BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3184970.2.1
(1043 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AB023459.1| Arabidopsis thaliana ChiB gene for basic en... 48 0.003
dbj|AB023460.1| Arabidopsis thaliana ChiB gene for basic en... 48 0.003
dbj|AB023461.1| Arabidopsis thaliana ChiB gene for basic en... 48 0.003
gb|AI998076.1|AI998076 701515558 A. thaliana, Columbia Col-... 42 0.19
gb|AV783706.1|AV783706 AV783706 RAFL5 Arabidopsis thaliana ... 42 0.19
gb|AV789484.1|AV789484 AV789484 RAFL6 Arabidopsis thaliana ... 42 0.19
gb|AV813307.1|AV813307 AV813307 RAFL9 Arabidopsis thaliana ... 42 0.19
gb|AV537869.1|AV537869 AV537869 Arabidopsis thaliana roots ... 42 0.19
gb|AV539681.1|AV539681 AV539681 Arabidopsis thaliana roots ... 42 0.19
gb|AV546826.1|AV546826 AV546826 Arabidopsis thaliana roots ... 42 0.19
gb|BP564385.1|BP564385 BP564385 RAFL14 Arabidopsis thaliana... 42 0.19
gb|BP569892.1|BP569892 BP569892 RAFL14 Arabidopsis thaliana... 42 0.19
gb|BP575827.1|BP575827 BP575827 RAFL14 Arabidopsis thaliana... 42 0.19
gb|BP576167.1|BP576167 BP576167 RAFL14 Arabidopsis thaliana... 42 0.19
gb|BP581105.1|BP581105 BP581105 RAFL14 Arabidopsis thaliana... 42 0.19
gb|BP583297.1|BP583297 BP583297 RAFL14 Arabidopsis thaliana... 42 0.19
gb|BP598681.1|BP598681 BP598681 RAFL16 Arabidopsis thaliana... 42 0.19
gb|BP603704.1|BP603704 BP603704 RAFL16 Arabidopsis thaliana... 42 0.19
gb|CB254573.1|CB254573 65-E018360-019-007-A17-T7R MPIZ-ADIS... 42 0.19
gb|BP793765.1|BP793765 BP793765 RAFL7 Arabidopsis thaliana ... 42 0.19
gb|M38240.1|ATHCHIB A.thaliana basic chitinase gene, comple... 42 0.19
dbj|AB023448.1| Arabidopsis thaliana ChiB gene for basic en... 42 0.19
dbj|AB023449.1| Arabidopsis thaliana ChiB gene for basic en... 42 0.19
dbj|AB023450.1| Arabidopsis thaliana ChiB gene for basic en... 42 0.19
dbj|AB023451.1| Arabidopsis thaliana ChiB gene for basic en... 42 0.19
dbj|AB023452.1| Arabidopsis thaliana ChiB gene for basic en... 42 0.19
dbj|AB023453.1| Arabidopsis thaliana ChiB gene for basic en... 42 0.19
dbj|AB023454.1| Arabidopsis thaliana ChiB gene for basic en... 42 0.19
dbj|AB023455.1| Arabidopsis thaliana ChiB gene for basic en... 42 0.19
dbj|AB023456.1| Arabidopsis thaliana ChiB gene for basic en... 42 0.19
dbj|AB023457.1| Arabidopsis thaliana ChiB gene for basic en... 42 0.19
dbj|AB023458.1| Arabidopsis thaliana ChiB gene for basic en... 42 0.19
dbj|AB023462.1| Arabidopsis thaliana ChiB gene for basic en... 42 0.19
dbj|AB023463.1| Arabidopsis thaliana ChiB gene for basic en... 42 0.19
gb|AY054628.1| Arabidopsis thaliana basic chitinase (T2E22.... 42 0.19
gb|AY081519.1| Arabidopsis thaliana basic chitinase (T2E22.... 42 0.19
emb|AX412243.1| Sequence 7 from Patent WO0222675 42 0.19
emb|AX506576.1| Sequence 1271 from Patent WO0216655 42 0.19
emb|AX589951.1| Sequence 133 from Patent WO02081695 42 0.19
emb|AX651259.1| Sequence 43 from Patent WO03000898 42 0.19
gb|AC069474.4|AC069474 Arabidopsis thaliana chromosome 3 BA... 42 0.19
emb|BX823997.1|CNS0A6TX Arabidopsis thaliana Full-length cD... 42 0.19
emb|BX824237.1|CNS0A6SH Arabidopsis thaliana Full-length cD... 42 0.19
dbj|AP001302.1| Arabidopsis thaliana genomic DNA, chromosom... 42 0.19
dbj|AP002047.1| Arabidopsis thaliana genomic DNA, chromosom... 42 0.19
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 42 0.19
ref|NM_112085.2| Arabidopsis thaliana ATHCHIB (BASIC CHITIN... 42 0.19
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 42 0.19
>dbj|AB023459.1| Arabidopsis thaliana ChiB gene for basic endochitinase, complete cds,
isolate:Ita-0
Length = 2225
Score = 48.1 bits (24), Expect = 0.003
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 465 cacgtcgtggcacgacggcttgggcggctgcgccgtcatccagaacca 512
|||| ||||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 1519 cacggcgtggcaagacggtttgggaggctgagcagtcatccagaacca 1472
>dbj|AB023460.1| Arabidopsis thaliana ChiB gene for basic endochitinase, complete cds,
isolate:Mt-0
Length = 2252
Score = 48.1 bits (24), Expect = 0.003
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 465 cacgtcgtggcacgacggcttgggcggctgcgccgtcatccagaacca 512
|||| ||||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 1543 cacggcgtggcaagacggtttgggaggctgagcagtcatccagaacca 1496
>dbj|AB023461.1| Arabidopsis thaliana ChiB gene for basic endochitinase, complete cds,
isolate:Kn-0
Length = 2258
Score = 48.1 bits (24), Expect = 0.003
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 465 cacgtcgtggcacgacggcttgggcggctgcgccgtcatccagaacca 512
|||| ||||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 1549 cacggcgtggcaagacggtttgggaggctgagcagtcatccagaacca 1502
>gb|AI998076.1|AI998076 701515558 A. thaliana, Columbia Col-0, rosette-2 Arabidopsis
thaliana cDNA clone 701515558, mRNA sequence
Length = 455
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 311 tggcaagacggtttgggaggctgagcagtcatccagaacca 351
>gb|AV783706.1|AV783706 AV783706 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-12-F22 3',
mRNA sequence
Length = 499
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 332 tggcaagacggtttgggaggctgagcagtcatccagaacca 372
>gb|AV789484.1|AV789484 AV789484 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-83-N03 3',
mRNA sequence
Length = 417
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 334 tggcaagacggtttgggaggctgagcagtcatccagaacca 374
>gb|AV813307.1|AV813307 AV813307 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-78-A20 3',
mRNA sequence
Length = 411
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 343 tggcaagacggtttgggaggctgagcagtcatccagaacca 383
>gb|AV537869.1|AV537869 AV537869 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ106a08F 3', mRNA sequence
Length = 416
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 370 tggcaagacggtttgggaggctgagcagtcatccagaacca 410
>gb|AV539681.1|AV539681 AV539681 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ137d01F 3', mRNA sequence
Length = 537
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 343 tggcaagacggtttgggaggctgagcagtcatccagaacca 383
>gb|AV546826.1|AV546826 AV546826 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL20c10F 3', mRNA sequence
Length = 462
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 349 tggcaagacggtttgggaggctgagcagtcatccagaacca 389
>gb|BP564385.1|BP564385 BP564385 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-07-H16 3',
mRNA sequence
Length = 441
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 333 tggcaagacggtttgggaggctgagcagtcatccagaacca 373
>gb|BP569892.1|BP569892 BP569892 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-70-E15 3',
mRNA sequence
Length = 414
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 334 tggcaagacggtttgggaggctgagcagtcatccagaacca 374
>gb|BP575827.1|BP575827 BP575827 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-14-F04 3',
mRNA sequence
Length = 434
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 336 tggcaagacggtttgggaggctgagcagtcatccagaacca 376
>gb|BP576167.1|BP576167 BP576167 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-15-N16 3',
mRNA sequence
Length = 465
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 331 tggcaagacggtttgggaggctgagcagtcatccagaacca 371
>gb|BP581105.1|BP581105 BP581105 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-30-H08 3',
mRNA sequence
Length = 458
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 332 tggcaagacggtttgggaggctgagcagtcatccagaacca 372
>gb|BP583297.1|BP583297 BP583297 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-40-I20 3',
mRNA sequence
Length = 442
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 332 tggcaagacggtttgggaggctgagcagtcatccagaacca 372
>gb|BP598681.1|BP598681 BP598681 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-04-E17 3',
mRNA sequence
Length = 424
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 343 tggcaagacggtttgggaggctgagcagtcatccagaacca 383
>gb|BP603704.1|BP603704 BP603704 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-59-L20 3',
mRNA sequence
Length = 385
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 336 tggcaagacggtttgggaggctgagcagtcatccagaacca 376
>gb|CB254573.1|CB254573 65-E018360-019-007-A17-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768A177Q 5-PRIME, mRNA sequence
Length = 551
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 351 tggcaagacggtttgggaggctgagcagtcatccagaacca 311
>gb|BP793765.1|BP793765 BP793765 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-57-J22 3',
mRNA sequence
Length = 413
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 333 tggcaagacggtttgggaggctgagcagtcatccagaacca 373
>gb|M38240.1|ATHCHIB A.thaliana basic chitinase gene, complete cds
Length = 2700
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 1923 tggcaagacggtttgggaggctgagcagtcatccagaacca 1883
>dbj|AB023448.1| Arabidopsis thaliana ChiB gene for basic endochitinase, complete cds,
isolate:Aa-0
Length = 2239
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 1521 tggcaagacggtttgggaggctgagcagtcatccagaacca 1481
>dbj|AB023449.1| Arabidopsis thaliana ChiB gene for basic endochitinase, complete cds,
isolate:Bla-10
Length = 2239
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 1521 tggcaagacggtttgggaggctgagcagtcatccagaacca 1481
>dbj|AB023450.1| Arabidopsis thaliana ChiB gene for basic endochitinase, complete cds,
isolate:Bs-1
Length = 2247
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 1529 tggcaagacggtttgggaggctgagcagtcatccagaacca 1489
>dbj|AB023451.1| Arabidopsis thaliana ChiB gene for basic endochitinase, complete cds,
isolate:Hiroshima
Length = 2243
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 1525 tggcaagacggtttgggaggctgagcagtcatccagaacca 1485
>dbj|AB023452.1| Arabidopsis thaliana ChiB gene for basic endochitinase, complete cds,
isolate:Bl-1
Length = 2239
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 1521 tggcaagacggtttgggaggctgagcagtcatccagaacca 1481
>dbj|AB023453.1| Arabidopsis thaliana ChiB gene for basic endochitinase, complete cds,
isolate:Es-0
Length = 2243
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 1525 tggcaagacggtttgggaggctgagcagtcatccagaacca 1485
>dbj|AB023454.1| Arabidopsis thaliana ChiB gene for basic endochitinase, complete cds,
isolate:Gr-1
Length = 2247
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 1529 tggcaagacggtttgggaggctgagcagtcatccagaacca 1489
>dbj|AB023455.1| Arabidopsis thaliana ChiB gene for basic endochitinase, complete cds,
isolate:Shokei
Length = 2249
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 1531 tggcaagacggtttgggaggctgagcagtcatccagaacca 1491
>dbj|AB023456.1| Arabidopsis thaliana ChiB gene for basic endochitinase, complete cds,
isolate:Yo-0
Length = 2227
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 1509 tggcaagacggtttgggaggctgagcagtcatccagaacca 1469
>dbj|AB023457.1| Arabidopsis thaliana ChiB gene for basic endochitinase, complete cds,
isolate:Al-0
Length = 2243
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 1525 tggcaagacggtttgggaggctgagcagtcatccagaacca 1485
>dbj|AB023458.1| Arabidopsis thaliana ChiB gene for basic endochitinase, complete cds,
isolate:Chi-0
Length = 2237
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 1519 tggcaagacggtttgggaggctgagcagtcatccagaacca 1479
>dbj|AB023462.1| Arabidopsis thaliana ChiB gene for basic endochitinase, complete cds,
isolate:Ci-0
Length = 2210
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 1499 tggcaagacggtttgggaggctgagcagtcatccagaacca 1459
>dbj|AB023463.1| Arabidopsis thaliana ChiB gene for basic endochitinase, complete cds,
isolate:Pog-0
Length = 2210
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 1499 tggcaagacggtttgggaggctgagcagtcatccagaacca 1459
>gb|AY054628.1| Arabidopsis thaliana basic chitinase (T2E22.18) mRNA, complete cds
Length = 1066
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 736 tggcaagacggtttgggaggctgagcagtcatccagaacca 696
>gb|AY081519.1| Arabidopsis thaliana basic chitinase (T2E22.18) mRNA, complete cds
Length = 1019
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 719 tggcaagacggtttgggaggctgagcagtcatccagaacca 679
>emb|AX412243.1| Sequence 7 from Patent WO0222675
Length = 1008
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 758 tggcaagacggtttgggaggctgagcagtcatccagaacca 718
>emb|AX506576.1| Sequence 1271 from Patent WO0216655
Length = 1008
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 758 tggcaagacggtttgggaggctgagcagtcatccagaacca 718
>emb|AX589951.1| Sequence 133 from Patent WO02081695
Length = 1008
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 758 tggcaagacggtttgggaggctgagcagtcatccagaacca 718
>emb|AX651259.1| Sequence 43 from Patent WO03000898
Length = 1008
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 758 tggcaagacggtttgggaggctgagcagtcatccagaacca 718
>gb|AC069474.4|AC069474 Arabidopsis thaliana chromosome 3 BAC T2E22 genomic sequence, complete
sequence
Length = 105768
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 65043 tggcaagacggtttgggaggctgagcagtcatccagaacca 65003
>emb|BX823997.1|CNS0A6TX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH12ZH12 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 998
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 713 tggcaagacggtttgggaggctgagcagtcatccagaacca 673
>emb|BX824237.1|CNS0A6SH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH31ZH03 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1008
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 710 tggcaagacggtttgggaggctgagcagtcatccagaacca 670
>dbj|AP001302.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K24A2
Length = 30648
Score = 42.1 bits (21), Expect = 0.19
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 71 attttgatttgatttgattta 91
|||||||||||||||||||||
Sbjct: 30359 attttgatttgatttgattta 30339
>dbj|AP002047.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MQC3
Length = 86536
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 76422 tggcaagacggtttgggaggctgagcagtcatccagaacca 76462
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 42.1 bits (21), Expect = 0.19
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 71 attttgatttgatttgattta 91
|||||||||||||||||||||
Sbjct: 10327045 attttgatttgatttgattta 10327025
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 3982977 tggcaagacggtttgggaggctgagcagtcatccagaacca 3982937
>ref|NM_112085.2| Arabidopsis thaliana ATHCHIB (BASIC CHITINASE); chitinase AT3G12500
(ATHCHIB) mRNA, complete cds
Length = 1107
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 738 tggcaagacggtttgggaggctgagcagtcatccagaacca 698
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 42.1 bits (21), Expect = 0.19
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 71 attttgatttgatttgattta 91
|||||||||||||||||||||
Sbjct: 10400301 attttgatttgatttgattta 10400281
Score = 42.1 bits (21), Expect = 0.19
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaacca 512
||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 3962758 tggcaagacggtttgggaggctgagcagtcatccagaacca 3962798
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 353,143
Number of Sequences: 1013581
Number of extensions: 353143
Number of successful extensions: 28745
Number of sequences better than 0.5: 48
Number of HSP's better than 0.5 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 28089
Number of HSP's gapped (non-prelim): 648
length of query: 1043
length of database: 908,940,872
effective HSP length: 20
effective length of query: 1023
effective length of database: 888,669,252
effective search space: 909108644796
effective search space used: 909108644796
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)