seed... 44 0.054
gb|BG459170.1|BG459170 M64G03STM Arabidopsis developing see... 44 0.054
gb|BP868458.1|BP868458 BP868458 RAFL21 Arabidopsis thaliana... 44 0.054
gb|AF312663.1|AF312663 Arabidopsis thaliana MADS-box protei... 44 0.054
emb|AX380953.1| Sequence 7 from Patent WO0210415 44 0.054
gb|AY087639.1| Arabidopsis thaliana clone 37288 mRNA, compl... 44 0.054
emb|BX825810.1|CNS0A537 Arabidopsis thaliana Full-length cD... 44 0.054
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 44 0.054
emb|AL021711.2|ATF13C5 Arabidopsis thaliana DNA chromosome ... 44 0.054
emb|AL137080.2|ATF28O9 Arabidopsis thaliana DNA chromosome ... 44 0.054
emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosom... 44 0.054
dbj|AK220679.1| Arabidopsis thaliana mRNA for MADS transcri... 44 0.054
dbj|AK222220.1| Arabidopsis thaliana mRNA for MADS transcri... 44 0.054
ref|NM_115599.2| Arabidopsis thaliana AGL18; transcription ... 44 0.054
ref|NM_202721.1| Arabidopsis thaliana AGL18; transcription ... 44 0.054
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 44 0.054
gb|BP562882.2|BP562882 BP562882 RAFL15 Arabidopsis thaliana... 42 0.21
>gb|DR751298.1|DR751298 13-L022242-065-008-E02-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 008-E02, mRNA sequence
Length = 779
Score = 89.7 bits (45), Expect = 1e-015
Identities = 138/169 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 165 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 224
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 225 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 284
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacagtgtga 290
||||||||| || || || ||||||||||||||||||||||||||||
Sbjct: 285 atcttctccactcgaggccgtctctacgagtacgccaacaacagtgtga 333
>gb|M55553.1|ATHAGL5A Arabidopsis thaliana transcription factor (AGL5) mRNA, complete cds
Length = 963
Score = 89.7 bits (45), Expect = 1e-015
Identities = 138/169 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 141 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 200
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 201 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 260
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacagtgtga 290
||||||||| || || || ||||||||||||||||||||||||||||
Sbjct: 261 atcttctccactcgaggccgtctctacgagtacgccaacaacagtgtga 309
>ref|NM_180046.1| Arabidopsis thaliana SHP2 (SHATTERPROOF 2); transcription factor
AT2G42830 (SHP2) transcript variant AT2G42830.2 mRNA,
complete cds
Length = 1030
Score = 89.7 bits (45), Expect = 1e-015
Identities = 138/169 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 140 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 199
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 200 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 259
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacagtgtga 290
||||||||| || || || ||||||||||||||||||||||||||||
Sbjct: 260 atcttctccactcgaggccgtctctacgagtacgccaacaacagtgtga 308
>ref|NM_129844.3| Arabidopsis thaliana SHP2 (SHATTERPROOF 2); transcription factor
AT2G42830 (SHP2) transcript variant AT2G42830.1 mRNA,
complete cds
Length = 1025
Score = 89.7 bits (45), Expect = 1e-015
Identities = 138/169 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 141 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 200
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 201 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 260
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacagtgtga 290
||||||||| || || || ||||||||||||||||||||||||||||
Sbjct: 261 atcttctccactcgaggccgtctctacgagtacgccaacaacagtgtga 309
>gb|DR751299.1|DR751299 13-L022243-065-008-E02-SeLB MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 008-E02, mRNA sequence
Length = 834
Score = 85.7 bits (43), Expect = 2e-014
Identities = 133/163 (81%)
Strand = Plus / Minus
Query: 128 aagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaatgggctc 187
|||||||| |||||||| | || || || ||||| |||||||| || |||||||| |
Sbjct: 785 aagaggatagagaacaataggaatcgtcaagtcactttctgcaaacgacgcaatggttta 726
Query: 188 ctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtcgtcttc 247
|||||||| || || |||||||| ||| | || ||||| ||||| || || ||| |||||
Sbjct: 725 ctcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtcatcttc 666
Query: 248 tccagccgcggacgcctctacgagtacgccaacaacagtgtga 290
|||| || || || ||||||||||||||||||||||||||||
Sbjct: 665 tccactcgaggccgtctctacgagtacgccaacaacagtgtga 623
>gb|M55550.1|ATHAGL1A Arabidopsis thaliana transcription factor (AGL1), complete cds
Length = 895
Score = 79.8 bits (40), Expect = 1e-012
Identities = 124/152 (81%)
Strand = Plus / Plus
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
|||||||| || |||||||| || |||||||| || || || ||||| ||| | || ||
Sbjct: 112 ttctgcaaacgacgcaatggtcttctcaagaaagcttatgaactctctgtcttgtgtgat 171
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
||||| || || |||||| ||||||||| || || || ||||| |||||||||||||||
Sbjct: 172 gccgaagttgccctcgtcatcttctccactcgtggccgtctctatgagtacgccaacaac 231
Query: 284 agtgtgaaggctacgatcgagaggtacaagaa 315
||||||| || ||| || || |||||||||||
Sbjct: 232 agtgtgaggggtacaattgaaaggtacaagaa 263
>emb|AX320930.1| Sequence 6 from Patent WO0179517
Length = 6138
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 2764 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 2823
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 2824 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 2883
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 2884 atcttctccactcgaggccgtctctacgagtacgccaacaacag 2927
>gb|AY086196.1| Arabidopsis thaliana clone 22339 mRNA, complete sequence
Length = 1202
Score = 79.8 bits (40), Expect = 1e-012
Identities = 124/152 (81%)
Strand = Plus / Plus
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
|||||||| || |||||||| || |||||||| || || || ||||| ||| | || ||
Sbjct: 427 ttctgcaaacgacgcaatggtcttctcaagaaagcttatgaactctctgtcttgtgtgat 486
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
||||| || || |||||| ||||||||| || || || ||||| |||||||||||||||
Sbjct: 487 gccgaagttgccctcgtcatcttctccactcgtggccgtctctatgagtacgccaacaac 546
Query: 284 agtgtgaaggctacgatcgagaggtacaagaa 315
||||||| || ||| || || |||||||||||
Sbjct: 547 agtgtgaggggtacaattgaaaggtacaagaa 578
>gb|AC006931.6| Arabidopsis thaliana chromosome 2 clone F7D19 map m551, complete
sequence
Length = 115310
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Minus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 61081 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 61022
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 61021 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 60962
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 60961 atcttctccactcgaggccgtctctacgagtacgccaacaacag 60918
>gb|AY727646.1| Arabidopsis thaliana ecotype Ler-0 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4829
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1568 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1627
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1628 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1687
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1688 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1731
>gb|AY727647.1| Arabidopsis thaliana ecotype Wassilewskija SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4749
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1568 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1627
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1628 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1687
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1688 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1731
>gb|AY727648.1| Arabidopsis thaliana ecotype Co-1 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4815
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1568 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1627
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1628 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1687
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1688 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1731
>gb|AY727649.1| Arabidopsis thaliana ecotype Es-0 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4781
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1568 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1627
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1628 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1687
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1688 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1731
>gb|AY727650.1| Arabidopsis thaliana ecotype Ita-0 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4820
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1567 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1626
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1627 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1686
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1687 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1730
>gb|AY727651.1| Arabidopsis thaliana ecotype Kas-1 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4819
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1568 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1627
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1628 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1687
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1688 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1731
>gb|AY727652.1| Arabidopsis thaliana ecotype Li-3 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4805
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1568 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1627
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1628 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1687
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1688 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1731
>gb|AY727653.1| Arabidopsis thaliana ecotype Lu-1 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4832
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1567 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1626
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1627 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1686
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1687 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1730
>gb|AY727654.1| Arabidopsis thaliana ecotype Mt-0 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4807
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1568 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1627
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1628 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1687
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1688 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1731
>gb|AY727655.1| Arabidopsis thaliana ecotype PLA-0 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4822
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1568 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1627
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1628 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1687
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1688 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1731
>gb|AY727656.1| Arabidopsis thaliana ecotype Pog-0 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4805
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1568 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1627
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1628 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1687
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1688 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1731
>gb|AY727657.1| Arabidopsis thaliana ecotype Tsu-1 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4749
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1568 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1627
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1628 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1687
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1688 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1731
>gb|AY727658.1| Arabidopsis thaliana ecotype PHW-1 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4803
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1568 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1627
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1628 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1687
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1688 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1731
>gb|AY727659.1| Arabidopsis thaliana ecotype PHW-33 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4803
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1568 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1627
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1628 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1687
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1688 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1731
>gb|AY727660.1| Arabidopsis thaliana ecotype Kondara SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4805
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1568 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1627
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1628 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1687
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1688 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1731
>gb|AY727661.1| Arabidopsis thaliana ecotype An-2 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4803
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1568 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1627
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1628 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1687
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1688 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1731
>gb|AY727662.1| Arabidopsis thaliana ecotype Br-0 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4834
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1567 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1626
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1627 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1686
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1687 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1730
>gb|AY727663.1| Arabidopsis thaliana ecotype Cha-0 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4814
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1567 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1626
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1627 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1686
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1687 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1730
>gb|AY727664.1| Arabidopsis thaliana ecotype Di-0 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4829
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1568 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1627
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1628 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1687
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1688 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1731
>gb|AY727665.1| Arabidopsis thaliana ecotype Est-1 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4749
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1568 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1627
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1628 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1687
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1688 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1731
>gb|AY727666.1| Arabidopsis thaliana ecotype Kl-5 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4805
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1568 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1627
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1628 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1687
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1688 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1731
>gb|AY727667.1| Arabidopsis thaliana ecotype Ko-2 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4803
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1568 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1627
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1628 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1687
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1688 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1731
>gb|AY727668.1| Arabidopsis thaliana ecotype Lip-0 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4838
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1568 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1627
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1628 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1687
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1688 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1731
>gb|AY727669.1| Arabidopsis thaliana ecotype 9481B SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4834
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 1570 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 1629
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 1630 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 1689
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 1690 atcttctccactcgaggccgtctctacgagtacgccaacaacag 1733
>ref|NM_115740.2| Arabidopsis thaliana SHP1 (SHATTERPROOF 1); DNA binding /
transcription factor AT3G58780 (SHP1) mRNA, complete cds
Length = 1209
Score = 79.8 bits (40), Expect = 1e-012
Identities = 124/152 (81%)
Strand = Plus / Plus
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
|||||||| || |||||||| || |||||||| || || || ||||| ||| | || ||
Sbjct: 427 ttctgcaaacgacgcaatggtcttctcaagaaagcttatgaactctctgtcttgtgtgat 486
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
||||| || || |||||| ||||||||| || || || ||||| |||||||||||||||
Sbjct: 487 gccgaagttgccctcgtcatcttctccactcgtggccgtctctatgagtacgccaacaac 546
Query: 284 agtgtgaaggctacgatcgagaggtacaagaa 315
||||||| || ||| || || |||||||||||
Sbjct: 547 agtgtgaggggtacaattgaaaggtacaagaa 578
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 79.8 bits (40), Expect = 1e-012
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 122 gagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaat 181
||||| |||||||| ||||||| |||| || || ||||| |||||||| || ||||||
Sbjct: 17827742 gagataaagaggatagagaacactacgaatcgtcaagtcactttctgcaaacgacgcaat 17827801
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
|| | |||||||| || || |||||||| ||| | || ||||| ||||| || || |||
Sbjct: 17827802 ggtttactcaagaaagcttatgagctctctgtcttgtgtgacgctgaggttgctcttgtc 17827861
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
||||||||| || || || |||||||||||||||||||||||
Sbjct: 17827862 atcttctccactcgaggccgtctctacgagtacgccaacaacag 17827905
>gb|DR750029.1|DR750029 78-L022529-065-010-F10-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 010-F10, mRNA sequence
Length = 910
Score = 71.9 bits (36), Expect = 2e-010
Identities = 108/132 (81%)
Strand = Plus / Plus
Query: 188 ctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtcgtcttc 247
|||||||| || ||||||||||| || ||||| || || || || || ||| |||| |||
Sbjct: 236 ctcaagaaagcttacgagctctctgttctctgtgatgctgaagtcgcactcatcgttttc 295
Query: 248 tccagccgcggacgcctctacgagtacgccaacaacagtgtgaaggctacgatcgagagg 307
|| ||||| || || ||||| |||||| | ||||||||||| || | ||| || ||||||
Sbjct: 296 tctagccgtggtcgtctctatgagtactctaacaacagtgtaaaaggtactattgagagg 355
Query: 308 tacaagaaggca 319
||||||||||||
Sbjct: 356 tacaagaaggca 367
>gb|DR750030.1|DR750030 78-L022530-065-010-F10-SeLB MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 010-F10, mRNA sequence
Length = 838
Score = 71.9 bits (36), Expect = 2e-010
Identities = 108/132 (81%)
Strand = Plus / Minus
Query: 188 ctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtcgtcttc 247
|||||||| || ||||||||||| || ||||| || || || || || ||| |||| |||
Sbjct: 747 ctcaagaaagcttacgagctctctgttctctgtgatgctgaagtcgcactcatcgttttc 688
Query: 248 tccagccgcggacgcctctacgagtacgccaacaacagtgtgaaggctacgatcgagagg 307
|| ||||| || || ||||| |||||| | ||||||||||| || | ||| || ||||||
Sbjct: 687 tctagccgtggtcgtctctatgagtactctaacaacagtgtaaaaggtactattgagagg 628
Query: 308 tacaagaaggca 319
||||||||||||
Sbjct: 627 tacaagaaggca 616
>emb|X53579.1|ATAGAMSG A.thaliana agamous (AG) gene
Length = 1458
Score = 71.9 bits (36), Expect = 2e-010
Identities = 108/132 (81%)
Strand = Plus / Plus
Query: 188 ctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtcgtcttc 247
|||||||| || ||||||||||| || ||||| || || || || || ||| |||| |||
Sbjct: 647 ctcaagaaagcttacgagctctctgttctctgtgatgctgaagtcgcactcatcgttttc 706
Query: 248 tccagccgcggacgcctctacgagtacgccaacaacagtgtgaaggctacgatcgagagg 307
|| ||||| || || ||||| |||||| | ||||||||||| || | ||| || ||||||
Sbjct: 707 tctagccgtggtcgtctctatgagtactctaacaacagtgtaaaaggtactattgagagg 766
Query: 308 tacaagaaggca 319
||||||||||||
Sbjct: 767 tacaagaaggca 778
>ref|NM_118013.2| Arabidopsis thaliana AG (AGAMOUS); transcription factor AT4G18960
(AG) mRNA, partial cds
Length = 1532
Score = 63.9 bits (32), Expect = 6e-008
Identities = 107/132 (81%)
Strand = Plus / Plus
Query: 188 ctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtcgtcttc 247
|||||||| || ||||||||||| || || || || || || || || ||| ||||||||
Sbjct: 639 ctcaagaaagcttacgagctctctgttctttgtgatgctgaagtcgcactcatcgtcttc 698
Query: 248 tccagccgcggacgcctctacgagtacgccaacaacagtgtgaaggctacgatcgagagg 307
|| ||||| || || ||||| |||||| | ||||||||||| || | || || ||||||
Sbjct: 699 tctagccgtggtcgtctctatgagtactctaacaacagtgtaaaagggactattgagagg 758
Query: 308 tacaagaaggca 319
||||||||||||
Sbjct: 759 tacaagaaggca 770
>emb|AX320929.1| Sequence 5 from Patent WO0179517
Length = 5622
Score = 60.0 bits (30), Expect = 9e-007
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
|||||||| || |||||||| || |||||||| || || || ||||| ||| | || ||
Sbjct: 2711 ttctgcaaacgacgcaatggtcttctcaagaaagcttatgaactctctgtcttgtgtgat 2770
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
||||| || || |||||| ||||||||| || || || ||||| |||||||||||||||
Sbjct: 2771 gccgaagttgccctcgtcatcttctccactcgtggccgtctctatgagtacgccaacaac 2830
Query: 284 ag 285
||
Sbjct: 2831 ag 2832
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 60.0 bits (30), Expect = 9e-007
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
|||||||| || |||||||| || |||||||| || || || ||||| ||| | || ||
Sbjct: 21697800 ttctgcaaacgacgcaatggtcttctcaagaaagcttatgaactctctgtcttgtgtgat 21697859
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
||||| || || |||||| ||||||||| || || || ||||| |||||||||||||||
Sbjct: 21697860 gccgaagttgccctcgtcatcttctccactcgtggccgtctctatgagtacgccaacaac 21697919
Query: 284 ag 285
||
Sbjct: 21697920 ag 21697921
Score = 44.1 bits (22), Expect = 0.054
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaa 141
|||||||| |||||||||||||| |||| ||| |||||
Sbjct: 21197363 atggggagaggaaggattgagattaagaagattgagaa 21197400
>gb|AY727622.1| Arabidopsis thaliana ecotype Ler-0 SHATTERPROOF1 (SHP1) gene,
complete cds
Length = 4594
Score = 60.0 bits (30), Expect = 9e-007
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
|||||||| || |||||||| || |||||||| || || || ||||| ||| | || ||
Sbjct: 2021 ttctgcaaacgacgcaatggtcttctcaagaaagcttatgaactctctgtcttgtgtgat 2080
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
||||| || || |||||| ||||||||| || || || ||||| |||||||||||||||
Sbjct: 2081 gccgaagttgccctcgtcatcttctccactcgtggccgtctctatgagtacgccaacaac 2140
Query: 284 ag 285
||
Sbjct: 2141 ag 2142
>gb|AY727623.1| Arabidopsis thaliana ecotype Wassilewskija SHATTERPROOF1 (SHP1) gene,
complete cds
Length = 4598
Score = 60.0 bits (30), Expect = 9e-007
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
|||||||| || |||||||| || |||||||| || || || ||||| ||| | || ||
Sbjct: 2021 ttctgcaaacgacgcaatggtcttctcaagaaagcttatgaactctctgtcttgtgtgat 2080
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
||||| || || |||||| ||||||||| || || || ||||| |||||||||||||||
Sbjct: 2081 gccgaagttgccctcgtcatcttctccactcgtggccgtctctatgagtacgccaacaac 2140
Query: 284 ag 285
||
Sbjct: 2141 ag 2142
>gb|AY727624.1| Arabidopsis thaliana ecotype Co-1 SHATTERPROOF1 (SHP1) gene, complete
cds
Length = 4617
Score = 60.0 bits (30), Expect = 9e-007
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
|||||||| || |||||||| || |||||||| || || || ||||| ||| | || ||
Sbjct: 2021 ttctgcaaacgacgcaatggtcttctcaagaaagcttatgaactctctgtcttgtgtgat 2080
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
||||| || || |||||| ||||||||| || || || ||||| |||||||||||||||
Sbjct: 2081 gccgaagttgccctcgtcatcttctccactcgtggccgtctctatgagtacgccaacaac 2140
Query: 284 ag 285
||
Sbjct: 2141 ag 2142
>gb|AY727625.1| Arabidopsis thaliana ecotype Es-0 SHATTERPROOF1 (SHP1) gene, complete
cds
Length = 4595
Score = 60.0 bits (30), Expect = 9e-007
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
|||||||| || |||||||| || |||||||| || || || ||||| ||| | || ||
Sbjct: 2021 ttctgcaaacgacgcaatggtcttctcaagaaagcttatgaactctctgtcttgtgtgat 2080
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
||||| || || |||||| ||||||||| || || || ||||| |||||||||||||||
Sbjct: 2081 gccgaagttgccctcgtcatcttctccactcgtggccgtctctatgagtacgccaacaac 2140
Query: 284 ag 285
||
Sbjct: 2141 ag 2142
>gb|AY727626.1| Arabidopsis thaliana ecotype Ita-0 SHATTERPROOF1 (SHP1) gene,
complete cds
Length = 4598
Score = 60.0 bits (30), Expect = 9e-007
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
|||||||| || |||||||| || |||||||| || || || ||||| ||| | || ||
Sbjct: 2021 ttctgcaaacgacgcaatggtcttctcaagaaagcttatgaactctctgtcttgtgtgat 2080
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
||||| || || |||||| ||||||||| || || || ||||| |||||||||||||||
Sbjct: 2081 gccgaagttgccctcgtcatcttctccactcgtggccgtctctatgagtacgccaacaac 2140
Query: 284 ag 285
||
Sbjct: 2141 ag 2142
>gb|AY727627.1| Arabidopsis thaliana ecotype Kas-1 SHATTERPROOF1 (SHP1) gene,
complete cds
Length = 4596
Score = 60.0 bits (30), Expect = 9e-007
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
|||||||| || |||||||| || |||||||| || || || ||||| ||| | || ||
Sbjct: 2021 ttctgcaaacgacgcaatggtcttctcaagaaagcttatgaactctctgtcttgtgtgat 2080
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
||||| || || |||||| ||||||||| || || || ||||| |||||||||||||||
Sbjct: 2081 gccgaagttgccctcgtcatcttctccactcgtggccgtctctatgagtacgccaacaac 2140
Query: 284 ag 285
||
Sbjct: 2141 ag 2142
>gb|AY727628.1| Arabidopsis thaliana ecotype Li-3 SHATTERPROOF1 (SHP1) gene, complete
cds
Length = 4589
Score = 60.0 bits (30), Expect = 9e-007
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
|||||||| || |||||||| || |||||||| || || || ||||| ||| | || ||
Sbjct: 2021 ttctgcaaacgacgcaatggtcttctcaagaaagcttatgaactctctgtcttgtgtgat 2080
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
||||| || || |||||| ||||||||| || || || ||||| |||||||||||||||
Sbjct: 2081 gccgaagttgccctcgtcatcttctccactcgtggccgtctctatgagtacgccaacaac 2140
Query: 284 ag 285
||
Sbjct: 2141 ag 2142
>gb|AY727629.1| Arabidopsis thaliana ecotype Lu-1 SHATTERPROOF1 (SHP1) gene, complete
cds
Length = 4591
Score = 60.0 bits (30), Expect = 9e-007
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
|||||||| || |||||||| || |||||||| || || || ||||| ||| | || ||
Sbjct: 2021 ttctgcaaacgacgcaatggtcttctcaagaaagcttatgaactctctgtcttgtgtgat 2080
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
||||| || || |||||| ||||||||| || || || ||||| |||||||||||||||
Sbjct: 2081 gccgaagttgccctcgtcatcttctccactcgtggccgtctctatgagtacgccaacaac 2140
Query: 284 ag 285
||
Sbjct: 2141 ag 2142
>gb|AY727630.1| Arabidopsis thaliana ecotype Mt-0 SHATTERPROOF1 (SHP1) gene, complete
cds
Length = 4592
Score = 60.0 bits (30), Expect = 9e-007
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
|||||||| || |||||||| || |||||||| || || || ||||| ||| | || ||
Sbjct: 2022 ttctgcaaacgacgcaatggtcttctcaagaaagcttatgaactctctgtcttgtgtgat 2081
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
||||| || || |||||| ||||||||| || || || ||||| |||||||||||||||
Sbjct: 2082 gccgaagttgccctcgtcatcttctccactcgtggccgtctctatgagtacgccaacaac 2141
Query: 284 ag 285
||
Sbjct: 2142 ag 2143
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 506,637
Number of Sequences: 1013581
Number of extensions: 506637
Number of successful extensions: 35845
Number of sequences better than 0.5: 88
Number of HSP's better than 0.5 without gapping: 87
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 34939
Number of HSP's gapped (non-prelim): 907
length of query: 1168
length of database: 908,940,872
effective HSP length: 20
effective length of query: 1148
effective length of database: 888,669,252
effective search space: 1020192301296
effective search space used: 1020192301296
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)