BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2647494.2.1
(730 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB256784.1|CB256784 61-E011172-027-005-I15-T7R MPIZ-ADIS... 172 5e-041
gb|CF651630.1|CF651630 09-L020359-066-002-A03-SP6P MPIZ-ADI... 172 5e-041
gb|AY085854.1| Arabidopsis thaliana clone 19071 mRNA, compl... 172 5e-041
emb|BX814028.1|CNS0AE9U Arabidopsis thaliana Full-length cD... 172 5e-041
ref|NM_106535.2| Arabidopsis thaliana ubiquitin conjugating... 172 5e-041
gb|DQ027048.1| Arabidopsis thaliana ubiquitinating enzyme (... 172 5e-041
gb|AY049261.1| Arabidopsis thaliana At1g78870/F9K20_8 mRNA,... 165 1e-038
gb|BT000544.1| Arabidopsis thaliana putative ubiquitin-conj... 165 1e-038
gb|AV825916.1|AV825916 AV825916 RAFL7 Arabidopsis thaliana ... 163 5e-038
gb|AV537417.1|AV537417 AV537417 Arabidopsis thaliana roots ... 161 2e-037
ref|NM_179571.2| Arabidopsis thaliana ubiquitin conjugating... 159 8e-037
gb|AV824615.1|AV824615 AV824615 RAFL6 Arabidopsis thaliana ... 149 8e-034
gb|CB259578.1|CB259578 38-E9538-013-002-L10-T7R MPIZ-ADIS-0... 149 8e-034
gb|CB254245.1|CB254245 75-E015332-019-005-F19-T7R MPIZ-ADIS... 149 8e-034
gb|AY052307.1| Arabidopsis thaliana At1g16890/F17F16.16 mRN... 149 8e-034
gb|AY061926.1| Arabidopsis thaliana At1g16890/F17F16.16 mRN... 149 8e-034
gb|AY086780.1| Arabidopsis thaliana clone 2763 mRNA, comple... 149 8e-034
ref|NM_101550.1| Arabidopsis thaliana ubiquitin conjugating... 149 8e-034
gb|DQ027049.1| Arabidopsis thaliana ubiquitinating enzyme (... 149 8e-034
ref|NM_001036221.1| Arabidopsis thaliana ubiquitin conjugat... 137 3e-030
gb|AV545137.1|AV545137 AV545137 Arabidopsis thaliana roots ... 131 2e-028
emb|BX814646.1|CNS0AC4W Arabidopsis thaliana Full-length cD... 131 2e-028
ref|NM_179347.1| Arabidopsis thaliana ubiquitin conjugating... 131 2e-028
gb|BP862006.1|BP862006 BP862006 RAFL21 Arabidopsis thaliana... 127 3e-027
gb|Z34711.1|Z34711 ATTS3471 Strasbourg-A Arabidopsis thalia... 125 1e-026
gb|AI993889.1|AI993889 701515319 A. thaliana, Ohio State cl... 125 1e-026
gb|T22122.1|T22122 4130 Lambda-PRL2 Arabidopsis thaliana cD... 123 5e-026
gb|AA040983.1|AA040983 24249 CD4-13 Arabidopsis thaliana cD... 121 2e-025
emb|BX813701.1|CNS0AEIF Arabidopsis thaliana Full-length cD... 121 2e-025
gb|BP836421.1|BP836421 BP836421 RAFL19 Arabidopsis thaliana... 119 7e-025
gb|BE523894.1|BE523894 M43C2STM Arabidopsis developing seed... 117 3e-024
gb|T43710.1|T43710 6973 Lambda-PRL2 Arabidopsis thaliana cD... 115 1e-023
gb|BP819994.1|BP819994 BP819994 RAFL19 Arabidopsis thaliana... 105 1e-020
gb|BP851319.1|BP851319 BP851319 RAFL21 Arabidopsis thaliana... 105 1e-020
gb|H37659.1|H37659 15788 Lambda-PRL2 Arabidopsis thaliana c... 100 7e-019
gb|AV794908.1|AV794908 AV794908 RAFL8 Arabidopsis thaliana ... 100 7e-019
gb|T46680.1|T46680 9943 Lambda-PRL2 Arabidopsis thaliana cD... 98 3e-018
gb|BP837747.1|BP837747 BP837747 RAFL19 Arabidopsis thaliana... 96 1e-017
gb|BP854585.1|BP854585 BP854585 RAFL21 Arabidopsis thaliana... 96 1e-017
gb|BP857352.1|BP857352 BP857352 RAFL21 Arabidopsis thaliana... 90 6e-016
gb|BP565033.1|BP565033 BP565033 RAFL14 Arabidopsis thaliana... 86 1e-014
gb|AV553815.1|AV553815 AV553815 Arabidopsis thaliana roots ... 82 2e-013
gb|BP621472.1|BP621472 BP621472 RAFL16 Arabidopsis thaliana... 78 2e-012
emb|BX813418.1|CNS0ACA7 Arabidopsis thaliana Full-length cD... 78 2e-012
gb|AA712478.1|AA712478 32193 Lambda-PRL2 Arabidopsis thalia... 74 4e-011
gb|AV792906.1|AV792906 AV792906 RAFL7 Arabidopsis thaliana ... 74 4e-011
gb|H36151.1|H36151 14673 Lambda-PRL2 Arabidopsis thaliana c... 72 1e-010
gb|AV820658.1|AV820658 AV820658 RAFL11 Arabidopsis thaliana... 72 1e-010
gb|BP822506.1|BP822506 BP822506 RAFL19 Arabidopsis thaliana... 72 1e-010
gb|AV809348.1|AV809348 AV809348 RAFL9 Arabidopsis thaliana ... 68 2e-009
gb|AV819577.1|AV819577 AV819577 RAFL11 Arabidopsis thaliana... 68 2e-009
gb|BP666336.1|BP666336 BP666336 RAFL21 Arabidopsis thaliana... 68 2e-009
gb|AV790640.1|AV790640 AV790640 RAFL6 Arabidopsis thaliana ... 66 9e-009
gb|BP669230.1|BP669230 BP669230 RAFL21 Arabidopsis thaliana... 66 9e-009
gb|BP861202.1|BP861202 BP861202 RAFL21 Arabidopsis thaliana... 66 9e-009
gb|CB264254.1|CB264254 77-E014659-035-002-I20-T7R MPIZ-ADIS... 62 1e-007
gb|BP608679.1|BP608679 BP608679 RAFL16 Arabidopsis thaliana... 60 6e-007
gb|BP640016.1|BP640016 BP640016 RAFL19 Arabidopsis thaliana... 58 2e-006
gb|BP829877.1|BP829877 BP829877 RAFL19 Arabidopsis thaliana... 58 2e-006
gb|CW799164.1|CW799164 WiscDsLox323H12 Arabidopsis thaliana... 56 9e-006
gb|CW800248.1|CW800248 WiscDsLox233237_16L Arabidopsis thal... 56 9e-006
gb|T88233.1|T88233 11929 Lambda-PRL2 Arabidopsis thaliana c... 56 9e-006
gb|T45804.1|T45804 9067 Lambda-PRL2 Arabidopsis thaliana cD... 56 9e-006
gb|BE038605.1|BE038605 AB01G07 AB Arabidopsis thaliana cDNA... 56 9e-006
gb|AV537053.1|AV537053 AV537053 Arabidopsis thaliana liquid... 56 9e-006
gb|AV558510.1|AV558510 AV558510 Arabidopsis thaliana green ... 56 9e-006
gb|AC005679.1|F9K20 Arabidopsis thaliana chromosome 1 BAC F... 56 9e-006
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 56 9e-006
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 56 9e-006
gb|AA597426.1|AA597426 29697 Lambda-PRL2 Arabidopsis thalia... 54 3e-005
gb|AV786972.1|AV786972 AV786972 RAFL6 Arabidopsis thaliana ... 54 3e-005
gb|CD529244.1|CD529244 02D19 Arabidopsis Leaf Senescence Li... 54 3e-005
gb|BP625389.1|BP625389 BP625389 RAFL17 Arabidopsis thaliana... 48 0.002
gb|BP647557.1|BP647557 BP647557 RAFL19 Arabidopsis thaliana... 48 0.002
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 44 0.033
gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BA... 44 0.033
gb|AC051629.3|AC051629 Arabidopsis thaliana chromosome I BA... 44 0.033
emb|AJ598816.1| Arabidopsis thaliana T-DNA flanking sequenc... 42 0.13
gb|AU226961.1|AU226961 AU226961 RAFL14 Arabidopsis thaliana... 42 0.13
gb|AV824972.1|AV824972 AV824972 RAFL6 Arabidopsis thaliana ... 42 0.13
gb|AU236143.1|AU236143 AU236143 RAFL14 Arabidopsis thaliana... 42 0.13
gb|CB256291.1|CB256291 85-E012742-027-007-I22-T7R MPIZ-ADIS... 42 0.13
gb|CB257218.1|CB257218 39-E011173-027-005-M10-T7R MPIZ-ADIS... 42 0.13
gb|CF652773.1|CF652773 75-L020579-066-004-F19-SP6P MPIZ-ADI... 42 0.13
gb|BP569281.1|BP569281 BP569281 RAFL14 Arabidopsis thaliana... 42 0.13
gb|BP594861.1|BP594861 BP594861 RAFL15 Arabidopsis thaliana... 42 0.13
gb|BP597446.1|BP597446 BP597446 RAFL15 Arabidopsis thaliana... 42 0.13
gb|BP602827.1|BP602827 BP602827 RAFL16 Arabidopsis thaliana... 42 0.13
gb|BP640798.1|BP640798 BP640798 RAFL19 Arabidopsis thaliana... 42 0.13
gb|L00641.1|ATHUBCD Arabidopsis thaliana ubiquitin conjugat... 42 0.13
gb|AY063869.1| Arabidopsis thaliana putative E2, ubiquitin-... 42 0.13
gb|AY091223.1| Arabidopsis thaliana putative ubiquitin conj... 42 0.13
emb|AX506312.1| Sequence 1007 from Patent WO0216655 42 0.13
gb|AY086109.1| Arabidopsis thaliana clone 21455 mRNA, compl... 42 0.13
gb|AC012562.5|AC012562 Arabidopsis thaliana chromosome 3 BA... 42 0.13
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 42 0.13
emb|Z14992.1|ATUBC11 A.thaliana UBC11 mRNA for ubiquitin co... 42 0.13
ref|NM_111703.2| Arabidopsis thaliana ubiquitin conjugating... 42 0.13
gb|DQ027025.1| Arabidopsis thaliana ubiquitinating enzyme (... 42 0.13
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 42 0.13
>gb|CB256784.1|CB256784 61-E011172-027-005-I15-T7R MPIZ-ADIS-027 Arabidopsis thaliana cDNA
clone MPIZp772I155Q 5-PRIME, mRNA sequence
Length = 615
Score = 172 bits (87), Expect = 5e-041
Identities = 318/395 (80%)
Strand = Plus / Minus
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
|||||||| || |||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 524 ttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcactcagaaga 465
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| ||||| || | || ||||| ||||| || || || || |||||||||||||| |||
Sbjct: 464 gcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtccttgaga 405
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
|| || || || || || |||||||||||||| ||||||||||| || |||||||||||
Sbjct: 404 atatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgtgagaaac 345
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
||||| || || || ||||| || ||||| |||||||| || || || | ||||||||||
Sbjct: 344 ctaaccttgggagctgccatagggtattcttcaggcaaaaagagctccaacttgaaaact 285
Query: 532 ccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattc 591
|| |||||||| ||||| || | || ||||| ||||| || ||||| |||||||||||
Sbjct: 284 cctccttcataaggtgattgtgtaggaccaagaatcataacgttgaaataccgcatatta 225
Query: 592 tcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctcc 651
||||| || || || || || || || || || ||||| ||||| || || || || |||
Sbjct: 224 tcctcagatggagaggcacttataccgggagccggttcactgagcagacgttgagtttcc 165
Query: 652 ttgatgattcggcgcgggagattgctgttggccat 686
|||||||||| ||||| | ||| |||||||||||
Sbjct: 164 ttgatgattcttcgcggcaaattactgttggccat 130
>gb|CF651630.1|CF651630 09-L020359-066-002-A03-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001A032Q 5-PRIME, mRNA sequence
Length = 789
Score = 172 bits (87), Expect = 5e-041
Identities = 318/395 (80%)
Strand = Plus / Minus
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
|||||||| || |||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 517 ttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcactcagaaga 458
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| ||||| || | || ||||| ||||| || || || || |||||||||||||| |||
Sbjct: 457 gcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtccttgaga 398
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
|| || || || || || |||||||||||||| ||||||||||| || |||||||||||
Sbjct: 397 atatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgtgagaaac 338
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
||||| || || || ||||| || ||||| |||||||| || || || | ||||||||||
Sbjct: 337 ctaaccttgggagctgccatagggtattcttcaggcaaaaagagctccaacttgaaaact 278
Query: 532 ccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattc 591
|| |||||||| ||||| || | || ||||| ||||| || ||||| |||||||||||
Sbjct: 277 cctccttcataaggtgattgtgtaggaccaagaatcataacgttgaaataccgcatatta 218
Query: 592 tcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctcc 651
||||| || || || || || || || || || ||||| ||||| || || || || |||
Sbjct: 217 tcctcagatggagaggcacttataccgggagccggttcactgagcagacgttgagtttcc 158
Query: 652 ttgatgattcggcgcgggagattgctgttggccat 686
|||||||||| ||||| | ||| |||||||||||
Sbjct: 157 ttgatgattcttcgcggcaaattactgttggccat 123
>gb|AY085854.1| Arabidopsis thaliana clone 19071 mRNA, complete sequence
Length = 778
Score = 172 bits (87), Expect = 5e-041
Identities = 318/395 (80%)
Strand = Plus / Minus
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
|||||||| || |||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 528 ttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcactcagaaga 469
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| ||||| || | || ||||| ||||| || || || || |||||||||||||| |||
Sbjct: 468 gcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtccttgaga 409
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
|| || || || || || |||||||||||||| ||||||||||| || |||||||||||
Sbjct: 408 atatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgtgagaaac 349
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
||||| || || || ||||| || ||||| |||||||| || || || | ||||||||||
Sbjct: 348 ctaaccttgggagctgccatagggtattcttcaggcaaaaagagctccaacttgaaaact 289
Query: 532 ccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattc 591
|| |||||||| ||||| || | || ||||| ||||| || ||||| |||||||||||
Sbjct: 288 cctccttcataaggtgattgtgtaggaccaagaatcataacgttgaaataccgcatatta 229
Query: 592 tcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctcc 651
||||| || || || || || || || || || ||||| ||||| || || || || |||
Sbjct: 228 tcctcagatggagaggcacttataccgggagccggttcactgagcagacgttgagtttcc 169
Query: 652 ttgatgattcggcgcgggagattgctgttggccat 686
|||||||||| ||||| | ||| |||||||||||
Sbjct: 168 ttgatgattcttcgcggcaaattactgttggccat 134
>emb|BX814028.1|CNS0AE9U Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB52ZH04 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 803
Score = 172 bits (87), Expect = 5e-041
Identities = 318/395 (80%)
Strand = Plus / Minus
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
|||||||| || |||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 513 ttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcactcagaaga 454
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| ||||| || | |||||||| ||||| || || || || |||||||||||||| |||
Sbjct: 453 gcttgaatacttaagagaactgttcgtatttgtagtgcagggctccatttgtccttgaga 394
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
|| || || || || || |||||||||||||| ||||||||||| || |||||||||||
Sbjct: 393 atatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgtgagaaac 334
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
||||| || || || ||||| || ||||| |||||||| || || || | ||||||||||
Sbjct: 333 ctaaccttgggcgctgccatagggtattcttcaggcaaaaagagctccaacttgaaaact 274
Query: 532 ccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattc 591
|| |||||||| ||||| || | || ||||| ||||| || ||||| |||||||||||
Sbjct: 273 cctccttcataaggtgattgtgtaggaccaagaatcataacgttgaaataccgcatatta 214
Query: 592 tcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctcc 651
||||| || || || || || || || || || |||| ||||| || || || || |||
Sbjct: 213 tcctcagatggagaggcacttataccgggagccggttaactgagcagacgttgagtttcc 154
Query: 652 ttgatgattcggcgcgggagattgctgttggccat 686
|||||||||| ||||| | ||| |||||||||||
Sbjct: 153 ttgatgattcttcgcggcaaattactgttggccat 119
>ref|NM_106535.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
activating enzyme AT1G78870 transcript variant
AT1G78870.2 mRNA, complete cds
Length = 909
Score = 172 bits (87), Expect = 5e-041
Identities = 318/395 (80%)
Strand = Plus / Minus
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
|||||||| || |||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 528 ttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcactcagaaga 469
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| ||||| || | || ||||| ||||| || || || || |||||||||||||| |||
Sbjct: 468 gcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtccttgaga 409
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
|| || || || || || |||||||||||||| ||||||||||| || |||||||||||
Sbjct: 408 atatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgtgagaaac 349
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
||||| || || || ||||| || ||||| |||||||| || || || | ||||||||||
Sbjct: 348 ctaaccttgggagctgccatagggtattcttcaggcaaaaagagctccaacttgaaaact 289
Query: 532 ccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattc 591
|| |||||||| ||||| || | || ||||| ||||| || ||||| |||||||||||
Sbjct: 288 cctccttcataaggtgattgtgtaggaccaagaatcataacgttgaaataccgcatatta 229
Query: 592 tcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctcc 651
||||| || || || || || || || || || ||||| ||||| || || || || |||
Sbjct: 228 tcctcagatggagaggcacttataccgggagccggttcactgagcagacgttgagtttcc 169
Query: 652 ttgatgattcggcgcgggagattgctgttggccat 686
|||||||||| ||||| | ||| |||||||||||
Sbjct: 168 ttgatgattcttcgcggcaaattactgttggccat 134
>gb|DQ027048.1| Arabidopsis thaliana ubiquitinating enzyme (At1g78870) mRNA,
complete cds
Length = 462
Score = 172 bits (87), Expect = 5e-041
Identities = 318/395 (80%)
Strand = Plus / Minus
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
|||||||| || |||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 395 ttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcactcagaaga 336
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| ||||| || | || ||||| ||||| || || || || |||||||||||||| |||
Sbjct: 335 gcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtccttgaga 276
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
|| || || || || || |||||||||||||| ||||||||||| || |||||||||||
Sbjct: 275 atatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgtgagaaac 216
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
||||| || || || ||||| || ||||| |||||||| || || || | ||||||||||
Sbjct: 215 ctaaccttgggagctgccatagggtattcttcaggcaaaaagagctccaacttgaaaact 156
Query: 532 ccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattc 591
|| |||||||| ||||| || | || ||||| ||||| || ||||| |||||||||||
Sbjct: 155 cctccttcataaggtgattgtgtaggaccaagaatcataacgttgaaataccgcatatta 96
Query: 592 tcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctcc 651
||||| || || || || || || || || || ||||| ||||| || || || || |||
Sbjct: 95 tcctcagatggagaggcacttataccgggagccggttcactgagcagacgttgagtttcc 36
Query: 652 ttgatgattcggcgcgggagattgctgttggccat 686
|||||||||| ||||| | ||| |||||||||||
Sbjct: 35 ttgatgattcttcgcggcaaattactgttggccat 1
>gb|AY049261.1| Arabidopsis thaliana At1g78870/F9K20_8 mRNA, complete cds
Length = 757
Score = 165 bits (83), Expect = 1e-038
Identities = 317/395 (80%)
Strand = Plus / Minus
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
|||||||| || |||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 505 ttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcactcagaaga 446
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| ||||| || | || ||||| ||||| || || || || |||||||||||||| |||
Sbjct: 445 gcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtccttgaga 386
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
|| || || || || || |||||||||||||| ||||||||||| || |||||||||||
Sbjct: 385 atatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgtgagaaac 326
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
||||| || || || ||||| || ||||| |||||||| || || || | ||||||||||
Sbjct: 325 ctaaccttgggagctgccatagggtattcttcaggcaaaaagagctccaacttgaaaact 266
Query: 532 ccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattc 591
|| |||||||| ||||| || | || ||||| ||||| || ||||| |||||||||||
Sbjct: 265 cctccttcataaggtgattgtgtaggaccaagaatcataacgttgaaataccgcatatta 206
Query: 592 tcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctcc 651
||||| || || || || || || || || || ||||| ||||| || || || || |||
Sbjct: 205 tcctcagatggagaggcacttataccgggagccggttcactgagcagacgttgagtttcc 146
Query: 652 ttgatgattcggcgcgggagattgctgttggccat 686
|||||||||| || || | ||| |||||||||||
Sbjct: 145 ttgatgattcttcgtggcaaattactgttggccat 111
>gb|BT000544.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme E2
(At1g78870/F9K20_8) mRNA, complete cds
Length = 462
Score = 165 bits (83), Expect = 1e-038
Identities = 317/395 (80%)
Strand = Plus / Minus
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
|||||||| || |||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 395 ttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcactcagaaga 336
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| ||||| || | || ||||| ||||| || || || || |||||||||||||| |||
Sbjct: 335 gcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtccttgaga 276
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
|| || || || || || |||||||||||||| ||||||||||| || |||||||||||
Sbjct: 275 atatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgtgagaaac 216
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
||||| || || || ||||| || ||||| |||||||| || || || | ||||||||||
Sbjct: 215 ctaaccttgggagctgccatagggtattcttcaggcaaaaagagctccaacttgaaaact 156
Query: 532 ccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattc 591
|| |||||||| ||||| || | || ||||| ||||| || ||||| |||||||||||
Sbjct: 155 cctccttcataaggtgattgtgtaggaccaagaatcataacgttgaaataccgcatatta 96
Query: 592 tcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctcc 651
||||| || || || || || || || || || ||||| ||||| || || || || |||
Sbjct: 95 tcctcagatggagaggcacttataccgggagccggttcactgagcagacgttgagtttcc 36
Query: 652 ttgatgattcggcgcgggagattgctgttggccat 686
|||||||||| || || | ||| |||||||||||
Sbjct: 35 ttgatgattcttcgtggcaaattactgttggccat 1
>gb|AV825916.1|AV825916 AV825916 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-17-D23 5',
mRNA sequence
Length = 607
Score = 163 bits (82), Expect = 5e-038
Identities = 307/382 (80%)
Strand = Plus / Minus
Query: 305 caatgttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctca 364
||||||| || || || ||||||||||||||||| || |||||||| || ||||| || |
Sbjct: 493 caatgttctcagaaagcggatcatctgggtttggtgcactcagaagagcttgaatactta 434
Query: 365 gtagaactgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcata 424
|| ||||| ||||| || || || || |||||||||||||| ||||| || || || |
Sbjct: 433 agagcactgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacaga 374
Query: 425 tcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttgggg 484
| || |||||||||||||| ||||||||||| || ||||||||||| ||||| || || |
Sbjct: 373 ttcttccaagcttgtcaatgttaggatggtatatctttgtgagaaacctaaccttgggag 314
Query: 485 cagccattggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagg 544
| ||||| || ||||| |||||||| || || || | |||||||||||| |||||||| |
Sbjct: 313 ctgccatagggtattcttcaggcaaaaagagctccaacttgaaaactcctccttcataag 254
Query: 545 gtgactgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcg 604
|||| || | || ||||| ||||| || ||||| ||||||||||| ||||| || || |
Sbjct: 253 gtgattgtgtaggaccaagaatcataacgttgaaataccgcatattatcctcagatggag 194
Query: 605 acgcgctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggc 664
| || || || || || || ||||| ||||| || || || || ||||||||||||| |
Sbjct: 193 aggcacttataccgggagccggttcactgagcagacgttgagtttccttgatgattcttc 134
Query: 665 gcgggagattgctgttggccat 686
|||| | ||| |||||||||||
Sbjct: 133 gcggcaaattactgttggccat 112
>gb|AV537417.1|AV537417 AV537417 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ05f06F 3', mRNA sequence
Length = 596
Score = 161 bits (81), Expect = 2e-037
Identities = 249/305 (81%)
Strand = Plus / Plus
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
|||||||| || |||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 238 ttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcactcagaaga 297
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| ||||| || | || ||||| ||||| || || || || |||||||||||||| |||
Sbjct: 298 gcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtccttgaga 357
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
|| || || || || || |||||||||||||| ||||||||||| || |||||||||||
Sbjct: 358 atatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgtgagaaac 417
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
||||| || || || ||||| || ||||| |||||||| || || || | ||||||||||
Sbjct: 418 ctaaccttgggagctgccatagggtattcttcaggcaaaaagagctccaacttgaaaact 477
Query: 532 ccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattc 591
|| |||||||| ||||| || | || ||||| ||||| || ||||| |||||||||||
Sbjct: 478 cctccttcataaggtgattgtgtaggaccaagaatcataacgttgaaataccgcatatta 537
Query: 592 tcctc 596
|||||
Sbjct: 538 tcctc 542
>ref|NM_179571.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
activating enzyme AT1G78870 transcript variant
AT1G78870.1 mRNA, complete cds
Length = 905
Score = 159 bits (80), Expect = 8e-037
Identities = 319/398 (80%), Gaps = 3/398 (0%)
Strand = Plus / Minus
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
|||||||| || |||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 524 ttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcactcagaaga 465
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| ||||| || | || ||||| ||||| || || || || |||||||||||||| |||
Sbjct: 464 gcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtccttgaga 405
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
|| || || || || || |||||||||||||| ||||||||||| || |||||||||||
Sbjct: 404 atatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgtgagaaac 345
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
||||| || || || ||||| || ||||| |||||||| || || || | ||||||||||
Sbjct: 344 ctaaccttgggagctgccatagggtattcttcaggcaaaaagagctccaacttgaaaact 285
Query: 532 cc---accttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcata 588
|| ||||||||| ||||| || | || ||||| ||||| || ||||| |||||||||
Sbjct: 284 cctctaccttcataaggtgattgtgtaggaccaagaatcataacgttgaaataccgcata 225
Query: 589 ttctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtc 648
|| ||||| || || || || || || || || || ||||| ||||| || || || ||
Sbjct: 224 ttatcctcagatggagaggcacttataccgggagccggttcactgagcagacgttgagtt 165
Query: 649 tccttgatgattcggcgcgggagattgctgttggccat 686
||||||||||||| ||||| | ||| |||||||||||
Sbjct: 164 tccttgatgattcttcgcggcaaattactgttggccat 127
>gb|AV824615.1|AV824615 AV824615 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-73-J10 5',
mRNA sequence
Length = 659
Score = 149 bits (75), Expect = 8e-034
Identities = 360/455 (79%)
Strand = Plus / Minus
Query: 232 ccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagcttcgttggat 291
||||||| ||| || |||||||| ||||| ||||| || |||||||| || || |||
Sbjct: 554 ccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattgctc 495
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
||||| || || || ||||| || || |||||||||||||||||||| || || | |||
Sbjct: 494 ttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaaaga 435
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| || || |||| || || || ||||| || || || |||||||| ||||| || ||
Sbjct: 434 gcttggatactcaagagcacagttcgtatttgtagtgcaggactccacttgtctttcagt 375
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
||||| ||||| || || ||||||||||| || |||||||||||||| || ||||||||
Sbjct: 374 atgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgagaaac 315
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
||||| || || || ||||| |||||||| |||||||| || || || | ||||||||||
Sbjct: 314 ctaaccttgggagctgccataggatattcttcaggcaaaaagagctccaacttgaaaact 255
Query: 532 ccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattc 591
|| |||||||| || || || | || ||||| ||||| |||||||| || | ||||||
Sbjct: 254 cctccttcataaggagattgagtaggaccaagaatcataacattgaaatatctcatattt 195
Query: 592 tcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctcc 651
||||| || || ||||| || ||||| || || ||||| || || || || || || |||
Sbjct: 194 tcctctgatggagacgcacttatcccaggagcaggttcactaagcagacgttgagtttcc 135
Query: 652 ttgatgattcggcgcgggagattgctgttggccat 686
||||||||||| || || ||||| || ||||||||
Sbjct: 134 ttgatgattcgtcggggaagattactattggccat 100
>gb|CB259578.1|CB259578 38-E9538-013-002-L10-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770L102Q 5-PRIME, mRNA sequence
Length = 603
Score = 149 bits (75), Expect = 8e-034
Identities = 246/303 (81%)
Strand = Plus / Minus
Query: 294 ccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagtgc 353
|||||| || |||||||| || || || ||||||||||||||||| || |||||||| ||
Sbjct: 533 ccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcactcagaagagc 474
Query: 354 ctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaagaat 413
||||| || | || ||||| ||||| || || || || |||||||||||||| |||||
Sbjct: 473 ttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtccttgagaat 414
Query: 414 gtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaatct 473
|| || || || || |||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 413 atcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgtgagaaacct 354
Query: 474 aacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaactcc 533
||| || || || ||||| || ||||| |||||||| || || || | ||||||||||||
Sbjct: 353 aaccttgggagctgccatagggtattcttcaggcaaaaagagctccaacttgaaaactcc 294
Query: 534 accttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattctc 593
|||||||| ||||| || | || ||||| ||||| | ||||| ||||||||||| ||
Sbjct: 293 tccttcataaggtgattgtgtaggaccaagaatcatagcgttgaaataccgcatattatc 234
Query: 594 ctc 596
|||
Sbjct: 233 ctc 231
>gb|CB254245.1|CB254245 75-E015332-019-005-F19-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768F195Q 5-PRIME, mRNA sequence
Length = 709
Score = 149 bits (75), Expect = 8e-034
Identities = 360/455 (79%)
Strand = Plus / Minus
Query: 232 ccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagcttcgttggat 291
||||||| ||| || |||||||| ||||| ||||| || |||||||| || || |||
Sbjct: 538 ccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattgctc 479
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
||||| || || || ||||| || || |||||||||||||||||||| || || | |||
Sbjct: 478 ttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaaaga 419
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| || || |||| || || || ||||| || || || |||||||| ||||| || ||
Sbjct: 418 gcttggatactcaagagcacagttcgtatttgtagtgcaggactccacttgtctttcagt 359
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
||||| ||||| || || ||||||||||| || |||||||||||||| || ||||||||
Sbjct: 358 atgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgagaaac 299
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
||||| || || || ||||| |||||||| |||||||| || || || | ||||||||||
Sbjct: 298 ctaaccttgggagctgccataggatattcttcaggcaaaaagagctccaacttgaaaact 239
Query: 532 ccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattc 591
|| |||||||| || || || | || ||||| ||||| |||||||| || | ||||||
Sbjct: 238 cctccttcataaggagattgagtaggaccaagaatcataacattgaaatatctcatattt 179
Query: 592 tcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctcc 651
||||| || || ||||| || ||||| || || ||||| || || || || || || |||
Sbjct: 178 tcctctgatggagacgcacttatcccaggagcaggttcactaagcagacgttgagtttcc 119
Query: 652 ttgatgattcggcgcgggagattgctgttggccat 686
||||||||||| || || ||||| || ||||||||
Sbjct: 118 ttgatgattcgtcggggaagattactattggccat 84
>gb|AY052307.1| Arabidopsis thaliana At1g16890/F17F16.16 mRNA, complete cds
Length = 751
Score = 149 bits (75), Expect = 8e-034
Identities = 360/455 (79%)
Strand = Plus / Minus
Query: 232 ccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagcttcgttggat 291
||||||| ||| || |||||||| ||||| ||||| || |||||||| || || |||
Sbjct: 553 ccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattgctc 494
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
||||| || || || ||||| || || |||||||||||||||||||| || || | |||
Sbjct: 493 ttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaaaga 434
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| || || |||| || || || ||||| || || || |||||||| ||||| || ||
Sbjct: 433 gcttggatactcaagagcacagttcgtatttgtagtgcaggactccacttgtctttcagt 374
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
||||| ||||| || || ||||||||||| || |||||||||||||| || ||||||||
Sbjct: 373 atgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgagaaac 314
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
||||| || || || ||||| |||||||| |||||||| || || || | ||||||||||
Sbjct: 313 ctaaccttgggagctgccataggatattcttcaggcaaaaagagctccaacttgaaaact 254
Query: 532 ccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattc 591
|| |||||||| || || || | || ||||| ||||| |||||||| || | ||||||
Sbjct: 253 cctccttcataaggagattgagtaggaccaagaatcataacattgaaatatctcatattt 194
Query: 592 tcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctcc 651
||||| || || ||||| || ||||| || || ||||| || || || || || || |||
Sbjct: 193 tcctctgatggagacgcacttatcccaggagcaggttcactaagcagacgttgagtttcc 134
Query: 652 ttgatgattcggcgcgggagattgctgttggccat 686
||||||||||| || || ||||| || ||||||||
Sbjct: 133 ttgatgattcgtcggggaagattactattggccat 99
>gb|AY061926.1| Arabidopsis thaliana At1g16890/F17F16.16 mRNA, complete cds
Length = 462
Score = 149 bits (75), Expect = 8e-034
Identities = 360/455 (79%)
Strand = Plus / Minus
Query: 232 ccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagcttcgttggat 291
||||||| ||| || |||||||| ||||| ||||| || |||||||| || || |||
Sbjct: 455 ccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattgctc 396
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
||||| || || || ||||| || || |||||||||||||||||||| || || | |||
Sbjct: 395 ttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaaaga 336
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| || || |||| || || || ||||| || || || |||||||| ||||| || ||
Sbjct: 335 gcttggatactcaagagcacagttcgtatttgtagtgcaggactccacttgtctttcagt 276
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
||||| ||||| || || ||||||||||| || |||||||||||||| || ||||||||
Sbjct: 275 atgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgagaaac 216
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
||||| || || || ||||| |||||||| |||||||| || || || | ||||||||||
Sbjct: 215 ctaaccttgggagctgccataggatattcttcaggcaaaaagagctccaacttgaaaact 156
Query: 532 ccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattc 591
|| |||||||| || || || | || ||||| ||||| |||||||| || | ||||||
Sbjct: 155 cctccttcataaggagattgagtaggaccaagaatcataacattgaaatatctcatattt 96
Query: 592 tcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctcc 651
||||| || || ||||| || ||||| || || ||||| || || || || || || |||
Sbjct: 95 tcctctgatggagacgcacttatcccaggagcaggttcactaagcagacgttgagtttcc 36
Query: 652 ttgatgattcggcgcgggagattgctgttggccat 686
||||||||||| || || ||||| || ||||||||
Sbjct: 35 ttgatgattcgtcggggaagattactattggccat 1
>gb|AY086780.1| Arabidopsis thaliana clone 2763 mRNA, complete sequence
Length = 795
Score = 149 bits (75), Expect = 8e-034
Identities = 360/455 (79%)
Strand = Plus / Minus
Query: 232 ccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagcttcgttggat 291
||||||| ||| || |||||||| ||||| ||||| || |||||||| || || |||
Sbjct: 584 ccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattgctc 525
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
||||| || || || ||||| || || |||||||||||||||||||| || || | |||
Sbjct: 524 ttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaaaga 465
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| || || |||| || || || ||||| || || || |||||||| ||||| || ||
Sbjct: 464 gcttggatactcaagagcacagttcgtatttgtagtgcaggactccacttgtctttcagt 405
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
||||| ||||| || || ||||||||||| || |||||||||||||| || ||||||||
Sbjct: 404 atgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgagaaac 345
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
||||| || || || ||||| |||||||| |||||||| || || || | ||||||||||
Sbjct: 344 ctaaccttgggagctgccataggatattcttcaggcaaaaagagctccaacttgaaaact 285
Query: 532 ccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattc 591
|| |||||||| || || || | || ||||| ||||| |||||||| || | ||||||
Sbjct: 284 cctccttcataaggagattgagtaggaccaagaatcataacattgaaatatctcatattt 225
Query: 592 tcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctcc 651
||||| || || ||||| || ||||| || || ||||| || || || || || || |||
Sbjct: 224 tcctctgatggagacgcacttatcccaggagcaggttcactaagcagacgttgagtttcc 165
Query: 652 ttgatgattcggcgcgggagattgctgttggccat 686
||||||||||| || || ||||| || ||||||||
Sbjct: 164 ttgatgattcgtcggggaagattactattggccat 130
>ref|NM_101550.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
activating enzyme AT1G16890 transcript variant
AT1G16890.2 mRNA, complete cds
Length = 794
Score = 149 bits (75), Expect = 8e-034
Identities = 360/455 (79%)
Strand = Plus / Minus
Query: 232 ccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagcttcgttggat 291
||||||| ||| || |||||||| ||||| ||||| || |||||||| || || |||
Sbjct: 583 ccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattgctc 524
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
||||| || || || ||||| || || |||||||||||||||||||| || || | |||
Sbjct: 523 ttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaaaga 464
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| || || |||| || || || ||||| || || || |||||||| ||||| || ||
Sbjct: 463 gcttggatactcaagagcacagttcgtatttgtagtgcaggactccacttgtctttcagt 404
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
||||| ||||| || || ||||||||||| || |||||||||||||| || ||||||||
Sbjct: 403 atgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgagaaac 344
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
||||| || || || ||||| |||||||| |||||||| || || || | ||||||||||
Sbjct: 343 ctaaccttgggagctgccataggatattcttcaggcaaaaagagctccaacttgaaaact 284
Query: 532 ccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattc 591
|| |||||||| || || || | || ||||| ||||| |||||||| || | ||||||
Sbjct: 283 cctccttcataaggagattgagtaggaccaagaatcataacattgaaatatctcatattt 224
Query: 592 tcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctcc 651
||||| || || ||||| || ||||| || || ||||| || || || || || || |||
Sbjct: 223 tcctctgatggagacgcacttatcccaggagcaggttcactaagcagacgttgagtttcc 164
Query: 652 ttgatgattcggcgcgggagattgctgttggccat 686
||||||||||| || || ||||| || ||||||||
Sbjct: 163 ttgatgattcgtcggggaagattactattggccat 129
>gb|DQ027049.1| Arabidopsis thaliana ubiquitinating enzyme (At1g16890) mRNA,
complete cds
Length = 462
Score = 149 bits (75), Expect = 8e-034
Identities = 360/455 (79%)
Strand = Plus / Minus
Query: 232 ccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagcttcgttggat 291
||||||| ||| || |||||||| ||||| ||||| || |||||||| || || |||
Sbjct: 455 ccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattgctc 396
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
||||| || || || ||||| || || |||||||||||||||||||| || || | |||
Sbjct: 395 ttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaaaga 336
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| || || |||| || || || ||||| || || || |||||||| ||||| || ||
Sbjct: 335 gcttggatactcaagagcacagttcgtatttgtagtgcaggactccacttgtctttcagt 276
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
||||| ||||| || || ||||||||||| || |||||||||||||| || ||||||||
Sbjct: 275 atgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgagaaac 216
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
||||| || || || ||||| |||||||| |||||||| || || || | ||||||||||
Sbjct: 215 ctaaccttgggagctgccataggatattcttcaggcaaaaagagctccaacttgaaaact 156
Query: 532 ccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattc 591
|| |||||||| || || || | || ||||| ||||| |||||||| || | ||||||
Sbjct: 155 cctccttcataaggagattgagtaggaccaagaatcataacattgaaatatctcatattt 96
Query: 592 tcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctcc 651
||||| || || ||||| || ||||| || || ||||| || || || || || || |||
Sbjct: 95 tcctctgatggagacgcacttatcccaggagcaggttcactaagcagacgttgagtttcc 36
Query: 652 ttgatgattcggcgcgggagattgctgttggccat 686
||||||||||| || || ||||| || ||||||||
Sbjct: 35 ttgatgattcgtcggggaagattactattggccat 1
>ref|NM_001036221.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
activating enzyme AT1G78870 transcript variant
AT1G78870.3 mRNA, complete cds
Length = 1013
Score = 137 bits (69), Expect = 3e-030
Identities = 237/293 (80%)
Strand = Plus / Minus
Query: 394 ctccatttgtccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatgg 453
|||||||||||||| ||||| || || || || || |||||||||||||| |||||||||
Sbjct: 427 ctccatttgtccttgagaatatcaagacagattcttccaagcttgtcaatgttaggatgg 368
Query: 454 taaatttttgtgagaaatctaacttttggggcagccattggatattcctcaggcaagaat 513
|| || ||||||||||| ||||| || || || ||||| || ||||| |||||||| ||
Sbjct: 367 tatatctttgtgagaaacctaaccttgggagctgccatagggtattcttcaggcaaaaag 308
Query: 514 agttcaagcttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgaca 573
|| || | |||||||||||| |||||||| ||||| || | || ||||| ||||| ||
Sbjct: 307 agctccaacttgaaaactcctccttcataaggtgattgtgtaggaccaagaatcataacg 248
Query: 574 ttgaagtaccgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctg 633
||||| ||||||||||| ||||| || || || || || || || || || ||||| |||
Sbjct: 247 ttgaaataccgcatattatcctcagatggagaggcacttataccgggagccggttcactg 188
Query: 634 agaagccgctgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|| || || || || ||||||||||||| ||||| | ||| |||||||||||
Sbjct: 187 agcagacgttgagtttccttgatgattcttcgcggcaaattactgttggccat 135
Score = 56.0 bits (28), Expect = 9e-006
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
|||||||| || |||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 632 ttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcactcagaaga 573
Query: 352 gcctgaat 359
|| |||||
Sbjct: 572 gcttgaat 565
>gb|AV545137.1|AV545137 AV545137 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ73a08F 3', mRNA sequence
Length = 651
Score = 131 bits (66), Expect = 2e-028
Identities = 306/386 (79%)
Strand = Plus / Plus
Query: 232 ccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagcttcgttggat 291
||||||| ||| || |||||||| ||||| ||||| || |||||||| || || |||
Sbjct: 172 ccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattgctc 231
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
||||| || || || ||||| || || |||||||||||||||||||| || || | |||
Sbjct: 232 ttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaaaga 291
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| || || |||| || || || ||||| || || || |||||||| ||||| || ||
Sbjct: 292 gcttggatactcaagagcacagttcgtatttgtagtgcaggactccacttgtctttcagt 351
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
||||| ||||| || || ||||||||||| || |||||||||||||| || ||||||||
Sbjct: 352 atgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgagaaac 411
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
||||| || || || ||||| |||||||| |||||||| || || || | ||||||||||
Sbjct: 412 ctaaccttgggagctgccataggatattcttcaggcaaaaagagctccaacttgaaaact 471
Query: 532 ccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattc 591
|| |||||||| || || || | || ||||| ||||| |||||||| || | ||||||
Sbjct: 472 cctccttcataaggagattgagtaggaccaagaatcataacattgaaatatctcatattt 531
Query: 592 tcctccgacggcgacgcgctaatccc 617
||||| || || ||||| || |||||
Sbjct: 532 tcctctgatggagacgcacttatccc 557
>emb|BX814646.1|CNS0AC4W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB86ZH05 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 515
Score = 131 bits (66), Expect = 2e-028
Identities = 198/242 (81%)
Strand = Plus / Minus
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
|||||||| || |||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 246 ttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcactcagaaga 187
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| ||||| || | || ||||| ||||| || || || || |||||||||||||| |||
Sbjct: 186 gcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtccttgaga 127
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
|| || || || || || |||||||||||||| ||||||||||| || |||||||||||
Sbjct: 126 atatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgtgagaaac 67
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
||||| || || || ||||| || ||||| |||||||| || || || | ||||||||||
Sbjct: 66 ctaaccttgggagctgccatagggtattcttcaggcaaaaagagctccaacttgaaaact 7
Query: 532 cc 533
||
Sbjct: 6 cc 5
>ref|NM_179347.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
activating enzyme AT1G16890 transcript variant
AT1G16890.1 mRNA, complete cds
Length = 804
Score = 131 bits (66), Expect = 2e-028
Identities = 306/386 (79%)
Strand = Plus / Minus
Query: 232 ccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagcttcgttggat 291
||||||| ||| || |||||||| ||||| ||||| || |||||||| || || |||
Sbjct: 593 ccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattgctc 534
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
||||| || || || ||||| || || |||||||||||||||||||| || || | |||
Sbjct: 533 ttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaaaga 474
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| || || |||| || || || ||||| || || || |||||||| ||||| || ||
Sbjct: 473 gcttggatactcaagagcacagttcgtatttgtagtgcaggactccacttgtctttcagt 414
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
||||| ||||| || || ||||||||||| || |||||||||||||| || ||||||||
Sbjct: 413 atgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgagaaac 354
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
||||| || || || ||||| |||||||| |||||||| || || || | ||||||||||
Sbjct: 353 ctaaccttgggagctgccataggatattcttcaggcaaaaagagctccaacttgaaaact 294
Query: 532 ccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattc 591
|| |||||||| || || || | || ||||| ||||| |||||||| || | ||||||
Sbjct: 293 cctccttcataaggagattgagtaggaccaagaatcataacattgaaatatctcatattt 234
Query: 592 tcctccgacggcgacgcgctaatccc 617
||||| || || ||||| || |||||
Sbjct: 233 tcctctgatggagacgcacttatccc 208
>gb|BP862006.1|BP862006 BP862006 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-49-J15 5',
mRNA sequence
Length = 403
Score = 127 bits (64), Expect = 3e-027
Identities = 217/268 (80%)
Strand = Plus / Minus
Query: 394 ctccatttgtccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatgg 453
|||||||||||||| ||||| || || || || || |||||||||||||| |||||||||
Sbjct: 393 ctccatttgtccttgagaatatcaagacagattcttccaagcttgtcaatgttaggatgg 334
Query: 454 taaatttttgtgagaaatctaacttttggggcagccattggatattcctcaggcaagaat 513
|| || ||||||||||| ||||| || || || ||||| || ||||| |||||||| ||
Sbjct: 333 tatatctttgtgagaaacctaaccttgggagctgccatagggtattcttcaggcaaaaag 274
Query: 514 agttcaagcttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgaca 573
|| || | |||||||||||| |||||||| ||||| || | || ||||| ||||| ||
Sbjct: 273 agctccaacttgaaaactcctccttcataaggtgattgtgtaggaccaagaatcataacg 214
Query: 574 ttgaagtaccgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctg 633
||||| ||||||||||| ||||| || || || || || || || || || ||||| |||
Sbjct: 213 ttgaaataccgcatattatcctcagatggagaggcacttataccgggagccggttcactg 154
Query: 634 agaagccgctgcgtctccttgatgattc 661
|| || || || || |||||||||||||
Sbjct: 153 agcagacgttgagtttccttgatgattc 126
>gb|Z34711.1|Z34711 ATTS3471 Strasbourg-A Arabidopsis thaliana cDNA clone FAFJ92 3',
mRNA sequence
Length = 364
Score = 125 bits (63), Expect = 1e-026
Identities = 234/291 (80%)
Strand = Plus / Minus
Query: 396 ccatttgtccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggta 455
||||||| |||| ||||| || || || || || |||||||||||||| |||||||||||
Sbjct: 364 ccatttgcccttgagaatatcaagacagattcttccaagcttgtcaatgttaggatggta 305
Query: 456 aatttttgtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatag 515
|| ||||||||||| ||||| || || || ||||| || ||||| |||||||| || ||
Sbjct: 304 tatctttgtgagaaacctaaccttgggagctgccatagggtattcttcaggcaaaaagag 245
Query: 516 ttcaagcttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacatt 575
|| | |||||||||||| |||||||| ||||| || | || ||||| ||||| || ||
Sbjct: 244 ctccaacttgaaaactcctccttcataaggtgattgtgtaggaccaagaatcataacgtt 185
Query: 576 gaagtaccgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgag 635
||| ||||||||||| ||||| || || || || || || || || || ||||| |||||
Sbjct: 184 gaaataccgcatattatcctcagatggagaggcacttataccgggagccggttcactgag 125
Query: 636 aagccgctgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|| || || || ||||||||||||| ||||| | ||| |||||||||||
Sbjct: 124 cagacgttgagtttccttgatgattcttcgcggcaaattactgttggccat 74
>gb|AI993889.1|AI993889 701515319 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701515319, mRNA sequence
Length = 594
Score = 125 bits (63), Expect = 1e-026
Identities = 168/203 (82%)
Strand = Plus / Minus
Query: 394 ctccatttgtccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatgg 453
|||||||||||||| ||||| || || || || || |||||||||||||| |||||||||
Sbjct: 233 ctccatttgtccttgagaatatcaagacagattcttccaagcttgtcaatgttaggatgg 174
Query: 454 taaatttttgtgagaaatctaacttttggggcagccattggatattcctcaggcaagaat 513
|| || ||||||||||| ||||| || || || ||||| || ||||| |||||||| ||
Sbjct: 173 tatatctttgtgagaaacctaaccttgggagctgccatagggtattcttcaggcaaaaag 114
Query: 514 agttcaagcttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgaca 573
|| || | |||||||||||| |||||||| ||||| || | || ||||| ||||| ||
Sbjct: 113 agctccaacttgaaaactcctccttcataaggtgattgtgtaggaccaagaatcataacg 54
Query: 574 ttgaagtaccgcatattctcctc 596
||||| ||||||||||| |||||
Sbjct: 53 ttgaaataccgcatattatcctc 31
Score = 56.0 bits (28), Expect = 9e-006
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
|||||||| || |||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 438 ttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcactcagaaga 379
Query: 352 gcctgaat 359
|| |||||
Sbjct: 378 gcttgaat 371
>gb|T22122.1|T22122 4130 Lambda-PRL2 Arabidopsis thaliana cDNA clone 96P20T7, mRNA
sequence
Length = 524
Score = 123 bits (62), Expect = 5e-026
Identities = 181/221 (81%)
Strand = Plus / Minus
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| ||||| || || || || |||||||||||||| ||||| || || || || ||
Sbjct: 255 actgtncgtatttgtagtgcagggctccatttgtccttgagaatatcaagacagattctt 196
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|||||||||||||| ||||||||||| || ||||||||||| ||||| || || || |||
Sbjct: 195 ccaagcttgtcaatgttaggatggtatatctttgtgagaaacctaaccttgggagctgcc 136
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
|| || ||||| |||||||| || || || | |||||||||||| |||||||| |||||
Sbjct: 135 atagggtattcttcaggcaaaaagagctccaacttgaaaactcctccttcataaggtgat 76
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatatt 590
|| | || ||||| ||||| || ||||| |||||||||||
Sbjct: 75 tgtgtaggaccaagaatcataacgttgaaataccgcatatt 35
>gb|AA040983.1|AA040983 24249 CD4-13 Arabidopsis thaliana cDNA clone E10E9T7, mRNA sequence
Length = 606
Score = 121 bits (61), Expect = 2e-025
Identities = 208/257 (80%)
Strand = Plus / Minus
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|||||||||||||| ||||||||||| || ||||||||||| ||||| || || || |||
Sbjct: 302 ccaagcttgtcaatgttaggatggtatatctttgtgagaaacctaaccttgggagctgcc 243
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
|| || ||||| |||||||| || || || | |||||||||||| |||||||| |||||
Sbjct: 242 atagggtattcttcaggcaaaaagagctccaacttgaaaactcctccttcataaggtgat 183
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| || ||||| ||||||||||| ||||| || || || ||
Sbjct: 182 tgtgtaggaccaagaatcataacgttgaaataccgcatattatcctcagatggagaggca 123
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || || || || ||||| ||||| || || || || ||||||||||||| |||||
Sbjct: 122 cttataccgggagccggttcactgagcagacgttgagtttccttgatgattcttcgcggc 63
Query: 670 agattgctgttggccat 686
| ||| |||||||||||
Sbjct: 62 aaattactgttggccat 46
>emb|BX813701.1|CNS0AEIF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB34ZF06 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 745
Score = 121 bits (61), Expect = 2e-025
Identities = 355/453 (78%)
Strand = Plus / Minus
Query: 234 acttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagcttcgttggattt 293
||||| ||| || |||||||| ||||||||||| || |||||||| || || ||| ||
Sbjct: 550 acttgcgtaaagacgagtccattccttcgctgtttccacagcttctgcctcattgctctt 491
Query: 294 ccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagtgc 353
||| || || || |||| | ||||||||||||||||||||||| || || | ||| ||
Sbjct: 490 ccaatgcttagctatgtgctgagagagaggatcatctgggtttggtgcacttaaaagagc 431
Query: 354 ctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaagaat 413
|| || |||| | || || ||||| || || || |||||||| ||||| || || ||
Sbjct: 430 ttggatactcaagaacacagttcgtatttgtagtgcaggactccacttgtctttcagtat 371
Query: 414 gtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaatct 473
||| ||||| || || ||||||||||| || |||||||||||||| || |||||||| ||
Sbjct: 370 gtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgagaaacct 311
Query: 474 aacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaactcc 533
||| || || || ||||| |||||||| |||||||| || || || | ||||||||||||
Sbjct: 310 aaccttgggagctgccataggatattcttcaggcaaaaagagctccaacttgaaaactcc 251
Query: 534 accttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattctc 593
|||||||| || || || | || ||||| ||||| |||||||| || | |||||| ||
Sbjct: 250 tccttcataaggagattgagtaggaccaagaatcataacattgaaatatctcatattttc 191
Query: 594 ctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctcctt 653
||| || || || || || ||||| || || ||||| || || || || || || |||||
Sbjct: 190 ctctgatggagaagcacttatcccaggagcaggttcactaagcagacgttgagtttcctt 131
Query: 654 gatgattcggcgcgggagattgctgttggccat 686
|||||||| || || ||||| || ||||||||
Sbjct: 130 gatgattcttcggggaagattactattggccat 98
>gb|BP836421.1|BP836421 BP836421 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-16-G06 5',
mRNA sequence
Length = 401
Score = 119 bits (60), Expect = 7e-025
Identities = 237/296 (80%)
Strand = Plus / Minus
Query: 391 ggactccatttgtccttaagaatgtcgaggcatatcctaccaagcttgtcaatattagga 450
|||||||| ||||| || || ||||| ||||| || || ||||||||||| || ||||||
Sbjct: 392 ggactccacttgtctttcagtatgtcaaggcagattcttccaagcttgtcgatgttagga 333
Query: 451 tggtaaatttttgtgagaaatctaacttttggggcagccattggatattcctcaggcaag 510
|||||||| || |||||||| ||||| || || || ||||| |||||||| ||||||||
Sbjct: 332 tggtaaatcttggtgagaaacctaaccttgggagctgccataggatattcttcaggcaaa 273
Query: 511 aatagttcaagcttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatg 570
|| || || | |||||||||||| |||||||| || || || | || ||||| |||||
Sbjct: 272 aagagctccaacttgaaaactcctccttcataaggagattgagtaggaccaagaatcata 213
Query: 571 acattgaagtaccgcatattctcctccgacggcgacgcgctaatccccggtgctggttcg 630
|||||||| || | |||||| ||||| || || ||||| || ||| | || || |||||
Sbjct: 212 acattgaaatatctcatattttcctctgatggagacgcacttatcacaggagcaggttca 153
Query: 631 ctgagaagccgctgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|| || || || || || |||||||||||||| || || ||||| || ||||||||
Sbjct: 152 ctaagcagacgttgagtttccttgatgattcgtcggggaagattactattggccat 97
>gb|BE523894.1|BE523894 M43C2STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M43C2 5', mRNA sequence
Length = 396
Score = 117 bits (59), Expect = 3e-024
Identities = 221/275 (80%)
Strand = Plus / Minus
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
||||| ||||| || || ||||||||||| || |||||||||||||| || ||||||||
Sbjct: 348 atgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgagaaac 289
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
||||| || || || ||||| |||||||| |||||||| || || || | ||||||||||
Sbjct: 288 ctaaccttgggagctgccataggatattcttcaggcaaaaagagctccaacttgaaaact 229
Query: 532 ccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattc 591
|| |||||||| || || || | || ||||| ||||| |||||||| || | ||||||
Sbjct: 228 cctccttcataaggagattgagtaggaccaagaatcataacattgaaatatctcatattt 169
Query: 592 tcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctcc 651
||||| || || ||||| || ||||| || || ||||| || || || || || || |||
Sbjct: 168 tcctctgatggagacgcacttatcccaggagcaggttcactaagcagacgttgagtttcc 109
Query: 652 ttgatgattcggcgcgggagattgctgttggccat 686
||||||||||| || || ||||| || ||||||||
Sbjct: 108 ttgatgattcgtcggggaagattactattggccat 74
>gb|T43710.1|T43710 6973 Lambda-PRL2 Arabidopsis thaliana cDNA clone 122K3T7, mRNA
sequence
Length = 491
Score = 115 bits (58), Expect = 1e-023
Identities = 248/312 (79%)
Strand = Plus / Minus
Query: 231 cccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagcttcgttgga 290
|||||||| ||| || |||||||| ||||| ||||| || |||||||| || || |||
Sbjct: 324 cccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattgct 265
Query: 291 tttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaag 350
||||| || || || ||||| || || |||||||||||||||||||| || || | |||
Sbjct: 264 cttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaaag 205
Query: 351 tgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaag 410
|| || || |||| || || || ||||| || || || |||||||| ||||| || ||
Sbjct: 204 agcttggatactcaagagcacagttcgtatttgtagtgcaggactccacttgtctttcag 145
Query: 411 aatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaa 470
||||| ||||| || || ||||||||||| || |||||||||||||| || || |||||
Sbjct: 144 tatgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtnagaaa 85
Query: 471 tctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaac 530
||||| || || || ||||| |||||||| |||||||| || || || |||||||||
Sbjct: 84 cctaaccttgggagctgccataggatattcttcaggcaaaaagagctccnacttgaaaac 25
Query: 531 tccaccttcata 542
||| ||||||||
Sbjct: 24 tcctccttcata 13
>gb|BP819994.1|BP819994 BP819994 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-53-B19 5',
mRNA sequence
Length = 398
Score = 105 bits (53), Expect = 1e-020
Identities = 206/257 (80%)
Strand = Plus / Minus
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|||||||| ||||| ||||||||||| || ||||||||||| ||||| || || || |||
Sbjct: 391 ccaagcttatcaatgttaggatggtatatctttgtgagaaacctaaccttgggagctgcc 332
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
|| || ||||| |||||||| || || || | |||||||||||| |||||||| |||||
Sbjct: 331 atagggtattcttcaggcaaaaagagctccaacttgaaaactcctccttcataaggtgat 272
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| || ||||| ||||||||||| ||||| || || || ||
Sbjct: 271 tgtgtaggaccaagaatcataacgttgaaataccgcatattatcctcagatggagaggca 212
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || || || || ||||| ||||| || | || || ||||||||||||| |||||
Sbjct: 211 cttataccgggagccggttcactgagcagaccttgagtttccttgatgattcttcgcggc 152
Query: 670 agattgctgttggccat 686
| ||| |||||||||||
Sbjct: 151 aaattactgttggccat 135
>gb|BP851319.1|BP851319 BP851319 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-16-A08 5',
mRNA sequence
Length = 397
Score = 105 bits (53), Expect = 1e-020
Identities = 207/257 (80%), Gaps = 1/257 (0%)
Strand = Plus / Minus
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|||||||||||||| ||||||||||| || ||||||| ||| ||||| || || || |||
Sbjct: 390 ccaagcttgtcaatgttaggatggtatatctttgtga-aaacctaaccttgggagctgcc 332
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
|| || ||||| |||||||| || || || | |||||||||||| |||||||| |||||
Sbjct: 331 atagggtattcttcaggcaaaaagagctccaacttgaaaactcctccttcataaggtgat 272
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| || ||||| ||||||||||| ||||| || || || ||
Sbjct: 271 tgtgtaggaccaagaatcataacgttgaaataccgcatattatcctcagatggagaggca 212
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || || || || ||||| ||||| || || || || ||||||||||||| |||||
Sbjct: 211 cttataccgggagccggttcactgagcagacgttgagtttccttgatgattcttcgcggc 152
Query: 670 agattgctgttggccat 686
| ||| |||||||||||
Sbjct: 151 aaattactgttggccat 135
>gb|H37659.1|H37659 15788 Lambda-PRL2 Arabidopsis thaliana cDNA clone 184O11T7, mRNA
sequence
Length = 509
Score = 99.6 bits (50), Expect = 7e-019
Identities = 207/258 (80%), Gaps = 1/258 (0%)
Strand = Plus / Minus
Query: 430 ccaagcttgtcaatattaggatgg-taaatttttgtgagaaatctaacttttggggcagc 488
||||||||||| || ||||||||| ||||| || |||||||| ||||| || || || ||
Sbjct: 342 ccaagcttgtcgatgttaggatgggtaaatcttggtgagaaacctaaccttgggagctgc 283
Query: 489 cattggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtga 548
||| |||||||| |||||||| || || || | |||||||||||| |||||||| || ||
Sbjct: 282 cataggatattcttcaggcaaaaagagctccaacttgaaaactcctccttcataaggaga 223
Query: 549 ctgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgc 608
|| | || ||||| ||||| |||||||| || | |||||| ||||| || || |||||
Sbjct: 222 ttgagtaggaccaagaatcataacattgaaatatctcatattttcctctgatggagacgc 163
Query: 609 gctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcgg 668
|| ||||| || || ||||| || || || || || || |||||||||||||| || ||
Sbjct: 162 acttatcccaggagcaggttcactaagcagacgttgagtttccttgatgattcgtcgggg 103
Query: 669 gagattgctgttggccat 686
||||| || ||||||||
Sbjct: 102 aagattactattggccat 85
>gb|AV794908.1|AV794908 AV794908 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-15-C17 3',
mRNA sequence
Length = 424
Score = 99.6 bits (50), Expect = 7e-019
Identities = 143/174 (82%)
Strand = Plus / Plus
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
|||||||| || |||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 251 ttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcactcagaaga 310
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| ||||| || | || ||||| ||||| || || || || |||||||||||||| |||
Sbjct: 311 gcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtccttgaga 370
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtg 465
|| || || || || || |||||||||||||| ||||||||||| || ||||||
Sbjct: 371 atatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgtg 424
>gb|T46680.1|T46680 9943 Lambda-PRL2 Arabidopsis thaliana cDNA clone 139O4T7, mRNA
sequence
Length = 453
Score = 97.6 bits (49), Expect = 3e-018
Identities = 209/263 (79%)
Strand = Plus / Minus
Query: 424 atcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggg 483
||||| ||||||||| | || |||||||||||||| || || ||||| ||||| || ||
Sbjct: 324 atccttccaagcttgccgatgttaggatggtaaatcttggttagaaacctaaccttggga 265
Query: 484 gcagccattggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatag 543
|| ||||| |||||||| |||||||| || || || | |||||||||||| ||||||||
Sbjct: 264 gctgccataggatattcntcaggcaaaaagagctccaacttgaaaactcctccttcataa 205
Query: 544 ggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggc 603
|| || || | || || || ||||| |||||||| || | |||||| ||||| || ||
Sbjct: 204 ggagattgagtaggaccnagaatcataacattgaaatatctcatattttcctctgatgga 145
Query: 604 gacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcgg 663
||||| || ||||| || || ||||| || || || || || || ||||||||||||||
Sbjct: 144 gacgcacttatcccaggagcaggttcactaagcagacgttgagtttccttgatgattcgt 85
Query: 664 cgcgggagattgctgttggccat 686
|| || ||||| || ||||||||
Sbjct: 84 cggggaagattactattggccat 62
>gb|BP837747.1|BP837747 BP837747 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-21-L19 5',
mRNA sequence
Length = 378
Score = 95.6 bits (48), Expect = 1e-017
Identities = 220/276 (79%), Gaps = 1/276 (0%)
Strand = Plus / Minus
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
||||| ||||| || || ||||||||||| || |||||||||||||| || ||||||||
Sbjct: 372 atgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgagaaac 313
Query: 472 ctaacttttggg-gcagccattggatattcctcaggcaagaatagttcaagcttgaaaac 530
||||| ||||| || ||||| |||||||| |||||||| || || || | |||| ||||
Sbjct: 312 ctaacccttgggagctgccataggatattcttcaggcaaaaagagctccaacttggaaac 253
Query: 531 tccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatatt 590
||| |||||||| || || || | || ||||| ||||| |||||||| || | ||||||
Sbjct: 252 tcctccttcataaggagattgagtaggaccaagaatcataacattgaaatatctcatatt 193
Query: 591 ctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctc 650
||||| || || ||||| || ||| | || || ||||| || || || || || || ||
Sbjct: 192 ttcctctgatggagacgcacttatcacaggagcaggttcactaagcagacgttgagtttc 133
Query: 651 cttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||| || || ||||| || ||||||||
Sbjct: 132 cttgatgattcgtcggggaagattactattggccat 97
>gb|BP854585.1|BP854585 BP854585 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-23-M09 5',
mRNA sequence
Length = 373
Score = 95.6 bits (48), Expect = 1e-017
Identities = 220/276 (79%), Gaps = 1/276 (0%)
Strand = Plus / Minus
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaat 471
||||| ||||| || || ||||||||||| || |||||||||||||| || ||||||||
Sbjct: 371 atgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgagaaac 312
Query: 472 ctaacttttggggcagccattggatattcctcaggcaagaatagttcaagcttgaaaact 531
||||| || || || ||||| |||||||| |||||||| || || || | ||||||||||
Sbjct: 311 ctaaccttgggagctgccataggatattcttcaggcaaaaagagctccaacttgaaaact 252
Query: 532 ccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgca-tatt 590
|| |||||||| || || || | || ||||| ||||| |||||||| || | || ||||
Sbjct: 251 cctccttcataaggagattgagtaggaccaagaatcataacattgaaatatctcattatt 192
Query: 591 ctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctc 650
||||| || || ||||| || ||||| || || ||||| || | || || || || ||
Sbjct: 191 ttcctctgatggagacgcacttatcccaggagcaggttcactaaccagacgttgagtttc 132
Query: 651 cttgatgattcggcgcgggagattgctgttggccat 686
|||||||||||| || || ||||| || ||||||||
Sbjct: 131 cttgatgattcgtcggggaagattactattggccat 96
>gb|BP857352.1|BP857352 BP857352 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-33-E14 5',
mRNA sequence
Length = 375
Score = 89.7 bits (45), Expect = 6e-016
Identities = 96/113 (84%)
Strand = Plus / Minus
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|||||||||||||| ||||||||||| || ||||||||||| ||||| || || || |||
Sbjct: 357 ccaagcttgtcaatgttaggatggtatatctttgtgagaaacctaaccttgggagctgcc 298
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcata 542
|| || ||||| |||||||| || || || | |||||||||||| ||||||||
Sbjct: 297 atagggtattcttcaggcaaaaagagctccaacttgaaaactcctccttcata 245
>gb|BP565033.1|BP565033 BP565033 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-10-I23 3',
mRNA sequence
Length = 411
Score = 85.7 bits (43), Expect = 1e-014
Identities = 130/159 (81%)
Strand = Plus / Plus
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
|||||||| || |||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 253 ttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcactcagaaga 312
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| ||||| || | || ||||| ||||| || || || || |||||||||||||| |||
Sbjct: 313 gcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtccttgaga 372
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattagga 450
|| || || || || || |||||||||||||| ||||||
Sbjct: 373 atatcaagacagattcttccaagcttgtcaatgttagga 411
>gb|AV553815.1|AV553815 AV553815 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ73a08R 5', mRNA sequence
Length = 388
Score = 81.8 bits (41), Expect = 2e-013
Identities = 140/173 (80%)
Strand = Plus / Minus
Query: 445 ttaggatggtaaatttttgtgagaaatctaacttttggggcagccattggatattcctca 504
|||||||||||||| || |||||||| ||||| || || || ||||| |||||||| |||
Sbjct: 380 ttaggatggtaaatcttggtgagaaacctaaccttgggagctgccataggatattcttca 321
Query: 505 ggcaagaatagttcaagcttgaaaactccaccttcatagggtgactgcgcggggccaagg 564
||||| || || || | |||||||||||| |||||||| || || || | || |||||
Sbjct: 320 ggcaaaaagagctccaacttgaaaactcctccttcataaggagattgagtaggaccaaga 261
Query: 565 atcatgacattgaagtaccgcatattctcctccgacggcgacgcgctaatccc 617
||||| |||||||| || | |||||| ||||| || || ||||| || |||||
Sbjct: 260 atcataacattgaaatatctcatattttcctctgatggagacgcacttatccc 208
>gb|BP621472.1|BP621472 BP621472 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-41-K08 3',
mRNA sequence
Length = 422
Score = 77.8 bits (39), Expect = 2e-012
Identities = 180/227 (79%)
Strand = Plus / Plus
Query: 232 ccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagcttcgttggat 291
||||||| ||| || |||||||| ||||| ||||| || |||||||| || || |||
Sbjct: 193 ccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattgctc 252
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
||||| || || || ||||| || || |||||||||||||||||||| || || | |||
Sbjct: 253 ttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaaaga 312
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| || || |||| || || || ||||| || || || |||||||| ||||| || ||
Sbjct: 313 gcttggatactcaagagcacagttcgtatttgtagtgcaggactccacttgtctttcagt 372
Query: 412 atgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaat 458
||||| ||||| || || ||||||||||| || ||||||||||||||
Sbjct: 373 atgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaat 419
>emb|BX813418.1|CNS0ACA7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB16ZE06 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1385
Score = 77.8 bits (39), Expect = 2e-012
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 394 ctccatttgtccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatgg 453
|||||||||||||| ||||| || || || || || |||||||||||||| |||||||||
Sbjct: 959 ctccatttgtccttgagaatatcaagacagattcttccaagcttgtcaatgttaggatgg 900
Query: 454 taaatttttgtgagaaatctaac 476
|| || ||||||||||| |||||
Sbjct: 899 tatatctttgtgagaaacctaac 877
Score = 56.0 bits (28), Expect = 9e-006
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
|||||||| || |||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 1164 ttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcactcagaaga 1105
Query: 352 gcctgaat 359
|| |||||
Sbjct: 1104 gcttgaat 1097
Score = 50.1 bits (25), Expect = 5e-004
Identities = 121/153 (79%)
Strand = Plus / Minus
Query: 534 accttcatagggtgactgcgcggggccaaggatcatgacattgaagtaccgcatattctc 593
||||||||| ||||| || | || ||||| ||||| || ||||| ||||||||||| ||
Sbjct: 246 accttcataaggtgattgtgtaggaccaagaatcataacgttgaaataccgcatattatc 187
Query: 594 ctccgacggcgacgcgctaatccccggtgctggttcgctgagaagccgctgcgtctcctt 653
||| || || || || || || || || || ||||| ||||| || || || || |||||
Sbjct: 186 ctcagatggagaggcacttataccgggagccggttcactgagcagacgttgagtttcctt 127
Query: 654 gatgattcggcgcgggagattgctgttggccat 686
|||||||| ||||| | ||| |||||||||||
Sbjct: 126 gatgattcttcgcggcaaattactgttggccat 94
>gb|AA712478.1|AA712478 32193 Lambda-PRL2 Arabidopsis thaliana cDNA clone 194K16T7, mRNA
sequence
Length = 452
Score = 73.8 bits (37), Expect = 4e-011
Identities = 193/246 (78%)
Strand = Plus / Minus
Query: 231 cccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagcttcgttgga 290
|||||||| ||| || |||||||| ||||| ||||| || |||||||| || || |||
Sbjct: 266 cccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattgct 207
Query: 291 tttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaag 350
||||| || || || ||||| || || |||||||||||||||||||| || || | |||
Sbjct: 206 cttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaaag 147
Query: 351 tgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaag 410
|| || || || | || || || ||||| || || || |||||||| ||||| || ||
Sbjct: 146 agcttggatactnaagagcacagttcgtatttgtagtgcaggactccacttgtctttcag 87
Query: 411 aatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaatttttgtgagaaa 470
||||| ||| | || || ||||||||||| || |||||||||||||| || || |||||
Sbjct: 86 tatgtcaaggnagattcttccaagcttgtcgatgttaggatggtaaatcttggtnagaaa 27
Query: 471 tctaac 476
|||||
Sbjct: 26 cctaac 21
>gb|AV792906.1|AV792906 AV792906 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-17-D23 3',
mRNA sequence
Length = 417
Score = 73.8 bits (37), Expect = 4e-011
Identities = 134/165 (81%), Gaps = 1/165 (0%)
Strand = Plus / Plus
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
|||||||| || |||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 251 ttccagtgcttagcaatgttctcagaaaggggatcatctgggtttggtgcactcagaaga 310
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| ||||| || | || ||||| ||||| || || || || ||||||||||| || |||
Sbjct: 311 gcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtctttgaga 370
Query: 412 atgtcgaggcatatcctaccaagcttgtcaa-tattaggatggta 455
|| || || || || || ||||||||||||| | |||||||||||
Sbjct: 371 atatcaagacagattcttccaagcttgtcaactgttaggatggta 415
>gb|H36151.1|H36151 14673 Lambda-PRL2 Arabidopsis thaliana cDNA clone 174L13T7, mRNA
sequence
Length = 512
Score = 71.9 bits (36), Expect = 1e-010
Identities = 159/200 (79%)
Strand = Plus / Minus
Query: 487 gccattggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggt 546
||||| || ||||| |||||||| || || || | |||||||||||| |||||||| |||
Sbjct: 319 gccatagggtattcttcaggcaaaaagagctccaacttgaaaactcctccttcataaggt 260
Query: 547 gactgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgac 606
|| || | || ||||| ||||| || ||||| ||||||||||| ||||| || || ||
Sbjct: 259 gattgtgtaggaccaagaatcataacgttgaaataccgcatattatcctcagatggagag 200
Query: 607 gcgctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgc 666
|| || || || || || ||||| ||||| || || || || ||||||||||||| |||
Sbjct: 199 gcacttataccgggagccggttcactgagcagacgttgagtttccttgatgattcttcgc 140
Query: 667 gggagattgctgttggccat 686
|| | ||| |||||||||||
Sbjct: 139 ggcaaattactgttggccat 120
>gb|AV820658.1|AV820658 AV820658 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-11-J19 3',
mRNA sequence
Length = 420
Score = 71.9 bits (36), Expect = 1e-010
Identities = 124/152 (81%), Gaps = 1/152 (0%)
Strand = Plus / Plus
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
|||||||| || |||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 267 ttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcactcagaaga 326
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| ||||| || | || ||||| ||||| || || || || |||||||||||||| |||
Sbjct: 327 gcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtccttgaga 386
Query: 412 atgtcgaggcatatcctaccaagcttgtcaat 443
|| || || || || || ||||||||||||||
Sbjct: 387 atatcaagacagattct-ccaagcttgtcaat 417
>gb|BP822506.1|BP822506 BP822506 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-61-M20 5',
mRNA sequence
Length = 375
Score = 71.9 bits (36), Expect = 1e-010
Identities = 203/256 (79%), Gaps = 2/256 (0%)
Strand = Plus / Minus
Query: 433 agcttgtcaatattaggatggtaaatttttgtgagaaatctaa-cttttggggcagccat 491
|||||||| || |||||||||||||| || |||||||| |||| | || || || |||||
Sbjct: 353 agcttgtcgatgttaggatggtaaatcttggtgagaaacctaagccttgggagctgccat 294
Query: 492 tggatattcctcaggcaagaatag-ttcaagcttgaaaactccaccttcatagggtgact 550
|||||||| |||||| | || || | | |||||||||||||| |||||||| || || |
Sbjct: 293 aggatattcttcaggccaaaagagctcccagcttgaaaactcctccttcataaggagatt 234
Query: 551 gcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcgc 610
| | || ||||| ||||| |||||||| || | |||||| ||||| || || ||||| |
Sbjct: 233 gagtaggaccaagaatcataacattgaaatatctcatattttcctctgatggagacgcac 174
Query: 611 taatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggga 670
| ||| | || || ||||| || || || || || || |||||||||||||| || || |
Sbjct: 173 ttatcacaggagcaggttcactaagcagacgttgagtttccttgatgattcgtcggggaa 114
Query: 671 gattgctgttggccat 686
|||| || ||||||||
Sbjct: 113 gattactattggccat 98
>gb|AV809348.1|AV809348 AV809348 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-59-C17 3',
mRNA sequence
Length = 435
Score = 67.9 bits (34), Expect = 2e-009
Identities = 121/150 (80%)
Strand = Plus / Plus
Query: 292 ttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcgctcagaagt 351
|||||||| || |||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 282 ttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcactcagaaga 341
Query: 352 gcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttgtccttaaga 411
|| ||||| || | || ||||| ||||| || || | || |||||||||||||| |||
Sbjct: 342 gcttgaatacttaagagcactgttcgtatttgtagtggagggctccatttgtccttgaga 401
Query: 412 atgtcgaggcatatcctaccaagcttgtca 441
|| || || || || || ||||||||||||
Sbjct: 402 atatcaagacagattcttccaagcttgtca 431
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 282,084
Number of Sequences: 1013581
Number of extensions: 282084
Number of successful extensions: 19644
Number of sequences better than 0.5: 100
Number of HSP's better than 0.5 without gapping: 95
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 18752
Number of HSP's gapped (non-prelim): 857
length of query: 730
length of database: 908,940,872
effective HSP length: 20
effective length of query: 710
effective length of database: 888,669,252
effective search space: 630955168920
effective search space used: 630955168920
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)