BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3390529.2.1
(407 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|AL764949.1| Arabidopsis thaliana T-DNA flanking sequenc... 40 0.28
emb|AL771037.1| Arabidopsis thaliana T-DNA flanking sequenc... 40 0.28
emb|AL771038.1| Arabidopsis thaliana T-DNA flanking sequenc... 40 0.28
gb|CK118698.1|CK118698 216i09.p1 AtM1 Arabidopsis thaliana ... 40 0.28
gb|CK120810.1|CK120810 205o03.p1 AtM1 Arabidopsis thaliana ... 40 0.28
gb|CK121935.1|CK121935 211p11.p1 AtM1 Arabidopsis thaliana ... 40 0.28
gb|M86358.1|ATHCFI Arabidopsis thaliana chalcone isomerase ... 40 0.28
emb|AX506518.1| Sequence 1213 from Patent WO0216655 40 0.28
gb|BT004265.1| Arabidopsis thaliana clone RAFL15-29-K13 (R2... 40 0.28
gb|BT005528.1| Arabidopsis thaliana clone U20894 putative c... 40 0.28
gb|AY086088.1| Arabidopsis thaliana clone 2122 mRNA, comple... 40 0.28
gb|BV007549.1| MASC_STS16178 Arabidopsis thaliana (C24 acce... 40 0.28
gb|BV007782.1| MASC_STS16172 Arabidopsis thaliana (Landsber... 40 0.28
gb|BV007784.1| MASC_STS16176 Arabidopsis thaliana (Cap Verd... 40 0.28
gb|BV007860.1| MASC_STS16169 Arabidopsis thaliana (Guecking... 40 0.28
gb|BV008113.1| MASC_STS16175 Arabidopsis thaliana (Lezoux/P... 40 0.28
gb|BV008115.1| MASC_STS16173 Arabidopsis thaliana (Weininge... 40 0.28
gb|BV008116.1| MASC_STS16170 Arabidopsis thaliana (Koncheze... 40 0.28
emb|BX822876.1|CNS0A711 Arabidopsis thaliana Full-length cD... 40 0.28
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 40 0.28
dbj|AB117785.1| Arabidopsis thaliana AT3G55120.1 gene for m... 40 0.28
emb|AJ287299.1|ATH287299 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ287300.1|ATH287300 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ287301.1|ATH287301 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ287302.1|ATH287302 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ287303.1|ATH287303 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ287304.1|ATH287304 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ287305.1|ATH287305 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ287306.1|ATH287306 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ287307.1|ATH287307 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ287308.1|ATH287308 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ287309.1|ATH287309 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ287310.1|ATH287310 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ287311.1|ATH287311 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ287312.1|ATH287312 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ287313.1|ATH287313 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ287314.1|ATH287314 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ287315.1|ATH287315 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ287316.1|ATH287316 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ287317.1|ATH287317 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ287318.1|ATH287318 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ287319.1|ATH287319 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ287320.1|ATH287320 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ287321.1|ATH287321 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ418046.1|ATH418046 Arabidopsis thaliana mRNA for chal... 40 0.28
emb|AJ492461.1|ATH492461 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492462.1|ATH492462 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492463.1|ATH492463 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492464.1|ATH492464 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492465.1|ATH492465 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492466.1|ATH492466 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492467.1|ATH492467 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492468.1|ATH492468 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492469.1|ATH492469 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492470.1|ATH492470 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492471.1|ATH492471 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492472.1|ATH492472 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492473.1|ATH492473 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492474.1|ATH492474 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492475.1|ATH492475 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492476.1|ATH492476 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492477.1|ATH492477 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492478.1|ATH492478 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492479.1|ATH492479 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492480.1|ATH492480 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492481.1|ATH492481 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492482.1|ATH492482 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492483.1|ATH492483 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492484.1|ATH492484 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492485.1|ATH492485 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492486.1|ATH492486 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492487.1|ATH492487 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492488.1|ATH492488 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492489.1|ATH492489 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492490.1|ATH492490 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492491.1|ATH492491 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492492.1|ATH492492 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492493.1|ATH492493 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492494.1|ATH492494 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492495.1|ATH492495 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492496.1|ATH492496 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492497.1|ATH492497 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492498.1|ATH492498 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492499.1|ATH492499 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492500.1|ATH492500 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492501.1|ATH492501 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492502.1|ATH492502 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AJ492503.1|ATH492503 Arabidopsis thaliana chi gene for ... 40 0.28
emb|AL132970.2|ATT15C9 Arabidopsis thaliana DNA chromosome ... 40 0.28
ref|NM_115370.3| Arabidopsis thaliana TT5 (TRANSPARENT TEST... 40 0.28
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 40 0.28
>emb|AL764949.1| Arabidopsis thaliana T-DNA flanking sequence GK-133A06-012719,
genomic survey sequence
Length = 414
Score = 40.1 bits (20), Expect = 0.28
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 369 ggagaaagtgacggagaact 388
||||||||||||||||||||
Sbjct: 13 ggagaaagtgacggagaact 32
>emb|AL771037.1| Arabidopsis thaliana T-DNA flanking sequence GK-176H03-013518,
genomic survey sequence
Length = 499
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 372 cggagaaagtgacggagaattgtgtggc 345
>emb|AL771038.1| Arabidopsis thaliana T-DNA flanking sequence GK-176H03-013533,
genomic survey sequence
Length = 446
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 371 cggagaaagtgacggagaattgtgtggc 344
>gb|CK118698.1|CK118698 216i09.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011I09216
5-PRIME, mRNA sequence
Length = 493
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 391 cggagaaagtgacggagaattgtgtggc 418
>gb|CK120810.1|CK120810 205o03.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011O03205
5-PRIME, mRNA sequence
Length = 795
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 388 cggagaaagtgacggagaattgtgtggc 415
>gb|CK121935.1|CK121935 211p11.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011P11211
5-PRIME, mRNA sequence
Length = 642
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 382 cggagaaagtgacggagaattgtgtggc 409
>gb|M86358.1|ATHCFI Arabidopsis thaliana chalcone isomerase gene, complete cds
Length = 1999
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1194 cggagaaagtgacggagaattgtgtggc 1221
>emb|AX506518.1| Sequence 1213 from Patent WO0216655
Length = 741
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 353 cggagaaagtgacggagaattgtgtggc 380
>gb|BT004265.1| Arabidopsis thaliana clone RAFL15-29-K13 (R20894) putative chalcone
isomerase (At3g55120) mRNA, complete cds
Length = 931
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 404 cggagaaagtgacggagaattgtgtggc 431
>gb|BT005528.1| Arabidopsis thaliana clone U20894 putative chalcone isomerase
(At3g55120) mRNA, complete cds
Length = 825
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 353 cggagaaagtgacggagaattgtgtggc 380
>gb|AY086088.1| Arabidopsis thaliana clone 2122 mRNA, complete sequence
Length = 901
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 408 cggagaaagtgacggagaattgtgtggc 435
>gb|BV007549.1| MASC_STS16178 Arabidopsis thaliana (C24 accession) genomic DNA
Arabidopsis thaliana STS genomic, sequence tagged site
Length = 1374
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 352 cggagaaagtgacggagaattgtgtggc 325
>gb|BV007782.1| MASC_STS16172 Arabidopsis thaliana (Landsberg erecta accession)
genomic DNA Arabidopsis thaliana STS genomic, sequence
tagged site
Length = 604
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 350 cggagaaagtgacggagaattgtgtggc 323
>gb|BV007784.1| MASC_STS16176 Arabidopsis thaliana (Cap Verde Islands-0 accession)
genomic DNA Arabidopsis thaliana STS genomic, sequence
tagged site
Length = 476
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 345 cggagaaagtgacggagaattgtgtggc 318
>gb|BV007860.1| MASC_STS16169 Arabidopsis thaliana (Gueckingen-0 accession) genomic
DNA Arabidopsis thaliana STS genomic, sequence tagged
site
Length = 1378
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 358 cggagaaagtgacggagaattgtgtggc 331
>gb|BV008113.1| MASC_STS16175 Arabidopsis thaliana (Lezoux/Puy-de-Dome-0 accession)
genomic DNA Arabidopsis thaliana STS genomic, sequence
tagged site
Length = 476
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 361 cggagaaagtgacggagaattgtgtggc 334
>gb|BV008115.1| MASC_STS16173 Arabidopsis thaliana (Weiningen-0 accession) genomic
DNA Arabidopsis thaliana STS genomic, sequence tagged
site
Length = 554
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 362 cggagaaagtgacggagaattgtgtggc 335
>gb|BV008116.1| MASC_STS16170 Arabidopsis thaliana (Konchezero accession) genomic
DNA Arabidopsis thaliana STS genomic, sequence tagged
site
Length = 491
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 358 cggagaaagtgacggagaattgtgtggc 331
>emb|BX822876.1|CNS0A711 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB6ZD03 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 570
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 48 cggagaaagtgacggagaattgtgtggc 75
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 20394331 cggagaaagtgacggagaattgtgtggc 20394304
>dbj|AB117785.1| Arabidopsis thaliana AT3G55120.1 gene for mutant protein of
chalcone isomerase, complete cds, allele: tt5-2
Length = 2004
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 887 cggagaaagtgacggagaattgtgtggc 914
>emb|AJ287299.1|ATH287299 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Can-0
Length = 1924
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1144 cggagaaagtgacggagaattgtgtggc 1171
>emb|AJ287300.1|ATH287300 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Cha-0
Length = 1924
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1144 cggagaaagtgacggagaattgtgtggc 1171
>emb|AJ287301.1|ATH287301 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Col-2
Length = 1877
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1097 cggagaaagtgacggagaattgtgtggc 1124
>emb|AJ287302.1|ATH287302 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Condhara
Length = 1924
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1144 cggagaaagtgacggagaattgtgtggc 1171
>emb|AJ287303.1|ATH287303 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Gran1
Length = 1924
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1144 cggagaaagtgacggagaattgtgtggc 1171
>emb|AJ287304.1|ATH287304 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Grap1
Length = 1924
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1144 cggagaaagtgacggagaattgtgtggc 1171
>emb|AJ287305.1|ATH287305 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Ita-0
Length = 1924
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1144 cggagaaagtgacggagaattgtgtggc 1171
>emb|AJ287306.1|ATH287306 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Kas-1
Length = 1924
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1144 cggagaaagtgacggagaattgtgtggc 1171
>emb|AJ287307.1|ATH287307 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Me-0
Length = 1924
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1144 cggagaaagtgacggagaattgtgtggc 1171
>emb|AJ287308.1|ATH287308 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Mh-0
Length = 1924
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1144 cggagaaagtgacggagaattgtgtggc 1171
>emb|AJ287309.1|ATH287309 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Mr-0
Length = 1924
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1144 cggagaaagtgacggagaattgtgtggc 1171
>emb|AJ287310.1|ATH287310 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Rv1
Length = 1924
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1144 cggagaaagtgacggagaattgtgtggc 1171
>emb|AJ287311.1|ATH287311 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Tv1
Length = 1924
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1144 cggagaaagtgacggagaattgtgtggc 1171
>emb|AJ287312.1|ATH287312 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Wlp1
Length = 1924
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1144 cggagaaagtgacggagaattgtgtggc 1171
>emb|AJ287313.1|ATH287313 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Cvi-0
Length = 1895
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1115 cggagaaagtgacggagaattgtgtggc 1142
>emb|AJ287314.1|ATH287314 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Ed1
Length = 1925
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1145 cggagaaagtgacggagaattgtgtggc 1172
>emb|AJ287315.1|ATH287315 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Gr-5
Length = 1925
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1145 cggagaaagtgacggagaattgtgtggc 1172
>emb|AJ287316.1|ATH287316 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Lu1
Length = 1923
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1143 cggagaaagtgacggagaattgtgtggc 1170
>emb|AJ287317.1|ATH287317 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Per-1
Length = 1923
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1143 cggagaaagtgacggagaattgtgtggc 1170
>emb|AJ287318.1|ATH287318 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Ri-0
Length = 1923
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1143 cggagaaagtgacggagaattgtgtggc 1170
>emb|AJ287319.1|ATH287319 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Tul-0
Length = 1923
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1143 cggagaaagtgacggagaattgtgtggc 1170
>emb|AJ287320.1|ATH287320 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Yo-0
Length = 1923
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1143 cggagaaagtgacggagaattgtgtggc 1170
>emb|AJ287321.1|ATH287321 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, ecotype Rub-1
Length = 1926
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1146 cggagaaagtgacggagaattgtgtggc 1173
>emb|AJ418046.1|ATH418046 Arabidopsis thaliana mRNA for chalcone flavanone isomerase (cfi
gene)
Length = 792
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 404 cggagaaagtgacggagaattgtgtggc 431
>emb|AJ492461.1|ATH492461 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, population variant Wlp2
Length = 1924
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1144 cggagaaagtgacggagaattgtgtggc 1171
>emb|AJ492462.1|ATH492462 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, population variant Wlp3
Length = 1924
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1144 cggagaaagtgacggagaattgtgtggc 1171
>emb|AJ492463.1|ATH492463 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, population variant Wlp4
Length = 1924
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1144 cggagaaagtgacggagaattgtgtggc 1171
>emb|AJ492464.1|ATH492464 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, population variant Wlp5
Length = 1924
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1144 cggagaaagtgacggagaattgtgtggc 1171
>emb|AJ492465.1|ATH492465 Arabidopsis thaliana chi gene for chalcone flavanone isomerase, exons
1-4, population variant Wlp6
Length = 1924
Score = 40.1 bits (20), Expect = 0.28
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 368 cggagaaagtgacggagaactgcgtggc 395
||||||||||||||||||| || |||||
Sbjct: 1144 cggagaaagtgacggagaattgtgtggc 1171
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 122,786
Number of Sequences: 1013581
Number of extensions: 122786
Number of successful extensions: 6889
Number of sequences better than 0.5: 91
Number of HSP's better than 0.5 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6689
Number of HSP's gapped (non-prelim): 200
length of query: 407
length of database: 908,940,872
effective HSP length: 20
effective length of query: 387
effective length of database: 888,669,252
effective search space: 343915000524
effective search space used: 343915000524
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)