BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3204680.2.2
(534 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AA042169.1|AA042169 24490 CD4-13 Arabidopsis thaliana cD... 86 7e-015
gb|AV791096.1|AV791096 AV791096 RAFL7 Arabidopsis thaliana ... 86 7e-015
gb|AV799147.1|AV799147 AV799147 RAFL9 Arabidopsis thaliana ... 86 7e-015
gb|AV800150.1|AV800150 AV800150 RAFL9 Arabidopsis thaliana ... 86 7e-015
gb|BP636455.1|BP636455 BP636455 RAFL18 Arabidopsis thaliana... 86 7e-015
gb|BP785400.1|BP785400 BP785400 RAFL7 Arabidopsis thaliana ... 86 7e-015
gb|BP788186.1|BP788186 BP788186 RAFL7 Arabidopsis thaliana ... 86 7e-015
gb|BP789449.1|BP789449 BP789449 RAFL7 Arabidopsis thaliana ... 86 7e-015
gb|BP789689.1|BP789689 BP789689 RAFL7 Arabidopsis thaliana ... 86 7e-015
gb|BP791730.1|BP791730 BP791730 RAFL7 Arabidopsis thaliana ... 86 7e-015
gb|BP793919.1|BP793919 BP793919 RAFL7 Arabidopsis thaliana ... 86 7e-015
gb|Z29888.1|Z29888 ATTS2332 Perp-dry-seedA Arabidopsis thal... 86 7e-015
gb|AF370333.1| Arabidopsis thaliana putative betaine aldehy... 86 7e-015
gb|AY062987.1| Arabidopsis thaliana putative betaine aldehy... 86 7e-015
ref|NM_114686.2| Arabidopsis thaliana ALDH10A9; aldehyde de... 86 7e-015
gb|N95958.1|N95958 21143 CD4-14 Arabidopsis thaliana cDNA c... 80 4e-013
gb|BP580359.1|BP580359 BP580359 RAFL14 Arabidopsis thaliana... 78 2e-012
gb|BP631113.1|BP631113 BP631113 RAFL17 Arabidopsis thaliana... 78 2e-012
gb|BP620270.1|BP620270 BP620270 RAFL16 Arabidopsis thaliana... 74 3e-011
gb|AV783248.1|AV783248 AV783248 RAFL5 Arabidopsis thaliana ... 72 1e-010
gb|BP584731.1|BP584731 BP584731 RAFL14 Arabidopsis thaliana... 72 1e-010
gb|BP612475.1|BP612475 BP612475 RAFL16 Arabidopsis thaliana... 72 1e-010
gb|BP631808.1|BP631808 BP631808 RAFL17 Arabidopsis thaliana... 70 4e-010
gb|BP655656.1|BP655656 BP655656 RAFL19 Arabidopsis thaliana... 70 4e-010
gb|AV537751.1|AV537751 AV537751 Arabidopsis thaliana roots ... 64 3e-008
gb|BP632539.1|BP632539 BP632539 RAFL17 Arabidopsis thaliana... 64 3e-008
gb|AV786136.1|AV786136 AV786136 RAFL6 Arabidopsis thaliana ... 62 1e-007
gb|BP636272.1|BP636272 BP636272 RAFL18 Arabidopsis thaliana... 62 1e-007
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 60 4e-007
emb|AL096856.1|ATT24C20 Arabidopsis thaliana DNA chromosome... 60 4e-007
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 60 4e-007
emb|BX823398.1|CNS0A7FR Arabidopsis thaliana Full-length cD... 58 2e-006
gb|AV789345.1|AV789345 AV789345 RAFL6 Arabidopsis thaliana ... 56 6e-006
gb|AV792807.1|AV792807 AV792807 RAFL7 Arabidopsis thaliana ... 56 6e-006
gb|AV800211.1|AV800211 AV800211 RAFL9 Arabidopsis thaliana ... 56 6e-006
gb|AV518932.1|AV518932 AV518932 Arabidopsis thaliana aboveg... 56 6e-006
gb|BP575980.1|BP575980 BP575980 RAFL14 Arabidopsis thaliana... 56 6e-006
gb|BP581524.1|BP581524 BP581524 RAFL14 Arabidopsis thaliana... 56 6e-006
gb|BP597919.1|BP597919 BP597919 RAFL16 Arabidopsis thaliana... 56 6e-006
gb|BP598322.1|BP598322 BP598322 RAFL16 Arabidopsis thaliana... 56 6e-006
gb|BP599421.1|BP599421 BP599421 RAFL16 Arabidopsis thaliana... 56 6e-006
gb|BP601244.1|BP601244 BP601244 RAFL16 Arabidopsis thaliana... 56 6e-006
gb|BP650560.1|BP650560 BP650560 RAFL19 Arabidopsis thaliana... 56 6e-006
gb|BP780945.1|BP780945 BP780945 RAFL7 Arabidopsis thaliana ... 56 6e-006
gb|BP787250.1|BP787250 BP787250 RAFL7 Arabidopsis thaliana ... 56 6e-006
gb|AY093071.1| Arabidopsis thaliana similar to betaine alde... 56 6e-006
gb|AY087395.1| Arabidopsis thaliana clone 34926 mRNA, compl... 56 6e-006
gb|BT008872.1| Arabidopsis thaliana At1g74920 mRNA, complet... 56 6e-006
emb|BX814003.1|CNS0ADO4 Arabidopsis thaliana Full-length cD... 56 6e-006
dbj|AK220905.1| Arabidopsis thaliana mRNA for betaine aldeh... 56 6e-006
dbj|AK222025.1| Arabidopsis thaliana mRNA for betaine aldeh... 56 6e-006
ref|NM_106150.2| Arabidopsis thaliana ALDH10A8; aldehyde de... 56 6e-006
gb|BP626631.1|BP626631 BP626631 RAFL17 Arabidopsis thaliana... 54 3e-005
gb|AA586226.1|AA586226 28875 Lambda-PRL2 Arabidopsis thalia... 52 1e-004
gb|AA651436.1|AA651436 31550 Lambda-PRL2 Arabidopsis thalia... 52 1e-004
gb|AV532020.1|AV532020 AV532020 Arabidopsis thaliana flower... 52 1e-004
gb|CK121744.1|CK121744 201a08.p1 AtM1 Arabidopsis thaliana ... 52 1e-004
gb|BP565560.1|BP565560 BP565560 RAFL14 Arabidopsis thaliana... 52 1e-004
gb|BP573802.1|BP573802 BP573802 RAFL14 Arabidopsis thaliana... 52 1e-004
gb|BP577063.1|BP577063 BP577063 RAFL14 Arabidopsis thaliana... 52 1e-004
gb|BP579190.1|BP579190 BP579190 RAFL14 Arabidopsis thaliana... 52 1e-004
gb|BP591744.1|BP591744 BP591744 RAFL15 Arabidopsis thaliana... 52 1e-004
gb|BP594053.1|BP594053 BP594053 RAFL15 Arabidopsis thaliana... 52 1e-004
gb|BP599404.1|BP599404 BP599404 RAFL16 Arabidopsis thaliana... 52 1e-004
gb|BP619533.1|BP619533 BP619533 RAFL16 Arabidopsis thaliana... 52 1e-004
gb|BP628330.1|BP628330 BP628330 RAFL17 Arabidopsis thaliana... 52 1e-004
gb|BP632820.1|BP632820 BP632820 RAFL17 Arabidopsis thaliana... 52 1e-004
gb|BP646724.1|BP646724 BP646724 RAFL19 Arabidopsis thaliana... 52 1e-004
gb|BP649934.1|BP649934 BP649934 RAFL19 Arabidopsis thaliana... 52 1e-004
gb|BP671873.1|BP671873 BP671873 RAFL21 Arabidopsis thaliana... 52 1e-004
gb|BP788626.1|BP788626 BP788626 RAFL7 Arabidopsis thaliana ... 52 1e-004
gb|BP817965.1|BP817965 BP817965 RAFL19 Arabidopsis thaliana... 52 1e-004
gb|T46358.1|T46358 9621 Lambda-PRL2 Arabidopsis thaliana cD... 48 0.002
gb|AV813977.1|AV813977 AV813977 RAFL9 Arabidopsis thaliana ... 48 0.002
gb|BP565479.1|BP565479 BP565479 RAFL14 Arabidopsis thaliana... 48 0.002
gb|BP591372.1|BP591372 BP591372 RAFL15 Arabidopsis thaliana... 48 0.002
gb|BP618182.1|BP618182 BP618182 RAFL16 Arabidopsis thaliana... 48 0.002
gb|BP640251.1|BP640251 BP640251 RAFL19 Arabidopsis thaliana... 48 0.002
gb|BP644564.1|BP644564 BP644564 RAFL19 Arabidopsis thaliana... 48 0.002
gb|BP646298.1|BP646298 BP646298 RAFL19 Arabidopsis thaliana... 48 0.002
gb|BP604583.1|BP604583 BP604583 RAFL16 Arabidopsis thaliana... 46 0.006
gb|BP573904.1|BP573904 BP573904 RAFL14 Arabidopsis thaliana... 44 0.024
gb|BP575643.1|BP575643 BP575643 RAFL14 Arabidopsis thaliana... 44 0.024
gb|BP643545.1|BP643545 BP643545 RAFL19 Arabidopsis thaliana... 44 0.024
gb|BP655451.1|BP655451 BP655451 RAFL19 Arabidopsis thaliana... 44 0.024
gb|BP659169.1|BP659169 BP659169 RAFL19 Arabidopsis thaliana... 44 0.024
gb|BP659178.1|BP659178 BP659178 RAFL19 Arabidopsis thaliana... 44 0.024
gb|BP581681.1|BP581681 BP581681 RAFL14 Arabidopsis thaliana... 42 0.095
gb|BP648873.1|BP648873 BP648873 RAFL19 Arabidopsis thaliana... 42 0.095
gb|AV789379.1|AV789379 AV789379 RAFL6 Arabidopsis thaliana ... 40 0.38
gb|AV790860.1|AV790860 AV790860 RAFL7 Arabidopsis thaliana ... 40 0.38
>gb|AA042169.1|AA042169 24490 CD4-13 Arabidopsis thaliana cDNA clone E3E2T7, mRNA sequence
Length = 545
Score = 85.7 bits (43), Expect = 7e-015
Identities = 127/155 (81%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 244 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 185
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 184 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 125
Query: 308 acggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 124 actcagtatatctctgatgaaccatggggatggta 90
>gb|AV791096.1|AV791096 AV791096 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-08-N03 3',
mRNA sequence
Length = 426
Score = 85.7 bits (43), Expect = 7e-015
Identities = 127/155 (81%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 318 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 259
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 258 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 199
Query: 308 acggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 198 actcagtatatctctgatgaaccatggggatggta 164
>gb|AV799147.1|AV799147 AV799147 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-18-N19 3',
mRNA sequence
Length = 415
Score = 85.7 bits (43), Expect = 7e-015
Identities = 127/155 (81%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 312 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 253
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 252 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 193
Query: 308 acggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 192 actcagtatatctctgatgaaccatggggatggta 158
>gb|AV800150.1|AV800150 AV800150 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-22-P08 3',
mRNA sequence
Length = 414
Score = 85.7 bits (43), Expect = 7e-015
Identities = 127/155 (81%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 254 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 195
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 194 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 135
Query: 308 acggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 134 actcagtatatctctgatgaaccatggggatggta 100
>gb|BP636455.1|BP636455 BP636455 RAFL18 Arabidopsis thaliana cDNA clone RAFL18-04-J09 3',
mRNA sequence
Length = 431
Score = 85.7 bits (43), Expect = 7e-015
Identities = 127/155 (81%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 296 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 237
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 236 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 177
Query: 308 acggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 176 actcagtatatctctgatgaaccatggggatggta 142
>gb|BP785400.1|BP785400 BP785400 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-94-K24 3',
mRNA sequence
Length = 402
Score = 85.7 bits (43), Expect = 7e-015
Identities = 127/155 (81%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 329 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 270
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 269 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 210
Query: 308 acggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 209 actcagtatatctctgatgaaccatggggatggta 175
>gb|BP788186.1|BP788186 BP788186 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-32-J20 3',
mRNA sequence
Length = 416
Score = 85.7 bits (43), Expect = 7e-015
Identities = 127/155 (81%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 312 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 253
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 252 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 193
Query: 308 acggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 192 actcagtatatctctgatgaaccatggggatggta 158
>gb|BP789449.1|BP789449 BP789449 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-39-A17 3',
mRNA sequence
Length = 410
Score = 85.7 bits (43), Expect = 7e-015
Identities = 127/155 (81%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 322 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 263
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 262 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 203
Query: 308 acggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 202 actcagtatatctctgatgaaccatggggatggta 168
>gb|BP789689.1|BP789689 BP789689 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-40-B16 3',
mRNA sequence
Length = 406
Score = 85.7 bits (43), Expect = 7e-015
Identities = 127/155 (81%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 312 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 253
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 252 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 193
Query: 308 acggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 192 actcagtatatctctgatgaaccatggggatggta 158
>gb|BP791730.1|BP791730 BP791730 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-48-L04 3',
mRNA sequence
Length = 401
Score = 85.7 bits (43), Expect = 7e-015
Identities = 127/155 (81%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 286 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 227
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 226 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 167
Query: 308 acggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 166 actcagtatatctctgatgaaccatggggatggta 132
>gb|BP793919.1|BP793919 BP793919 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-58-D22 3',
mRNA sequence
Length = 420
Score = 85.7 bits (43), Expect = 7e-015
Identities = 127/155 (81%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 287 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 228
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 227 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 168
Query: 308 acggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 167 actcagtatatctctgatgaaccatggggatggta 133
>gb|Z29888.1|Z29888 ATTS2332 Perp-dry-seedA Arabidopsis thaliana cDNA clone PAP199 3',
mRNA sequence
Length = 406
Score = 85.7 bits (43), Expect = 7e-015
Identities = 127/155 (81%)
Strand = Plus / Plus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 89 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 148
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 149 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 208
Query: 308 acggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 209 actcagtatatctctgatgaaccatggggatggta 243
>gb|AF370333.1| Arabidopsis thaliana putative betaine aldehyde dehydrogenase
(At3g48170) mRNA, complete cds
Length = 1721
Score = 85.7 bits (43), Expect = 7e-015
Identities = 127/155 (81%)
Strand = Plus / Plus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 1392 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 1451
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 1452 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 1511
Query: 308 acggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 1512 actcagtatatctctgatgaaccatggggatggta 1546
Score = 46.1 bits (23), Expect = 0.006
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 8 tcaatggaaatttggagggaggaagtcttcggtcc 42
||||||||||| ||||| ||||||||||| |||||
Sbjct: 1212 tcaatggaaatctggagagaggaagtctttggtcc 1246
>gb|AY062987.1| Arabidopsis thaliana putative betaine aldehyde dehydrogenase
(At3g48170) mRNA, complete cds
Length = 1543
Score = 85.7 bits (43), Expect = 7e-015
Identities = 127/155 (81%)
Strand = Plus / Plus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 1336 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 1395
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 1396 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 1455
Query: 308 acggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 1456 actcagtatatctctgatgaaccatggggatggta 1490
Score = 46.1 bits (23), Expect = 0.006
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 8 tcaatggaaatttggagggaggaagtcttcggtcc 42
||||||||||| ||||| ||||||||||| |||||
Sbjct: 1156 tcaatggaaatctggagagaggaagtctttggtcc 1190
>ref|NM_114686.2| Arabidopsis thaliana ALDH10A9; aldehyde dehydrogenase/ oxidoreductase
AT3G48170 (ALDH10A9) mRNA, complete cds
Length = 1722
Score = 85.7 bits (43), Expect = 7e-015
Identities = 127/155 (81%)
Strand = Plus / Plus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 1400 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 1459
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 1460 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 1519
Query: 308 acggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 1520 actcagtatatctctgatgaaccatggggatggta 1554
Score = 46.1 bits (23), Expect = 0.006
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 8 tcaatggaaatttggagggaggaagtcttcggtcc 42
||||||||||| ||||| ||||||||||| |||||
Sbjct: 1220 tcaatggaaatctggagagaggaagtctttggtcc 1254
>gb|N95958.1|N95958 21143 CD4-14 Arabidopsis thaliana cDNA clone F3F6T7, mRNA sequence
Length = 482
Score = 79.8 bits (40), Expect = 4e-013
Identities = 126/155 (81%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||| | ||||| ||||| || | ||| || |||
Sbjct: 258 tgggtcaactgctctcagccatgcttctgcnaagctccatggggtggaaccaaacgcagt 199
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 198 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 139
Query: 308 acggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 138 actcagtatatctctgatgaaccatggggatggta 104
>gb|BP580359.1|BP580359 BP580359 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-26-N04 3',
mRNA sequence
Length = 425
Score = 77.8 bits (39), Expect = 2e-012
Identities = 126/155 (81%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 312 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 253
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| ||||| | |||||| |||| |||| |||||| |||| | ||||| ||
Sbjct: 252 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtttgaagcaggtg 193
Query: 308 acggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 192 actcagtatatctctgatgaaccatggggatggta 158
>gb|BP631113.1|BP631113 BP631113 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-22-G21 3',
mRNA sequence
Length = 370
Score = 77.8 bits (39), Expect = 2e-012
Identities = 126/155 (81%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 307 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 248
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| | ||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 247 ggatttggccctgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 188
Query: 308 acggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 187 actcagtatatctctgatgaaccatggggatggta 153
>gb|BP620270.1|BP620270 BP620270 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-36-J17 3',
mRNA sequence
Length = 436
Score = 73.8 bits (37), Expect = 3e-011
Identities = 122/149 (81%), Gaps = 1/149 (0%)
Strand = Plus / Minus
Query: 194 aactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagtggattt 253
|||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||||||||
Sbjct: 320 aactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagtggattt 261
Query: 254 ggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtcacggag 313
|| ||||| | |||||| ||| | |||| |||||| |||| || ||||| || || ||
Sbjct: 260 ggccgtgaattgggagaatgggac-ttgagaactacttgagtgtgaagcaggtgactcag 202
Query: 314 tacatctctgatgagccgtggggatggta 342
|| ||||||||||| || |||||||||||
Sbjct: 201 tatatctctgatgaaccatggggatggta 173
>gb|AV783248.1|AV783248 AV783248 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-07-N03 3',
mRNA sequence
Length = 699
Score = 71.9 bits (36), Expect = 1e-010
Identities = 127/156 (81%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 313 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 254
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 253 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 194
Query: 308 acgga-gtacatctctgatgagccgtggggatggta 342
|| | ||| ||||||||||| || |||||||||||
Sbjct: 193 actcaggtatatctctgatgaaccatggggatggta 158
Score = 46.1 bits (23), Expect = 0.006
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 8 tcaatggaaatttggagggaggaagtcttcggtcc 42
||||||||||| ||||| ||||||||||| |||||
Sbjct: 493 tcaatggaaatctggagagaggaagtctttggtcc 459
>gb|BP584731.1|BP584731 BP584731 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-47-K10 3',
mRNA sequence
Length = 433
Score = 71.9 bits (36), Expect = 1e-010
Identities = 127/156 (81%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 296 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 237
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 236 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 177
Query: 308 a-cggagtacatctctgatgagccgtggggatggta 342
| | |||| ||||||||||| || |||||||||||
Sbjct: 176 agctcagtatatctctgatgaaccatggggatggta 141
>gb|BP612475.1|BP612475 BP612475 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-89-K10 3',
mRNA sequence
Length = 427
Score = 71.9 bits (36), Expect = 1e-010
Identities = 127/156 (81%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 328 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 269
Query: 248 ggattt-ggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagt 306
|||||| || ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 268 ggatttgggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggt 209
Query: 307 cacggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 208 gactcagtatatctctgatgaaccatggggatggta 173
>gb|BP631808.1|BP631808 BP631808 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-24-O07 3',
mRNA sequence
Length = 352
Score = 69.9 bits (35), Expect = 4e-010
Identities = 125/155 (80%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| || || ||||||||||| ||||| ||||| || | ||| | |||
Sbjct: 307 tgggtcaactgctctcaaccatgcttctgccaagctccatggggtggaaccaaacccagt 248
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| ||||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 247 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 188
Query: 308 acggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 187 actcagtatatctctgatgaaccatggggatggta 153
>gb|BP655656.1|BP655656 BP655656 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-22-I23 3',
mRNA sequence
Length = 374
Score = 69.9 bits (35), Expect = 4e-010
Identities = 125/155 (80%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| | |||
Sbjct: 322 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacccagt 263
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| ||||| | |||||| |||| |||| |||||| |||| || || || ||
Sbjct: 262 ggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaaccaggtg 203
Query: 308 acggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 202 actcagtatatctctgatgaaccatggggatggta 168
>gb|AV537751.1|AV537751 AV537751 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ102f06F 3', mRNA sequence
Length = 366
Score = 63.9 bits (32), Expect = 3e-008
Identities = 110/136 (80%)
Strand = Plus / Minus
Query: 171 ttgatgctggaattatctgggtaaactgctcacagccctgcttctgccaggctccctggg 230
|||| ||||| ||| ||||| | |||||||||||||| ||||| ||| || || ||||
Sbjct: 321 ttgaagctgggattgtctggattaactgctcacagccttgctttacccaagccccatggg 262
Query: 231 gcggtaacaagcgtagtggatttggacgtgagcttggagaagggggcattgataactacc 290
| ||| ||| || ||||| |||||||| || ||||||||| |||| |||||||||||
Sbjct: 261 gtggtgtcaaacgcagtgggtttggacgagaacttggagaatggggacttgataactact 202
Query: 291 tgagcgtcaagcaagt 306
|||| || ||||||||
Sbjct: 201 tgagtgtgaagcaagt 186
>gb|BP632539.1|BP632539 BP632539 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-27-H17 3',
mRNA sequence
Length = 378
Score = 63.9 bits (32), Expect = 3e-008
Identities = 126/156 (80%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 313 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 254
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctga-gcgtcaagcaagt 306
|||||||| ||||| | |||||| |||| |||| |||||| ||| | || ||||| ||
Sbjct: 253 ggatttggccgtgaattgggagaatggggacttgagaactacttgaggtgtgaagcaggt 194
Query: 307 cacggagtacatctctgatgagccgtggggatggta 342
|| | || ||||||||||| || |||||||||||
Sbjct: 193 gactcactatatctctgatgaaccatggggatggta 158
>gb|AV786136.1|AV786136 AV786136 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-69-N24 3',
mRNA sequence
Length = 413
Score = 61.9 bits (31), Expect = 1e-007
Identities = 124/155 (80%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||| ||| ||||| ||||| || | ||| | |||
Sbjct: 295 tgggtcaactgctctcagccatgcttctcccaagctccatggggtggaaccaaacccagt 236
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| | ||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 235 ggatttggccctgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 176
Query: 308 acggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 175 actcagtatatctctgatgaaccatggggatggta 141
>gb|BP636272.1|BP636272 BP636272 RAFL18 Arabidopsis thaliana cDNA clone RAFL18-03-P16 3',
mRNA sequence
Length = 445
Score = 61.9 bits (31), Expect = 1e-007
Identities = 124/155 (80%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| || || ||||||||||| ||||| ||||| || | ||| | |||
Sbjct: 324 tgggtcaactgctctcaaccatgcttctgccaagctccatggggtggaaccaaacccagt 265
Query: 248 ggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagcaagtc 307
|||||||| | ||| | |||||| |||| |||| |||||| |||| || ||||| ||
Sbjct: 264 ggatttggccctgaattgggagaatggggacttgagaactacttgagtgtgaagcaggtg 205
Query: 308 acggagtacatctctgatgagccgtggggatggta 342
|| |||| ||||||||||| || |||||||||||
Sbjct: 204 actcagtatatctctgatgaaccatggggatggta 170
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 60.0 bits (30), Expect = 4e-007
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 17750662 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 17750603
Query: 248 ggatttggacgtga 261
|||||||| |||||
Sbjct: 17750602 ggatttggccgtga 17750589
Score = 46.1 bits (23), Expect = 0.006
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 8 tcaatggaaatttggagggaggaagtcttcggtcc 42
||||||||||| ||||| ||||||||||| |||||
Sbjct: 17751028 tcaatggaaatctggagagaggaagtctttggtcc 17750994
Score = 40.1 bits (20), Expect = 0.38
Identities = 53/64 (82%)
Strand = Plus / Minus
Query: 279 ttgataactacctgagcgtcaagcaagtcacggagtacatctctgatgagccgtggggat 338
|||| |||||| |||| || ||||| || || |||| ||||||||||| || |||||||
Sbjct: 17750422 ttgagaactacttgagtgtgaagcaggtgactcagtatatctctgatgaaccatggggat 17750363
Query: 339 ggta 342
||||
Sbjct: 17750362 ggta 17750359
>emb|AL096856.1|ATT24C20 Arabidopsis thaliana DNA chromosome 3, BAC clone T24C20
Length = 103889
Score = 60.0 bits (30), Expect = 4e-007
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 20328 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 20269
Query: 248 ggatttggacgtga 261
|||||||| |||||
Sbjct: 20268 ggatttggccgtga 20255
Score = 46.1 bits (23), Expect = 0.006
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 8 tcaatggaaatttggagggaggaagtcttcggtcc 42
||||||||||| ||||| ||||||||||| |||||
Sbjct: 20694 tcaatggaaatctggagagaggaagtctttggtcc 20660
Score = 40.1 bits (20), Expect = 0.38
Identities = 53/64 (82%)
Strand = Plus / Minus
Query: 279 ttgataactacctgagcgtcaagcaagtcacggagtacatctctgatgagccgtggggat 338
|||| |||||| |||| || ||||| || || |||| ||||||||||| || |||||||
Sbjct: 20088 ttgagaactacttgagtgtgaagcaggtgactcagtatatctctgatgaaccatggggat 20029
Query: 339 ggta 342
||||
Sbjct: 20028 ggta 20025
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 60.0 bits (30), Expect = 4e-007
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgtagt 247
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| || |||
Sbjct: 17797600 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgcagt 17797541
Query: 248 ggatttggacgtga 261
|||||||| |||||
Sbjct: 17797540 ggatttggccgtga 17797527
Score = 46.1 bits (23), Expect = 0.006
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 8 tcaatggaaatttggagggaggaagtcttcggtcc 42
||||||||||| ||||| ||||||||||| |||||
Sbjct: 17797966 tcaatggaaatctggagagaggaagtctttggtcc 17797932
Score = 40.1 bits (20), Expect = 0.38
Identities = 53/64 (82%)
Strand = Plus / Minus
Query: 279 ttgataactacctgagcgtcaagcaagtcacggagtacatctctgatgagccgtggggat 338
|||| |||||| |||| || ||||| || || |||| ||||||||||| || |||||||
Sbjct: 17797360 ttgagaactacttgagtgtgaagcaggtgactcagtatatctctgatgaaccatggggat 17797301
Query: 339 ggta 342
||||
Sbjct: 17797300 ggta 17797297
>emb|BX823398.1|CNS0A7FR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS32ZE05 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1648
Score = 58.0 bits (29), Expect = 2e-006
Identities = 96/117 (82%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 188 tgggtaaactgctcacagccctgcttctgccaggctccctggggcggtaacaagcgt-ag 246
||||| |||||||| ||||| ||||||||||| ||||| ||||| || | ||| ||| ||
Sbjct: 1362 tgggtcaactgctctcagccatgcttctgccaagctccatggggtggaaccaaacgtcag 1421
Query: 247 tggatttggacgtgagcttggagaagggggcattgataactacctgagcgtcaagca 303
||||||||| ||||| | |||||| |||| |||| |||||| |||| || |||||
Sbjct: 1422 tggatttggccgtgaattgggagaatggggacttgagaactacttgagtgtgaagca 1478
Score = 46.1 bits (23), Expect = 0.006
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 8 tcaatggaaatttggagggaggaagtcttcggtcc 42
||||||||||| ||||| ||||||||||| |||||
Sbjct: 1182 tcaatggaaatctggagagaggaagtctttggtcc 1216
>gb|AV789345.1|AV789345 AV789345 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-83-E12 3',
mRNA sequence
Length = 426
Score = 56.0 bits (28), Expect = 6e-006
Identities = 109/136 (80%)
Strand = Plus / Minus
Query: 171 ttgatgctggaattatctgggtaaactgctcacagccctgcttctgccaggctccctggg 230
|||| ||||| ||| ||||| | |||||||| ||||| ||||| ||| || || ||||
Sbjct: 335 ttgaagctgggattgtctggattaactgctcgcagccttgctttacccaagccccatggg 276
Query: 231 gcggtaacaagcgtagtggatttggacgtgagcttggagaagggggcattgataactacc 290
| ||| ||| || ||||| |||||||| || ||||||||| |||| |||||||||||
Sbjct: 275 gtggtgtcaaacgcagtgggtttggacgagaacttggagaatggggacttgataactact 216
Query: 291 tgagcgtcaagcaagt 306
|||| || ||||||||
Sbjct: 215 tgagtgtgaagcaagt 200
>gb|AV792807.1|AV792807 AV792807 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-16-L22 3',
mRNA sequence
Length = 444
Score = 56.0 bits (28), Expect = 6e-006
Identities = 109/136 (80%)
Strand = Plus / Minus
Query: 171 ttgatgctggaattatctgggtaaactgctcacagccctgcttctgccaggctccctggg 230
|||| ||||| ||| ||||| | |||||||| ||||| ||||| ||| || || ||||
Sbjct: 336 ttgaagctgggattgtctggattaactgctcgcagccttgctttacccaagccccatggg 277
Query: 231 gcggtaacaagcgtagtggatttggacgtgagcttggagaagggggcattgataactacc 290
| ||| ||| || ||||| |||||||| || ||||||||| |||| |||||||||||
Sbjct: 276 gtggtgtcaaacgcagtgggtttggacgagaacttggagaatggggacttgataactact 217
Query: 291 tgagcgtcaagcaagt 306
|||| || ||||||||
Sbjct: 216 tgagtgtgaagcaagt 201
>gb|AV800211.1|AV800211 AV800211 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-23-D11 3',
mRNA sequence
Length = 394
Score = 56.0 bits (28), Expect = 6e-006
Identities = 109/136 (80%)
Strand = Plus / Minus
Query: 171 ttgatgctggaattatctgggtaaactgctcacagccctgcttctgccaggctccctggg 230
|||| ||||| ||| ||||| | |||||||| ||||| ||||| ||| || || ||||
Sbjct: 336 ttgaagctgggattttctggattaactgctcgcagccttgctttacccaagccccatggg 277
Query: 231 gcggtaacaagcgtagtggatttggacgtgagcttggagaagggggcattgataactacc 290
| ||| ||| || ||||| |||||||| || ||||||||| |||| |||||||||||
Sbjct: 276 gtggtgtcaaacgcagtgggtttggacgagaacttggagaatggggacttgataactact 217
Query: 291 tgagcgtcaagcaagt 306
|||| || ||||||||
Sbjct: 216 tgagtgtgaagcaagt 201
>gb|AV518932.1|AV518932 AV518932 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD44b05F 3', mRNA
sequence
Length = 576
Score = 56.0 bits (28), Expect = 6e-006
Identities = 109/136 (80%)
Strand = Plus / Minus
Query: 171 ttgatgctggaattatctgggtaaactgctcacagccctgcttctgccaggctccctggg 230
|||| ||||| ||| ||||| | |||||||| ||||| ||||| ||| || || ||||
Sbjct: 338 ttgaagctgggattgtctggattaactgctcgcagccttgctttacccaagccccatggg 279
Query: 231 gcggtaacaagcgtagtggatttggacgtgagcttggagaagggggcattgataactacc 290
| ||| ||| || ||||| |||||||| || ||||||||| |||| |||||||||||
Sbjct: 278 gtggtgtcaaacgcagtgggtttggacgagaacttggagaatggggacttgataactact 219
Query: 291 tgagcgtcaagcaagt 306
|||| || ||||||||
Sbjct: 218 tgagtgtgaagcaagt 203
>gb|BP575980.1|BP575980 BP575980 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-14-P07 3',
mRNA sequence
Length = 428
Score = 56.0 bits (28), Expect = 6e-006
Identities = 109/136 (80%)
Strand = Plus / Minus
Query: 171 ttgatgctggaattatctgggtaaactgctcacagccctgcttctgccaggctccctggg 230
|||| ||||| ||| ||||| | |||||||| ||||| ||||| ||| || || ||||
Sbjct: 336 ttgaagctgggattgtctggattaactgctcgcagccttgctttacccaagccccatggg 277
Query: 231 gcggtaacaagcgtagtggatttggacgtgagcttggagaagggggcattgataactacc 290
| ||| ||| || ||||| |||||||| || ||||||||| |||| |||||||||||
Sbjct: 276 gtggtgtcaaacgcagtgggtttggacgagaacttggagaatggggacttgataactact 217
Query: 291 tgagcgtcaagcaagt 306
|||| || ||||||||
Sbjct: 216 tgagtgtgaagcaagt 201
>gb|BP581524.1|BP581524 BP581524 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-32-E24 3',
mRNA sequence
Length = 460
Score = 56.0 bits (28), Expect = 6e-006
Identities = 109/136 (80%)
Strand = Plus / Minus
Query: 171 ttgatgctggaattatctgggtaaactgctcacagccctgcttctgccaggctccctggg 230
|||| ||||| ||| ||||| | |||||||| ||||| ||||| ||| || || ||||
Sbjct: 354 ttgaagctgggattgtctggattaactgctcgcagccttgctttacccaagccccatggg 295
Query: 231 gcggtaacaagcgtagtggatttggacgtgagcttggagaagggggcattgataactacc 290
| ||| ||| || ||||| |||||||| || ||||||||| |||| |||||||||||
Sbjct: 294 gtggtgtcaaacgcagtgggtttggacgagaacttggagaatggggacttgataactact 235
Query: 291 tgagcgtcaagcaagt 306
|||| || ||||||||
Sbjct: 234 tgagtgtgaagcaagt 219
>gb|BP597919.1|BP597919 BP597919 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-01-I03 3',
mRNA sequence
Length = 409
Score = 56.0 bits (28), Expect = 6e-006
Identities = 109/136 (80%)
Strand = Plus / Minus
Query: 171 ttgatgctggaattatctgggtaaactgctcacagccctgcttctgccaggctccctggg 230
|||| ||||| ||| ||||| | |||||||| ||||| ||||| ||| || || ||||
Sbjct: 335 ttgaagctgggattgtctggattaactgctcgcagccttgctttacccaagccccatggg 276
Query: 231 gcggtaacaagcgtagtggatttggacgtgagcttggagaagggggcattgataactacc 290
| ||| ||| || ||||| |||||||| || ||||||||| |||| |||||||||||
Sbjct: 275 gtggtgtcaaacgcagtgggtttggacgagaacttggagaatggggacttgataactact 216
Query: 291 tgagcgtcaagcaagt 306
|||| || ||||||||
Sbjct: 215 tgagtgtgaagcaagt 200
>gb|BP598322.1|BP598322 BP598322 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-03-A05 3',
mRNA sequence
Length = 429
Score = 56.0 bits (28), Expect = 6e-006
Identities = 109/136 (80%)
Strand = Plus / Minus
Query: 171 ttgatgctggaattatctgggtaaactgctcacagccctgcttctgccaggctccctggg 230
|||| ||||| ||| ||||| | |||||||| ||||| ||||| ||| || || ||||
Sbjct: 337 ttgaagctgggattgtctggattaactgctcgcagccttgctttacccaagccccatggg 278
Query: 231 gcggtaacaagcgtagtggatttggacgtgagcttggagaagggggcattgataactacc 290
| ||| ||| || ||||| |||||||| || ||||||||| |||| |||||||||||
Sbjct: 277 gtggtgtcaaacgcagtgggtttggacgagaacttggagaatggggacttgataactact 218
Query: 291 tgagcgtcaagcaagt 306
|||| || ||||||||
Sbjct: 217 tgagtgtgaagcaagt 202
>gb|BP599421.1|BP599421 BP599421 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-07-D14 3',
mRNA sequence
Length = 344
Score = 56.0 bits (28), Expect = 6e-006
Identities = 109/136 (80%)
Strand = Plus / Minus
Query: 171 ttgatgctggaattatctgggtaaactgctcacagccctgcttctgccaggctccctggg 230
|||| ||||| ||| ||||| | |||||||| ||||| ||||| ||| || || ||||
Sbjct: 336 ttgaagctgggattgtctggattaactgctcccagccttgctttacccaagccccatggg 277
Query: 231 gcggtaacaagcgtagtggatttggacgtgagcttggagaagggggcattgataactacc 290
| ||| ||| || ||||| |||||||| || ||||||||| |||| |||||||||||
Sbjct: 276 gtggtgtcaaacgcagtgggtttggacgagaacttggagaatggggacttgataactact 217
Query: 291 tgagcgtcaagcaagt 306
|||| || ||||||||
Sbjct: 216 tgagtgtgaagcaagt 201
>gb|BP601244.1|BP601244 BP601244 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-49-E20 3',
mRNA sequence
Length = 436
Score = 56.0 bits (28), Expect = 6e-006
Identities = 109/136 (80%)
Strand = Plus / Minus
Query: 171 ttgatgctggaattatctgggtaaactgctcacagccctgcttctgccaggctccctggg 230
|||| ||||| ||| ||||| | |||||||| ||||| ||||| ||| || || ||||
Sbjct: 335 ttgaagctgggattgtctggattaactgctcgcagccttgctttacccaagccccatggg 276
Query: 231 gcggtaacaagcgtagtggatttggacgtgagcttggagaagggggcattgataactacc 290
| ||| ||| || ||||| |||||||| || ||||||||| |||| |||||||||||
Sbjct: 275 gtggtgtcaaacgcagtgggtttggacgagaacttggagaatggggacttgataactact 216
Query: 291 tgagcgtcaagcaagt 306
|||| || ||||||||
Sbjct: 215 tgagtgtgaagcaagt 200
>gb|BP650560.1|BP650560 BP650560 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-84-M13 3',
mRNA sequence
Length = 412
Score = 56.0 bits (28), Expect = 6e-006
Identities = 109/136 (80%)
Strand = Plus / Minus
Query: 171 ttgatgctggaattatctgggtaaactgctcacagccctgcttctgccaggctccctggg 230
|||| ||||| ||| ||||| | |||||||| ||||| ||||| ||| || || ||||
Sbjct: 336 ttgaagctgggattgtctggattaactgctcccagccttgctttacccaagccccatggg 277
Query: 231 gcggtaacaagcgtagtggatttggacgtgagcttggagaagggggcattgataactacc 290
| ||| ||| || ||||| |||||||| || ||||||||| |||| |||||||||||
Sbjct: 276 gtggtgtcaaacgcagtgggtttggacgagaacttggagaatggggacttgataactact 217
Query: 291 tgagcgtcaagcaagt 306
|||| || ||||||||
Sbjct: 216 tgagtgtgaagcaagt 201
>gb|BP780945.1|BP780945 BP780945 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-75-G04 3',
mRNA sequence
Length = 386
Score = 56.0 bits (28), Expect = 6e-006
Identities = 109/136 (80%)
Strand = Plus / Minus
Query: 171 ttgatgctggaattatctgggtaaactgctcacagccctgcttctgccaggctccctggg 230
|||| ||||| ||| ||||| | |||||||| ||||| ||||| ||| || || ||||
Sbjct: 338 ttgaagctgggattgtctggattaactgctcgcagccttgctttacccaagccccatggg 279
Query: 231 gcggtaacaagcgtagtggatttggacgtgagcttggagaagggggcattgataactacc 290
| ||| ||| || ||||| |||||||| || ||||||||| |||| |||||||||||
Sbjct: 278 gtggtgtcaaacgcagtgggtttggacgagaacttggagaatggggacttgataactact 219
Query: 291 tgagcgtcaagcaagt 306
|||| || ||||||||
Sbjct: 218 tgagtgtgaagcaagt 203
>gb|BP787250.1|BP787250 BP787250 RAFL7 Arabidopsis thaliana cDNA clone RAFL26-03-J10 3',
mRNA sequence
Length = 417
Score = 56.0 bits (28), Expect = 6e-006
Identities = 109/136 (80%)
Strand = Plus / Minus
Query: 171 ttgatgctggaattatctgggtaaactgctcacagccctgcttctgccaggctccctggg 230
|||| ||||| ||| ||||| | |||||||| ||||| ||||| ||| || || ||||
Sbjct: 336 ttgaagctgggattgtctggattaactgctcgcagccttgctttacccaagccccatggg 277
Query: 231 gcggtaacaagcgtagtggatttggacgtgagcttggagaagggggcattgataactacc 290
| ||| ||| || ||||| |||||||| || ||||||||| |||| |||||||||||
Sbjct: 276 gtggtgtcaaacgcagtgggtttggacgagaacttggagaatggggacttgataactact 217
Query: 291 tgagcgtcaagcaagt 306
|||| || ||||||||
Sbjct: 216 tgagtgtgaagcaagt 201
>gb|AY093071.1| Arabidopsis thaliana similar to betaine aldehyde dehydrogenase
(At1g74920) mRNA, complete cds
Length = 1786
Score = 56.0 bits (28), Expect = 6e-006
Identities = 109/136 (80%)
Strand = Plus / Plus
Query: 171 ttgatgctggaattatctgggtaaactgctcacagccctgcttctgccaggctccctggg 230
|||| ||||| ||| ||||| | |||||||| ||||| ||||| ||| || || ||||
Sbjct: 1448 ttgaagctgggattgtctggattaactgctcgcagccttgctttacccaagccccatggg 1507
Query: 231 gcggtaacaagcgtagtggatttggacgtgagcttggagaagggggcattgataactacc 290
| ||| ||| || ||||| |||||||| || ||||||||| |||| |||||||||||
Sbjct: 1508 gtggtgtcaaacgcagtgggtttggacgagaacttggagaatggggacttgataactact 1567
Query: 291 tgagcgtcaagcaagt 306
|||| || ||||||||
Sbjct: 1568 tgagtgtgaagcaagt 1583
>gb|AY087395.1| Arabidopsis thaliana clone 34926 mRNA, complete sequence
Length = 1827
Score = 56.0 bits (28), Expect = 6e-006
Identities = 109/136 (80%)
Strand = Plus / Plus
Query: 171 ttgatgctggaattatctgggtaaactgctcacagccctgcttctgccaggctccctggg 230
|||| ||||| ||| ||||| | |||||||| ||||| ||||| ||| || || ||||
Sbjct: 1490 ttgaagctgggattgtctggattaactgctcgcagccttgctttacccaagccccatggg 1549
Query: 231 gcggtaacaagcgtagtggatttggacgtgagcttggagaagggggcattgataactacc 290
| ||| ||| || ||||| |||||||| || ||||||||| |||| |||||||||||
Sbjct: 1550 gtggtgtcaaacgcagtgggtttggacgagaacttggagaatggggacttgataactact 1609
Query: 291 tgagcgtcaagcaagt 306
|||| || ||||||||
Sbjct: 1610 tgagtgtgaagcaagt 1625
>gb|BT008872.1| Arabidopsis thaliana At1g74920 mRNA, complete cds
Length = 1506
Score = 56.0 bits (28), Expect = 6e-006
Identities = 109/136 (80%)
Strand = Plus / Plus
Query: 171 ttgatgctggaattatctgggtaaactgctcacagccctgcttctgccaggctccctggg 230
|||| ||||| ||| ||||| | |||||||| ||||| ||||| ||| || || ||||
Sbjct: 1319 ttgaagctgggattgtctggattaactgctcgcagccttgctttacccaagccccatggg 1378
Query: 231 gcggtaacaagcgtagtggatttggacgtgagcttggagaagggggcattgataactacc 290
| ||| ||| || ||||| |||||||| || ||||||||| |||| |||||||||||
Sbjct: 1379 gtggtgtcaaacgcagtgggtttggacgagaacttggagaatggggacttgataactact 1438
Query: 291 tgagcgtcaagcaagt 306
|||| || ||||||||
Sbjct: 1439 tgagtgtgaagcaagt 1454
>emb|BX814003.1|CNS0ADO4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB51ZG07 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1705
Score = 56.0 bits (28), Expect = 6e-006
Identities = 109/136 (80%)
Strand = Plus / Plus
Query: 171 ttgatgctggaattatctgggtaaactgctcacagccctgcttctgccaggctccctggg 230
|||| ||||| ||| ||||| | |||||||| ||||| ||||| ||| || || ||||
Sbjct: 1428 ttgaagctgggattgtctggattaactgctcgcagccttgctttacccaagccccatggg 1487
Query: 231 gcggtaacaagcgtagtggatttggacgtgagcttggagaagggggcattgataactacc 290
| ||| ||| || ||||| |||||||| || ||||||||| |||| |||||||||||
Sbjct: 1488 gtggtgtcaaacgcagtgggtttggacgagaacttggagaatggggacttgataactact 1547
Query: 291 tgagcgtcaagcaagt 306
|||| || ||||||||
Sbjct: 1548 tgagtgtgaagcaagt 1563
>dbj|AK220905.1| Arabidopsis thaliana mRNA for betaine aldehyde dehydrogenase like
protein, partial cds, clone: RAFL22-46-I18
Length = 498
Score = 56.0 bits (28), Expect = 6e-006
Identities = 109/136 (80%)
Strand = Plus / Plus
Query: 171 ttgatgctggaattatctgggtaaactgctcacagccctgcttctgccaggctccctggg 230
|||| ||||| ||| ||||| | |||||||| ||||| ||||| ||| || || ||||
Sbjct: 153 ttgaagctgggattgtctggattaactgctcgcagccttgctttacccaagccccatggg 212
Query: 231 gcggtaacaagcgtagtggatttggacgtgagcttggagaagggggcattgataactacc 290
| ||| ||| || ||||| |||||||| || ||||||||| |||| |||||||||||
Sbjct: 213 gtggtgtcaaacgcagtgggtttggacgagaacttggagaatggggacttgataactact 272
Query: 291 tgagcgtcaagcaagt 306
|||| || ||||||||
Sbjct: 273 tgagtgtgaagcaagt 288
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 267,048
Number of Sequences: 1013581
Number of extensions: 267048
Number of successful extensions: 17832
Number of sequences better than 0.5: 91
Number of HSP's better than 0.5 without gapping: 89
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 17458
Number of HSP's gapped (non-prelim): 369
length of query: 534
length of database: 908,940,872
effective HSP length: 20
effective length of query: 514
effective length of database: 888,669,252
effective search space: 456775995528
effective search space used: 456775995528
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)