BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2950225.2.1
(3330 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AB049934.1| Arabidopsis thaliana mRNA for cytokinin rec... 101 8e-019
dbj|AB049935.1| Arabidopsis thaliana mRNA for cytokinin rec... 101 8e-019
dbj|AB046871.1| Arabidopsis thaliana AHK4 mRNA for histidin... 101 8e-019
emb|AX505345.1| Sequence 40 from Patent WO0216655 101 8e-019
emb|AX537479.1| Sequence 5 from Patent EP1241182 101 8e-019
emb|AJ278528.1|ATH278528 Arabidopsis thaliana mRNA for puta... 101 8e-019
emb|AJ278529.1|ATH278529 Arabidopsis thaliana mRNA for puta... 101 8e-019
emb|AJ278530.1|ATH278530 Arabidopsis thaliana mRNA for puta... 101 8e-019
emb|CS063639.1| Sequence 1 from Patent EP1522586 101 8e-019
ref|NM_126244.2| Arabidopsis thaliana WOL (CYTOKININ RESPON... 101 8e-019
ref|NM_179594.1| Arabidopsis thaliana WOL (CYTOKININ RESPON... 101 8e-019
ref|NM_201667.1| Arabidopsis thaliana WOL (CYTOKININ RESPON... 101 8e-019
dbj|DD159606.1| Transformed Cell co-expressing both of cyto... 101 8e-019
gb|AV553937.1|AV553937 AV553937 Arabidopsis thaliana roots ... 76 4e-011
gb|AC007069.6| Arabidopsis thaliana chromosome 2 clone T23K... 76 4e-011
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 76 4e-011
dbj|AB046870.1| Arabidopsis thaliana AHK3 mRNA for histidin... 66 4e-008
emb|AX507714.1| Sequence 2409 from Patent WO0216655 66 4e-008
emb|AX537477.1| Sequence 3 from Patent EP1241182 66 4e-008
emb|CS063643.1| Sequence 5 from Patent EP1522586 66 4e-008
ref|NM_102494.2| Arabidopsis thaliana AHK3 (ARABIDOPSIS HIS... 66 4e-008
dbj|DD159608.1| Transformed Cell co-expressing both of cyto... 66 4e-008
gb|BP839719.1|BP839719 BP839719 RAFL19 Arabidopsis thaliana... 58 1e-005
dbj|AB046869.1| Arabidopsis thaliana AHK2 mRNA for histidin... 58 1e-005
emb|AX537475.1| Sequence 1 from Patent EP1241182 58 1e-005
gb|BT002530.1| Arabidopsis thaliana histidine kinase-like p... 58 1e-005
gb|BT008407.1| Arabidopsis thaliana At5g35750 gene, complet... 58 1e-005
dbj|AB011485.1| Arabidopsis thaliana genomic DNA, chromosom... 58 1e-005
dbj|AK175733.1| Arabidopsis thaliana mRNA for histidine kin... 58 1e-005
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 58 1e-005
emb|CS063641.1| Sequence 3 from Patent EP1522586 58 1e-005
ref|NM_122966.2| Arabidopsis thaliana AHK2 (ARABIDOPSIS HIS... 58 1e-005
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 58 1e-005
dbj|DD159607.1| Transformed Cell co-expressing both of cyto... 58 1e-005
gb|CL507516.1|CL507516 SAIL_781_H04.v3 SAIL Collection Arab... 48 0.010
gb|BH848027.1|BH848027 SALK_067380.55.50.x Arabidopsis thal... 46 0.039
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 46 0.039
gb|AC004557.2|AC004557 Genomic sequence for Arabidopsis tha... 46 0.039
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 46 0.039
emb|AL085495.1|CNS00Q8P Arabidopsis thaliana genome survey ... 44 0.16
gb|AI992824.1|AI992824 701493722 A. thaliana, Ohio State cl... 44 0.16
gb|BP593781.1|BP593781 BP593781 RAFL15 Arabidopsis thaliana... 44 0.16
>dbj|AB049934.1| Arabidopsis thaliana mRNA for cytokinin receptor CRE1a, complete cds
Length = 3649
Score = 101 bits (51), Expect = 8e-019
Identities = 177/219 (80%)
Strand = Plus / Minus
Query: 1980 ctttccagcctcaatctttgctcgatcaaggacatcatttatcagtgtaatcaatgctct 2039
||||||||| |||||||| || |||||||| || |||||||||| || |||||| ||| |
Sbjct: 1645 ctttccagcttcaatcttggcgcgatcaagaacctcatttatcaatgcaatcaaagcttt 1586
Query: 2040 gccacacatttgagcagtttgagcataatccttctgtgtcatagttagatctgttcctaa 2099
||||| | |||||| |||||||| ||||| |||||||| |||| ||||| |||
Sbjct: 1585 accacatacttgagcggtttgagcgtaatctctctgtgtcgagcttagttctgtatctag 1526
Query: 2100 aagcatatccagcattccaaggacgccattcataggtgttctgatctcatgtgacgcagt 2159
|||||| | |||||||| || | ||||||||| ||||| |||||||| || ||| | ||
Sbjct: 1525 gagcatagcaagcattccgagaatgccattcattggtgtcctgatctcgtgagacacggt 1466
Query: 2160 tgccaggaactgagattttgcaacatcagcagcttctgc 2198
|| || ||||| ||||| || |||||||||||||||||
Sbjct: 1465 agcaagaaactgcgatttagcgacatcagcagcttctgc 1427
Score = 77.8 bits (39), Expect = 1e-011
Identities = 129/159 (81%)
Strand = Plus / Minus
Query: 1314 gaacgtgcttccaacagaaggatggctggtgaaacttatctgcccacccataagttcagc 1373
|||||||||||||| | ||| |||| ||||| ||||||| |||| |||||||||| |
Sbjct: 2287 gaacgtgcttccaatatgaggccggcttatgaaatttatctgaccacgcataagttcaac 2228
Query: 1374 tagacacttgctgatgcttaaaccgatgccagtaccaccataattccttgaagttgaact 1433
||||||||||| || || ||||| || |||||||| ||||| || |||||||| || ||
Sbjct: 2227 aagacacttgcttatactcaaaccaataccagtacctccatagtttcttgaagtcgagct 2168
Query: 1434 gtcagcctgcataaacggtgtaaaaacacgatcttgtgc 1472
|| || ||||||||||| |||| ||||| |||||||
Sbjct: 2167 atctgcttgcataaacggcataaacacacggccttgtgc 2129
>dbj|AB049935.1| Arabidopsis thaliana mRNA for cytokinin receptor CRE1b, complete cds
Length = 3694
Score = 101 bits (51), Expect = 8e-019
Identities = 177/219 (80%)
Strand = Plus / Minus
Query: 1980 ctttccagcctcaatctttgctcgatcaaggacatcatttatcagtgtaatcaatgctct 2039
||||||||| |||||||| || |||||||| || |||||||||| || |||||| ||| |
Sbjct: 1682 ctttccagcttcaatcttggcgcgatcaagaacctcatttatcaatgcaatcaaagcttt 1623
Query: 2040 gccacacatttgagcagtttgagcataatccttctgtgtcatagttagatctgttcctaa 2099
||||| | |||||| |||||||| ||||| |||||||| |||| ||||| |||
Sbjct: 1622 accacatacttgagcggtttgagcgtaatctctctgtgtcgagcttagttctgtatctag 1563
Query: 2100 aagcatatccagcattccaaggacgccattcataggtgttctgatctcatgtgacgcagt 2159
|||||| | |||||||| || | ||||||||| ||||| |||||||| || ||| | ||
Sbjct: 1562 gagcatagcaagcattccgagaatgccattcattggtgtcctgatctcgtgagacacggt 1503
Query: 2160 tgccaggaactgagattttgcaacatcagcagcttctgc 2198
|| || ||||| ||||| || |||||||||||||||||
Sbjct: 1502 agcaagaaactgcgatttagcgacatcagcagcttctgc 1464
Score = 77.8 bits (39), Expect = 1e-011
Identities = 129/159 (81%)
Strand = Plus / Minus
Query: 1314 gaacgtgcttccaacagaaggatggctggtgaaacttatctgcccacccataagttcagc 1373
|||||||||||||| | ||| |||| ||||| ||||||| |||| |||||||||| |
Sbjct: 2324 gaacgtgcttccaatatgaggccggcttatgaaatttatctgaccacgcataagttcaac 2265
Query: 1374 tagacacttgctgatgcttaaaccgatgccagtaccaccataattccttgaagttgaact 1433
||||||||||| || || ||||| || |||||||| ||||| || |||||||| || ||
Sbjct: 2264 aagacacttgcttatactcaaaccaataccagtacctccatagtttcttgaagtcgagct 2205
Query: 1434 gtcagcctgcataaacggtgtaaaaacacgatcttgtgc 1472
|| || ||||||||||| |||| ||||| |||||||
Sbjct: 2204 atctgcttgcataaacggcataaacacacggccttgtgc 2166
>dbj|AB046871.1| Arabidopsis thaliana AHK4 mRNA for histidine kinase, complete cds
Length = 3243
Score = 101 bits (51), Expect = 8e-019
Identities = 177/219 (80%)
Strand = Plus / Minus
Query: 1980 ctttccagcctcaatctttgctcgatcaaggacatcatttatcagtgtaatcaatgctct 2039
||||||||| |||||||| || |||||||| || |||||||||| || |||||| ||| |
Sbjct: 1614 ctttccagcttcaatcttggcgcgatcaagaacctcatttatcaatgcaatcaaagcttt 1555
Query: 2040 gccacacatttgagcagtttgagcataatccttctgtgtcatagttagatctgttcctaa 2099
||||| | |||||| |||||||| ||||| |||||||| |||| ||||| |||
Sbjct: 1554 accacatacttgagcggtttgagcgtaatctctctgtgtcgagcttagttctgtatctag 1495
Query: 2100 aagcatatccagcattccaaggacgccattcataggtgttctgatctcatgtgacgcagt 2159
|||||| | |||||||| || | ||||||||| ||||| |||||||| || ||| | ||
Sbjct: 1494 gagcatagcaagcattccgagaatgccattcattggtgtcctgatctcgtgagacacggt 1435
Query: 2160 tgccaggaactgagattttgcaacatcagcagcttctgc 2198
|| || ||||| ||||| || |||||||||||||||||
Sbjct: 1434 agcaagaaactgcgatttagcgacatcagcagcttctgc 1396
Score = 75.8 bits (38), Expect = 4e-011
Identities = 113/138 (81%)
Strand = Plus / Minus
Query: 1314 gaacgtgcttccaacagaaggatggctggtgaaacttatctgcccacccataagttcagc 1373
|||||||||||||| | ||| |||| ||||| ||||||| |||| |||||||||| |
Sbjct: 2256 gaacgtgcttccaatatgaggccggcttatgaaatttatctgaccacgcataagttcaac 2197
Query: 1374 tagacacttgctgatgcttaaaccgatgccagtaccaccataattccttgaagttgaact 1433
||||||||||| || || ||||| || |||||||| ||||| || |||||||| || ||
Sbjct: 2196 aagacacttgcttatactcaaaccaataccagtacctccatagtttcttgaagtcgagct 2137
Query: 1434 gtcagcctgcataaacgg 1451
|| || |||||||||||
Sbjct: 2136 atctgcttgcataaacgg 2119
>emb|AX505345.1| Sequence 40 from Patent WO0216655
Length = 1803
Score = 101 bits (51), Expect = 8e-019
Identities = 177/219 (80%)
Strand = Plus / Minus
Query: 1980 ctttccagcctcaatctttgctcgatcaaggacatcatttatcagtgtaatcaatgctct 2039
||||||||| |||||||| || |||||||| || |||||||||| || |||||| ||| |
Sbjct: 276 ctttccagcttcaatcttggcgcgatcaagaacctcatttatcaatgcaatcaaagcttt 217
Query: 2040 gccacacatttgagcagtttgagcataatccttctgtgtcatagttagatctgttcctaa 2099
||||| | |||||| |||||||| ||||| |||||||| |||| ||||| |||
Sbjct: 216 accacatacttgagcggtttgagcgtaatctctctgtgtcgagcttagttctgtatctag 157
Query: 2100 aagcatatccagcattccaaggacgccattcataggtgttctgatctcatgtgacgcagt 2159
|||||| | |||||||| || | ||||||||| ||||| |||||||| || ||| | ||
Sbjct: 156 gagcatagcaagcattccgagaatgccattcattggtgtcctgatctcgtgagacacggt 97
Query: 2160 tgccaggaactgagattttgcaacatcagcagcttctgc 2198
|| || ||||| ||||| || |||||||||||||||||
Sbjct: 96 agcaagaaactgcgatttagcgacatcagcagcttctgc 58
Score = 75.8 bits (38), Expect = 4e-011
Identities = 113/138 (81%)
Strand = Plus / Minus
Query: 1314 gaacgtgcttccaacagaaggatggctggtgaaacttatctgcccacccataagttcagc 1373
|||||||||||||| | ||| |||| ||||| ||||||| |||| |||||||||| |
Sbjct: 774 gaacgtgcttccaatatgaggccggcttatgaaatttatctgaccacgcataagttcaac 715
Query: 1374 tagacacttgctgatgcttaaaccgatgccagtaccaccataattccttgaagttgaact 1433
||||||||||| || || ||||| || |||||||| ||||| || |||||||| || ||
Sbjct: 714 aagacacttgcttatactcaaaccaataccagtacctccatagtttcttgaagtcgagct 655
Query: 1434 gtcagcctgcataaacgg 1451
|| || |||||||||||
Sbjct: 654 atctgcttgcataaacgg 637
>emb|AX537479.1| Sequence 5 from Patent EP1241182
Length = 3174
Score = 101 bits (51), Expect = 8e-019
Identities = 177/219 (80%)
Strand = Plus / Minus
Query: 1980 ctttccagcctcaatctttgctcgatcaaggacatcatttatcagtgtaatcaatgctct 2039
||||||||| |||||||| || |||||||| || |||||||||| || |||||| ||| |
Sbjct: 1545 ctttccagcttcaatcttggcgcgatcaagaacctcatttatcaatgcaatcaaagcttt 1486
Query: 2040 gccacacatttgagcagtttgagcataatccttctgtgtcatagttagatctgttcctaa 2099
||||| | |||||| |||||||| ||||| |||||||| |||| ||||| |||
Sbjct: 1485 accacatacttgagcggtttgagcgtaatctctctgtgtcgagcttagttctgtatctag 1426
Query: 2100 aagcatatccagcattccaaggacgccattcataggtgttctgatctcatgtgacgcagt 2159
|||||| | |||||||| || | ||||||||| ||||| |||||||| || ||| | ||
Sbjct: 1425 gagcatagcaagcattccgagaatgccattcattggtgtcctgatctcgtgagacacggt 1366
Query: 2160 tgccaggaactgagattttgcaacatcagcagcttctgc 2198
|| || ||||| ||||| || |||||||||||||||||
Sbjct: 1365 agcaagaaactgcgatttagcgacatcagcagcttctgc 1327
Score = 77.8 bits (39), Expect = 1e-011
Identities = 129/159 (81%)
Strand = Plus / Minus
Query: 1314 gaacgtgcttccaacagaaggatggctggtgaaacttatctgcccacccataagttcagc 1373
|||||||||||||| | ||| |||| ||||| ||||||| |||| |||||||||| |
Sbjct: 2187 gaacgtgcttccaatatgaggccggcttatgaaatttatctgaccacgcataagttcaac 2128
Query: 1374 tagacacttgctgatgcttaaaccgatgccagtaccaccataattccttgaagttgaact 1433
||||||||||| || || ||||| || |||||||| ||||| || |||||||| || ||
Sbjct: 2127 aagacacttgcttatactcaaaccaataccagtacctccatagtttcttgaagtcgagct 2068
Query: 1434 gtcagcctgcataaacggtgtaaaaacacgatcttgtgc 1472
|| || ||||||||||| |||| ||||| |||||||
Sbjct: 2067 atctgcttgcataaacggcataaacacacggccttgtgc 2029
>emb|AJ278528.1|ATH278528 Arabidopsis thaliana mRNA for putative histidine kinase receptor (wol
gene), splice variant 1
Length = 3620
Score = 101 bits (51), Expect = 8e-019
Identities = 177/219 (80%)
Strand = Plus / Minus
Query: 1980 ctttccagcctcaatctttgctcgatcaaggacatcatttatcagtgtaatcaatgctct 2039
||||||||| |||||||| || |||||||| || |||||||||| || |||||| ||| |
Sbjct: 1684 ctttccagcttcaatcttggcgcgatcaagaacctcatttatcaatgcaatcaaagcttt 1625
Query: 2040 gccacacatttgagcagtttgagcataatccttctgtgtcatagttagatctgttcctaa 2099
||||| | |||||| |||||||| ||||| |||||||| |||| ||||| |||
Sbjct: 1624 accacatacttgagcggtttgagcgtaatctctctgtgtcgagcttagttctgtatctag 1565
Query: 2100 aagcatatccagcattccaaggacgccattcataggtgttctgatctcatgtgacgcagt 2159
|||||| | |||||||| || | ||||||||| ||||| |||||||| || ||| | ||
Sbjct: 1564 gagcatagcaagcattccgagaatgccattcattggtgtcctgatctcgtgagacacggt 1505
Query: 2160 tgccaggaactgagattttgcaacatcagcagcttctgc 2198
|| || ||||| ||||| || |||||||||||||||||
Sbjct: 1504 agcaagaaactgcgatttagcgacatcagcagcttctgc 1466
Score = 75.8 bits (38), Expect = 4e-011
Identities = 113/138 (81%)
Strand = Plus / Minus
Query: 1314 gaacgtgcttccaacagaaggatggctggtgaaacttatctgcccacccataagttcagc 1373
|||||||||||||| | ||| |||| ||||| ||||||| |||| |||||||||| |
Sbjct: 2326 gaacgtgcttccaatatgaggccggcttatgaaatttatctgaccacgcataagttcaac 2267
Query: 1374 tagacacttgctgatgcttaaaccgatgccagtaccaccataattccttgaagttgaact 1433
||||||||||| || || ||||| || |||||||| ||||| || |||||||| || ||
Sbjct: 2266 aagacacttgcttatactcaaaccaataccagtacctccatagtttcttgaagtcgagct 2207
Query: 1434 gtcagcctgcataaacgg 1451
|| || |||||||||||
Sbjct: 2206 atctgcttgcataaacgg 2189
>emb|AJ278529.1|ATH278529 Arabidopsis thaliana mRNA for putative histidine kinase receptor (wol
gene), splice variant 2
Length = 3503
Score = 101 bits (51), Expect = 8e-019
Identities = 177/219 (80%)
Strand = Plus / Minus
Query: 1980 ctttccagcctcaatctttgctcgatcaaggacatcatttatcagtgtaatcaatgctct 2039
||||||||| |||||||| || |||||||| || |||||||||| || |||||| ||| |
Sbjct: 1567 ctttccagcttcaatcttggcgcgatcaagaacctcatttatcaatgcaatcaaagcttt 1508
Query: 2040 gccacacatttgagcagtttgagcataatccttctgtgtcatagttagatctgttcctaa 2099
||||| | |||||| |||||||| ||||| |||||||| |||| ||||| |||
Sbjct: 1507 accacatacttgagcggtttgagcgtaatctctctgtgtcgagcttagttctgtatctag 1448
Query: 2100 aagcatatccagcattccaaggacgccattcataggtgttctgatctcatgtgacgcagt 2159
|||||| | |||||||| || | ||||||||| ||||| |||||||| || ||| | ||
Sbjct: 1447 gagcatagcaagcattccgagaatgccattcattggtgtcctgatctcgtgagacacggt 1388
Query: 2160 tgccaggaactgagattttgcaacatcagcagcttctgc 2198
|| || ||||| ||||| || |||||||||||||||||
Sbjct: 1387 agcaagaaactgcgatttagcgacatcagcagcttctgc 1349
Score = 75.8 bits (38), Expect = 4e-011
Identities = 113/138 (81%)
Strand = Plus / Minus
Query: 1314 gaacgtgcttccaacagaaggatggctggtgaaacttatctgcccacccataagttcagc 1373
|||||||||||||| | ||| |||| ||||| ||||||| |||| |||||||||| |
Sbjct: 2209 gaacgtgcttccaatatgaggccggcttatgaaatttatctgaccacgcataagttcaac 2150
Query: 1374 tagacacttgctgatgcttaaaccgatgccagtaccaccataattccttgaagttgaact 1433
||||||||||| || || ||||| || |||||||| ||||| || |||||||| || ||
Sbjct: 2149 aagacacttgcttatactcaaaccaataccagtacctccatagtttcttgaagtcgagct 2090
Query: 1434 gtcagcctgcataaacgg 1451
|| || |||||||||||
Sbjct: 2089 atctgcttgcataaacgg 2072
>emb|AJ278530.1|ATH278530 Arabidopsis thaliana mRNA for putative histidine kinase receptor (wol
gene), splice variant 3
Length = 3612
Score = 101 bits (51), Expect = 8e-019
Identities = 177/219 (80%)
Strand = Plus / Minus
Query: 1980 ctttccagcctcaatctttgctcgatcaaggacatcatttatcagtgtaatcaatgctct 2039
||||||||| |||||||| || |||||||| || |||||||||| || |||||| ||| |
Sbjct: 1676 ctttccagcttcaatcttggcgcgatcaagaacctcatttatcaatgcaatcaaagcttt 1617
Query: 2040 gccacacatttgagcagtttgagcataatccttctgtgtcatagttagatctgttcctaa 2099
||||| | |||||| |||||||| ||||| |||||||| |||| ||||| |||
Sbjct: 1616 accacatacttgagcggtttgagcgtaatctctctgtgtcgagcttagttctgtatctag 1557
Query: 2100 aagcatatccagcattccaaggacgccattcataggtgttctgatctcatgtgacgcagt 2159
|||||| | |||||||| || | ||||||||| ||||| |||||||| || ||| | ||
Sbjct: 1556 gagcatagcaagcattccgagaatgccattcattggtgtcctgatctcgtgagacacggt 1497
Query: 2160 tgccaggaactgagattttgcaacatcagcagcttctgc 2198
|| || ||||| ||||| || |||||||||||||||||
Sbjct: 1496 agcaagaaactgcgatttagcgacatcagcagcttctgc 1458
Score = 75.8 bits (38), Expect = 4e-011
Identities = 113/138 (81%)
Strand = Plus / Minus
Query: 1314 gaacgtgcttccaacagaaggatggctggtgaaacttatctgcccacccataagttcagc 1373
|||||||||||||| | ||| |||| ||||| ||||||| |||| |||||||||| |
Sbjct: 2318 gaacgtgcttccaatatgaggccggcttatgaaatttatctgaccacgcataagttcaac 2259
Query: 1374 tagacacttgctgatgcttaaaccgatgccagtaccaccataattccttgaagttgaact 1433
||||||||||| || || ||||| || |||||||| ||||| || |||||||| || ||
Sbjct: 2258 aagacacttgcttatactcaaaccaataccagtacctccatagtttcttgaagtcgagct 2199
Query: 1434 gtcagcctgcataaacgg 1451
|| || |||||||||||
Sbjct: 2198 atctgcttgcataaacgg 2181
>emb|CS063639.1| Sequence 1 from Patent EP1522586
Length = 3174
Score = 101 bits (51), Expect = 8e-019
Identities = 177/219 (80%)
Strand = Plus / Minus
Query: 1980 ctttccagcctcaatctttgctcgatcaaggacatcatttatcagtgtaatcaatgctct 2039
||||||||| |||||||| || |||||||| || |||||||||| || |||||| ||| |
Sbjct: 1545 ctttccagcttcaatcttggcgcgatcaagaacctcatttatcaatgcaatcaaagcttt 1486
Query: 2040 gccacacatttgagcagtttgagcataatccttctgtgtcatagttagatctgttcctaa 2099
||||| | |||||| |||||||| ||||| |||||||| |||| ||||| |||
Sbjct: 1485 accacatacttgagcggtttgagcgtaatctctctgtgtcgagcttagttctgtatctag 1426
Query: 2100 aagcatatccagcattccaaggacgccattcataggtgttctgatctcatgtgacgcagt 2159
|||||| | |||||||| || | ||||||||| ||||| |||||||| || ||| | ||
Sbjct: 1425 gagcatagcaagcattccgagaatgccattcattggtgtcctgatctcgtgagacacggt 1366
Query: 2160 tgccaggaactgagattttgcaacatcagcagcttctgc 2198
|| || ||||| ||||| || |||||||||||||||||
Sbjct: 1365 agcaagaaactgcgatttagcgacatcagcagcttctgc 1327
Score = 77.8 bits (39), Expect = 1e-011
Identities = 129/159 (81%)
Strand = Plus / Minus
Query: 1314 gaacgtgcttccaacagaaggatggctggtgaaacttatctgcccacccataagttcagc 1373
|||||||||||||| | ||| |||| ||||| ||||||| |||| |||||||||| |
Sbjct: 2187 gaacgtgcttccaatatgaggccggcttatgaaatttatctgaccacgcataagttcaac 2128
Query: 1374 tagacacttgctgatgcttaaaccgatgccagtaccaccataattccttgaagttgaact 1433
||||||||||| || || ||||| || |||||||| ||||| || |||||||| || ||
Sbjct: 2127 aagacacttgcttatactcaaaccaataccagtacctccatagtttcttgaagtcgagct 2068
Query: 1434 gtcagcctgcataaacggtgtaaaaacacgatcttgtgc 1472
|| || ||||||||||| |||| ||||| |||||||
Sbjct: 2067 atctgcttgcataaacggcataaacacacggccttgtgc 2029
>ref|NM_126244.2| Arabidopsis thaliana WOL (CYTOKININ RESPONSE 1) AT2G01830 (WOL)
transcript variant AT2G01830.1 mRNA, complete cds
Length = 3637
Score = 101 bits (51), Expect = 8e-019
Identities = 177/219 (80%)
Strand = Plus / Minus
Query: 1980 ctttccagcctcaatctttgctcgatcaaggacatcatttatcagtgtaatcaatgctct 2039
||||||||| |||||||| || |||||||| || |||||||||| || |||||| ||| |
Sbjct: 1679 ctttccagcttcaatcttggcgcgatcaagaacctcatttatcaatgcaatcaaagcttt 1620
Query: 2040 gccacacatttgagcagtttgagcataatccttctgtgtcatagttagatctgttcctaa 2099
||||| | |||||| |||||||| ||||| |||||||| |||| ||||| |||
Sbjct: 1619 accacatacttgagcggtttgagcgtaatctctctgtgtcgagcttagttctgtatctag 1560
Query: 2100 aagcatatccagcattccaaggacgccattcataggtgttctgatctcatgtgacgcagt 2159
|||||| | |||||||| || | ||||||||| ||||| |||||||| || ||| | ||
Sbjct: 1559 gagcatagcaagcattccgagaatgccattcattggtgtcctgatctcgtgagacacggt 1500
Query: 2160 tgccaggaactgagattttgcaacatcagcagcttctgc 2198
|| || ||||| ||||| || |||||||||||||||||
Sbjct: 1499 agcaagaaactgcgatttagcgacatcagcagcttctgc 1461
Score = 75.8 bits (38), Expect = 4e-011
Identities = 113/138 (81%)
Strand = Plus / Minus
Query: 1314 gaacgtgcttccaacagaaggatggctggtgaaacttatctgcccacccataagttcagc 1373
|||||||||||||| | ||| |||| ||||| ||||||| |||| |||||||||| |
Sbjct: 2321 gaacgtgcttccaatatgaggccggcttatgaaatttatctgaccacgcataagttcaac 2262
Query: 1374 tagacacttgctgatgcttaaaccgatgccagtaccaccataattccttgaagttgaact 1433
||||||||||| || || ||||| || |||||||| ||||| || |||||||| || ||
Sbjct: 2261 aagacacttgcttatactcaaaccaataccagtacctccatagtttcttgaagtcgagct 2202
Query: 1434 gtcagcctgcataaacgg 1451
|| || |||||||||||
Sbjct: 2201 atctgcttgcataaacgg 2184
>ref|NM_179594.1| Arabidopsis thaliana WOL (CYTOKININ RESPONSE 1) AT2G01830 (WOL)
transcript variant AT2G01830.2 mRNA, complete cds
Length = 3658
Score = 101 bits (51), Expect = 8e-019
Identities = 177/219 (80%)
Strand = Plus / Minus
Query: 1980 ctttccagcctcaatctttgctcgatcaaggacatcatttatcagtgtaatcaatgctct 2039
||||||||| |||||||| || |||||||| || |||||||||| || |||||| ||| |
Sbjct: 1680 ctttccagcttcaatcttggcgcgatcaagaacctcatttatcaatgcaatcaaagcttt 1621
Query: 2040 gccacacatttgagcagtttgagcataatccttctgtgtcatagttagatctgttcctaa 2099
||||| | |||||| |||||||| ||||| |||||||| |||| ||||| |||
Sbjct: 1620 accacatacttgagcggtttgagcgtaatctctctgtgtcgagcttagttctgtatctag 1561
Query: 2100 aagcatatccagcattccaaggacgccattcataggtgttctgatctcatgtgacgcagt 2159
|||||| | |||||||| || | ||||||||| ||||| |||||||| || ||| | ||
Sbjct: 1560 gagcatagcaagcattccgagaatgccattcattggtgtcctgatctcgtgagacacggt 1501
Query: 2160 tgccaggaactgagattttgcaacatcagcagcttctgc 2198
|| || ||||| ||||| || |||||||||||||||||
Sbjct: 1500 agcaagaaactgcgatttagcgacatcagcagcttctgc 1462
Score = 75.8 bits (38), Expect = 4e-011
Identities = 113/138 (81%)
Strand = Plus / Minus
Query: 1314 gaacgtgcttccaacagaaggatggctggtgaaacttatctgcccacccataagttcagc 1373
|||||||||||||| | ||| |||| ||||| ||||||| |||| |||||||||| |
Sbjct: 2322 gaacgtgcttccaatatgaggccggcttatgaaatttatctgaccacgcataagttcaac 2263
Query: 1374 tagacacttgctgatgcttaaaccgatgccagtaccaccataattccttgaagttgaact 1433
||||||||||| || || ||||| || |||||||| ||||| || |||||||| || ||
Sbjct: 2262 aagacacttgcttatactcaaaccaataccagtacctccatagtttcttgaagtcgagct 2203
Query: 1434 gtcagcctgcataaacgg 1451
|| || |||||||||||
Sbjct: 2202 atctgcttgcataaacgg 2185
>ref|NM_201667.1| Arabidopsis thaliana WOL (CYTOKININ RESPONSE 1) AT2G01830 (WOL)
transcript variant AT2G01830.3 mRNA, complete cds
Length = 3654
Score = 101 bits (51), Expect = 8e-019
Identities = 177/219 (80%)
Strand = Plus / Minus
Query: 1980 ctttccagcctcaatctttgctcgatcaaggacatcatttatcagtgtaatcaatgctct 2039
||||||||| |||||||| || |||||||| || |||||||||| || |||||| ||| |
Sbjct: 1676 ctttccagcttcaatcttggcgcgatcaagaacctcatttatcaatgcaatcaaagcttt 1617
Query: 2040 gccacacatttgagcagtttgagcataatccttctgtgtcatagttagatctgttcctaa 2099
||||| | |||||| |||||||| ||||| |||||||| |||| ||||| |||
Sbjct: 1616 accacatacttgagcggtttgagcgtaatctctctgtgtcgagcttagttctgtatctag 1557
Query: 2100 aagcatatccagcattccaaggacgccattcataggtgttctgatctcatgtgacgcagt 2159
|||||| | |||||||| || | ||||||||| ||||| |||||||| || ||| | ||
Sbjct: 1556 gagcatagcaagcattccgagaatgccattcattggtgtcctgatctcgtgagacacggt 1497
Query: 2160 tgccaggaactgagattttgcaacatcagcagcttctgc 2198
|| || ||||| ||||| || |||||||||||||||||
Sbjct: 1496 agcaagaaactgcgatttagcgacatcagcagcttctgc 1458
Score = 75.8 bits (38), Expect = 4e-011
Identities = 113/138 (81%)
Strand = Plus / Minus
Query: 1314 gaacgtgcttccaacagaaggatggctggtgaaacttatctgcccacccataagttcagc 1373
|||||||||||||| | ||| |||| ||||| ||||||| |||| |||||||||| |
Sbjct: 2318 gaacgtgcttccaatatgaggccggcttatgaaatttatctgaccacgcataagttcaac 2259
Query: 1374 tagacacttgctgatgcttaaaccgatgccagtaccaccataattccttgaagttgaact 1433
||||||||||| || || ||||| || |||||||| ||||| || |||||||| || ||
Sbjct: 2258 aagacacttgcttatactcaaaccaataccagtacctccatagtttcttgaagtcgagct 2199
Query: 1434 gtcagcctgcataaacgg 1451
|| || |||||||||||
Sbjct: 2198 atctgcttgcataaacgg 2181
>dbj|DD159606.1| Transformed Cell co-expressing both of cytokinin receptor and
cytokinin biosynthesizing enzyme
Length = 3174
Score = 101 bits (51), Expect = 8e-019
Identities = 177/219 (80%)
Strand = Plus / Minus
Query: 1980 ctttccagcctcaatctttgctcgatcaaggacatcatttatcagtgtaatcaatgctct 2039
||||||||| |||||||| || |||||||| || |||||||||| || |||||| ||| |
Sbjct: 1545 ctttccagcttcaatcttggcgcgatcaagaacctcatttatcaatgcaatcaaagcttt 1486
Query: 2040 gccacacatttgagcagtttgagcataatccttctgtgtcatagttagatctgttcctaa 2099
||||| | |||||| |||||||| ||||| |||||||| |||| ||||| |||
Sbjct: 1485 accacatacttgagcggtttgagcgtaatctctctgtgtcgagcttagttctgtatctag 1426
Query: 2100 aagcatatccagcattccaaggacgccattcataggtgttctgatctcatgtgacgcagt 2159
|||||| | |||||||| || | ||||||||| ||||| |||||||| || ||| | ||
Sbjct: 1425 gagcatagcaagcattccgagaatgccattcattggtgtcctgatctcgtgagacacggt 1366
Query: 2160 tgccaggaactgagattttgcaacatcagcagcttctgc 2198
|| || ||||| ||||| || |||||||||||||||||
Sbjct: 1365 agcaagaaactgcgatttagcgacatcagcagcttctgc 1327
Score = 77.8 bits (39), Expect = 1e-011
Identities = 129/159 (81%)
Strand = Plus / Minus
Query: 1314 gaacgtgcttccaacagaaggatggctggtgaaacttatctgcccacccataagttcagc 1373
|||||||||||||| | ||| |||| ||||| ||||||| |||| |||||||||| |
Sbjct: 2187 gaacgtgcttccaatatgaggccggcttatgaaatttatctgaccacgcataagttcaac 2128
Query: 1374 tagacacttgctgatgcttaaaccgatgccagtaccaccataattccttgaagttgaact 1433
||||||||||| || || ||||| || |||||||| ||||| || |||||||| || ||
Sbjct: 2127 aagacacttgcttatactcaaaccaataccagtacctccatagtttcttgaagtcgagct 2068
Query: 1434 gtcagcctgcataaacggtgtaaaaacacgatcttgtgc 1472
|| || ||||||||||| |||| ||||| |||||||
Sbjct: 2067 atctgcttgcataaacggcataaacacacggccttgtgc 2029
>gb|AV553937.1|AV553937 AV553937 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ76g04R 5', mRNA sequence
Length = 522
Score = 75.8 bits (38), Expect = 4e-011
Identities = 113/138 (81%)
Strand = Plus / Minus
Query: 1314 gaacgtgcttccaacagaaggatggctggtgaaacttatctgcccacccataagttcagc 1373
|||||||||||||| | ||| |||| ||||| ||||||| |||| |||||||||| |
Sbjct: 474 gaacgtgcttccaatatgaggccggcttatgaaatttatctgaccacgcataagttcaac 415
Query: 1374 tagacacttgctgatgcttaaaccgatgccagtaccaccataattccttgaagttgaact 1433
||||||||||| || || ||||| || |||||||| ||||| || |||||||| || ||
Sbjct: 414 aagacacttgcttatactcaaaccaataccagtacctccatagtttcttgaagtcgagct 355
Query: 1434 gtcagcctgcataaacgg 1451
|| || |||||||||||
Sbjct: 354 atctgcttgcataaacgg 337
>gb|AC007069.6| Arabidopsis thaliana chromosome 2 clone T23K3 map mi320, complete
sequence
Length = 73009
Score = 75.8 bits (38), Expect = 4e-011
Identities = 113/138 (81%)
Strand = Plus / Plus
Query: 1314 gaacgtgcttccaacagaaggatggctggtgaaacttatctgcccacccataagttcagc 1373
|||||||||||||| | ||| |||| ||||| ||||||| |||| |||||||||| |
Sbjct: 10605 gaacgtgcttccaatatgaggccggcttatgaaatttatctgaccacgcataagttcaac 10664
Query: 1374 tagacacttgctgatgcttaaaccgatgccagtaccaccataattccttgaagttgaact 1433
||||||||||| || || ||||| || |||||||| ||||| || |||||||| || ||
Sbjct: 10665 aagacacttgcttatactcaaaccaataccagtacctccatagtttcttgaagtcgagct 10724
Query: 1434 gtcagcctgcataaacgg 1451
|| || |||||||||||
Sbjct: 10725 atctgcttgcataaacgg 10742
Score = 54.0 bits (27), Expect = 2e-004
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 2124 gccattcataggtgttctgatctcatgtgacgcagttgccaggaactgagattttgcaac 2183
||||||||| ||||| |||||||| || ||| | || || || ||||| ||||| || ||
Sbjct: 11645 gccattcattggtgtcctgatctcgtgagacacggtagcaagaaactgcgatttagcgac 11704
Query: 2184 atcagcagcttctgc 2198
|||||||||||||||
Sbjct: 11705 atcagcagcttctgc 11719
Score = 44.1 bits (22), Expect = 0.16
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 590 acccgtccatctctggcatctgaacatccataaaacatgcatcgaa 635
|||||||||||| |||||| |||| |||||| || || ||||||||
Sbjct: 9848 acccgtccatctgtggcatttgaatatccatgaagcaagcatcgaa 9893
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 75.8 bits (38), Expect = 4e-011
Identities = 113/138 (81%)
Strand = Plus / Plus
Query: 1314 gaacgtgcttccaacagaaggatggctggtgaaacttatctgcccacccataagttcagc 1373
|||||||||||||| | ||| |||| ||||| ||||||| |||| |||||||||| |
Sbjct: 364459 gaacgtgcttccaatatgaggccggcttatgaaatttatctgaccacgcataagttcaac 364518
Query: 1374 tagacacttgctgatgcttaaaccgatgccagtaccaccataattccttgaagttgaact 1433
||||||||||| || || ||||| || |||||||| ||||| || |||||||| || ||
Sbjct: 364519 aagacacttgcttatactcaaaccaataccagtacctccatagtttcttgaagtcgagct 364578
Query: 1434 gtcagcctgcataaacgg 1451
|| || |||||||||||
Sbjct: 364579 atctgcttgcataaacgg 364596
Score = 54.0 bits (27), Expect = 2e-004
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 2124 gccattcataggtgttctgatctcatgtgacgcagttgccaggaactgagattttgcaac 2183
||||||||| ||||| |||||||| || ||| | || || || ||||| ||||| || ||
Sbjct: 365499 gccattcattggtgtcctgatctcgtgagacacggtagcaagaaactgcgatttagcgac 365558
Query: 2184 atcagcagcttctgc 2198
|||||||||||||||
Sbjct: 365559 atcagcagcttctgc 365573
Score = 44.1 bits (22), Expect = 0.16
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 590 acccgtccatctctggcatctgaacatccataaaacatgcatcgaa 635
|||||||||||| |||||| |||| |||||| || || ||||||||
Sbjct: 363702 acccgtccatctgtggcatttgaatatccatgaagcaagcatcgaa 363747
>dbj|AB046870.1| Arabidopsis thaliana AHK3 mRNA for histidine kinase, complete cds
Length = 3111
Score = 65.9 bits (33), Expect = 4e-008
Identities = 84/101 (83%)
Strand = Plus / Minus
Query: 2100 aagcatatccagcattccaaggacgccattcataggtgttctgatctcatgtgacgcagt 2159
|||||||| || |||||| || || |||||||| || |||||||| |||||||| ||||
Sbjct: 1428 aagcatatgcaacattcctagaacaccattcattggagttctgatttcatgtgaaacagt 1369
Query: 2160 tgccaggaactgagattttgcaacatcagcagcttctgcct 2200
|| |||||||| || ||||||||||| || ||||| ||||
Sbjct: 1368 ggcaaggaactgtgactttgcaacatctgctgcttcagcct 1328
Score = 46.1 bits (23), Expect = 0.039
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 1809 atttgtcagtatctgtcgaaacctccaaggatctccaat 1847
|||||| ||||| ||||||||||||| |||||| |||||
Sbjct: 1719 atttgtgagtatttgtcgaaacctcccaggatcaccaat 1681
>emb|AX507714.1| Sequence 2409 from Patent WO0216655
Length = 3279
Score = 65.9 bits (33), Expect = 4e-008
Identities = 84/101 (83%)
Strand = Plus / Minus
Query: 2100 aagcatatccagcattccaaggacgccattcataggtgttctgatctcatgtgacgcagt 2159
|||||||| || |||||| || || |||||||| || |||||||| |||||||| ||||
Sbjct: 1524 aagcatatgcaacattcctagaacaccattcattggagttctgatttcatgtgaaacagt 1465
Query: 2160 tgccaggaactgagattttgcaacatcagcagcttctgcct 2200
|| |||||||| || ||||||||||| || ||||| ||||
Sbjct: 1464 ggcaaggaactgtgactttgcaacatctgctgcttcagcct 1424
Score = 46.1 bits (23), Expect = 0.039
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 1809 atttgtcagtatctgtcgaaacctccaaggatctccaat 1847
|||||| ||||| ||||||||||||| |||||| |||||
Sbjct: 1815 atttgtgagtatttgtcgaaacctcccaggatcaccaat 1777
>emb|AX537477.1| Sequence 3 from Patent EP1241182
Length = 3111
Score = 65.9 bits (33), Expect = 4e-008
Identities = 84/101 (83%)
Strand = Plus / Minus
Query: 2100 aagcatatccagcattccaaggacgccattcataggtgttctgatctcatgtgacgcagt 2159
|||||||| || |||||| || || |||||||| || |||||||| |||||||| ||||
Sbjct: 1428 aagcatatgcaacattcctagaacaccattcattggagttctgatttcatgtgaaacagt 1369
Query: 2160 tgccaggaactgagattttgcaacatcagcagcttctgcct 2200
|| |||||||| || ||||||||||| || ||||| ||||
Sbjct: 1368 ggcaaggaactgtgactttgcaacatctgctgcttcagcct 1328
Score = 46.1 bits (23), Expect = 0.039
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 1809 atttgtcagtatctgtcgaaacctccaaggatctccaat 1847
|||||| ||||| ||||||||||||| |||||| |||||
Sbjct: 1719 atttgtgagtatttgtcgaaacctcccaggatcaccaat 1681
>emb|CS063643.1| Sequence 5 from Patent EP1522586
Length = 3111
Score = 65.9 bits (33), Expect = 4e-008
Identities = 84/101 (83%)
Strand = Plus / Minus
Query: 2100 aagcatatccagcattccaaggacgccattcataggtgttctgatctcatgtgacgcagt 2159
|||||||| || |||||| || || |||||||| || |||||||| |||||||| ||||
Sbjct: 1428 aagcatatgcaacattcctagaacaccattcattggagttctgatttcatgtgaaacagt 1369
Query: 2160 tgccaggaactgagattttgcaacatcagcagcttctgcct 2200
|| |||||||| || ||||||||||| || ||||| ||||
Sbjct: 1368 ggcaaggaactgtgactttgcaacatctgctgcttcagcct 1328
Score = 46.1 bits (23), Expect = 0.039
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 1809 atttgtcagtatctgtcgaaacctccaaggatctccaat 1847
|||||| ||||| ||||||||||||| |||||| |||||
Sbjct: 1719 atttgtgagtatttgtcgaaacctcccaggatcaccaat 1681
>ref|NM_102494.2| Arabidopsis thaliana AHK3 (ARABIDOPSIS HISTIDINE KINASE 3) AT1G27320
(AHK3) mRNA, complete cds
Length = 3283
Score = 65.9 bits (33), Expect = 4e-008
Identities = 84/101 (83%)
Strand = Plus / Minus
Query: 2100 aagcatatccagcattccaaggacgccattcataggtgttctgatctcatgtgacgcagt 2159
|||||||| || |||||| || || |||||||| || |||||||| |||||||| ||||
Sbjct: 1428 aagcatatgcaacattcctagaacaccattcattggagttctgatttcatgtgaaacagt 1369
Query: 2160 tgccaggaactgagattttgcaacatcagcagcttctgcct 2200
|| |||||||| || ||||||||||| || ||||| ||||
Sbjct: 1368 ggcaaggaactgtgactttgcaacatctgctgcttcagcct 1328
Score = 46.1 bits (23), Expect = 0.039
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 1809 atttgtcagtatctgtcgaaacctccaaggatctccaat 1847
|||||| ||||| ||||||||||||| |||||| |||||
Sbjct: 1719 atttgtgagtatttgtcgaaacctcccaggatcaccaat 1681
>dbj|DD159608.1| Transformed Cell co-expressing both of cytokinin receptor and
cytokinin biosynthesizing enzyme
Length = 3111
Score = 65.9 bits (33), Expect = 4e-008
Identities = 84/101 (83%)
Strand = Plus / Minus
Query: 2100 aagcatatccagcattccaaggacgccattcataggtgttctgatctcatgtgacgcagt 2159
|||||||| || |||||| || || |||||||| || |||||||| |||||||| ||||
Sbjct: 1428 aagcatatgcaacattcctagaacaccattcattggagttctgatttcatgtgaaacagt 1369
Query: 2160 tgccaggaactgagattttgcaacatcagcagcttctgcct 2200
|| |||||||| || ||||||||||| || ||||| ||||
Sbjct: 1368 ggcaaggaactgtgactttgcaacatctgctgcttcagcct 1328
Score = 46.1 bits (23), Expect = 0.039
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 1809 atttgtcagtatctgtcgaaacctccaaggatctccaat 1847
|||||| ||||| ||||||||||||| |||||| |||||
Sbjct: 1719 atttgtgagtatttgtcgaaacctcccaggatcaccaat 1681
>gb|BP839719.1|BP839719 BP839719 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-27-P09 5',
mRNA sequence
Length = 391
Score = 58.0 bits (29), Expect = 1e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 400 ggtttagatacgtatccatccattcccgattttatgcactcttcgtaagttgcctggata 459
||||| ||||| || ||||||||||| |||| ||||| ||||| | ||| ||||| |||
Sbjct: 213 ggttttgatacataaccatccattccacatttcatgcattcttcatgagtagcctgaata 154
Query: 460 acatcggctgtcattgc 476
||||| |||||||||||
Sbjct: 153 acatctgctgtcattgc 137
>dbj|AB046869.1| Arabidopsis thaliana AHK2 mRNA for histidine kinase, complete cds
Length = 3531
Score = 58.0 bits (29), Expect = 1e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 400 ggtttagatacgtatccatccattcccgattttatgcactcttcgtaagttgcctggata 459
||||| ||||| || ||||||||||| |||| ||||| ||||| | ||| ||||| |||
Sbjct: 3476 ggttttgatacataaccatccattccacatttcatgcattcttcatgagtagcctgaata 3417
Query: 460 acatcggctgtcattgc 476
||||| |||||||||||
Sbjct: 3416 acatctgctgtcattgc 3400
>emb|AX537475.1| Sequence 1 from Patent EP1241182
Length = 3531
Score = 58.0 bits (29), Expect = 1e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 400 ggtttagatacgtatccatccattcccgattttatgcactcttcgtaagttgcctggata 459
||||| ||||| || ||||||||||| |||| ||||| ||||| | ||| ||||| |||
Sbjct: 3476 ggttttgatacataaccatccattccacatttcatgcattcttcatgagtagcctgaata 3417
Query: 460 acatcggctgtcattgc 476
||||| |||||||||||
Sbjct: 3416 acatctgctgtcattgc 3400
>gb|BT002530.1| Arabidopsis thaliana histidine kinase-like protein (At5g35750) mRNA,
complete cds
Length = 2347
Score = 58.0 bits (29), Expect = 1e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 400 ggtttagatacgtatccatccattcccgattttatgcactcttcgtaagttgcctggata 459
||||| ||||| || ||||||||||| |||| ||||| ||||| | ||| ||||| |||
Sbjct: 1924 ggttttgatacataaccatccattccacatttcatgcattcttcatgagtagcctgaata 1865
Query: 460 acatcggctgtcattgc 476
||||| |||||||||||
Sbjct: 1864 acatctgctgtcattgc 1848
>gb|BT008407.1| Arabidopsis thaliana At5g35750 gene, complete cds
Length = 1959
Score = 58.0 bits (29), Expect = 1e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 400 ggtttagatacgtatccatccattcccgattttatgcactcttcgtaagttgcctggata 459
||||| ||||| || ||||||||||| |||| ||||| ||||| | ||| ||||| |||
Sbjct: 1904 ggttttgatacataaccatccattccacatttcatgcattcttcatgagtagcctgaata 1845
Query: 460 acatcggctgtcattgc 476
||||| |||||||||||
Sbjct: 1844 acatctgctgtcattgc 1828
>dbj|AB011485.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXH1
Length = 87210
Score = 58.0 bits (29), Expect = 1e-005
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 400 ggtttagatacgtatccatccattcccgattttatgcactcttcgtaagttgcctggata 459
||||| ||||| || ||||||||||| |||| ||||| ||||| | ||| ||||| |||
Sbjct: 57701 ggttttgatacataaccatccattccacatttcatgcattcttcatgagtagcctgaata 57760
Query: 460 acatcggctgtcattgc 476
||||| |||||||||||
Sbjct: 57761 acatctgctgtcattgc 57777
>dbj|AK175733.1| Arabidopsis thaliana mRNA for histidine kinase (AHK2), complete
cds, clone: RAFL22-27-P09
Length = 625
Score = 58.0 bits (29), Expect = 1e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 400 ggtttagatacgtatccatccattcccgattttatgcactcttcgtaagttgcctggata 459
||||| ||||| || ||||||||||| |||| ||||| ||||| | ||| ||||| |||
Sbjct: 212 ggttttgatacataaccatccattccacatttcatgcattcttcatgagtagcctgaata 153
Query: 460 acatcggctgtcattgc 476
||||| |||||||||||
Sbjct: 152 acatctgctgtcattgc 136
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 58.0 bits (29), Expect = 1e-005
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 400 ggtttagatacgtatccatccattcccgattttatgcactcttcgtaagttgcctggata 459
||||| ||||| || ||||||||||| |||| ||||| ||||| | ||| ||||| |||
Sbjct: 12935173 ggttttgatacataaccatccattccacatttcatgcattcttcatgagtagcctgaata 12935232
Query: 460 acatcggctgtcattgc 476
||||| |||||||||||
Sbjct: 12935233 acatctgctgtcattgc 12935249
>emb|CS063641.1| Sequence 3 from Patent EP1522586
Length = 3531
Score = 58.0 bits (29), Expect = 1e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 400 ggtttagatacgtatccatccattcccgattttatgcactcttcgtaagttgcctggata 459
||||| ||||| || ||||||||||| |||| ||||| ||||| | ||| ||||| |||
Sbjct: 3476 ggttttgatacataaccatccattccacatttcatgcattcttcatgagtagcctgaata 3417
Query: 460 acatcggctgtcattgc 476
||||| |||||||||||
Sbjct: 3416 acatctgctgtcattgc 3400
>ref|NM_122966.2| Arabidopsis thaliana AHK2 (ARABIDOPSIS HISTIDINE KINASE 2) AT5G35750
(AHK2) mRNA, complete cds
Length = 3903
Score = 58.0 bits (29), Expect = 1e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 400 ggtttagatacgtatccatccattcccgattttatgcactcttcgtaagttgcctggata 459
||||| ||||| || ||||||||||| |||| ||||| ||||| | ||| ||||| |||
Sbjct: 3476 ggttttgatacataaccatccattccacatttcatgcattcttcatgagtagcctgaata 3417
Query: 460 acatcggctgtcattgc 476
||||| |||||||||||
Sbjct: 3416 acatctgctgtcattgc 3400
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 58.0 bits (29), Expect = 1e-005
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 400 ggtttagatacgtatccatccattcccgattttatgcactcttcgtaagttgcctggata 459
||||| ||||| || ||||||||||| |||| ||||| ||||| | ||| ||||| |||
Sbjct: 13929028 ggttttgatacataaccatccattccacatttcatgcattcttcatgagtagcctgaata 13929087
Query: 460 acatcggctgtcattgc 476
||||| |||||||||||
Sbjct: 13929088 acatctgctgtcattgc 13929104
>dbj|DD159607.1| Transformed Cell co-expressing both of cytokinin receptor and
cytokinin biosynthesizing enzyme
Length = 3531
Score = 58.0 bits (29), Expect = 1e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 400 ggtttagatacgtatccatccattcccgattttatgcactcttcgtaagttgcctggata 459
||||| ||||| || ||||||||||| |||| ||||| ||||| | ||| ||||| |||
Sbjct: 3476 ggttttgatacataaccatccattccacatttcatgcattcttcatgagtagcctgaata 3417
Query: 460 acatcggctgtcattgc 476
||||| |||||||||||
Sbjct: 3416 acatctgctgtcattgc 3400
>gb|CL507516.1|CL507516 SAIL_781_H04.v3 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_781_H04.v3, DNA sequence
Length = 1041
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3285 ctcctcctcctctttctcttcctc 3308
||||||||||||||||||||||||
Sbjct: 771 ctcctcctcctctttctcttcctc 794
>gb|BH848027.1|BH848027 SALK_067380.55.50.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_067380.55.50.x,
DNA sequence
Length = 340
Score = 46.1 bits (23), Expect = 0.039
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 1809 atttgtcagtatctgtcgaaacctccaaggatctccaat 1847
|||||| ||||| ||||||||||||| |||||| |||||
Sbjct: 91 atttgtgagtatttgtcgaaacctcccaggatcaccaat 53
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 46.1 bits (23), Expect = 0.039
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 1809 atttgtcagtatctgtcgaaacctccaaggatctccaat 1847
|||||| ||||| ||||||||||||| |||||| |||||
Sbjct: 9499243 atttgtgagtatttgtcgaaacctcccaggatcaccaat 9499205
>gb|AC004557.2|AC004557 Genomic sequence for Arabidopsis thaliana BAC F17L21 from chromosome I,
complete sequence
Length = 99690
Score = 46.1 bits (23), Expect = 0.039
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 1809 atttgtcagtatctgtcgaaacctccaaggatctccaat 1847
|||||| ||||| ||||||||||||| |||||| |||||
Sbjct: 34345 atttgtgagtatttgtcgaaacctcccaggatcaccaat 34307
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 46.1 bits (23), Expect = 0.039
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 1809 atttgtcagtatctgtcgaaacctccaaggatctccaat 1847
|||||| ||||| ||||||||||||| |||||| |||||
Sbjct: 9490447 atttgtgagtatttgtcgaaacctcccaggatcaccaat 9490409
>emb|AL085495.1|CNS00Q8P Arabidopsis thaliana genome survey sequence T7 end of BAC F10N21 of
IGF library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 471
Score = 44.1 bits (22), Expect = 0.16
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 590 acccgtccatctctggcatctgaacatccataaaacatgcatcgaa 635
|||||||||||| |||||| |||| |||||| || || ||||||||
Sbjct: 408 acccgtccatctgtggcatttgaatatccatgaagcaagcatcgaa 363
>gb|AI992824.1|AI992824 701493722 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701493722, mRNA sequence
Length = 468
Score = 44.1 bits (22), Expect = 0.16
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 580 gttgcctcaaacccgtccatctctggcatctgaa 613
||||| |||||||||||||||| |||||| ||||
Sbjct: 448 gttgcttcaaacccgtccatctgtggcatttgaa 415
>gb|BP593781.1|BP593781 BP593781 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-23-H02 3',
mRNA sequence
Length = 429
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 525 caacttgttcttcctttcctcg 546
||||||||||||||||||||||
Sbjct: 338 caacttgttcttcctttcctcg 359
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,600,019
Number of Sequences: 1013581
Number of extensions: 1600019
Number of successful extensions: 124614
Number of sequences better than 0.5: 42
Number of HSP's better than 0.5 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 120988
Number of HSP's gapped (non-prelim): 3603
length of query: 3330
length of database: 908,940,872
effective HSP length: 21
effective length of query: 3309
effective length of database: 887,655,671
effective search space: 2937252615339
effective search space used: 2937252615339
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)