BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3070703.2.1
(1214 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY133709.1| Arabidopsis thaliana clone C103301 putative ... 131 3e-028
emb|AX506164.1| Sequence 859 from Patent WO0216655 131 3e-028
ref|NM_118165.2| Arabidopsis thaliana NAD binding / UDP-glu... 131 3e-028
gb|AV553148.1|AV553148 AV553148 Arabidopsis thaliana roots ... 105 2e-020
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 105 2e-020
gb|AF325108.1|AF325108 Arabidopsis thaliana unknown protein... 105 2e-020
gb|AY070487.1| Arabidopsis thaliana At2g34850/F19I3.8 mRNA,... 105 2e-020
gb|AY064973.1| Arabidopsis thaliana At1g30620/T5I8_7 mRNA, ... 105 2e-020
emb|AX506245.1| Sequence 940 from Patent WO0216655 105 2e-020
gb|BT002614.1| Arabidopsis thaliana At1g30620/T5I8_7 mRNA, ... 105 2e-020
gb|AY195742.1| Arabidopsis thaliana UDP-D-xylose 4-epimeras... 105 2e-020
emb|AX651855.1| Sequence 721 from Patent WO03000898 105 2e-020
gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5... 105 2e-020
ref|NM_179907.1| Arabidopsis thaliana NAD binding / catalyt... 105 2e-020
ref|NM_102799.4| Arabidopsis thaliana MUR4 (MURUS 4); catal... 105 2e-020
ref|NM_001036041.1| Arabidopsis thaliana MUR4 (MURUS 4); ca... 105 2e-020
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 105 2e-020
gb|AF083751.1| Arabidopsis thaliana clone sps542 unknown mRNA 98 4e-018
ref|NM_123815.1| Arabidopsis thaliana DUR (DEFECTIVE UGE IN... 92 3e-016
gb|AC004238.3| Arabidopsis thaliana chromosome 2 clone F19I... 88 4e-015
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 88 4e-015
emb|AL080253.2|ATF9F13 Arabidopsis thaliana DNA chromosome ... 88 4e-015
emb|AL161553.2|ATCHRIV53 Arabidopsis thaliana DNA chromosom... 88 4e-015
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 88 4e-015
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 88 4e-015
emb|BX815256.1|CNS0AAN9 Arabidopsis thaliana Full-length cD... 86 2e-014
gb|AY091699.1| Arabidopsis thaliana At2g34850/F19I3.8 mRNA,... 78 4e-012
dbj|AK220800.1| Arabidopsis thaliana mRNA for UDP-galactose... 78 4e-012
dbj|AB017065.1| Arabidopsis thaliana genomic DNA, chromosom... 66 2e-008
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 66 2e-008
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 66 2e-008
gb|CL488579.1|CL488579 SAIL_511_B08.v1 SAIL Collection Arab... 64 6e-008
gb|BP840233.1|BP840233 BP840233 RAFL19 Arabidopsis thaliana... 64 6e-008
gb|CC055840.1|CC055840 SALK_097720.30.80.x Arabidopsis thal... 60 9e-007
gb|B12819.1|B12819 T12E9-T7 TAMU Arabidopsis thaliana genom... 56 1e-005
gb|B28207.1|B28207 T5A21TRB TAMU Arabidopsis thaliana genom... 56 1e-005
gb|AA597338.1|AA597338 29609 Lambda-PRL2 Arabidopsis thalia... 56 1e-005
gb|BH758606.1|BH758606 SALK_028357.56.00.x Arabidopsis thal... 54 6e-005
gb|BZ662340.1|BZ662340 SALK_025826.50.25.x Arabidopsis thal... 50 0.001
>gb|AY133709.1| Arabidopsis thaliana clone C103301 putative UDP-glucose 4-epimerase
protein (At4g20460) mRNA, complete cds
Length = 1171
Score = 131 bits (66), Expect = 3e-028
Identities = 147/174 (84%)
Strand = Plus / Minus
Query: 1033 aatgtgttcgatgttatgttgtggtagtacctgagtggctccattgtgctctcaccaaca 1092
|||||||| ||||| ||||||||||| ||| | || || || | |||||||| ||||||
Sbjct: 431 aatgtgtttgatgtaatgttgtggtaatactttagaggatctagagtgctctctccaaca 372
Query: 1093 taagcaacagcagcaaagtgcataacagcgtcaaatgcattctccgaaaatattttcttc 1152
|| || || |||||||| ||||||||||| ||||| || ||||| || || ||||| |
Sbjct: 371 tatgctactgcagcaaaatgcataacagcatcaaacgcgttctctgagaagattttatca 312
Query: 1153 acagctttggcatcgcctaagtcagcataaataaactgaagccttccgggttct 1206
|||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 311 acagctttggcatctcctaagtcagcataaataaattgaagcctcccgggttct 258
Score = 91.7 bits (46), Expect = 3e-016
Identities = 106/126 (84%)
Strand = Plus / Minus
Query: 711 agctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagc 770
||||||||| || || ||||| || |||||||| || || |||||||| ||| |||||||
Sbjct: 744 agctgcatcgaaacaggcacccgaaatccgtccgtgttcacgtagctcgggctttggagc 685
Query: 771 ttctcctagccgtccctctgggtctgatccaatcacgttgaagtatcttaagatcatgac 830
||||||||| | || ||||| ||||| || |||||||| |||||||||| |||||||||
Sbjct: 684 ttctcctagtctaccttctggatctgaacctatcacgttaaagtatcttaggatcatgac 625
Query: 831 agccat 836
|||||
Sbjct: 624 tgccat 619
Score = 87.7 bits (44), Expect = 4e-015
Identities = 128/156 (82%)
Strand = Plus / Minus
Query: 505 ttcttgcaagcttctacaaactcagtcactgatctaccttggcctgttccgacattgtag 564
||||| || ||||| |||||||| |||| ||||| |||| ||||| || ||||||||
Sbjct: 950 ttcttacatgcttccacaaactctttcaccgatcttccttttcctgtacctacattgtat 891
Query: 565 attccaactttgcctggctgagctttaccaagagcttttacgtgagcatctacaagatct 624
||||| || || | |||| |||||| | |||||||||||||||||||||||||| ||
Sbjct: 890 attcccacatttctaggcttagctttctcgagagcttttacgtgagcatctacaaggtca 831
Query: 625 gtgacatcgatgtagtctctaacgcaagttccatct 660
|| ||||| |||||||| | ||| ||||||||||||
Sbjct: 830 gtaacatctatgtagtcacgaacacaagttccatct 795
>emb|AX506164.1| Sequence 859 from Patent WO0216655
Length = 1140
Score = 131 bits (66), Expect = 3e-028
Identities = 147/174 (84%)
Strand = Plus / Minus
Query: 1033 aatgtgttcgatgttatgttgtggtagtacctgagtggctccattgtgctctcaccaaca 1092
|||||||| ||||| ||||||||||| ||| | || || || | |||||||| ||||||
Sbjct: 431 aatgtgtttgatgtaatgttgtggtaatactttagaggatctagagtgctctctccaaca 372
Query: 1093 taagcaacagcagcaaagtgcataacagcgtcaaatgcattctccgaaaatattttcttc 1152
|| || || |||||||| ||||||||||| ||||| || ||||| || || ||||| |
Sbjct: 371 tatgctactgcagcaaaatgcataacagcatcaaacgcgttctctgagaagattttatca 312
Query: 1153 acagctttggcatcgcctaagtcagcataaataaactgaagccttccgggttct 1206
|||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 311 acagctttggcatctcctaagtcagcataaataaattgaagcctcccgggttct 258
Score = 91.7 bits (46), Expect = 3e-016
Identities = 106/126 (84%)
Strand = Plus / Minus
Query: 711 agctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagc 770
||||||||| || || ||||| || |||||||| || || |||||||| ||| |||||||
Sbjct: 744 agctgcatcgaaacaggcacccgaaatccgtccgtgttcacgtagctcgggctttggagc 685
Query: 771 ttctcctagccgtccctctgggtctgatccaatcacgttgaagtatcttaagatcatgac 830
||||||||| | || ||||| ||||| || |||||||| |||||||||| |||||||||
Sbjct: 684 ttctcctagtctaccttctggatctgaacctatcacgttaaagtatcttaggatcatgac 625
Query: 831 agccat 836
|||||
Sbjct: 624 tgccat 619
Score = 87.7 bits (44), Expect = 4e-015
Identities = 128/156 (82%)
Strand = Plus / Minus
Query: 505 ttcttgcaagcttctacaaactcagtcactgatctaccttggcctgttccgacattgtag 564
||||| || ||||| |||||||| |||| ||||| |||| ||||| || ||||||||
Sbjct: 950 ttcttacatgcttccacaaactctttcaccgatcttccttttcctgtacctacattgtat 891
Query: 565 attccaactttgcctggctgagctttaccaagagcttttacgtgagcatctacaagatct 624
||||| || || | |||| |||||| | |||||||||||||||||||||||||| ||
Sbjct: 890 attcccacatttctaggcttagctttctcgagagcttttacgtgagcatctacaaggtca 831
Query: 625 gtgacatcgatgtagtctctaacgcaagttccatct 660
|| ||||| |||||||| | ||| ||||||||||||
Sbjct: 830 gtaacatctatgtagtcacgaacacaagttccatct 795
>ref|NM_118165.2| Arabidopsis thaliana NAD binding / UDP-glucose 4-epimerase/ catalytic
AT4G20460 mRNA, complete cds
Length = 1171
Score = 131 bits (66), Expect = 3e-028
Identities = 147/174 (84%)
Strand = Plus / Minus
Query: 1033 aatgtgttcgatgttatgttgtggtagtacctgagtggctccattgtgctctcaccaaca 1092
|||||||| ||||| ||||||||||| ||| | || || || | |||||||| ||||||
Sbjct: 431 aatgtgtttgatgtaatgttgtggtaatactttagaggatctagagtgctctctccaaca 372
Query: 1093 taagcaacagcagcaaagtgcataacagcgtcaaatgcattctccgaaaatattttcttc 1152
|| || || |||||||| ||||||||||| ||||| || ||||| || || ||||| |
Sbjct: 371 tatgctactgcagcaaaatgcataacagcatcaaacgcgttctctgagaagattttatca 312
Query: 1153 acagctttggcatcgcctaagtcagcataaataaactgaagccttccgggttct 1206
|||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 311 acagctttggcatctcctaagtcagcataaataaattgaagcctcccgggttct 258
Score = 91.7 bits (46), Expect = 3e-016
Identities = 106/126 (84%)
Strand = Plus / Minus
Query: 711 agctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagc 770
||||||||| || || ||||| || |||||||| || || |||||||| ||| |||||||
Sbjct: 744 agctgcatcgaaacaggcacccgaaatccgtccgtgttcacgtagctcgggctttggagc 685
Query: 771 ttctcctagccgtccctctgggtctgatccaatcacgttgaagtatcttaagatcatgac 830
||||||||| | || ||||| ||||| || |||||||| |||||||||| |||||||||
Sbjct: 684 ttctcctagtctaccttctggatctgaacctatcacgttaaagtatcttaggatcatgac 625
Query: 831 agccat 836
|||||
Sbjct: 624 tgccat 619
Score = 87.7 bits (44), Expect = 4e-015
Identities = 128/156 (82%)
Strand = Plus / Minus
Query: 505 ttcttgcaagcttctacaaactcagtcactgatctaccttggcctgttccgacattgtag 564
||||| || ||||| |||||||| |||| ||||| |||| ||||| || ||||||||
Sbjct: 950 ttcttacatgcttccacaaactctttcaccgatcttccttttcctgtacctacattgtat 891
Query: 565 attccaactttgcctggctgagctttaccaagagcttttacgtgagcatctacaagatct 624
||||| || || | |||| |||||| | |||||||||||||||||||||||||| ||
Sbjct: 890 attcccacatttctaggcttagctttctcgagagcttttacgtgagcatctacaaggtca 831
Query: 625 gtgacatcgatgtagtctctaacgcaagttccatct 660
|| ||||| |||||||| | ||| ||||||||||||
Sbjct: 830 gtaacatctatgtagtcacgaacacaagttccatct 795
>gb|AV553148.1|AV553148 AV553148 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ55b05R 5', mRNA sequence
Length = 568
Score = 105 bits (53), Expect = 2e-020
Identities = 110/129 (85%)
Strand = Plus / Minus
Query: 1077 tgtgctctcaccaacataagcaacagcagcaaagtgcataacagcgtcaaatgcattctc 1136
|||||| || |||||||| ||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 141 tgtgctttccccaacatatgcaacagcagcgaaatgcatcacagcgtcaaaggcattctc 82
Query: 1137 cgaaaatattttcttcacagctttggcatcgcctaagtcagcataaataaactgaagcct 1196
| ||||| || || |||||||||||||| || | |||||||||||||| ||||||||
Sbjct: 81 tgtgaatatcttgttgacagctttggcatctccaagatcagcataaataaattgaagcct 22
Query: 1197 tccgggttc 1205
||| |||||
Sbjct: 21 tccaggttc 13
Score = 77.8 bits (39), Expect = 4e-012
Identities = 105/127 (82%)
Strand = Plus / Minus
Query: 712 gctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagct 771
||||||||||| ||||||||||| || ||||||||||| || ||||| || ||||| |||
Sbjct: 497 gctgcatcaaaacaagcaccggagatgcgtccatgctctcgcagctcaggtcttggggct 438
Query: 772 tctcctagccgtccctctgggtctgatccaatcacgttgaagtatcttaagatcatgaca 831
|| || | | |||||||| || || |||||||| ||||| ||||||| |||||| ||
Sbjct: 437 tcacccaatctgccctctggatcggacccaatcacattgaaatatcttaggatcataact 378
Query: 832 gccatat 838
|||||||
Sbjct: 377 gccatat 371
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 862 aaatctaagatgatgtcctccgccatcttctttgccttaccatatggattgat 914
||||| || ||||| || || ||||||||||| |||||||||||||| |||||
Sbjct: 356 aaatccaaaatgatatcttctgccatcttcttggccttaccatatgggttgat 304
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 105 bits (53), Expect = 2e-020
Identities = 110/129 (85%)
Strand = Plus / Minus
Query: 1077 tgtgctctcaccaacataagcaacagcagcaaagtgcataacagcgtcaaatgcattctc 1136
|||||| || |||||||| ||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 10865212 tgtgctttccccaacatatgcaacagcagcgaaatgcatcacagcgtcaaaggcattctc 10865153
Query: 1137 cgaaaatattttcttcacagctttggcatcgcctaagtcagcataaataaactgaagcct 1196
| ||||| || || |||||||||||||| || | |||||||||||||| ||||||||
Sbjct: 10865152 tgtgaatatcttgttgacagctttggcatctccaagatcagcataaataaattgaagcct 10865093
Query: 1197 tccgggttc 1205
||| |||||
Sbjct: 10865092 tccaggttc 10865084
Score = 61.9 bits (31), Expect = 2e-007
Identities = 88/107 (82%)
Strand = Plus / Minus
Query: 712 gctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagct 771
||||||||||| ||||||||||| || ||||||||||| || ||||| || ||||| |||
Sbjct: 10865824 gctgcatcaaaacaagcaccggagatgcgtccatgctctcgcagctcaggtcttggggct 10865765
Query: 772 tctcctagccgtccctctgggtctgatccaatcacgttgaagtatct 818
|| || | | |||||||| || || |||||||| ||||| |||||
Sbjct: 10865764 tcacccaatctgccctctggatcggacccaatcacattgaaatatct 10865718
Score = 56.0 bits (28), Expect = 1e-005
Identities = 85/104 (81%)
Strand = Plus / Minus
Query: 556 acattgtagattccaactttgcctggctgagctttaccaagagcttttacgtgagcatct 615
|||||||||||||||||||||| ||| | || || ||||||||| || ||||||||
Sbjct: 10866384 acattgtagattccaactttgcgtggttttgccttttgaagagctttaacatgagcatca 10866325
Query: 616 acaagatctgtgacatcgatgtagtctctaacgcaagttccatc 659
|| | ||| |||||||| ||||| || | ||||||||||||||
Sbjct: 10866324 accaaatcagtgacatcaatgtaatcccgtacgcaagttccatc 10866281
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 862 aaatctaagatgatgtcctccgccatcttctttgccttaccatatggattgat 914
||||| || ||||| || || ||||||||||| |||||||||||||| |||||
Sbjct: 10865590 aaatccaaaatgatatcttctgccatcttcttggccttaccatatgggttgat 10865538
>gb|AF325108.1|AF325108 Arabidopsis thaliana unknown protein (T5I8.7) mRNA, complete cds
Length = 1260
Score = 105 bits (53), Expect = 2e-020
Identities = 110/129 (85%)
Strand = Plus / Minus
Query: 1077 tgtgctctcaccaacataagcaacagcagcaaagtgcataacagcgtcaaatgcattctc 1136
|||||| || |||||||| ||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 486 tgtgctttccccaacatatgcaacagcagcgaaatgcatcacagcgtcaaaggcattctc 427
Query: 1137 cgaaaatattttcttcacagctttggcatcgcctaagtcagcataaataaactgaagcct 1196
| ||||| || || |||||||||||||| || | |||||||||||||| ||||||||
Sbjct: 426 tgtgaatatcttgttgacagctttggcatctccaagatcagcataaataaattgaagcct 367
Query: 1197 tccgggttc 1205
||| |||||
Sbjct: 366 tccaggttc 358
Score = 77.8 bits (39), Expect = 4e-012
Identities = 105/127 (82%)
Strand = Plus / Minus
Query: 712 gctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagct 771
||||||||||| ||||||||||| || ||||||||||| || ||||| || ||||| |||
Sbjct: 842 gctgcatcaaaacaagcaccggagatgcgtccatgctctcgcagctcaggtcttggggct 783
Query: 772 tctcctagccgtccctctgggtctgatccaatcacgttgaagtatcttaagatcatgaca 831
|| || | | |||||||| || || |||||||| ||||| ||||||| |||||| ||
Sbjct: 782 tcacccaatctgccctctggatcggacccaatcacattgaaatatcttaggatcataact 723
Query: 832 gccatat 838
|||||||
Sbjct: 722 gccatat 716
Score = 65.9 bits (33), Expect = 2e-008
Identities = 129/161 (80%)
Strand = Plus / Minus
Query: 499 gttgccttcttgcaagcttctacaaactcagtcactgatctaccttggcctgttccgaca 558
||||| |||||||| || || |||||||| |||| || ||||||| || || || |||
Sbjct: 1055 gttgctttcttgcacgcctcaacaaactctttcaccgagctacctttcccggtgccaaca 996
Query: 559 ttgtagattccaactttgcctggctgagctttaccaagagcttttacgtgagcatctaca 618
||||||||||||||||||| ||| | || || ||||||||| || |||||||| ||
Sbjct: 995 ttgtagattccaactttgcgtggttttgccttttgaagagctttaacatgagcatcaacc 936
Query: 619 agatctgtgacatcgatgtagtctctaacgcaagttccatc 659
| ||| |||||||| ||||| || | ||||||||||||||
Sbjct: 935 aaatcagtgacatcaatgtaatcccgtacgcaagttccatc 895
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 862 aaatctaagatgatgtcctccgccatcttctttgccttaccatatggattgat 914
||||| || ||||| || || ||||||||||| |||||||||||||| |||||
Sbjct: 701 aaatccaaaatgatatcttctgccatcttcttggccttaccatatgggttgat 649
>gb|AY070487.1| Arabidopsis thaliana At2g34850/F19I3.8 mRNA, complete cds
Length = 1125
Score = 105 bits (53), Expect = 2e-020
Identities = 110/129 (85%)
Strand = Plus / Minus
Query: 1077 tgtgctctcaccaacataagcaacagcagcaaagtgcataacagcgtcaaatgcattctc 1136
|||||| || ||||||||||||||||||||||| ||||| |||||||||||||| || ||
Sbjct: 195 tgtgctttctccaacataagcaacagcagcaaaatgcatcacagcgtcaaatgcgttttc 136
Query: 1137 cgaaaatattttcttcacagctttggcatcgcctaagtcagcataaataaactgaagcct 1196
||||||||||| || ||||| || ||||| || | ||||||||||| || |||||| |
Sbjct: 135 agaaaatattttgttaacagcatttgcatctccaagatcagcataaatgaattgaagctt 76
Query: 1197 tccgggttc 1205
||| |||||
Sbjct: 75 tccaggttc 67
Score = 77.8 bits (39), Expect = 4e-012
Identities = 102/123 (82%)
Strand = Plus / Minus
Query: 715 gcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagcttct 774
||||||||||||||||| || |||||||||||||| | || || || |||||||||||
Sbjct: 547 gcatcaaagcaagcaccagagatccgtccatgctcactgagttcaggtcttggagcttca 488
Query: 775 cctagccgtccctctgggtctgatccaatcacgttgaagtatcttaagatcatgacagcc 834
||||| | ||||| || || || |||||||| ||||| ||||||| |||||| || |||
Sbjct: 487 cctagtctaccctcaggatcagacccaatcacattgaaatatcttaggatcataactgcc 428
Query: 835 ata 837
|||
Sbjct: 427 ata 425
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 862 aaatctaagatgatgtcctccgccatcttctttgccttaccatatggattgat 914
||||| |||||||| || || |||||||| || ||||| ||||||||||||||
Sbjct: 409 aaatccaagatgatatcttctgccatctttttagcctttccatatggattgat 357
>gb|AY064973.1| Arabidopsis thaliana At1g30620/T5I8_7 mRNA, complete cds
Length = 1863
Score = 105 bits (53), Expect = 2e-020
Identities = 110/129 (85%)
Strand = Plus / Minus
Query: 1077 tgtgctctcaccaacataagcaacagcagcaaagtgcataacagcgtcaaatgcattctc 1136
|||||| || |||||||| ||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 822 tgtgctttccccaacatatgcaacagcagcgaaatgcatcacagcgtcaaaggcattctc 763
Query: 1137 cgaaaatattttcttcacagctttggcatcgcctaagtcagcataaataaactgaagcct 1196
| ||||| || || |||||||||||||| || | |||||||||||||| ||||||||
Sbjct: 762 tgtgaatatcttgttgacagctttggcatctccaagatcagcataaataaattgaagcct 703
Query: 1197 tccgggttc 1205
||| |||||
Sbjct: 702 tccaggttc 694
Score = 77.8 bits (39), Expect = 4e-012
Identities = 105/127 (82%)
Strand = Plus / Minus
Query: 712 gctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagct 771
||||||||||| ||||||||||| || ||||||||||| || ||||| || ||||| |||
Sbjct: 1178 gctgcatcaaaacaagcaccggagatgcgtccatgctctcgcagctcaggtcttggggct 1119
Query: 772 tctcctagccgtccctctgggtctgatccaatcacgttgaagtatcttaagatcatgaca 831
|| || | | |||||||| || || |||||||| ||||| ||||||| |||||| ||
Sbjct: 1118 tcacccaatctgccctctggatcggacccaatcacattgaaatatcttaggatcataact 1059
Query: 832 gccatat 838
|||||||
Sbjct: 1058 gccatat 1052
Score = 65.9 bits (33), Expect = 2e-008
Identities = 129/161 (80%)
Strand = Plus / Minus
Query: 499 gttgccttcttgcaagcttctacaaactcagtcactgatctaccttggcctgttccgaca 558
||||| |||||||| || || |||||||| |||| || ||||||| || || || |||
Sbjct: 1391 gttgctttcttgcacgcctcaacaaactctttcaccgagctacctttcccggtgccaaca 1332
Query: 559 ttgtagattccaactttgcctggctgagctttaccaagagcttttacgtgagcatctaca 618
||||||||||||||||||| ||| | || || ||||||||| || |||||||| ||
Sbjct: 1331 ttgtagattccaactttgcgtggttttgccttttgaagagctttaacatgagcatcaacc 1272
Query: 619 agatctgtgacatcgatgtagtctctaacgcaagttccatc 659
| ||| |||||||| ||||| || | ||||||||||||||
Sbjct: 1271 aaatcagtgacatcaatgtaatcccgtacgcaagttccatc 1231
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 862 aaatctaagatgatgtcctccgccatcttctttgccttaccatatggattgat 914
||||| || ||||| || || ||||||||||| |||||||||||||| |||||
Sbjct: 1037 aaatccaaaatgatatcttctgccatcttcttggccttaccatatgggttgat 985
>emb|AX506245.1| Sequence 940 from Patent WO0216655
Length = 1239
Score = 105 bits (53), Expect = 2e-020
Identities = 110/129 (85%)
Strand = Plus / Minus
Query: 1077 tgtgctctcaccaacataagcaacagcagcaaagtgcataacagcgtcaaatgcattctc 1136
|||||| || |||||||| ||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 465 tgtgctttccccaacatatgcaacagcagcgaaatgcatcacagcgtcaaaggcattctc 406
Query: 1137 cgaaaatattttcttcacagctttggcatcgcctaagtcagcataaataaactgaagcct 1196
| ||||| || || |||||||||||||| || | |||||||||||||| ||||||||
Sbjct: 405 tgtgaatatcttgttgacagctttggcatctccaagatcagcataaataaattgaagcct 346
Query: 1197 tccgggttc 1205
||| |||||
Sbjct: 345 tccaggttc 337
Score = 77.8 bits (39), Expect = 4e-012
Identities = 105/127 (82%)
Strand = Plus / Minus
Query: 712 gctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagct 771
||||||||||| ||||||||||| || ||||||||||| || ||||| || ||||| |||
Sbjct: 821 gctgcatcaaaacaagcaccggagatgcgtccatgctctcgcagctcaggtcttggggct 762
Query: 772 tctcctagccgtccctctgggtctgatccaatcacgttgaagtatcttaagatcatgaca 831
|| || | | |||||||| || || |||||||| ||||| ||||||| |||||| ||
Sbjct: 761 tcacccaatctgccctctggatcggacccaatcacattgaaatatcttaggatcataact 702
Query: 832 gccatat 838
|||||||
Sbjct: 701 gccatat 695
Score = 65.9 bits (33), Expect = 2e-008
Identities = 129/161 (80%)
Strand = Plus / Minus
Query: 499 gttgccttcttgcaagcttctacaaactcagtcactgatctaccttggcctgttccgaca 558
||||| |||||||| || || |||||||| |||| || ||||||| || || || |||
Sbjct: 1034 gttgctttcttgcacgcctcaacaaactctttcaccgagctacctttcccggtgccaaca 975
Query: 559 ttgtagattccaactttgcctggctgagctttaccaagagcttttacgtgagcatctaca 618
||||||||||||||||||| ||| | || || ||||||||| || |||||||| ||
Sbjct: 974 ttgtagattccaactttgcgtggttttgccttttgaagagctttaacatgagcatcaacc 915
Query: 619 agatctgtgacatcgatgtagtctctaacgcaagttccatc 659
| ||| |||||||| ||||| || | ||||||||||||||
Sbjct: 914 aaatcagtgacatcaatgtaatcccgtacgcaagttccatc 874
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 862 aaatctaagatgatgtcctccgccatcttctttgccttaccatatggattgat 914
||||| || ||||| || || ||||||||||| |||||||||||||| |||||
Sbjct: 680 aaatccaaaatgatatcttctgccatcttcttggccttaccatatgggttgat 628
>gb|BT002614.1| Arabidopsis thaliana At1g30620/T5I8_7 mRNA, complete cds
Length = 1260
Score = 105 bits (53), Expect = 2e-020
Identities = 110/129 (85%)
Strand = Plus / Minus
Query: 1077 tgtgctctcaccaacataagcaacagcagcaaagtgcataacagcgtcaaatgcattctc 1136
|||||| || |||||||| ||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 486 tgtgctttccccaacatatgcaacagcagcgaaatgcatcacagcgtcaaaggcattctc 427
Query: 1137 cgaaaatattttcttcacagctttggcatcgcctaagtcagcataaataaactgaagcct 1196
| ||||| || || |||||||||||||| || | |||||||||||||| ||||||||
Sbjct: 426 tgtgaatatcttgttgacagctttggcatctccaagatcagcataaataaattgaagcct 367
Query: 1197 tccgggttc 1205
||| |||||
Sbjct: 366 tccaggttc 358
Score = 77.8 bits (39), Expect = 4e-012
Identities = 105/127 (82%)
Strand = Plus / Minus
Query: 712 gctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagct 771
||||||||||| ||||||||||| || ||||||||||| || ||||| || ||||| |||
Sbjct: 842 gctgcatcaaaacaagcaccggagatgcgtccatgctctcgcagctcaggtcttggggct 783
Query: 772 tctcctagccgtccctctgggtctgatccaatcacgttgaagtatcttaagatcatgaca 831
|| || | | |||||||| || || |||||||| ||||| ||||||| |||||| ||
Sbjct: 782 tcacccaatctgccctctggatcggacccaatcacattgaaatatcttaggatcataact 723
Query: 832 gccatat 838
|||||||
Sbjct: 722 gccatat 716
Score = 65.9 bits (33), Expect = 2e-008
Identities = 129/161 (80%)
Strand = Plus / Minus
Query: 499 gttgccttcttgcaagcttctacaaactcagtcactgatctaccttggcctgttccgaca 558
||||| |||||||| || || |||||||| |||| || ||||||| || || || |||
Sbjct: 1055 gttgctttcttgcacgcctcaacaaactctttcaccgagctacctttcccggtgccaaca 996
Query: 559 ttgtagattccaactttgcctggctgagctttaccaagagcttttacgtgagcatctaca 618
||||||||||||||||||| ||| | || || ||||||||| || |||||||| ||
Sbjct: 995 ttgtagattccaactttgcgtggttttgccttttgaagagctttaacatgagcatcaacc 936
Query: 619 agatctgtgacatcgatgtagtctctaacgcaagttccatc 659
| ||| |||||||| ||||| || | ||||||||||||||
Sbjct: 935 aaatcagtgacatcaatgtaatcccgtacgcaagttccatc 895
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 862 aaatctaagatgatgtcctccgccatcttctttgccttaccatatggattgat 914
||||| || ||||| || || ||||||||||| |||||||||||||| |||||
Sbjct: 701 aaatccaaaatgatatcttctgccatcttcttggccttaccatatgggttgat 649
>gb|AY195742.1| Arabidopsis thaliana UDP-D-xylose 4-epimerase (MUR4) mRNA, complete
cds
Length = 1579
Score = 105 bits (53), Expect = 2e-020
Identities = 110/129 (85%)
Strand = Plus / Minus
Query: 1077 tgtgctctcaccaacataagcaacagcagcaaagtgcataacagcgtcaaatgcattctc 1136
|||||| || |||||||| ||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 524 tgtgctttccccaacatatgcaacagcagcgaaatgcatcacagcgtcaaaggcattctc 465
Query: 1137 cgaaaatattttcttcacagctttggcatcgcctaagtcagcataaataaactgaagcct 1196
| ||||| || || |||||||||||||| || | |||||||||||||| ||||||||
Sbjct: 464 tgtgaatatcttgttgacagctttggcatctccaagatcagcataaataaattgaagcct 405
Query: 1197 tccgggttc 1205
||| |||||
Sbjct: 404 tccaggttc 396
Score = 77.8 bits (39), Expect = 4e-012
Identities = 105/127 (82%)
Strand = Plus / Minus
Query: 712 gctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagct 771
||||||||||| ||||||||||| || ||||||||||| || ||||| || ||||| |||
Sbjct: 880 gctgcatcaaaacaagcaccggagatgcgtccatgctctcgcagctcaggtcttggggct 821
Query: 772 tctcctagccgtccctctgggtctgatccaatcacgttgaagtatcttaagatcatgaca 831
|| || | | |||||||| || || |||||||| ||||| ||||||| |||||| ||
Sbjct: 820 tcacccaatctgccctctggatcggacccaatcacattgaaatatcttaggatcataact 761
Query: 832 gccatat 838
|||||||
Sbjct: 760 gccatat 754
Score = 65.9 bits (33), Expect = 2e-008
Identities = 129/161 (80%)
Strand = Plus / Minus
Query: 499 gttgccttcttgcaagcttctacaaactcagtcactgatctaccttggcctgttccgaca 558
||||| |||||||| || || |||||||| |||| || ||||||| || || || |||
Sbjct: 1093 gttgctttcttgcacgcctcaacaaactctttcaccgagctacctttcccggtgccaaca 1034
Query: 559 ttgtagattccaactttgcctggctgagctttaccaagagcttttacgtgagcatctaca 618
||||||||||||||||||| ||| | || || ||||||||| || |||||||| ||
Sbjct: 1033 ttgtagattccaactttgcgtggttttgccttttgaagagctttaacatgagcatcaacc 974
Query: 619 agatctgtgacatcgatgtagtctctaacgcaagttccatc 659
| ||| |||||||| ||||| || | ||||||||||||||
Sbjct: 973 aaatcagtgacatcaatgtaatcccgtacgcaagttccatc 933
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 862 aaatctaagatgatgtcctccgccatcttctttgccttaccatatggattgat 914
||||| || ||||| || || ||||||||||| |||||||||||||| |||||
Sbjct: 739 aaatccaaaatgatatcttctgccatcttcttggccttaccatatgggttgat 687
>emb|AX651855.1| Sequence 721 from Patent WO03000898
Length = 1239
Score = 105 bits (53), Expect = 2e-020
Identities = 110/129 (85%)
Strand = Plus / Minus
Query: 1077 tgtgctctcaccaacataagcaacagcagcaaagtgcataacagcgtcaaatgcattctc 1136
|||||| || |||||||| ||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 465 tgtgctttccccaacatatgcaacagcagcgaaatgcatcacagcgtcaaaggcattctc 406
Query: 1137 cgaaaatattttcttcacagctttggcatcgcctaagtcagcataaataaactgaagcct 1196
| ||||| || || |||||||||||||| || | |||||||||||||| ||||||||
Sbjct: 405 tgtgaatatcttgttgacagctttggcatctccaagatcagcataaataaattgaagcct 346
Query: 1197 tccgggttc 1205
||| |||||
Sbjct: 345 tccaggttc 337
Score = 77.8 bits (39), Expect = 4e-012
Identities = 105/127 (82%)
Strand = Plus / Minus
Query: 712 gctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagct 771
||||||||||| ||||||||||| || ||||||||||| || ||||| || ||||| |||
Sbjct: 821 gctgcatcaaaacaagcaccggagatgcgtccatgctctcgcagctcaggtcttggggct 762
Query: 772 tctcctagccgtccctctgggtctgatccaatcacgttgaagtatcttaagatcatgaca 831
|| || | | |||||||| || || |||||||| ||||| ||||||| |||||| ||
Sbjct: 761 tcacccaatctgccctctggatcggacccaatcacattgaaatatcttaggatcataact 702
Query: 832 gccatat 838
|||||||
Sbjct: 701 gccatat 695
Score = 65.9 bits (33), Expect = 2e-008
Identities = 129/161 (80%)
Strand = Plus / Minus
Query: 499 gttgccttcttgcaagcttctacaaactcagtcactgatctaccttggcctgttccgaca 558
||||| |||||||| || || |||||||| |||| || ||||||| || || || |||
Sbjct: 1034 gttgctttcttgcacgcctcaacaaactctttcaccgagctacctttcccggtgccaaca 975
Query: 559 ttgtagattccaactttgcctggctgagctttaccaagagcttttacgtgagcatctaca 618
||||||||||||||||||| ||| | || || ||||||||| || |||||||| ||
Sbjct: 974 ttgtagattccaactttgcgtggttttgccttttgaagagctttaacatgagcatcaacc 915
Query: 619 agatctgtgacatcgatgtagtctctaacgcaagttccatc 659
| ||| |||||||| ||||| || | ||||||||||||||
Sbjct: 914 aaatcagtgacatcaatgtaatcccgtacgcaagttccatc 874
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 862 aaatctaagatgatgtcctccgccatcttctttgccttaccatatggattgat 914
||||| || ||||| || || ||||||||||| |||||||||||||| |||||
Sbjct: 680 aaatccaaaatgatatcttctgccatcttcttggccttaccatatgggttgat 628
>gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5I8 sequence, complete sequence
Length = 96183
Score = 105 bits (53), Expect = 2e-020
Identities = 110/129 (85%)
Strand = Plus / Minus
Query: 1077 tgtgctctcaccaacataagcaacagcagcaaagtgcataacagcgtcaaatgcattctc 1136
|||||| || |||||||| ||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 31683 tgtgctttccccaacatatgcaacagcagcgaaatgcatcacagcgtcaaaggcattctc 31624
Query: 1137 cgaaaatattttcttcacagctttggcatcgcctaagtcagcataaataaactgaagcct 1196
| ||||| || || |||||||||||||| || | |||||||||||||| ||||||||
Sbjct: 31623 tgtgaatatcttgttgacagctttggcatctccaagatcagcataaataaattgaagcct 31564
Query: 1197 tccgggttc 1205
||| |||||
Sbjct: 31563 tccaggttc 31555
Score = 61.9 bits (31), Expect = 2e-007
Identities = 88/107 (82%)
Strand = Plus / Minus
Query: 712 gctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagct 771
||||||||||| ||||||||||| || ||||||||||| || ||||| || ||||| |||
Sbjct: 32295 gctgcatcaaaacaagcaccggagatgcgtccatgctctcgcagctcaggtcttggggct 32236
Query: 772 tctcctagccgtccctctgggtctgatccaatcacgttgaagtatct 818
|| || | | |||||||| || || |||||||| ||||| |||||
Sbjct: 32235 tcacccaatctgccctctggatcggacccaatcacattgaaatatct 32189
Score = 56.0 bits (28), Expect = 1e-005
Identities = 85/104 (81%)
Strand = Plus / Minus
Query: 556 acattgtagattccaactttgcctggctgagctttaccaagagcttttacgtgagcatct 615
|||||||||||||||||||||| ||| | || || ||||||||| || ||||||||
Sbjct: 32855 acattgtagattccaactttgcgtggttttgccttttgaagagctttaacatgagcatca 32796
Query: 616 acaagatctgtgacatcgatgtagtctctaacgcaagttccatc 659
|| | ||| |||||||| ||||| || | ||||||||||||||
Sbjct: 32795 accaaatcagtgacatcaatgtaatcccgtacgcaagttccatc 32752
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 862 aaatctaagatgatgtcctccgccatcttctttgccttaccatatggattgat 914
||||| || ||||| || || ||||||||||| |||||||||||||| |||||
Sbjct: 32061 aaatccaaaatgatatcttctgccatcttcttggccttaccatatgggttgat 32009
>ref|NM_179907.1| Arabidopsis thaliana NAD binding / catalytic AT2G34850 mRNA, complete
cds
Length = 1106
Score = 105 bits (53), Expect = 2e-020
Identities = 110/129 (85%)
Strand = Plus / Minus
Query: 1077 tgtgctctcaccaacataagcaacagcagcaaagtgcataacagcgtcaaatgcattctc 1136
|||||| || ||||||||||||||||||||||| ||||| |||||||||||||| || ||
Sbjct: 176 tgtgctttctccaacataagcaacagcagcaaaatgcatcacagcgtcaaatgcgttttc 117
Query: 1137 cgaaaatattttcttcacagctttggcatcgcctaagtcagcataaataaactgaagcct 1196
||||||||||| || ||||| || ||||| || | ||||||||||| || |||||| |
Sbjct: 116 agaaaatattttgttaacagcatttgcatctccaagatcagcataaatgaattgaagctt 57
Query: 1197 tccgggttc 1205
||| |||||
Sbjct: 56 tccaggttc 48
Score = 77.8 bits (39), Expect = 4e-012
Identities = 102/123 (82%)
Strand = Plus / Minus
Query: 715 gcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagcttct 774
||||||||||||||||| || |||||||||||||| | || || || |||||||||||
Sbjct: 528 gcatcaaagcaagcaccagagatccgtccatgctcactgagttcaggtcttggagcttca 469
Query: 775 cctagccgtccctctgggtctgatccaatcacgttgaagtatcttaagatcatgacagcc 834
||||| | ||||| || || || |||||||| ||||| ||||||| |||||| || |||
Sbjct: 468 cctagtctaccctcaggatcagacccaatcacattgaaatatcttaggatcataactgcc 409
Query: 835 ata 837
|||
Sbjct: 408 ata 406
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 862 aaatctaagatgatgtcctccgccatcttctttgccttaccatatggattgat 914
||||| |||||||| || || |||||||| || ||||| ||||||||||||||
Sbjct: 390 aaatccaagatgatatcttctgccatctttttagcctttccatatggattgat 338
>ref|NM_102799.4| Arabidopsis thaliana MUR4 (MURUS 4); catalytic AT1G30620 (MUR4)
transcript variant AT1G30620.1 mRNA, complete cds
Length = 1884
Score = 105 bits (53), Expect = 2e-020
Identities = 110/129 (85%)
Strand = Plus / Minus
Query: 1077 tgtgctctcaccaacataagcaacagcagcaaagtgcataacagcgtcaaatgcattctc 1136
|||||| || |||||||| ||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 836 tgtgctttccccaacatatgcaacagcagcgaaatgcatcacagcgtcaaaggcattctc 777
Query: 1137 cgaaaatattttcttcacagctttggcatcgcctaagtcagcataaataaactgaagcct 1196
| ||||| || || |||||||||||||| || | |||||||||||||| ||||||||
Sbjct: 776 tgtgaatatcttgttgacagctttggcatctccaagatcagcataaataaattgaagcct 717
Query: 1197 tccgggttc 1205
||| |||||
Sbjct: 716 tccaggttc 708
Score = 77.8 bits (39), Expect = 4e-012
Identities = 105/127 (82%)
Strand = Plus / Minus
Query: 712 gctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagct 771
||||||||||| ||||||||||| || ||||||||||| || ||||| || ||||| |||
Sbjct: 1192 gctgcatcaaaacaagcaccggagatgcgtccatgctctcgcagctcaggtcttggggct 1133
Query: 772 tctcctagccgtccctctgggtctgatccaatcacgttgaagtatcttaagatcatgaca 831
|| || | | |||||||| || || |||||||| ||||| ||||||| |||||| ||
Sbjct: 1132 tcacccaatctgccctctggatcggacccaatcacattgaaatatcttaggatcataact 1073
Query: 832 gccatat 838
|||||||
Sbjct: 1072 gccatat 1066
Score = 65.9 bits (33), Expect = 2e-008
Identities = 129/161 (80%)
Strand = Plus / Minus
Query: 499 gttgccttcttgcaagcttctacaaactcagtcactgatctaccttggcctgttccgaca 558
||||| |||||||| || || |||||||| |||| || ||||||| || || || |||
Sbjct: 1405 gttgctttcttgcacgcctcaacaaactctttcaccgagctacctttcccggtgccaaca 1346
Query: 559 ttgtagattccaactttgcctggctgagctttaccaagagcttttacgtgagcatctaca 618
||||||||||||||||||| ||| | || || ||||||||| || |||||||| ||
Sbjct: 1345 ttgtagattccaactttgcgtggttttgccttttgaagagctttaacatgagcatcaacc 1286
Query: 619 agatctgtgacatcgatgtagtctctaacgcaagttccatc 659
| ||| |||||||| ||||| || | ||||||||||||||
Sbjct: 1285 aaatcagtgacatcaatgtaatcccgtacgcaagttccatc 1245
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 862 aaatctaagatgatgtcctccgccatcttctttgccttaccatatggattgat 914
||||| || ||||| || || ||||||||||| |||||||||||||| |||||
Sbjct: 1051 aaatccaaaatgatatcttctgccatcttcttggccttaccatatgggttgat 999
>ref|NM_001036041.1| Arabidopsis thaliana MUR4 (MURUS 4); catalytic AT1G30620 (MUR4)
transcript variant AT1G30620.2 mRNA, complete cds
Length = 1900
Score = 105 bits (53), Expect = 2e-020
Identities = 110/129 (85%)
Strand = Plus / Minus
Query: 1077 tgtgctctcaccaacataagcaacagcagcaaagtgcataacagcgtcaaatgcattctc 1136
|||||| || |||||||| ||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 882 tgtgctttccccaacatatgcaacagcagcgaaatgcatcacagcgtcaaaggcattctc 823
Query: 1137 cgaaaatattttcttcacagctttggcatcgcctaagtcagcataaataaactgaagcct 1196
| ||||| || || |||||||||||||| || | |||||||||||||| ||||||||
Sbjct: 822 tgtgaatatcttgttgacagctttggcatctccaagatcagcataaataaattgaagcct 763
Query: 1197 tccgggttc 1205
||| |||||
Sbjct: 762 tccaggttc 754
Score = 77.8 bits (39), Expect = 4e-012
Identities = 105/127 (82%)
Strand = Plus / Minus
Query: 712 gctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagct 771
||||||||||| ||||||||||| || ||||||||||| || ||||| || ||||| |||
Sbjct: 1238 gctgcatcaaaacaagcaccggagatgcgtccatgctctcgcagctcaggtcttggggct 1179
Query: 772 tctcctagccgtccctctgggtctgatccaatcacgttgaagtatcttaagatcatgaca 831
|| || | | |||||||| || || |||||||| ||||| ||||||| |||||| ||
Sbjct: 1178 tcacccaatctgccctctggatcggacccaatcacattgaaatatcttaggatcataact 1119
Query: 832 gccatat 838
|||||||
Sbjct: 1118 gccatat 1112
Score = 65.9 bits (33), Expect = 2e-008
Identities = 129/161 (80%)
Strand = Plus / Minus
Query: 499 gttgccttcttgcaagcttctacaaactcagtcactgatctaccttggcctgttccgaca 558
||||| |||||||| || || |||||||| |||| || ||||||| || || || |||
Sbjct: 1451 gttgctttcttgcacgcctcaacaaactctttcaccgagctacctttcccggtgccaaca 1392
Query: 559 ttgtagattccaactttgcctggctgagctttaccaagagcttttacgtgagcatctaca 618
||||||||||||||||||| ||| | || || ||||||||| || |||||||| ||
Sbjct: 1391 ttgtagattccaactttgcgtggttttgccttttgaagagctttaacatgagcatcaacc 1332
Query: 619 agatctgtgacatcgatgtagtctctaacgcaagttccatc 659
| ||| |||||||| ||||| || | ||||||||||||||
Sbjct: 1331 aaatcagtgacatcaatgtaatcccgtacgcaagttccatc 1291
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 862 aaatctaagatgatgtcctccgccatcttctttgccttaccatatggattgat 914
||||| || ||||| || || ||||||||||| |||||||||||||| |||||
Sbjct: 1097 aaatccaaaatgatatcttctgccatcttcttggccttaccatatgggttgat 1045
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 105 bits (53), Expect = 2e-020
Identities = 110/129 (85%)
Strand = Plus / Minus
Query: 1077 tgtgctctcaccaacataagcaacagcagcaaagtgcataacagcgtcaaatgcattctc 1136
|||||| || |||||||| ||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 10856414 tgtgctttccccaacatatgcaacagcagcgaaatgcatcacagcgtcaaaggcattctc 10856355
Query: 1137 cgaaaatattttcttcacagctttggcatcgcctaagtcagcataaataaactgaagcct 1196
| ||||| || || |||||||||||||| || | |||||||||||||| ||||||||
Sbjct: 10856354 tgtgaatatcttgttgacagctttggcatctccaagatcagcataaataaattgaagcct 10856295
Query: 1197 tccgggttc 1205
||| |||||
Sbjct: 10856294 tccaggttc 10856286
Score = 61.9 bits (31), Expect = 2e-007
Identities = 88/107 (82%)
Strand = Plus / Minus
Query: 712 gctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagct 771
||||||||||| ||||||||||| || ||||||||||| || ||||| || ||||| |||
Sbjct: 10857026 gctgcatcaaaacaagcaccggagatgcgtccatgctctcgcagctcaggtcttggggct 10856967
Query: 772 tctcctagccgtccctctgggtctgatccaatcacgttgaagtatct 818
|| || | | |||||||| || || |||||||| ||||| |||||
Sbjct: 10856966 tcacccaatctgccctctggatcggacccaatcacattgaaatatct 10856920
Score = 56.0 bits (28), Expect = 1e-005
Identities = 85/104 (81%)
Strand = Plus / Minus
Query: 556 acattgtagattccaactttgcctggctgagctttaccaagagcttttacgtgagcatct 615
|||||||||||||||||||||| ||| | || || ||||||||| || ||||||||
Sbjct: 10857586 acattgtagattccaactttgcgtggttttgccttttgaagagctttaacatgagcatca 10857527
Query: 616 acaagatctgtgacatcgatgtagtctctaacgcaagttccatc 659
|| | ||| |||||||| ||||| || | ||||||||||||||
Sbjct: 10857526 accaaatcagtgacatcaatgtaatcccgtacgcaagttccatc 10857483
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 862 aaatctaagatgatgtcctccgccatcttctttgccttaccatatggattgat 914
||||| || ||||| || || ||||||||||| |||||||||||||| |||||
Sbjct: 10856792 aaatccaaaatgatatcttctgccatcttcttggccttaccatatgggttgat 10856740
>gb|AF083751.1| Arabidopsis thaliana clone sps542 unknown mRNA
Length = 1924
Score = 97.6 bits (49), Expect = 4e-018
Identities = 109/129 (84%)
Strand = Plus / Minus
Query: 1077 tgtgctctcaccaacataagcaacagcagcaaagtgcataacagcgtcaaatgcattctc 1136
|||||| || |||||||| ||| ||||||| || ||||| ||||||||||| ||||||||
Sbjct: 836 tgtgctttccccaacatatgcaccagcagcgaaatgcatcacagcgtcaaaggcattctc 777
Query: 1137 cgaaaatattttcttcacagctttggcatcgcctaagtcagcataaataaactgaagcct 1196
| ||||| || || |||||||||||||| || | |||||||||||||| ||||||||
Sbjct: 776 tgtgaatatcttgttgacagctttggcatctccaagatcagcataaataaattgaagcct 717
Query: 1197 tccgggttc 1205
||| |||||
Sbjct: 716 tccaggttc 708
Score = 77.8 bits (39), Expect = 4e-012
Identities = 105/127 (82%)
Strand = Plus / Minus
Query: 712 gctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagct 771
||||||||||| ||||||||||| || ||||||||||| || ||||| || ||||| |||
Sbjct: 1192 gctgcatcaaaacaagcaccggagatgcgtccatgctctcgcagctcaggtcttggggct 1133
Query: 772 tctcctagccgtccctctgggtctgatccaatcacgttgaagtatcttaagatcatgaca 831
|| || | | |||||||| || || |||||||| ||||| ||||||| |||||| ||
Sbjct: 1132 tcacccaatctgccctctggatcggacccaatcacattgaaatatcttaggatcataact 1073
Query: 832 gccatat 838
|||||||
Sbjct: 1072 gccatat 1066
Score = 65.9 bits (33), Expect = 2e-008
Identities = 129/161 (80%)
Strand = Plus / Minus
Query: 499 gttgccttcttgcaagcttctacaaactcagtcactgatctaccttggcctgttccgaca 558
||||| |||||||| || || |||||||| |||| || ||||||| || || || |||
Sbjct: 1405 gttgctttcttgcacgcctcaacaaactctttcaccgagctacctttcccggtgccaaca 1346
Query: 559 ttgtagattccaactttgcctggctgagctttaccaagagcttttacgtgagcatctaca 618
||||||||||||||||||| ||| | || || ||||||||| || |||||||| ||
Sbjct: 1345 ttgtagattccaactttgcgtggttttgccttttgaagagctttaacatgagcatcaacc 1286
Query: 619 agatctgtgacatcgatgtagtctctaacgcaagttccatc 659
| ||| |||||||| ||||| || | ||||||||||||||
Sbjct: 1285 aaatcagtgacatcaatgtaatcccgtacgcaagttccatc 1245
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 862 aaatctaagatgatgtcctccgccatcttctttgccttaccatatggattgat 914
||||| || ||||| || || ||||||||||| |||||||||||||| |||||
Sbjct: 1051 aaatccaaaatgatatcttctgccatcttcttggccttaccatatgggttgat 999
>ref|NM_123815.1| Arabidopsis thaliana DUR (DEFECTIVE UGE IN ROOT); NAD binding /
UDP-glucose 4-epimerase/ catalytic AT5G44480 (DUR) mRNA,
complete cds
Length = 1311
Score = 91.7 bits (46), Expect = 3e-016
Identities = 94/110 (85%)
Strand = Plus / Minus
Query: 1090 acataagcaacagcagcaaagtgcataacagcgtcaaatgcattctccgaaaatattttc 1149
|||||||| || |||||||| ||||| ||||||||||| ||||||||||| || ||||||
Sbjct: 545 acataagctaccgcagcaaaatgcattacagcgtcaaaagcattctccgagaagattttc 486
Query: 1150 ttcacagctttggcatcgcctaagtcagcataaataaactgaagccttcc 1199
| || ||| || ||| ||||||||||||||||| |||||||| |||||
Sbjct: 485 tcgaccgctaagggatctcctaagtcagcataaatgaactgaagtcttcc 436
Score = 67.9 bits (34), Expect = 4e-009
Identities = 103/126 (81%)
Strand = Plus / Minus
Query: 711 agctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagc 770
||||||||| || |||||||| || |||| ||| ||||| || || || || ||||| ||
Sbjct: 915 agctgcatcgaaacaagcaccagaaatccttccttgctcacgaagttcgggtcttggcgc 856
Query: 771 ttctcctagccgtccctctgggtctgatccaatcacgttgaagtatcttaagatcatgac 830
|||||||| | || |||| ||||| |||||||| |||||||||||||||||||| ||
Sbjct: 855 ttctcctaatctacctcctggatctgaaccaatcacattgaagtatcttaagatcataac 796
Query: 831 agccat 836
|||||
Sbjct: 795 cgccat 790
Score = 56.0 bits (28), Expect = 1e-005
Identities = 85/104 (81%)
Strand = Plus / Minus
Query: 550 gttccgacattgtagattccaactttgcctggctgagctttaccaagagcttttacgtga 609
||||| ||||||||||| || ||||| | ||||||||||| | ||||| || ||||||
Sbjct: 1076 gttccaacattgtagataccgacttttcgaggctgagctttctcgagagccttcacgtga 1017
Query: 610 gcatctacaagatctgtgacatcgatgtagtctctaacgcaagt 653
||||| || || || || ||||| || |||||||||| ||||||
Sbjct: 1016 gcatccacgaggtcagtaacatctatatagtctctaatgcaagt 973
>gb|AC004238.3| Arabidopsis thaliana chromosome 2 clone F19I3 map ve016, complete
sequence
Length = 108484
Score = 87.7 bits (44), Expect = 4e-015
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 1077 tgtgctctcaccaacataagcaacagcagcaaagtgcataacagcgtcaaatgcattctc 1136
|||||| || ||||||||||||||||||||||| ||||| |||||||||||||| || ||
Sbjct: 34591 tgtgctttctccaacataagcaacagcagcaaaatgcatcacagcgtcaaatgcgttttc 34650
Query: 1137 cgaaaatatttt 1148
|||||||||||
Sbjct: 34651 agaaaatatttt 34662
Score = 65.9 bits (33), Expect = 2e-008
Identities = 90/109 (82%)
Strand = Plus / Plus
Query: 715 gcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagcttct 774
||||||||||||||||| || |||||||||||||| | || || || |||||||||||
Sbjct: 34050 gcatcaaagcaagcaccagagatccgtccatgctcactgagttcaggtcttggagcttca 34109
Query: 775 cctagccgtccctctgggtctgatccaatcacgttgaagtatcttaaga 823
||||| | ||||| || || || |||||||| ||||| ||||| ||||
Sbjct: 34110 cctagtctaccctcaggatcagacccaatcacattgaaatatctgaaga 34158
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 862 aaatctaagatgatgtcctccgccatcttctttgccttaccatatggattgat 914
||||| |||||||| || || |||||||| || ||||| ||||||||||||||
Sbjct: 34291 aaatccaagatgatatcttctgccatctttttagcctttccatatggattgat 34343
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 87.7 bits (44), Expect = 4e-015
Identities = 128/156 (82%)
Strand = Plus / Plus
Query: 505 ttcttgcaagcttctacaaactcagtcactgatctaccttggcctgttccgacattgtag 564
||||| || ||||| |||||||| |||| ||||| |||| ||||| || ||||||||
Sbjct: 6942717 ttcttacatgcttccacaaactctttcaccgatcttccttttcctgtacctacattgtat 6942776
Query: 565 attccaactttgcctggctgagctttaccaagagcttttacgtgagcatctacaagatct 624
||||| || || | |||| |||||| | |||||||||||||||||||||||||| ||
Sbjct: 6942777 attcccacatttctaggcttagctttctcgagagcttttacgtgagcatctacaaggtca 6942836
Query: 625 gtgacatcgatgtagtctctaacgcaagttccatct 660
|| ||||| |||||||| | ||| ||||||||||||
Sbjct: 6942837 gtaacatctatgtagtcacgaacacaagttccatct 6942872
Score = 83.8 bits (42), Expect = 7e-014
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 1153 acagctttggcatcgcctaagtcagcataaataaactgaagccttccgggttct 1206
|||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 6943791 acagctttggcatctcctaagtcagcataaataaattgaagcctcccgggttct 6943844
Score = 71.9 bits (36), Expect = 2e-010
Identities = 90/108 (83%)
Strand = Plus / Plus
Query: 711 agctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagc 770
||||||||| || || ||||| || |||||||| || || |||||||| ||| |||||||
Sbjct: 6943009 agctgcatcgaaacaggcacccgaaatccgtccgtgttcacgtagctcgggctttggagc 6943068
Query: 771 ttctcctagccgtccctctgggtctgatccaatcacgttgaagtatct 818
||||||||| | || ||||| ||||| || |||||||| ||||||||
Sbjct: 6943069 ttctcctagtctaccttctggatctgaacctatcacgttaaagtatct 6943116
Score = 54.0 bits (27), Expect = 6e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 1078 gtgctctcaccaacataagcaacagcagcaaagtgcataacagcgtcaaatgcattctc 1136
|||||||| |||||||| || || |||||||| ||||||||||| ||||| || |||||
Sbjct: 6943634 gtgctctctccaacatatgctactgcagcaaaatgcataacagcatcaaacgcgttctc 6943692
>emb|AL080253.2|ATF9F13 Arabidopsis thaliana DNA chromosome 4, BAC clone F9F13 (ESSA project)
Length = 109936
Score = 87.7 bits (44), Expect = 4e-015
Identities = 128/156 (82%)
Strand = Plus / Plus
Query: 505 ttcttgcaagcttctacaaactcagtcactgatctaccttggcctgttccgacattgtag 564
||||| || ||||| |||||||| |||| ||||| |||| ||||| || ||||||||
Sbjct: 48555 ttcttacatgcttccacaaactctttcaccgatcttccttttcctgtacctacattgtat 48614
Query: 565 attccaactttgcctggctgagctttaccaagagcttttacgtgagcatctacaagatct 624
||||| || || | |||| |||||| | |||||||||||||||||||||||||| ||
Sbjct: 48615 attcccacatttctaggcttagctttctcgagagcttttacgtgagcatctacaaggtca 48674
Query: 625 gtgacatcgatgtagtctctaacgcaagttccatct 660
|| ||||| |||||||| | ||| ||||||||||||
Sbjct: 48675 gtaacatctatgtagtcacgaacacaagttccatct 48710
Score = 83.8 bits (42), Expect = 7e-014
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 1153 acagctttggcatcgcctaagtcagcataaataaactgaagccttccgggttct 1206
|||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 49629 acagctttggcatctcctaagtcagcataaataaattgaagcctcccgggttct 49682
Score = 71.9 bits (36), Expect = 2e-010
Identities = 90/108 (83%)
Strand = Plus / Plus
Query: 711 agctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagc 770
||||||||| || || ||||| || |||||||| || || |||||||| ||| |||||||
Sbjct: 48847 agctgcatcgaaacaggcacccgaaatccgtccgtgttcacgtagctcgggctttggagc 48906
Query: 771 ttctcctagccgtccctctgggtctgatccaatcacgttgaagtatct 818
||||||||| | || ||||| ||||| || |||||||| ||||||||
Sbjct: 48907 ttctcctagtctaccttctggatctgaacctatcacgttaaagtatct 48954
Score = 54.0 bits (27), Expect = 6e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 1078 gtgctctcaccaacataagcaacagcagcaaagtgcataacagcgtcaaatgcattctc 1136
|||||||| |||||||| || || |||||||| ||||||||||| ||||| || |||||
Sbjct: 49472 gtgctctctccaacatatgctactgcagcaaaatgcataacagcatcaaacgcgttctc 49530
>emb|AL161553.2|ATCHRIV53 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 53
Length = 197568
Score = 87.7 bits (44), Expect = 4e-015
Identities = 128/156 (82%)
Strand = Plus / Plus
Query: 505 ttcttgcaagcttctacaaactcagtcactgatctaccttggcctgttccgacattgtag 564
||||| || ||||| |||||||| |||| ||||| |||| ||||| || ||||||||
Sbjct: 34102 ttcttacatgcttccacaaactctttcaccgatcttccttttcctgtacctacattgtat 34161
Query: 565 attccaactttgcctggctgagctttaccaagagcttttacgtgagcatctacaagatct 624
||||| || || | |||| |||||| | |||||||||||||||||||||||||| ||
Sbjct: 34162 attcccacatttctaggcttagctttctcgagagcttttacgtgagcatctacaaggtca 34221
Query: 625 gtgacatcgatgtagtctctaacgcaagttccatct 660
|| ||||| |||||||| | ||| ||||||||||||
Sbjct: 34222 gtaacatctatgtagtcacgaacacaagttccatct 34257
Score = 83.8 bits (42), Expect = 7e-014
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 1153 acagctttggcatcgcctaagtcagcataaataaactgaagccttccgggttct 1206
|||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 35176 acagctttggcatctcctaagtcagcataaataaattgaagcctcccgggttct 35229
Score = 71.9 bits (36), Expect = 2e-010
Identities = 90/108 (83%)
Strand = Plus / Plus
Query: 711 agctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagc 770
||||||||| || || ||||| || |||||||| || || |||||||| ||| |||||||
Sbjct: 34394 agctgcatcgaaacaggcacccgaaatccgtccgtgttcacgtagctcgggctttggagc 34453
Query: 771 ttctcctagccgtccctctgggtctgatccaatcacgttgaagtatct 818
||||||||| | || ||||| ||||| || |||||||| ||||||||
Sbjct: 34454 ttctcctagtctaccttctggatctgaacctatcacgttaaagtatct 34501
Score = 54.0 bits (27), Expect = 6e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 1078 gtgctctcaccaacataagcaacagcagcaaagtgcataacagcgtcaaatgcattctc 1136
|||||||| |||||||| || || |||||||| ||||||||||| ||||| || |||||
Sbjct: 35019 gtgctctctccaacatatgctactgcagcaaaatgcataacagcatcaaacgcgttctc 35077
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 87.7 bits (44), Expect = 4e-015
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 1077 tgtgctctcaccaacataagcaacagcagcaaagtgcataacagcgtcaaatgcattctc 1136
|||||| || ||||||||||||||||||||||| ||||| |||||||||||||| || ||
Sbjct: 14712993 tgtgctttctccaacataagcaacagcagcaaaatgcatcacagcgtcaaatgcgttttc 14713052
Query: 1137 cgaaaatatttt 1148
|||||||||||
Sbjct: 14713053 agaaaatatttt 14713064
Score = 65.9 bits (33), Expect = 2e-008
Identities = 90/109 (82%)
Strand = Plus / Plus
Query: 715 gcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagcttct 774
||||||||||||||||| || |||||||||||||| | || || || |||||||||||
Sbjct: 14712452 gcatcaaagcaagcaccagagatccgtccatgctcactgagttcaggtcttggagcttca 14712511
Query: 775 cctagccgtccctctgggtctgatccaatcacgttgaagtatcttaaga 823
||||| | ||||| || || || |||||||| ||||| ||||| ||||
Sbjct: 14712512 cctagtctaccctcaggatcagacccaatcacattgaaatatctgaaga 14712560
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 862 aaatctaagatgatgtcctccgccatcttctttgccttaccatatggattgat 914
||||| |||||||| || || |||||||| || ||||| ||||||||||||||
Sbjct: 14712693 aaatccaagatgatatcttctgccatctttttagcctttccatatggattgat 14712745
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 87.7 bits (44), Expect = 4e-015
Identities = 128/156 (82%)
Strand = Plus / Plus
Query: 505 ttcttgcaagcttctacaaactcagtcactgatctaccttggcctgttccgacattgtag 564
||||| || ||||| |||||||| |||| ||||| |||| ||||| || ||||||||
Sbjct: 11029968 ttcttacatgcttccacaaactctttcaccgatcttccttttcctgtacctacattgtat 11030027
Query: 565 attccaactttgcctggctgagctttaccaagagcttttacgtgagcatctacaagatct 624
||||| || || | |||| |||||| | |||||||||||||||||||||||||| ||
Sbjct: 11030028 attcccacatttctaggcttagctttctcgagagcttttacgtgagcatctacaaggtca 11030087
Query: 625 gtgacatcgatgtagtctctaacgcaagttccatct 660
|| ||||| |||||||| | ||| ||||||||||||
Sbjct: 11030088 gtaacatctatgtagtcacgaacacaagttccatct 11030123
Score = 83.8 bits (42), Expect = 7e-014
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 1153 acagctttggcatcgcctaagtcagcataaataaactgaagccttccgggttct 1206
|||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 11031042 acagctttggcatctcctaagtcagcataaataaattgaagcctcccgggttct 11031095
Score = 71.9 bits (36), Expect = 2e-010
Identities = 90/108 (83%)
Strand = Plus / Plus
Query: 711 agctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagc 770
||||||||| || || ||||| || |||||||| || || |||||||| ||| |||||||
Sbjct: 11030260 agctgcatcgaaacaggcacccgaaatccgtccgtgttcacgtagctcgggctttggagc 11030319
Query: 771 ttctcctagccgtccctctgggtctgatccaatcacgttgaagtatct 818
||||||||| | || ||||| ||||| || |||||||| ||||||||
Sbjct: 11030320 ttctcctagtctaccttctggatctgaacctatcacgttaaagtatct 11030367
Score = 54.0 bits (27), Expect = 6e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 1078 gtgctctcaccaacataagcaacagcagcaaagtgcataacagcgtcaaatgcattctc 1136
|||||||| |||||||| || || |||||||| ||||||||||| ||||| || |||||
Sbjct: 11030885 gtgctctctccaacatatgctactgcagcaaaatgcataacagcatcaaacgcgttctc 11030943
>emb|BX815256.1|CNS0AAN9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS47ZB07 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1831
Score = 85.7 bits (43), Expect = 2e-014
Identities = 100/119 (84%)
Strand = Plus / Minus
Query: 1087 ccaacataagcaacagcagcaaagtgcataacagcgtcaaatgcattctccgaaaatatt 1146
|||||||| |||||||||| || ||||| ||||| ||||| |||||||| | |||||
Sbjct: 770 ccaacatattcaacagcagcgaaatgcatcacagcttcaaaggcattctctgtgaatatc 711
Query: 1147 ttcttcacagctttggcatcgcctaagtcagcataaataaactgaagccttccgggttc 1205
|| || |||||||||||||| || | |||||||||||||| ||||||||||| |||||
Sbjct: 710 ttgttgacagctttggcatctccaagatcagcataaataaattgaagccttccaggttc 652
Score = 77.8 bits (39), Expect = 4e-012
Identities = 105/127 (82%)
Strand = Plus / Minus
Query: 712 gctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagct 771
||||||||||| ||||||||||| || ||||||||||| || ||||| || ||||| |||
Sbjct: 1139 gctgcatcaaaacaagcaccggagatgcgtccatgctctcgcagctcaggtcttggggct 1080
Query: 772 tctcctagccgtccctctgggtctgatccaatcacgttgaagtatcttaagatcatgaca 831
|| || | | |||||||| || || |||||||| ||||| ||||||| |||||| ||
Sbjct: 1079 tcacccaatctgccctctggatcggacccaatcacattgaaatatcttaggatcataact 1020
Query: 832 gccatat 838
|||||||
Sbjct: 1019 gccatat 1013
Score = 65.9 bits (33), Expect = 2e-008
Identities = 129/161 (80%)
Strand = Plus / Minus
Query: 499 gttgccttcttgcaagcttctacaaactcagtcactgatctaccttggcctgttccgaca 558
||||| |||||||| || || |||||||| |||| || ||||||| || || || |||
Sbjct: 1352 gttgctttcttgcacgcctcaacaaactctttcaccgagctacctttcccggtgccaaca 1293
Query: 559 ttgtagattccaactttgcctggctgagctttaccaagagcttttacgtgagcatctaca 618
||||||||||||||||||| ||| | || || ||||||||| || |||||||| ||
Sbjct: 1292 ttgtagattccaactttgcgtggttttgccttttgaagagctttaacatgagcatcaacc 1233
Query: 619 agatctgtgacatcgatgtagtctctaacgcaagttccatc 659
| ||| |||||||| ||||| || | ||||||||||||||
Sbjct: 1232 aaatcagtgacatcaatgtaatcccgtacgcaagttccatc 1192
Score = 42.1 bits (21), Expect = 0.22
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 862 aaatctaagatgatgtcctccgccatcttctttgccttaccatatggattgat 914
||||| || ||||| || || ||||||||||| | |||||||||||| |||||
Sbjct: 998 aaatccaaaatgatatcttctgccatcttcttgggcttaccatatgggttgat 946
>gb|AY091699.1| Arabidopsis thaliana At2g34850/F19I3.8 mRNA, complete cds
Length = 711
Score = 77.8 bits (39), Expect = 4e-012
Identities = 102/123 (82%)
Strand = Plus / Minus
Query: 715 gcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagcttct 774
||||||||||||||||| || |||||||||||||| | || || || |||||||||||
Sbjct: 293 gcatcaaagcaagcaccagagatccgtccatgctcactgagttcaggtcttggagcttca 234
Query: 775 cctagccgtccctctgggtctgatccaatcacgttgaagtatcttaagatcatgacagcc 834
||||| | ||||| || || || |||||||| ||||| ||||||| |||||| || |||
Sbjct: 233 cctagtctaccctcaggatcagacccaatcacattgaaatatcttaggatcataactgcc 174
Query: 835 ata 837
|||
Sbjct: 173 ata 171
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 862 aaatctaagatgatgtcctccgccatcttctttgccttaccatatggattgat 914
||||| |||||||| || || |||||||| || ||||| ||||||||||||||
Sbjct: 155 aaatccaagatgatatcttctgccatctttttagcctttccatatggattgat 103
>dbj|AK220800.1| Arabidopsis thaliana mRNA for UDP-galactose 4-epimerase-like
protein, complete cds, clone: RAFL22-29-J05
Length = 1015
Score = 77.8 bits (39), Expect = 4e-012
Identities = 105/127 (82%)
Strand = Plus / Minus
Query: 712 gctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagct 771
||||||||||| ||||||||||| || ||||||||||| || ||||| || ||||| |||
Sbjct: 320 gctgcatcaaaacaagcaccggagatgcgtccatgctctcgcagctcaggtcttggggct 261
Query: 772 tctcctagccgtccctctgggtctgatccaatcacgttgaagtatcttaagatcatgaca 831
|| || | | |||||||| || || |||||||| ||||| ||||||| |||||| ||
Sbjct: 260 tcacccaatctgccctctggatcggacccaatcacattgaaatatcttaggatcataact 201
Query: 832 gccatat 838
|||||||
Sbjct: 200 gccatat 194
Score = 65.9 bits (33), Expect = 2e-008
Identities = 129/161 (80%)
Strand = Plus / Minus
Query: 499 gttgccttcttgcaagcttctacaaactcagtcactgatctaccttggcctgttccgaca 558
||||| |||||||| || || |||||||| |||| || ||||||| || || || |||
Sbjct: 533 gttgctttcttgcacgcctcaacaaactctttcaccgagctacctttcccggtgccaaca 474
Query: 559 ttgtagattccaactttgcctggctgagctttaccaagagcttttacgtgagcatctaca 618
||||||||||||||||||| ||| | || || ||||||||| || |||||||| ||
Sbjct: 473 ttgtagattccaactttgcgtggttttgccttttgaagagctttaacatgagcatcaacc 414
Query: 619 agatctgtgacatcgatgtagtctctaacgcaagttccatc 659
| ||| |||||||| ||||| || | ||||||||||||||
Sbjct: 413 aaatcagtgacatcaatgtaatcccgtacgcaagttccatc 373
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 862 aaatctaagatgatgtcctccgccatcttctttgccttaccatatggattgat 914
||||| || ||||| || || ||||||||||| |||||||||||||| |||||
Sbjct: 179 aaatccaaaatgatatcttctgccatcttcttggccttaccatatgggttgat 127
>dbj|AB017065.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFC16
Length = 61290
Score = 65.9 bits (33), Expect = 2e-008
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 1090 acataagcaacagcagcaaagtgcataacagcgtcaaatgcattctccgaaaatattttc 1149
|||||||| || |||||||| ||||| ||||||||||| ||||||||||| || ||||||
Sbjct: 35769 acataagctaccgcagcaaaatgcattacagcgtcaaaagcattctccgagaagattttc 35710
Query: 1150 t 1150
|
Sbjct: 35709 t 35709
Score = 56.0 bits (28), Expect = 1e-005
Identities = 85/104 (81%)
Strand = Plus / Minus
Query: 550 gttccgacattgtagattccaactttgcctggctgagctttaccaagagcttttacgtga 609
||||| ||||||||||| || ||||| | ||||||||||| | ||||| || ||||||
Sbjct: 36645 gttccaacattgtagataccgacttttcgaggctgagctttctcgagagccttcacgtga 36586
Query: 610 gcatctacaagatctgtgacatcgatgtagtctctaacgcaagt 653
||||| || || || || ||||| || |||||||||| ||||||
Sbjct: 36585 gcatccacgaggtcagtaacatctatatagtctctaatgcaagt 36542
Score = 48.1 bits (24), Expect = 0.004
Identities = 87/108 (80%)
Strand = Plus / Minus
Query: 711 agctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagc 770
||||||||| || |||||||| || |||| ||| ||||| || || || || ||||| ||
Sbjct: 36406 agctgcatcgaaacaagcaccagaaatccttccttgctcacgaagttcgggtcttggcgc 36347
Query: 771 ttctcctagccgtccctctgggtctgatccaatcacgttgaagtatct 818
|||||||| | || |||| ||||| |||||||| |||||||||||
Sbjct: 36346 ttctcctaatctacctcctggatctgaaccaatcacattgaagtatct 36299
Score = 48.1 bits (24), Expect = 0.004
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1168 cctaagtcagcataaataaactgaagccttcc 1199
||||||||||||||||| |||||||| |||||
Sbjct: 35598 cctaagtcagcataaatgaactgaagtcttcc 35567
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 65.9 bits (33), Expect = 2e-008
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 1090 acataagcaacagcagcaaagtgcataacagcgtcaaatgcattctccgaaaatattttc 1149
|||||||| || |||||||| ||||| ||||||||||| ||||||||||| || ||||||
Sbjct: 16285045 acataagctaccgcagcaaaatgcattacagcgtcaaaagcattctccgagaagattttc 16284986
Query: 1150 t 1150
|
Sbjct: 16284985 t 16284985
Score = 56.0 bits (28), Expect = 1e-005
Identities = 85/104 (81%)
Strand = Plus / Minus
Query: 550 gttccgacattgtagattccaactttgcctggctgagctttaccaagagcttttacgtga 609
||||| ||||||||||| || ||||| | ||||||||||| | ||||| || ||||||
Sbjct: 16285921 gttccaacattgtagataccgacttttcgaggctgagctttctcgagagccttcacgtga 16285862
Query: 610 gcatctacaagatctgtgacatcgatgtagtctctaacgcaagt 653
||||| || || || || ||||| || |||||||||| ||||||
Sbjct: 16285861 gcatccacgaggtcagtaacatctatatagtctctaatgcaagt 16285818
Score = 48.1 bits (24), Expect = 0.004
Identities = 87/108 (80%)
Strand = Plus / Minus
Query: 711 agctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagc 770
||||||||| || |||||||| || |||| ||| ||||| || || || || ||||| ||
Sbjct: 16285682 agctgcatcgaaacaagcaccagaaatccttccttgctcacgaagttcgggtcttggcgc 16285623
Query: 771 ttctcctagccgtccctctgggtctgatccaatcacgttgaagtatct 818
|||||||| | || |||| ||||| |||||||| |||||||||||
Sbjct: 16285622 ttctcctaatctacctcctggatctgaaccaatcacattgaagtatct 16285575
Score = 48.1 bits (24), Expect = 0.004
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1168 cctaagtcagcataaataaactgaagccttcc 1199
||||||||||||||||| |||||||| |||||
Sbjct: 16284874 cctaagtcagcataaatgaactgaagtcttcc 16284843
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 65.9 bits (33), Expect = 2e-008
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 1090 acataagcaacagcagcaaagtgcataacagcgtcaaatgcattctccgaaaatattttc 1149
|||||||| || |||||||| ||||| ||||||||||| ||||||||||| || ||||||
Sbjct: 17939551 acataagctaccgcagcaaaatgcattacagcgtcaaaagcattctccgagaagattttc 17939492
Query: 1150 t 1150
|
Sbjct: 17939491 t 17939491
Score = 56.0 bits (28), Expect = 1e-005
Identities = 85/104 (81%)
Strand = Plus / Minus
Query: 550 gttccgacattgtagattccaactttgcctggctgagctttaccaagagcttttacgtga 609
||||| ||||||||||| || ||||| | ||||||||||| | ||||| || ||||||
Sbjct: 17940427 gttccaacattgtagataccgacttttcgaggctgagctttctcgagagccttcacgtga 17940368
Query: 610 gcatctacaagatctgtgacatcgatgtagtctctaacgcaagt 653
||||| || || || || ||||| || |||||||||| ||||||
Sbjct: 17940367 gcatccacgaggtcagtaacatctatatagtctctaatgcaagt 17940324
Score = 48.1 bits (24), Expect = 0.004
Identities = 87/108 (80%)
Strand = Plus / Minus
Query: 711 agctgcatcaaagcaagcaccggatatccgtccatgctcgcgtagctctggccttggagc 770
||||||||| || |||||||| || |||| ||| ||||| || || || || ||||| ||
Sbjct: 17940188 agctgcatcgaaacaagcaccagaaatccttccttgctcacgaagttcgggtcttggcgc 17940129
Query: 771 ttctcctagccgtccctctgggtctgatccaatcacgttgaagtatct 818
|||||||| | || |||| ||||| |||||||| |||||||||||
Sbjct: 17940128 ttctcctaatctacctcctggatctgaaccaatcacattgaagtatct 17940081
Score = 48.1 bits (24), Expect = 0.004
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1168 cctaagtcagcataaataaactgaagccttcc 1199
||||||||||||||||| |||||||| |||||
Sbjct: 17939380 cctaagtcagcataaatgaactgaagtcttcc 17939349
>gb|CL488579.1|CL488579 SAIL_511_B08.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_511_B08.v1, DNA sequence
Length = 930
Score = 63.9 bits (32), Expect = 6e-008
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 556 acattgtagattccaactttgcctggctgagctttaccaagagcttttacgtgagcatct 615
|||||||||||||||||||||| ||| | || || ||||||||| || ||||||||
Sbjct: 576 acattgtagattccaactttgcgtggttttgccttttgaagagctttaacatgagcatca 635
Query: 616 acaagatctgtgacatcgatgtagtctctaacgcaagttccatc 659
|| | ||| |||||||| ||||| || | |||||||||||||||
Sbjct: 636 accaaatcagtgacatcaatgtaatcccgaacgcaagttccatc 679
>gb|BP840233.1|BP840233 BP840233 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-29-J05 5',
mRNA sequence
Length = 389
Score = 63.9 bits (32), Expect = 6e-008
Identities = 105/128 (82%), Gaps = 1/128 (0%)
Strand = Plus / Minus
Query: 712 gctgcatcaaagcaag-caccggatatccgtccatgctcgcgtagctctggccttggagc 770
||||||||||| |||| ||||||| || ||||||||||| || ||||| || ||||| ||
Sbjct: 323 gctgcatcaaaacaaggcaccggagatgcgtccatgctctcgcagctcaggtcttggggc 264
Query: 771 ttctcctagccgtccctctgggtctgatccaatcacgttgaagtatcttaagatcatgac 830
||| || | | |||||||| || || |||||||| ||||| ||||||| |||||| ||
Sbjct: 263 ttcacccaatctgccctctggatcggacccaatcacattgaaatatcttaggatcataac 204
Query: 831 agccatat 838
|||||||
Sbjct: 203 tgccatat 196
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 862 aaatctaagatgatgtcctccgccatcttctttgccttaccatatggattgat 914
||||| || ||||| || || ||||||||||| |||||||||||||| |||||
Sbjct: 181 aaatccaaaatgatatcttctgccatcttcttggccttaccatatgggttgat 129
>gb|CC055840.1|CC055840 SALK_097720.30.80.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_097720.30.80.x,
DNA sequence
Length = 447
Score = 60.0 bits (30), Expect = 9e-007
Identities = 46/50 (92%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 1077 tgtgctctcaccaacataagcaacagcagcaa-agtgcataacagcgtca 1125
|||||| || |||||||||||||||||||||| ||||||| |||||||||
Sbjct: 289 tgtgctttctccaacataagcaacagcagcaacagtgcatcacagcgtca 240
>gb|B12819.1|B12819 T12E9-T7 TAMU Arabidopsis thaliana genomic clone T12E9, DNA
sequence
Length = 1153
Score = 56.0 bits (28), Expect = 1e-005
Identities = 85/104 (81%)
Strand = Plus / Minus
Query: 556 acattgtagattccaactttgcctggctgagctttaccaagagcttttacgtgagcatct 615
|||||||||||||||||||||| ||| | || || ||||||||| || ||||||||
Sbjct: 247 acattgtagattccaactttgcgtggttttgccttttgaagagctttaacatgagcatca 188
Query: 616 acaagatctgtgacatcgatgtagtctctaacgcaagttccatc 659
|| | ||| |||||||| ||||| || | ||||||||||||||
Sbjct: 187 accaaatcagtgacatcaatgtaatcccgtacgcaagttccatc 144
>gb|B28207.1|B28207 T5A21TRB TAMU Arabidopsis thaliana genomic clone T5A21, DNA
sequence
Length = 604
Score = 56.0 bits (28), Expect = 1e-005
Identities = 85/104 (81%)
Strand = Plus / Minus
Query: 556 acattgtagattccaactttgcctggctgagctttaccaagagcttttacgtgagcatct 615
|||||||||||||||||||||| ||| | || || ||||||||| || ||||||||
Sbjct: 469 acattgtagattccaactttgcgtggttttgccttttgaagagctttaacatgagcatca 410
Query: 616 acaagatctgtgacatcgatgtagtctctaacgcaagttccatc 659
|| | ||| |||||||| ||||| || | ||||||||||||||
Sbjct: 409 accaaatcagtgacatcaatgtaatcccgtacgcaagttccatc 366
>gb|AA597338.1|AA597338 29609 Lambda-PRL2 Arabidopsis thaliana cDNA clone 195M20T7, mRNA
sequence
Length = 270
Score = 56.0 bits (28), Expect = 1e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 556 acattgtagattccaactttgcctggctgagctttaccaagagcttttacgtgagcatct 615
|||||||||||||||||||||| ||| | || || ||||||||| || ||||||||
Sbjct: 102 acattgtagattccaactttgcgtggttttgccttttgaagagctttaacatgagcatca 161
Query: 616 acaagatctgtgacatcgatgtagtctctaacgcaagttccatc 659
|| | ||| |||||||| ||||| || | ||||||||||||||
Sbjct: 162 accaaatcagtgacatcaatgtaatcccgtacgcaagttccatc 205
>gb|BH758606.1|BH758606 SALK_028357.56.00.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_028357.56.00.x,
DNA sequence
Length = 334
Score = 54.0 bits (27), Expect = 6e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 715 gcatcaaagcaagcaccggatatccgtccatgctc 749
||||||||||||||||| || ||||||||||||||
Sbjct: 278 gcatcaaagcaagcaccagagatccgtccatgctc 312
>gb|BZ662340.1|BZ662340 SALK_025826.50.25.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_025826.50.25.x,
DNA sequence
Length = 189
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 862 aaatctaagatgatgtcctccgccatcttctttgccttaccatatggattgat 914
||||| |||||||| || || |||||||| || ||||| ||||||||||||||
Sbjct: 178 aaatccaagatgatatcttctgccatctttttagcctttccatatggattgat 126
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 669,907
Number of Sequences: 1013581
Number of extensions: 669907
Number of successful extensions: 49351
Number of sequences better than 0.5: 39
Number of HSP's better than 0.5 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47099
Number of HSP's gapped (non-prelim): 2249
length of query: 1214
length of database: 908,940,872
effective HSP length: 20
effective length of query: 1194
effective length of database: 888,669,252
effective search space: 1061071086888
effective search space used: 1061071086888
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)