BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2943843.2.1
(2639 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|T04250.1|T04250 297 Lambda-PRL2 Arabidopsis thaliana cDN... 94 1e-016
gb|CF651288.1|CF651288 33-E009213w-013-001-A09-T7R MPIZ-ADI... 94 1e-016
gb|CF651289.1|CF651289 33-E021106-013-001-A09-T7R MPIZ-ADIS... 94 1e-016
gb|BX835475.1|BX835475 BX835475 Arabidopsis thaliana Adult ... 94 1e-016
gb|AV441019.1|AV441019 AV441019 Arabidopsis thaliana above-... 94 1e-016
gb|AV523235.1|AV523235 AV523235 Arabidopsis thaliana aboveg... 94 1e-016
gb|AV543478.1|AV543478 AV543478 Arabidopsis thaliana roots ... 94 1e-016
gb|AV561214.1|AV561214 AV561214 Arabidopsis thaliana green ... 94 1e-016
gb|AY518292.1| Arabidopsis thaliana strubbelig receptor fam... 94 1e-016
ref|NM_112293.3| Arabidopsis thaliana ATP binding / protein... 94 1e-016
ref|NM_202582.1| Arabidopsis thaliana ATP binding / protein... 94 1e-016
ref|NM_202583.1| Arabidopsis thaliana ATP binding / protein... 94 1e-016
gb|BP601397.1|BP601397 BP601397 RAFL16 Arabidopsis thaliana... 86 4e-014
gb|AV522124.1|AV522124 AV522124 Arabidopsis thaliana aboveg... 82 6e-013
gb|AY072139.1| Arabidopsis thaliana At3g14350 mRNA sequence 78 9e-012
gb|AV561187.1|AV561187 AV561187 Arabidopsis thaliana green ... 66 3e-008
gb|AY518293.1| Arabidopsis thaliana strubbelig receptor fam... 66 3e-008
ref|NM_118334.3| Arabidopsis thaliana ATP binding / kinase/... 66 3e-008
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 64 1e-007
emb|AL022140.1|ATF1N20 Arabidopsis thaliana DNA chromosome ... 64 1e-007
emb|AL161556.2|ATCHRIV56 Arabidopsis thaliana DNA chromosom... 64 1e-007
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 64 1e-007
dbj|AB022220.1| Arabidopsis thaliana genomic DNA, chromosom... 56 3e-005
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 56 3e-005
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 56 3e-005
gb|AI995888.1|AI995888 701549061 A. thaliana, Columbia Col-... 54 1e-004
gb|AV816177.1|AV816177 AV816177 RAFL9 Arabidopsis thaliana ... 54 1e-004
gb|AV540749.1|AV540749 AV540749 Arabidopsis thaliana roots ... 54 1e-004
gb|AV545733.1|AV545733 AV545733 Arabidopsis thaliana roots ... 54 1e-004
gb|AF325090.1|AF325090 Arabidopsis thaliana putative protei... 54 1e-004
gb|AY080876.1| Arabidopsis thaliana putative protein kinase... 54 1e-004
gb|AY114044.1| Arabidopsis thaliana putative protein kinase... 54 1e-004
emb|AX507538.1| Sequence 2233 from Patent WO0216655 54 1e-004
emb|AX651260.1| Sequence 44 from Patent WO03000898 54 1e-004
gb|AC004411.3| Arabidopsis thaliana chromosome 2 clone F14M... 54 1e-004
emb|BX842071.1|CNS09YAV Arabidopsis thaliana Full-length cD... 54 1e-004
emb|BX819993.1|CNS0A9F9 Arabidopsis thaliana Full-length cD... 54 1e-004
emb|BX819092.1|CNS0A9S2 Arabidopsis thaliana Full-length cD... 54 1e-004
emb|CQ803850.1| Sequence 261 from Patent WO2004035798 54 1e-004
ref|NM_130274.2| Arabidopsis thaliana ATP binding / kinase/... 54 1e-004
ref|NM_001036475.1| Arabidopsis thaliana ATP binding / kina... 54 1e-004
ref|NM_001036476.1| Arabidopsis thaliana ATP binding / kina... 54 1e-004
ref|NM_180136.2| Arabidopsis thaliana ATP binding / kinase/... 54 1e-004
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 54 1e-004
emb|BX655040.1| Arabidopsis thaliana T-DNA flanking sequenc... 52 5e-004
gb|Z34736.1|Z34736 ATTS3496 Strasbourg-A Arabidopsis thalia... 52 5e-004
dbj|AB023031.1| Arabidopsis thaliana genomic DNA, chromosom... 52 5e-004
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 52 5e-004
dbj|AK221316.1| Arabidopsis thaliana mRNA for serine/threon... 52 5e-004
ref|NM_122949.1| Arabidopsis thaliana ATP binding / kinase/... 52 5e-004
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 52 5e-004
gb|AY054533.1| Arabidopsis thaliana putative protein kinase... 50 0.002
gb|BT000153.1| Arabidopsis thaliana putative protein kinase... 50 0.002
emb|AX506183.1| Sequence 878 from Patent WO0216655 50 0.002
gb|AC004450.3| Arabidopsis thaliana chromosome 2 clone F14B... 50 0.002
ref|NM_129885.2| Arabidopsis thaliana ATP binding / kinase/... 50 0.002
emb|BX821944.1|CNS0A97Z Arabidopsis thaliana Full-length cD... 48 0.008
gb|BH852429.1|BH852429 SALK_074637.50.65.x Arabidopsis thal... 46 0.031
emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4... 46 0.031
emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosom... 46 0.031
gb|AQ964178.1|AQ964178 LERGT72TF LERG Arabidopsis thaliana ... 44 0.12
gb|BH857453.1|BH857453 SALK_072576.24.70.x Arabidopsis thal... 44 0.12
gb|BE845240.1|BE845240 AD08G12T7 AD A. thaliana (Col-0 gl1)... 44 0.12
gb|BU635172.1|BU635172 016F11 Infected Arabidopsis Leaf Ara... 44 0.12
gb|CB262176.1|CB262176 72-E8863-008-010-P17-pBl2 MPIZ-ADIS-... 44 0.12
gb|CK119614.1|CK119614 211g15.p1 AtM1 Arabidopsis thaliana ... 44 0.12
gb|CK120262.1|CK120262 208d16.p1 AtM1 Arabidopsis thaliana ... 44 0.12
emb|AL049914.1|F6E21 Arabidopsis thaliana clone F6E21, *** ... 44 0.12
emb|BX831682.1|CNS09ZNH Arabidopsis thaliana Full-length cD... 44 0.12
emb|BX831068.1|CNS0A0N4 Arabidopsis thaliana Full-length cD... 44 0.12
emb|BX832571.1|CNS0A0WM Arabidopsis thaliana Full-length cD... 44 0.12
emb|BX832467.1|CNS0A270 Arabidopsis thaliana Full-length cD... 44 0.12
emb|BX827787.1|CNS0A4M9 Arabidopsis thaliana Full-length cD... 44 0.12
dbj|AB010700.1| Arabidopsis thaliana genomic DNA, chromosom... 44 0.12
dbj|AK117669.1| Arabidopsis thaliana At5g66790 mRNA for unk... 44 0.12
dbj|AK117952.1| Arabidopsis thaliana At5g01020 mRNA for put... 44 0.12
emb|AL161578.2|ATCHRIV74 Arabidopsis thaliana DNA chromosom... 44 0.12
emb|AL137189.2|ATF7J8 Arabidopsis thaliana DNA chromosome 5... 44 0.12
ref|NM_120179.2| Arabidopsis thaliana ATP binding / kinase/... 44 0.12
ref|NM_119260.3| Arabidopsis thaliana kinase AT4G31100 mRNA... 44 0.12
ref|NM_119261.2| Arabidopsis thaliana kinase AT4G31110 mRNA... 44 0.12
ref|NM_126077.3| Arabidopsis thaliana kinase AT5G66790 mRNA... 44 0.12
gb|B61602.1|B61602 T18A20TF TAMU Arabidopsis thaliana genom... 42 0.49
gb|AQ964179.1|AQ964179 LERGT72TR LERG Arabidopsis thaliana ... 42 0.49
gb|BH241716.1|BH241716 ATYQB70TF ATYQ Arabidopsis thaliana ... 42 0.49
gb|BH241872.1|BH241872 ATYQB13TF ATYQ Arabidopsis thaliana ... 42 0.49
gb|CL478295.1|CL478295 SAIL_287_C02.v1 SAIL Collection Arab... 42 0.49
gb|CL500354.1|CL500354 SAIL_680_F05.v1 SAIL Collection Arab... 42 0.49
gb|CW844503.1|CW844503 GT11066.Ds3.11.04.2002.jw57.679 Arab... 42 0.49
gb|AI998153.1|AI998153 701672514 A. thaliana, Columbia Col-... 42 0.49
gb|AI998894.1|AI998894 701547302 A. thaliana, Columbia Col-... 42 0.49
gb|AV782240.1|AV782240 AV782240 RAFL4 Arabidopsis thaliana ... 42 0.49
gb|CB185652.1|CB185652 EST00577 Arabidopsis avirulent Pseud... 42 0.49
gb|BX835582.1|BX835582 BX835582 Arabidopsis thaliana Adult ... 42 0.49
gb|AV554479.1|AV554479 AV554479 Arabidopsis thaliana roots ... 42 0.49
gb|BP572146.1|BP572146 BP572146 RAFL14 Arabidopsis thaliana... 42 0.49
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 42 0.49
gb|U27144.1|ATU27144 Arabidopsis thaliana glycine decarboxy... 42 0.49
gb|AF370260.1| Arabidopsis thaliana putative protein kinase... 42 0.49
gb|AY150374.1| Arabidopsis thaliana putative kinase interac... 42 0.49
emb|AX506574.1| Sequence 1269 from Patent WO0216655 42 0.49
emb|AX506801.1| Sequence 1496 from Patent WO0216655 42 0.49
gb|BT008322.1| Arabidopsis thaliana At1g56720 gene, complet... 42 0.49
gb|BT010600.1| Arabidopsis thaliana At1g53730 gene, complet... 42 0.49
gb|AY219071.1| Arabidopsis thaliana hypothetical protein (A... 42 0.49
gb|AY219073.1| Arabidopsis thaliana hypothetical protein (A... 42 0.49
gb|AY219074.1| Arabidopsis thaliana hypothetical protein (A... 42 0.49
gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 ... 42 0.49
gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis tha... 42 0.49
gb|AC009324.2| Arabidopsis thaliana chromosome I BAC T18A20... 42 0.49
gb|AC011001.2|AC011001 Arabidopsis thaliana chromosome I BA... 42 0.49
gb|AC000103.2|AC000103 Genomic sequence for Arabidopsis tha... 42 0.49
gb|AC004133.3|AC004133 Genomic sequence for Arabidopsis tha... 42 0.49
gb|AC009323.4|AC009323 Arabidopsis thaliana chromosome I BA... 42 0.49
gb|AC024260.4|AC024260 Arabidopsis thaliana chromosome 1 BA... 42 0.49
gb|AC005314.3| Arabidopsis thaliana chromosome 2 clone T32F... 42 0.49
gb|AC006067.4| Arabidopsis thaliana chromosome 2 clone T13P... 42 0.49
gb|AY518291.1| Arabidopsis thaliana strubbelig receptor fam... 42 0.49
emb|BX817253.1|CNS0AD48 Arabidopsis thaliana Full-length cD... 42 0.49
emb|BX817799.1|CNS0AE64 Arabidopsis thaliana Full-length cD... 42 0.49
dbj|AB009054.1| Arabidopsis thaliana genomic DNA, chromosom... 42 0.49
dbj|AB025615.1| Arabidopsis thaliana genomic DNA, chromosom... 42 0.49
emb|CQ804510.1| Sequence 921 from Patent WO2004035798 42 0.49
gb|AY649261.1| Arabidopsis thaliana hypothetical protein (A... 42 0.49
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 42 0.49
ref|NM_100450.1| Arabidopsis thaliana kinase AT1G05700 mRNA... 42 0.49
ref|NM_100547.1| Arabidopsis thaliana ATP binding / kinase/... 42 0.49
ref|NM_102307.1| Arabidopsis thaliana ATP binding / protein... 42 0.49
ref|NM_127014.1| Arabidopsis thaliana kinase AT2G14510 mRNA... 42 0.49
ref|NM_104549.1| Arabidopsis thaliana ATP binding / kinase/... 42 0.49
ref|NM_123301.1| Arabidopsis thaliana ATP binding / protein... 42 0.49
ref|NM_104251.2| Arabidopsis thaliana ATP binding / protein... 42 0.49
ref|NM_129088.2| Arabidopsis thaliana unknown protein AT2G3... 42 0.49
ref|NM_202312.1| Arabidopsis thaliana ATP binding / kinase/... 42 0.49
ref|NM_001035904.1| Arabidopsis thaliana ATP binding / kina... 42 0.49
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 42 0.49
>gb|T04250.1|T04250 297 Lambda-PRL2 Arabidopsis thaliana cDNA clone 34C8T7, mRNA
sequence
Length = 400
Score = 93.7 bits (47), Expect = 1e-016
Identities = 161/199 (80%)
Strand = Plus / Minus
Query: 431 tcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggcc 490
||||||| || |||||||| | | |||||||||||||||||| || ||||| ||||| |
Sbjct: 248 tcatgttagctctctgcaccaatacaaccaatgcttgcaccacttcagacatgggtggtc 189
Query: 491 tgaattctggttcaggctggacacacagggcaaggacatcagcaaatcgggatagagatt 550
| || ||||| || |||||||| || ||||| | ||||| ||||||||||| || ||||
Sbjct: 188 taaactctggctccggctggacgcaaagggcgataacatctgcaaatcgggagagggatt 129
Query: 551 tagctgggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcat 610
|| | |||||||| || ||||| || ||||| ||||| || |||| || || ||||| |
Sbjct: 128 taaccgggtatagccctttgagagctggatcaaccattttgcccaaagcatcaatgtcgt 69
Query: 611 gcagctggggtgttgccca 629
| ||||| |||||||||||
Sbjct: 68 gaagctgaggtgttgccca 50
>gb|CF651288.1|CF651288 33-E009213w-013-001-A09-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770A091Q 5-PRIME, mRNA sequence
Length = 808
Score = 93.7 bits (47), Expect = 1e-016
Identities = 161/199 (80%)
Strand = Plus / Minus
Query: 431 tcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggcc 490
||||||| || |||||||| | | |||||||||||||||||| || ||||| ||||| |
Sbjct: 382 tcatgttagctctctgcaccaatacaaccaatgcttgcaccacttcagacatgggtggtc 323
Query: 491 tgaattctggttcaggctggacacacagggcaaggacatcagcaaatcgggatagagatt 550
| || ||||| || |||||||| || ||||| | ||||| ||||||||||| || ||||
Sbjct: 322 taaactctggctccggctggacgcaaagggcgataacatctgcaaatcgggagagggatt 263
Query: 551 tagctgggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcat 610
|| | |||||||| || ||||| || ||||| ||||| || |||| || || ||||| |
Sbjct: 262 taaccgggtatagccctttgagagctggatcaaccattttgcccaaagcatcaatgtcgt 203
Query: 611 gcagctggggtgttgccca 629
| ||||| |||||||||||
Sbjct: 202 gaagctgaggtgttgccca 184
>gb|CF651289.1|CF651289 33-E021106-013-001-A09-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770A091Q 5-PRIME, mRNA sequence
Length = 804
Score = 93.7 bits (47), Expect = 1e-016
Identities = 161/199 (80%)
Strand = Plus / Minus
Query: 431 tcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggcc 490
||||||| || |||||||| | | |||||||||||||||||| || ||||| ||||| |
Sbjct: 382 tcatgttagctctctgcaccaatacaaccaatgcttgcaccacttcagacatgggtggtc 323
Query: 491 tgaattctggttcaggctggacacacagggcaaggacatcagcaaatcgggatagagatt 550
| || ||||| || |||||||| || ||||| | ||||| ||||||||||| || ||||
Sbjct: 322 taaactctggctccggctggacgcaaagggcgataacatctgcaaatcgggagagggatt 263
Query: 551 tagctgggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcat 610
|| | |||||||| || ||||| || ||||| ||||| || |||| || || ||||| |
Sbjct: 262 taaccgggtatagccctttgagagctggatcaaccattttgcccaaagcatcaatgtcgt 203
Query: 611 gcagctggggtgttgccca 629
| ||||| |||||||||||
Sbjct: 202 gaagctgaggtgttgccca 184
>gb|BX835475.1|BX835475 BX835475 Arabidopsis thaliana Adult vegetative tissue Col-0
Arabidopsis thaliana cDNA clone GSLTLS3ZC02 3PRIM, mRNA
sequence
Length = 875
Score = 93.7 bits (47), Expect = 1e-016
Identities = 161/199 (80%)
Strand = Plus / Plus
Query: 431 tcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggcc 490
||||||| || |||||||| | | |||||||||||||||||| || ||||| ||||| |
Sbjct: 337 tcatgttagctctctgcaccaatacaaccaatgcttgcaccacttcagacatgggtggtc 396
Query: 491 tgaattctggttcaggctggacacacagggcaaggacatcagcaaatcgggatagagatt 550
| || ||||| || |||||||| || ||||| | ||||| ||||||||||| || ||||
Sbjct: 397 taaactctggctccggctggacgcaaagggcgataacatctgcaaatcgggagagggatt 456
Query: 551 tagctgggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcat 610
|| | |||||||| || ||||| || ||||| ||||| || |||| || || ||||| |
Sbjct: 457 taaccgggtatagccctttgagagctggatcaaccattttgcccaaagcatcaatgtcgt 516
Query: 611 gcagctggggtgttgccca 629
| ||||| |||||||||||
Sbjct: 517 gaagctgaggtgttgccca 535
>gb|AV441019.1|AV441019 AV441019 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APZ21g09_f 3', mRNA
sequence
Length = 522
Score = 93.7 bits (47), Expect = 1e-016
Identities = 161/199 (80%)
Strand = Plus / Plus
Query: 431 tcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggcc 490
||||||| || |||||||| | | |||||||||||||||||| || ||||| ||||| |
Sbjct: 255 tcatgttagctctctgcaccaatacaaccaatgcttgcaccacttcagacatgggtggtc 314
Query: 491 tgaattctggttcaggctggacacacagggcaaggacatcagcaaatcgggatagagatt 550
| || ||||| || |||||||| || ||||| | ||||| ||||||||||| || ||||
Sbjct: 315 taaactctggctccggctggacgcaaagggcgataacatctgcaaatcgggagagggatt 374
Query: 551 tagctgggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcat 610
|| | |||||||| || ||||| || ||||| ||||| || |||| || || ||||| |
Sbjct: 375 taaccgggtatagccctttgagagctggatcaaccattttgcccaaagcatcaatgtcgt 434
Query: 611 gcagctggggtgttgccca 629
| ||||| |||||||||||
Sbjct: 435 gaagctgaggtgttgccca 453
>gb|AV523235.1|AV523235 AV523235 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL21c11F 3', mRNA
sequence
Length = 633
Score = 93.7 bits (47), Expect = 1e-016
Identities = 161/199 (80%)
Strand = Plus / Plus
Query: 431 tcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggcc 490
||||||| || |||||||| | | |||||||||||||||||| || ||||| ||||| |
Sbjct: 326 tcatgttagctctctgcaccaatacaaccaatgcttgcaccacttcagacatgggtggtc 385
Query: 491 tgaattctggttcaggctggacacacagggcaaggacatcagcaaatcgggatagagatt 550
| || ||||| || |||||||| || ||||| | ||||| ||||||||||| || ||||
Sbjct: 386 taaactctggctccggctggacgcaaagggcgataacatctgcaaatcgggagagggatt 445
Query: 551 tagctgggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcat 610
|| | |||||||| || ||||| || ||||| ||||| || |||| || || ||||| |
Sbjct: 446 taaccgggtatagccctttgagagctggatcaaccattttgcccaaagcatcaatgtcgt 505
Query: 611 gcagctggggtgttgccca 629
| ||||| |||||||||||
Sbjct: 506 gaagctgaggtgttgccca 524
>gb|AV543478.1|AV543478 AV543478 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ201c07F 3', mRNA sequence
Length = 582
Score = 93.7 bits (47), Expect = 1e-016
Identities = 161/199 (80%)
Strand = Plus / Plus
Query: 431 tcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggcc 490
||||||| || |||||||| | | |||||||||||||||||| || ||||| ||||| |
Sbjct: 380 tcatgttagctctctgcaccaatacaaccaatgcttgcaccacttcagacatgggtggtc 439
Query: 491 tgaattctggttcaggctggacacacagggcaaggacatcagcaaatcgggatagagatt 550
| || ||||| || |||||||| || ||||| | ||||| ||||||||||| || ||||
Sbjct: 440 taaactctggctccggctggacgcaaagggcgataacatctgcaaatcgggagagggatt 499
Query: 551 tagctgggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcat 610
|| | |||||||| || ||||| || ||||| ||||| || |||| || || ||||| |
Sbjct: 500 taaccgggtatagccctttgagagctggatcaaccattttgcccaaagcatcaatgtcgt 559
Query: 611 gcagctggggtgttgccca 629
| ||||| |||||||||||
Sbjct: 560 gaagctgaggtgttgccca 578
>gb|AV561214.1|AV561214 AV561214 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ147f04F 3', mRNA sequence
Length = 567
Score = 93.7 bits (47), Expect = 1e-016
Identities = 161/199 (80%)
Strand = Plus / Plus
Query: 431 tcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggcc 490
||||||| || |||||||| | | |||||||||||||||||| || ||||| ||||| |
Sbjct: 244 tcatgttagctctctgcaccaatacaaccaatgcttgcaccacttcagacatgggtggtc 303
Query: 491 tgaattctggttcaggctggacacacagggcaaggacatcagcaaatcgggatagagatt 550
| || ||||| || |||||||| || ||||| | ||||| ||||||||||| || ||||
Sbjct: 304 taaactctggctccggctggacgcaaagggcgataacatctgcaaatcgggagagggatt 363
Query: 551 tagctgggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcat 610
|| | |||||||| || ||||| || ||||| ||||| || |||| || || ||||| |
Sbjct: 364 taaccgggtatagccctttgagagctggatcaaccattttgcccaaagcatcaatgtcgt 423
Query: 611 gcagctggggtgttgccca 629
| ||||| |||||||||||
Sbjct: 424 gaagctgaggtgttgccca 442
>gb|AY518292.1| Arabidopsis thaliana strubbelig receptor family 7 (SRF7) mRNA,
complete cds
Length = 2459
Score = 93.7 bits (47), Expect = 1e-016
Identities = 161/199 (80%)
Strand = Plus / Minus
Query: 431 tcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggcc 490
||||||| || |||||||| | | |||||||||||||||||| || ||||| ||||| |
Sbjct: 2336 tcatgttagctctctgcaccaatacaaccaatgcttgcaccacttcagacatgggtggtc 2277
Query: 491 tgaattctggttcaggctggacacacagggcaaggacatcagcaaatcgggatagagatt 550
| || ||||| || |||||||| || ||||| | ||||| ||||||||||| || ||||
Sbjct: 2276 taaactctggctccggctggacgcaaagggcgataacatctgcaaatcgggagagggatt 2217
Query: 551 tagctgggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcat 610
|| | |||||||| || ||||| || ||||| ||||| || |||| || || ||||| |
Sbjct: 2216 taaccgggtatagccctttgagagctggatcaaccattttgcccaaagcatcaatgtcgt 2157
Query: 611 gcagctggggtgttgccca 629
| ||||| |||||||||||
Sbjct: 2156 gaagctgaggtgttgccca 2138
>ref|NM_112293.3| Arabidopsis thaliana ATP binding / protein kinase/ protein
serine/threonine kinase/ protein-tyrosine kinase
AT3G14350 transcript variant AT3G14350.1 mRNA, complete
cds
Length = 2680
Score = 93.7 bits (47), Expect = 1e-016
Identities = 161/199 (80%)
Strand = Plus / Minus
Query: 431 tcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggcc 490
||||||| || |||||||| | | |||||||||||||||||| || ||||| ||||| |
Sbjct: 2266 tcatgttagctctctgcaccaatacaaccaatgcttgcaccacttcagacatgggtggtc 2207
Query: 491 tgaattctggttcaggctggacacacagggcaaggacatcagcaaatcgggatagagatt 550
| || ||||| || |||||||| || ||||| | ||||| ||||||||||| || ||||
Sbjct: 2206 taaactctggctccggctggacgcaaagggcgataacatctgcaaatcgggagagggatt 2147
Query: 551 tagctgggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcat 610
|| | |||||||| || ||||| || ||||| ||||| || |||| || || ||||| |
Sbjct: 2146 taaccgggtatagccctttgagagctggatcaaccattttgcccaaagcatcaatgtcgt 2087
Query: 611 gcagctggggtgttgccca 629
| ||||| |||||||||||
Sbjct: 2086 gaagctgaggtgttgccca 2068
>ref|NM_202582.1| Arabidopsis thaliana ATP binding / protein kinase/ protein
serine/threonine kinase/ protein-tyrosine kinase
AT3G14350 transcript variant AT3G14350.2 mRNA, complete
cds
Length = 2812
Score = 93.7 bits (47), Expect = 1e-016
Identities = 161/199 (80%)
Strand = Plus / Minus
Query: 431 tcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggcc 490
||||||| || |||||||| | | |||||||||||||||||| || ||||| ||||| |
Sbjct: 2398 tcatgttagctctctgcaccaatacaaccaatgcttgcaccacttcagacatgggtggtc 2339
Query: 491 tgaattctggttcaggctggacacacagggcaaggacatcagcaaatcgggatagagatt 550
| || ||||| || |||||||| || ||||| | ||||| ||||||||||| || ||||
Sbjct: 2338 taaactctggctccggctggacgcaaagggcgataacatctgcaaatcgggagagggatt 2279
Query: 551 tagctgggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcat 610
|| | |||||||| || ||||| || ||||| ||||| || |||| || || ||||| |
Sbjct: 2278 taaccgggtatagccctttgagagctggatcaaccattttgcccaaagcatcaatgtcgt 2219
Query: 611 gcagctggggtgttgccca 629
| ||||| |||||||||||
Sbjct: 2218 gaagctgaggtgttgccca 2200
>ref|NM_202583.1| Arabidopsis thaliana ATP binding / protein kinase/ protein
serine/threonine kinase/ protein-tyrosine kinase
AT3G14350 transcript variant AT3G14350.3 mRNA, complete
cds
Length = 2596
Score = 93.7 bits (47), Expect = 1e-016
Identities = 161/199 (80%)
Strand = Plus / Minus
Query: 431 tcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggcc 490
||||||| || |||||||| | | |||||||||||||||||| || ||||| ||||| |
Sbjct: 2182 tcatgttagctctctgcaccaatacaaccaatgcttgcaccacttcagacatgggtggtc 2123
Query: 491 tgaattctggttcaggctggacacacagggcaaggacatcagcaaatcgggatagagatt 550
| || ||||| || |||||||| || ||||| | ||||| ||||||||||| || ||||
Sbjct: 2122 taaactctggctccggctggacgcaaagggcgataacatctgcaaatcgggagagggatt 2063
Query: 551 tagctgggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcat 610
|| | |||||||| || ||||| || ||||| ||||| || |||| || || ||||| |
Sbjct: 2062 taaccgggtatagccctttgagagctggatcaaccattttgcccaaagcatcaatgtcgt 2003
Query: 611 gcagctggggtgttgccca 629
| ||||| |||||||||||
Sbjct: 2002 gaagctgaggtgttgccca 1984
>gb|BP601397.1|BP601397 BP601397 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-49-N08 3',
mRNA sequence
Length = 435
Score = 85.7 bits (43), Expect = 4e-014
Identities = 157/195 (80%)
Strand = Plus / Plus
Query: 431 tcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggcc 490
||||||| || |||||||| | | |||||||||||||||||| || ||||| ||||| |
Sbjct: 241 tcatgttagctctctgcaccaatacaaccaatgcttgcaccacttcagacatgggtggtc 300
Query: 491 tgaattctggttcaggctggacacacagggcaaggacatcagcaaatcgggatagagatt 550
| || ||||| || |||||||| || ||||| | ||||| ||||||||||| || ||||
Sbjct: 301 taaactctggctccggctggacgcaaagggcgataacatctgcaaatcgggagagggatt 360
Query: 551 tagctgggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcat 610
|| | |||||||| || ||||| || ||||| ||||| || |||| || || ||||| |
Sbjct: 361 taaccgggtatagccctttgagagctggatcaaccattttgcccaaagcatcaatgtcgt 420
Query: 611 gcagctggggtgttg 625
| ||||| |||||||
Sbjct: 421 gaagctgaggtgttg 435
>gb|AV522124.1|AV522124 AV522124 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ73b01F 3', mRNA
sequence
Length = 565
Score = 81.8 bits (41), Expect = 6e-013
Identities = 128/157 (81%)
Strand = Plus / Plus
Query: 431 tcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggcc 490
||||||| || |||||||| | | |||||||||||||||||| || ||||| ||||| |
Sbjct: 407 tcatgttagctctctgcaccaatacaaccaatgcttgcaccacttcagacatgggtggtc 466
Query: 491 tgaattctggttcaggctggacacacagggcaaggacatcagcaaatcgggatagagatt 550
| || ||||| || |||||||| || ||||| | ||||| ||||||||||| || ||||
Sbjct: 467 taaactctggctccggctggacgcaaagggcgataacatctgcaaatcgggagagggatt 526
Query: 551 tagctgggtatagacccttgagtgcaggatcgaccat 587
|| | |||||||| || ||||| || ||||| |||||
Sbjct: 527 taaccgggtatagccctttgagagctggatcaaccat 563
>gb|AY072139.1| Arabidopsis thaliana At3g14350 mRNA sequence
Length = 2286
Score = 77.8 bits (39), Expect = 9e-012
Identities = 160/199 (80%), Gaps = 1/199 (0%)
Strand = Plus / Minus
Query: 431 tcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggcc 490
||||||| || |||||||| | | |||||||||||||||||| || ||||| ||||| |
Sbjct: 2160 tcatgttagctctctgcaccaatacaaccaatgcttgcaccacttcagacatgggtggtc 2101
Query: 491 tgaattctggttcaggctggacacacagggcaaggacatcagcaaatcgggatagagatt 550
| || ||||| || |||||||| | ||||| | ||||| ||||||||||| || ||||
Sbjct: 2100 taaactctggctccggctggacgaa-agggcgataacatctgcaaatcgggagagggatt 2042
Query: 551 tagctgggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcat 610
|| | |||||||| || ||||| || ||||| ||||| || |||| || || ||||| |
Sbjct: 2041 taaccgggtatagccctttgagagctggatcaaccattttgcccaaagcatcaatgtcgt 1982
Query: 611 gcagctggggtgttgccca 629
| ||||| |||||||||||
Sbjct: 1981 gaagctgaggtgttgccca 1963
>gb|AV561187.1|AV561187 AV561187 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ147b08F 3', mRNA sequence
Length = 530
Score = 65.9 bits (33), Expect = 3e-008
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 465 ttgcaccacctctgacattggtggcctgaattctggttcaggctg 509
||||||||||||||||||||| |||||||| |||||||| |||||
Sbjct: 429 ttgcaccacctctgacattggaggcctgaactctggttccggctg 473
>gb|AY518293.1| Arabidopsis thaliana strubbelig receptor family 8 (SRF8) mRNA,
complete cds
Length = 2580
Score = 65.9 bits (33), Expect = 3e-008
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 465 ttgcaccacctctgacattggtggcctgaattctggttcaggctg 509
||||||||||||||||||||| |||||||| |||||||| |||||
Sbjct: 2109 ttgcaccacctctgacattggaggcctgaactctggttccggctg 2065
>ref|NM_118334.3| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
serine/threonine kinase/ protein-tyrosine kinase
AT4G22130 mRNA, complete cds
Length = 2562
Score = 65.9 bits (33), Expect = 3e-008
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 465 ttgcaccacctctgacattggtggcctgaattctggttcaggctg 509
||||||||||||||||||||| |||||||| |||||||| |||||
Sbjct: 2109 ttgcaccacctctgacattggaggcctgaactctggttccggctg 2065
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 63.9 bits (32), Expect = 1e-007
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 465 ttgcaccacctctgacattggtggcctgaattctggttcaggct 508
||||||||||||||||||||| |||||||| |||||||| ||||
Sbjct: 7639987 ttgcaccacctctgacattggaggcctgaactctggttccggct 7639944
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1361 ttgaaaaatcatcatcatcatca 1383
|||||||||||||||||||||||
Sbjct: 11591354 ttgaaaaatcatcatcatcatca 11591332
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 706 actccaaagctgtaaacatcactctt 731
||||||||||| ||||||||||||||
Sbjct: 11042202 actccaaagctataaacatcactctt 11042177
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 706 actccaaagctgtaaacatcactctt 731
||||||||||| ||||||||||||||
Sbjct: 11038742 actccaaagctataaacatcactctt 11038717
>emb|AL022140.1|ATF1N20 Arabidopsis thaliana DNA chromosome 4, BAC clone F1N20 (ESSA project)
Length = 103270
Score = 63.9 bits (32), Expect = 1e-007
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 465 ttgcaccacctctgacattggtggcctgaattctggttcaggct 508
||||||||||||||||||||| |||||||| |||||||| ||||
Sbjct: 100854 ttgcaccacctctgacattggaggcctgaactctggttccggct 100811
>emb|AL161556.2|ATCHRIV56 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 56
Length = 196247
Score = 63.9 bits (32), Expect = 1e-007
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 465 ttgcaccacctctgacattggtggcctgaattctggttcaggct 508
||||||||||||||||||||| |||||||| |||||||| ||||
Sbjct: 155173 ttgcaccacctctgacattggaggcctgaactctggttccggct 155130
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 63.9 bits (32), Expect = 1e-007
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 465 ttgcaccacctctgacattggtggcctgaattctggttcaggct 508
||||||||||||||||||||| |||||||| |||||||| ||||
Sbjct: 11727232 ttgcaccacctctgacattggaggcctgaactctggttccggct 11727189
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1361 ttgaaaaatcatcatcatcatca 1383
|||||||||||||||||||||||
Sbjct: 15678579 ttgaaaaatcatcatcatcatca 15678557
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 706 actccaaagctgtaaacatcactctt 731
||||||||||| ||||||||||||||
Sbjct: 15129432 actccaaagctataaacatcactctt 15129407
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 706 actccaaagctgtaaacatcactctt 731
||||||||||| ||||||||||||||
Sbjct: 15125972 actccaaagctataaacatcactctt 15125947
>dbj|AB022220.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLN21
Length = 83906
Score = 56.0 bits (28), Expect = 3e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 526 acatcagcaaatcgggatagagatttagctgggtatagacccttgagtgcaggatcgacc 585
||||| ||||||||||| || |||||| | |||||||| || ||||| || ||||| |||
Sbjct: 47442 acatctgcaaatcgggagagggatttaaccgggtatagccctttgagagctggatcaacc 47501
Query: 586 atcctgtccaatgcgtcgatgtcatgcagctggggtgttgccca 629
|| || |||| || || ||||| || ||||| |||||||||||
Sbjct: 47502 attttgcccaaagcatcaatgtcgtgaagctgaggtgttgccca 47545
Score = 46.1 bits (23), Expect = 0.031
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 431 tcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggcc 490
||||||| || |||||||| | | |||||||||||||||||| || ||||| ||||| |
Sbjct: 47269 tcatgttagctctctgcaccaatacaaccaatgcttgcaccacttcagacatgggtggtc 47328
Query: 491 tgaattctggttcaggctg 509
| || ||||| || |||||
Sbjct: 47329 taaactctggctccggctg 47347
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 56.0 bits (28), Expect = 3e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 526 acatcagcaaatcgggatagagatttagctgggtatagacccttgagtgcaggatcgacc 585
||||| ||||||||||| || |||||| | |||||||| || ||||| || ||||| |||
Sbjct: 4773455 acatctgcaaatcgggagagggatttaaccgggtatagccctttgagagctggatcaacc 4773514
Query: 586 atcctgtccaatgcgtcgatgtcatgcagctggggtgttgccca 629
|| || |||| || || ||||| || ||||| |||||||||||
Sbjct: 4773515 attttgcccaaagcatcaatgtcgtgaagctgaggtgttgccca 4773558
Score = 46.1 bits (23), Expect = 0.031
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 431 tcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggcc 490
||||||| || |||||||| | | |||||||||||||||||| || ||||| ||||| |
Sbjct: 4773282 tcatgttagctctctgcaccaatacaaccaatgcttgcaccacttcagacatgggtggtc 4773341
Query: 491 tgaattctggttcaggctg 509
| || ||||| || |||||
Sbjct: 4773342 taaactctggctccggctg 4773360
Score = 42.1 bits (21), Expect = 0.49
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 656 gtctagagctgtcaaatggtc 676
|||||||||||||||||||||
Sbjct: 10903978 gtctagagctgtcaaatggtc 10903998
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 56.0 bits (28), Expect = 3e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 526 acatcagcaaatcgggatagagatttagctgggtatagacccttgagtgcaggatcgacc 585
||||| ||||||||||| || |||||| | |||||||| || ||||| || ||||| |||
Sbjct: 4783351 acatctgcaaatcgggagagggatttaaccgggtatagccctttgagagctggatcaacc 4783410
Query: 586 atcctgtccaatgcgtcgatgtcatgcagctggggtgttgccca 629
|| || |||| || || ||||| || ||||| |||||||||||
Sbjct: 4783411 attttgcccaaagcatcaatgtcgtgaagctgaggtgttgccca 4783454
Score = 46.1 bits (23), Expect = 0.031
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 431 tcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggcc 490
||||||| || |||||||| | | |||||||||||||||||| || ||||| ||||| |
Sbjct: 4783178 tcatgttagctctctgcaccaatacaaccaatgcttgcaccacttcagacatgggtggtc 4783237
Query: 491 tgaattctggttcaggctg 509
| || ||||| || |||||
Sbjct: 4783238 taaactctggctccggctg 4783256
Score = 42.1 bits (21), Expect = 0.49
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 656 gtctagagctgtcaaatggtc 676
|||||||||||||||||||||
Sbjct: 10981699 gtctagagctgtcaaatggtc 10981719
>gb|AI995888.1|AI995888 701549061 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701549061, mRNA sequence
Length = 561
Score = 54.0 bits (27), Expect = 1e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 702 gacaactccaaagctgtaaacatcactcttg 732
|||||||||||||||||| ||||||||||||
Sbjct: 426 gacaactccaaagctgtagacatcactcttg 456
>gb|AV816177.1|AV816177 AV816177 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-89-K12 3',
mRNA sequence
Length = 417
Score = 54.0 bits (27), Expect = 1e-004
Identities = 157/199 (78%), Gaps = 1/199 (0%)
Strand = Plus / Plus
Query: 431 tcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggcc 490
||||||| || |||||||| | | ||||||||||||| |||| || ||||| ||||| |
Sbjct: 112 tcatgttagctctctgcaccaatacaaccaatgcttgccccacttcagacatgggtggtc 171
Query: 491 tgaattctggttcaggctggacacacagggcaaggacatcagcaaatcgggatagagatt 550
| || ||||| || || ||||| | ||||| | ||||| ||||||||||| || ||||
Sbjct: 172 taaactctggctccgggtggacgaa-agggcgataacatctgcaaatcgggagagggatt 230
Query: 551 tagctgggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcat 610
|| | |||||||| || ||||| || ||||| ||||| || ||| || || ||||| |
Sbjct: 231 taaccgggtatagccctttgagagctggatcaaccattttgcccacagcctcaatgtcgt 290
Query: 611 gcagctggggtgttgccca 629
| ||||| |||||||||||
Sbjct: 291 gaagctgaggtgttgccca 309
>gb|AV540749.1|AV540749 AV540749 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ154e03F 3', mRNA sequence
Length = 588
Score = 54.0 bits (27), Expect = 1e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 702 gacaactccaaagctgtaaacatcactcttg 732
|||||||||||||||||| ||||||||||||
Sbjct: 504 gacaactccaaagctgtagacatcactcttg 534
>gb|AV545733.1|AV545733 AV545733 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ97c06F 3', mRNA sequence
Length = 595
Score = 54.0 bits (27), Expect = 1e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 702 gacaactccaaagctgtaaacatcactcttg 732
|||||||||||||||||| ||||||||||||
Sbjct: 439 gacaactccaaagctgtagacatcactcttg 469
>gb|AF325090.1|AF325090 Arabidopsis thaliana putative protein kinase (At2g47060) mRNA,
complete cds
Length = 1098
Score = 54.0 bits (27), Expect = 1e-004
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 702 gacaactccaaagctgtaaacatcactcttg 732
|||||||||||||||||| ||||||||||||
Sbjct: 807 gacaactccaaagctgtagacatcactcttg 777
>gb|AY080876.1| Arabidopsis thaliana putative protein kinase (At2g47060) mRNA,
complete cds
Length = 1298
Score = 54.0 bits (27), Expect = 1e-004
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 702 gacaactccaaagctgtaaacatcactcttg 732
|||||||||||||||||| ||||||||||||
Sbjct: 841 gacaactccaaagctgtagacatcactcttg 811
>gb|AY114044.1| Arabidopsis thaliana putative protein kinase (At2g47060) mRNA,
complete cds
Length = 1129
Score = 54.0 bits (27), Expect = 1e-004
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 702 gacaactccaaagctgtaaacatcactcttg 732
|||||||||||||||||| ||||||||||||
Sbjct: 807 gacaactccaaagctgtagacatcactcttg 777
>emb|AX507538.1| Sequence 2233 from Patent WO0216655
Length = 1098
Score = 54.0 bits (27), Expect = 1e-004
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 702 gacaactccaaagctgtaaacatcactcttg 732
|||||||||||||||||| ||||||||||||
Sbjct: 807 gacaactccaaagctgtagacatcactcttg 777
>emb|AX651260.1| Sequence 44 from Patent WO03000898
Length = 1098
Score = 54.0 bits (27), Expect = 1e-004
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 702 gacaactccaaagctgtaaacatcactcttg 732
|||||||||||||||||| ||||||||||||
Sbjct: 807 gacaactccaaagctgtagacatcactcttg 777
>gb|AC004411.3| Arabidopsis thaliana chromosome 2 clone F14M4 map CIC06C03, complete
sequence
Length = 106329
Score = 54.0 bits (27), Expect = 1e-004
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 702 gacaactccaaagctgtaaacatcactcttg 732
|||||||||||||||||| ||||||||||||
Sbjct: 25980 gacaactccaaagctgtagacatcactcttg 25950
>emb|BX842071.1|CNS09YAV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL37ZD12 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1156
Score = 54.0 bits (27), Expect = 1e-004
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 702 gacaactccaaagctgtaaacatcactcttg 732
|||||||||||||||||| ||||||||||||
Sbjct: 867 gacaactccaaagctgtagacatcactcttg 837
>emb|BX819993.1|CNS0A9F9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS58ZE08 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1462
Score = 54.0 bits (27), Expect = 1e-004
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 702 gacaactccaaagctgtaaacatcactcttg 732
|||||||||||||||||| ||||||||||||
Sbjct: 1037 gacaactccaaagctgtagacatcactcttg 1007
>emb|BX819092.1|CNS0A9S2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB45ZE01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1567
Score = 54.0 bits (27), Expect = 1e-004
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 702 gacaactccaaagctgtaaacatcactcttg 732
|||||||||||||||||| ||||||||||||
Sbjct: 1002 gacaactccaaagctgtagacatcactcttg 972
>emb|CQ803850.1| Sequence 261 from Patent WO2004035798
Length = 1098
Score = 54.0 bits (27), Expect = 1e-004
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 702 gacaactccaaagctgtaaacatcactcttg 732
|||||||||||||||||| ||||||||||||
Sbjct: 807 gacaactccaaagctgtagacatcactcttg 777
>ref|NM_130274.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
serine/threonine kinase/ protein-tyrosine kinase
AT2G47060 transcript variant AT2G47060.1 mRNA, complete
cds
Length = 1404
Score = 54.0 bits (27), Expect = 1e-004
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 702 gacaactccaaagctgtaaacatcactcttg 732
|||||||||||||||||| ||||||||||||
Sbjct: 901 gacaactccaaagctgtagacatcactcttg 871
>ref|NM_001036475.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
serine/threonine kinase/ protein-tyrosine kinase
AT2G47060 transcript variant AT2G47060.3 mRNA, complete
cds
Length = 1385
Score = 54.0 bits (27), Expect = 1e-004
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 702 gacaactccaaagctgtaaacatcactcttg 732
|||||||||||||||||| ||||||||||||
Sbjct: 882 gacaactccaaagctgtagacatcactcttg 852
>ref|NM_001036476.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
serine/threonine kinase/ protein-tyrosine kinase
AT2G47060 transcript variant AT2G47060.4 mRNA, complete
cds
Length = 1500
Score = 54.0 bits (27), Expect = 1e-004
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 702 gacaactccaaagctgtaaacatcactcttg 732
|||||||||||||||||| ||||||||||||
Sbjct: 901 gacaactccaaagctgtagacatcactcttg 871
>ref|NM_180136.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
serine/threonine kinase/ protein-tyrosine kinase
AT2G47060 transcript variant AT2G47060.2 mRNA, complete
cds
Length = 1377
Score = 54.0 bits (27), Expect = 1e-004
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 702 gacaactccaaagctgtaaacatcactcttg 732
|||||||||||||||||| ||||||||||||
Sbjct: 874 gacaactccaaagctgtagacatcactcttg 844
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 54.0 bits (27), Expect = 1e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 702 gacaactccaaagctgtaaacatcactcttg 732
|||||||||||||||||| ||||||||||||
Sbjct: 19340668 gacaactccaaagctgtagacatcactcttg 19340698
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 703 acaactccaaagctgtaaacatcactctt 731
||||||||||| |||||||||||||||||
Sbjct: 17975053 acaactccaaaactgtaaacatcactctt 17975025
Score = 42.1 bits (21), Expect = 0.49
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1368 atcatcatcatcatcaaatga 1388
|||||||||||||||||||||
Sbjct: 14897374 atcatcatcatcatcaaatga 14897394
Score = 42.1 bits (21), Expect = 0.49
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 703 acaactccaaagctgtaaacatcactctt 731
|||| ||||||||| ||||||||||||||
Sbjct: 6178564 acaattccaaagctataaacatcactctt 6178592
>emb|BX655040.1| Arabidopsis thaliana T-DNA flanking sequence GK-586B09-021758,
genomic survey sequence
Length = 417
Score = 52.0 bits (26), Expect = 5e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 682 cctgtcaatagttcaagcatgacaactccaaagctgtaaacatcactctt 731
|||||||| || ||||||| || |||||||||||||| |||||||||||
Sbjct: 272 cctgtcaacagctcaagcaacaccactccaaagctgtacacatcactctt 321
>gb|Z34736.1|Z34736 ATTS3496 Strasbourg-A Arabidopsis thaliana cDNA clone FAI155 5',
mRNA sequence
Length = 329
Score = 52.0 bits (26), Expect = 5e-004
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 431 tcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggcc 490
||||||| || |||||||| | | |||||||||||||||||| || ||||| ||||| |
Sbjct: 171 tcatgttagctctctgcaccaatacaaccaatgcttgcaccacttcagacatgggtggtc 112
Query: 491 tgaattctggttcaggctggac 512
| || ||||| || ||||||||
Sbjct: 111 taaactctggctccggctggac 90
>dbj|AB023031.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2K18
Length = 41465
Score = 52.0 bits (26), Expect = 5e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 682 cctgtcaatagttcaagcatgacaactccaaagctgtaaacatcactctt 731
|||||||| || ||||||| || |||||||||||||| |||||||||||
Sbjct: 14559 cctgtcaacagctcaagcaacaccactccaaagctgtacacatcactctt 14510
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 52.0 bits (26), Expect = 5e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 682 cctgtcaatagttcaagcatgacaactccaaagctgtaaacatcactctt 731
|||||||| || ||||||| || |||||||||||||| |||||||||||
Sbjct: 12806577 cctgtcaacagctcaagcaacaccactccaaagctgtacacatcactctt 12806528
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 703 acaactccaaagctgtaaacatcact 728
||||||||||||||||| ||||||||
Sbjct: 6304 acaactccaaagctgtatacatcact 6329
Score = 42.1 bits (21), Expect = 0.49
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 705 aactccaaagctgtaaacatc 725
|||||||||||||||||||||
Sbjct: 14490543 aactccaaagctgtaaacatc 14490563
>dbj|AK221316.1| Arabidopsis thaliana mRNA for serine/threonine protein kinase-like,
complete cds, clone: RAFL25-10-E11
Length = 1593
Score = 52.0 bits (26), Expect = 5e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 682 cctgtcaatagttcaagcatgacaactccaaagctgtaaacatcactctt 731
|||||||| || ||||||| || |||||||||||||| |||||||||||
Sbjct: 851 cctgtcaacagctcaagcaacaccactccaaagctgtacacatcactctt 802
>ref|NM_122949.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
serine/threonine kinase/ protein-tyrosine kinase
AT5G35580 mRNA, complete cds
Length = 1374
Score = 52.0 bits (26), Expect = 5e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 682 cctgtcaatagttcaagcatgacaactccaaagctgtaaacatcactctt 731
|||||||| || ||||||| || |||||||||||||| |||||||||||
Sbjct: 872 cctgtcaacagctcaagcaacaccactccaaagctgtacacatcactctt 823
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,612,994
Number of Sequences: 1013581
Number of extensions: 1612994
Number of successful extensions: 159857
Number of sequences better than 0.5: 136
Number of HSP's better than 0.5 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 139793
Number of HSP's gapped (non-prelim): 19508
length of query: 2639
length of database: 908,940,872
effective HSP length: 21
effective length of query: 2618
effective length of database: 887,655,671
effective search space: 2323882546678
effective search space used: 2323882546678
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)