BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2591032.2.1
(735 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY054227.1| Arabidopsis thaliana AT5g47750/MCA23_7 mRNA,... 80 6e-013
gb|AY062501.1| Arabidopsis thaliana protein kinase 5 (MCA23... 80 6e-013
gb|AY093303.1| Arabidopsis thaliana protein kinase 5 (MCA23... 80 6e-013
gb|AY113177.1| Arabidopsis thaliana AT5g47750/MCA23_7 mRNA,... 80 6e-013
dbj|D10909.1|ATHPK5 Arabidopsis thaliana gene for serine/th... 80 6e-013
dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosom... 80 6e-013
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 80 6e-013
ref|NM_124149.2| Arabidopsis thaliana kinase AT5G47750 mRNA... 80 6e-013
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 80 6e-013
emb|AX507823.1| Sequence 2518 from Patent WO0216655 76 1e-011
gb|BT010571.1| Arabidopsis thaliana At3g27580 gene, complet... 76 1e-011
dbj|D10910.1|ATHATPK Arabidopsis thaliana Atpk7 gene for se... 76 1e-011
dbj|AB025626.1| Arabidopsis thaliana genomic DNA, chromosom... 76 1e-011
dbj|AK175529.1| Arabidopsis thaliana mRNA for serine/threon... 76 1e-011
dbj|AK176399.1| Arabidopsis thaliana mRNA for serine/threon... 76 1e-011
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 76 1e-011
ref|NM_113674.2| Arabidopsis thaliana ATPK7; kinase AT3G275... 76 1e-011
ref|NM_001035707.1| Arabidopsis thaliana ATPK7; kinase AT3G... 76 1e-011
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 76 1e-011
gb|CF772922.1|CF772922 AG_FSL_10A06 Arabidopsis ag-1 35S:AG... 68 2e-009
ref|NM_124148.2| Arabidopsis thaliana unknown protein AT5G4... 68 2e-009
gb|BP633987.1|BP633987 BP633987 RAFL17 Arabidopsis thaliana... 64 4e-008
gb|B29006.1|B29006 T23M18TR TAMU Arabidopsis thaliana genom... 60 6e-007
gb|B29138.1|B29138 T27C20TF TAMU Arabidopsis thaliana genom... 60 6e-007
gb|B78430.1|B78430 T27C20TF.1 TAMU Arabidopsis thaliana gen... 60 6e-007
gb|BZ660643.1|BZ660643 SALK_024096.46.25.x Arabidopsis thal... 60 6e-007
gb|AA042649.1|AA042649 24945 CD4-13 Arabidopsis thaliana cD... 60 6e-007
gb|AI996119.1|AI996119 701550103 A. thaliana, Columbia Col-... 60 6e-007
gb|AV782741.1|AV782741 AV782741 RAFL4 Arabidopsis thaliana ... 60 6e-007
gb|AV788423.1|AV788423 AV788423 RAFL6 Arabidopsis thaliana ... 60 6e-007
gb|CB260202.1|CB260202 86-E9535-013-002-K21-T7R MPIZ-ADIS-0... 60 6e-007
gb|AV522980.1|AV522980 AV522980 Arabidopsis thaliana aboveg... 60 6e-007
gb|AV523248.1|AV523248 AV523248 Arabidopsis thaliana aboveg... 60 6e-007
gb|AV523791.1|AV523791 AV523791 Arabidopsis thaliana aboveg... 60 6e-007
gb|AV565592.1|AV565592 AV565592 Arabidopsis thaliana green ... 60 6e-007
gb|BP585593.1|BP585593 BP585593 RAFL15 Arabidopsis thaliana... 60 6e-007
gb|BP610162.1|BP610162 BP610162 RAFL16 Arabidopsis thaliana... 60 6e-007
gb|BP611242.1|BP611242 BP611242 RAFL16 Arabidopsis thaliana... 60 6e-007
gb|BP618438.1|BP618438 BP618438 RAFL16 Arabidopsis thaliana... 60 6e-007
gb|AF236104.1|AF236104 Arabidopsis thaliana protein kinase ... 60 6e-007
gb|AY078927.1| Arabidopsis thaliana At2g44830/T13E15.16 mRN... 60 6e-007
gb|AY124003.1| Arabidopsis thaliana AT3g52890/F8J2_60 mRNA,... 60 6e-007
gb|AY063923.1| Arabidopsis thaliana putative protein kinase... 60 6e-007
gb|AY091248.1| Arabidopsis thaliana putative protein kinase... 60 6e-007
emb|AX506135.1| Sequence 830 from Patent WO0216655 60 6e-007
gb|BT001910.1| Arabidopsis thaliana clone C105065 putative ... 60 6e-007
gb|BT002286.1| Arabidopsis thaliana At3g52890/F8J2_60 mRNA,... 60 6e-007
gb|AC002986.1|YUP8H12R Arabidopsis thaliana chromosome 1 YA... 60 6e-007
gb|AC002388.3| Arabidopsis thaliana chromosome 2 clone T13E... 60 6e-007
emb|BX833587.1|CNS0A0GL Arabidopsis thaliana Full-length cD... 60 6e-007
emb|BX830203.1|CNS0A26F Arabidopsis thaliana Full-length cD... 60 6e-007
emb|BX830414.1|CNS0A26H Arabidopsis thaliana Full-length cD... 60 6e-007
emb|BX817232.1|CNS0AASR Arabidopsis thaliana Full-length cD... 60 6e-007
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 60 6e-007
dbj|AB026659.1| Arabidopsis thaliana genomic DNA, chromosom... 60 6e-007
dbj|D10937.1|ATHATPK64 Arabidopsis thaliana ATPK64 mRNA for... 60 6e-007
emb|AL078465.1|ATT15N24 Arabidopsis thaliana DNA chromosome... 60 6e-007
emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosom... 60 6e-007
emb|AL132969.2|ATF8J2 Arabidopsis thaliana DNA chromosome 3... 60 6e-007
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 60 6e-007
ref|NM_118795.2| Arabidopsis thaliana kinase AT4G26610 mRNA... 60 6e-007
ref|NM_180095.1| Arabidopsis thaliana kinase AT2G44830 mRNA... 60 6e-007
ref|NM_115149.2| Arabidopsis thaliana KIPK (KCBP-INTERACTIN... 60 6e-007
ref|NM_180356.1| Arabidopsis thaliana KIPK (KCBP-INTERACTIN... 60 6e-007
ref|NM_106575.2| Arabidopsis thaliana kinase AT1G79250 mRNA... 60 6e-007
ref|NM_124973.3| Arabidopsis thaliana kinase AT5G55910 mRNA... 60 6e-007
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 60 6e-007
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 60 6e-007
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 60 6e-007
gb|BP588466.1|BP588466 BP588466 RAFL15 Arabidopsis thaliana... 56 9e-006
gb|BP598074.1|BP598074 BP598074 RAFL16 Arabidopsis thaliana... 56 9e-006
gb|BP612233.1|BP612233 BP612233 RAFL16 Arabidopsis thaliana... 56 9e-006
gb|BP616826.1|BP616826 BP616826 RAFL16 Arabidopsis thaliana... 56 9e-006
gb|BP624364.1|BP624364 BP624364 RAFL17 Arabidopsis thaliana... 56 9e-006
gb|BP649445.1|BP649445 BP649445 RAFL19 Arabidopsis thaliana... 56 9e-006
dbj|AB024033.1| Arabidopsis thaliana genomic DNA, chromosom... 56 9e-006
gb|BT011689.1| Arabidopsis thaliana At3g12690 gene, complet... 56 9e-006
gb|BT020332.1| Arabidopsis thaliana At3g12690 gene, complet... 56 9e-006
ref|NM_112105.2| Arabidopsis thaliana kinase AT3G12690 tran... 56 9e-006
ref|NM_202566.1| Arabidopsis thaliana kinase AT3G12690 tran... 56 9e-006
ref|NM_202567.1| Arabidopsis thaliana kinase AT3G12690 tran... 56 9e-006
gb|CL470926.1|CL470926 SAIL_151_B12.v1 SAIL Collection Arab... 52 1e-004
emb|BX942962.1| Arabidopsis thaliana T-DNA flanking sequenc... 52 1e-004
emb|CT026263.1| Arabidopsis thaliana T-DNA flanking sequenc... 52 1e-004
gb|BP594863.1|BP594863 BP594863 RAFL15 Arabidopsis thaliana... 52 1e-004
emb|AJ601146.1| Arabidopsis thaliana T-DNA flanking sequenc... 50 5e-004
gb|BX834961.1|BX834961 BX834961 Arabidopsis thaliana Hormon... 50 5e-004
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 50 5e-004
emb|AJ553505.1|ATH553505 Arabidopsis thaliana T-DNA flankin... 50 5e-004
gb|AC006341.2|F3O9 Arabidopsis thaliana chromosome 1 BAC F3... 50 5e-004
ref|NM_101510.2| Arabidopsis thaliana kinase AT1G16440 mRNA... 50 5e-004
gb|AV564555.1|AV564555 AV564555 Arabidopsis thaliana green ... 48 0.002
gb|BP587252.1|BP587252 BP587252 RAFL15 Arabidopsis thaliana... 48 0.002
gb|BP605202.1|BP605202 BP605202 RAFL16 Arabidopsis thaliana... 48 0.002
gb|BP616103.1|BP616103 BP616103 RAFL16 Arabidopsis thaliana... 48 0.002
gb|AV440773.1|AV440773 AV440773 Arabidopsis thaliana above-... 46 0.009
gb|AV543295.1|AV543295 AV543295 Arabidopsis thaliana roots ... 46 0.009
gb|AV547469.1|AV547469 AV547469 Arabidopsis thaliana roots ... 46 0.009
emb|AX651684.1| Sequence 507 from Patent WO03000898 46 0.009
gb|AC006921.6| Arabidopsis thaliana chromosome 2 clone F2H1... 46 0.009
emb|BX842460.1|CNS0A9E2 Arabidopsis thaliana Full-length cD... 46 0.009
emb|BX822526.1|CNS0A76H Arabidopsis thaliana Full-length cD... 46 0.009
emb|BX823109.1|CNS0A74V Arabidopsis thaliana Full-length cD... 46 0.009
emb|AL138652.1|ATT18B22 Arabidopsis thaliana DNA chromosome... 46 0.009
ref|NM_129192.2| Arabidopsis thaliana kinase AT2G36350 mRNA... 46 0.009
ref|NM_114329.2| Arabidopsis thaliana kinase AT3G44610 mRNA... 46 0.009
emb|AL755737.1| Arabidopsis thaliana T-DNA flanking sequenc... 44 0.034
gb|AV547201.1|AV547201 AV547201 Arabidopsis thaliana roots ... 44 0.034
gb|CL466374.1|CL466374 SAIL_1255_B01.v1 SAIL Collection Ara... 42 0.13
gb|CL486516.1|CL486516 SAIL_436_C09.v1 SAIL Collection Arab... 42 0.13
gb|CL493650.1|CL493650 SAIL_582_D05.v1 SAIL Collection Arab... 42 0.13
gb|AA041115.1|AA041115 24381 CD4-13 Arabidopsis thaliana cD... 42 0.13
gb|BP604903.1|BP604903 BP604903 RAFL16 Arabidopsis thaliana... 42 0.13
gb|BP612466.1|BP612466 BP612466 RAFL16 Arabidopsis thaliana... 42 0.13
>gb|AY054227.1| Arabidopsis thaliana AT5g47750/MCA23_7 mRNA, complete cds
Length = 2143
Score = 79.8 bits (40), Expect = 6e-013
Identities = 97/116 (83%)
Strand = Plus / Minus
Query: 571 cccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccag 630
|||||||| ||||| |||| || || |||||||| | ||||| ||| || ||||||||
Sbjct: 1594 cccttgaagggcgttctcccaaagagaagctcgtaaaggaatatcccaaaagtccaccaa 1535
Query: 631 tcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtg 686
|| || || |||||||| || ||||||||||||||||| ||||||| |||||||||
Sbjct: 1534 tccactgcactgccatgcccttcgcctttgatgatctctggggccaagtactcgtg 1479
>gb|AY062501.1| Arabidopsis thaliana protein kinase 5 (MCA23.7) mRNA, complete cds
Length = 2251
Score = 79.8 bits (40), Expect = 6e-013
Identities = 97/116 (83%)
Strand = Plus / Minus
Query: 571 cccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccag 630
|||||||| ||||| |||| || || |||||||| | ||||| ||| || ||||||||
Sbjct: 1652 cccttgaagggcgttctcccaaagagaagctcgtaaaggaatatcccaaaagtccaccaa 1593
Query: 631 tcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtg 686
|| || || |||||||| || ||||||||||||||||| ||||||| |||||||||
Sbjct: 1592 tccactgcactgccatgcccttcgcctttgatgatctctggggccaagtactcgtg 1537
>gb|AY093303.1| Arabidopsis thaliana protein kinase 5 (MCA23.7) mRNA, complete cds
Length = 1855
Score = 79.8 bits (40), Expect = 6e-013
Identities = 97/116 (83%)
Strand = Plus / Minus
Query: 571 cccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccag 630
|||||||| ||||| |||| || || |||||||| | ||||| ||| || ||||||||
Sbjct: 1406 cccttgaagggcgttctcccaaagagaagctcgtaaaggaatatcccaaaagtccaccaa 1347
Query: 631 tcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtg 686
|| || || |||||||| || ||||||||||||||||| ||||||| |||||||||
Sbjct: 1346 tccactgcactgccatgcccttcgcctttgatgatctctggggccaagtactcgtg 1291
>gb|AY113177.1| Arabidopsis thaliana AT5g47750/MCA23_7 mRNA, complete cds
Length = 1761
Score = 79.8 bits (40), Expect = 6e-013
Identities = 97/116 (83%)
Strand = Plus / Minus
Query: 571 cccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccag 630
|||||||| ||||| |||| || || |||||||| | ||||| ||| || ||||||||
Sbjct: 1406 cccttgaagggcgttctcccaaagagaagctcgtaaaggaatatcccaaaagtccaccaa 1347
Query: 631 tcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtg 686
|| || || |||||||| || ||||||||||||||||| ||||||| |||||||||
Sbjct: 1346 tccactgcactgccatgcccttcgcctttgatgatctctggggccaagtactcgtg 1291
>dbj|D10909.1|ATHPK5 Arabidopsis thaliana gene for serine/threonine protein kinase,
complete cds
Length = 4059
Score = 79.8 bits (40), Expect = 6e-013
Identities = 97/116 (83%)
Strand = Plus / Minus
Query: 571 cccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccag 630
|||||||| ||||| |||| || || |||||||| | ||||| ||| || ||||||||
Sbjct: 3595 cccttgaagggcgttctcccaaagagaagctcgtaaaggaatatcccaaaagtccaccaa 3536
Query: 631 tcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtg 686
|| || || |||||||| || ||||||||||||||||| ||||||| |||||||||
Sbjct: 3535 tccactgcactgccatgcccttcgcctttgatgatctctggggccaagtactcgtg 3480
>dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCA23
Length = 82503
Score = 79.8 bits (40), Expect = 6e-013
Identities = 97/116 (83%)
Strand = Plus / Plus
Query: 571 cccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccag 630
|||||||| ||||| |||| || || |||||||| | ||||| ||| || ||||||||
Sbjct: 17535 cccttgaagggcgttctcccaaagagaagctcgtaaaggaatatcccaaaagtccaccaa 17594
Query: 631 tcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtg 686
|| || || |||||||| || ||||||||||||||||| ||||||| |||||||||
Sbjct: 17595 tccactgcactgccatgcccttcgcctttgatgatctctggggccaagtactcgtg 17650
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 79.8 bits (40), Expect = 6e-013
Identities = 97/116 (83%)
Strand = Plus / Plus
Query: 571 cccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccag 630
|||||||| ||||| |||| || || |||||||| | ||||| ||| || ||||||||
Sbjct: 17480429 cccttgaagggcgttctcccaaagagaagctcgtaaaggaatatcccaaaagtccaccaa 17480488
Query: 631 tcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtg 686
|| || || |||||||| || ||||||||||||||||| ||||||| |||||||||
Sbjct: 17480489 tccactgcactgccatgcccttcgcctttgatgatctctggggccaagtactcgtg 17480544
>ref|NM_124149.2| Arabidopsis thaliana kinase AT5G47750 mRNA, complete cds
Length = 2272
Score = 79.8 bits (40), Expect = 6e-013
Identities = 97/116 (83%)
Strand = Plus / Minus
Query: 571 cccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccag 630
|||||||| ||||| |||| || || |||||||| | ||||| ||| || ||||||||
Sbjct: 1673 cccttgaagggcgttctcccaaagagaagctcgtaaaggaatatcccaaaagtccaccaa 1614
Query: 631 tcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtg 686
|| || || |||||||| || ||||||||||||||||| ||||||| |||||||||
Sbjct: 1613 tccactgcactgccatgcccttcgcctttgatgatctctggggccaagtactcgtg 1558
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 79.8 bits (40), Expect = 6e-013
Identities = 97/116 (83%)
Strand = Plus / Plus
Query: 571 cccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccag 630
|||||||| ||||| |||| || || |||||||| | ||||| ||| || ||||||||
Sbjct: 19357528 cccttgaagggcgttctcccaaagagaagctcgtaaaggaatatcccaaaagtccaccaa 19357587
Query: 631 tcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtg 686
|| || || |||||||| || ||||||||||||||||| ||||||| |||||||||
Sbjct: 19357588 tccactgcactgccatgcccttcgcctttgatgatctctggggccaagtactcgtg 19357643
Score = 60.0 bits (30), Expect = 6e-007
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 379 gcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtag 438
||||||||||| || |||||||| ||||| ||||| ||||| || ||||||||||| ||
Sbjct: 22657423 gcccaattcactccttcaaagaaaggatgttgctttatctctgttgctccacgcttataa 22657482
Query: 439 gccagccgttgctggggctccttcacaagcagacccctgatcagatccct 488
|| | | || || |||||||||||||||| || ||| |||| ||||||
Sbjct: 22657483 gctaatctatgttgtggctccttcacaagcaaactccttatcaaatccct 22657532
Score = 44.1 bits (22), Expect = 0.034
Identities = 70/86 (81%)
Strand = Plus / Plus
Query: 619 aaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccagg 678
||||||||||| || || || || ||||| || || |||||||||||||| || || | |
Sbjct: 22657663 aaggtccaccaatcaactgcacttccatgtccttcacctttgatgatctctggagctaag 22657722
Query: 679 tactcgtgcgtcccaacgaacgacat 704
|||||||| || ||||| || |||||
Sbjct: 22657723 tactcgtgtgtgccaacaaaagacat 22657748
>emb|AX507823.1| Sequence 2518 from Patent WO0216655
Length = 1737
Score = 75.8 bits (38), Expect = 1e-011
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 609 gaataccccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctc 668
||||| |||||| ||||||||||| || ||||| ||||| || || |||||||| |||||
Sbjct: 1335 gaatatcccgaatgtccaccagtcaaccgcgcttccatgaccttctcctttgataatctc 1276
Query: 669 gggggccaggtactcgtgcgtcccaacgaacgacatcgaccgtgcg 714
|| || ||||||||||| || ||||| |||||||| |||| ||||
Sbjct: 1275 tggtgctaggtactcgtgtgtaccaacaaacgacattgaccttgcg 1230
>gb|BT010571.1| Arabidopsis thaliana At3g27580 gene, complete cds
Length = 1737
Score = 75.8 bits (38), Expect = 1e-011
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 609 gaataccccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctc 668
||||| |||||| ||||||||||| || ||||| ||||| || || |||||||| |||||
Sbjct: 1335 gaatatcccgaatgtccaccagtcaaccgcgcttccatgaccttctcctttgataatctc 1276
Query: 669 gggggccaggtactcgtgcgtcccaacgaacgacatcgaccgtgcg 714
|| || ||||||||||| || ||||| |||||||| |||| ||||
Sbjct: 1275 tggtgctaggtactcgtgtgtaccaacaaacgacattgaccttgcg 1230
>dbj|D10910.1|ATHATPK Arabidopsis thaliana Atpk7 gene for serine/threonine protein kinase,
complete cds
Length = 4719
Score = 75.8 bits (38), Expect = 1e-011
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 609 gaataccccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctc 668
||||| |||||| ||||||||||| || ||||| ||||| || || |||||||| |||||
Sbjct: 2872 gaatatcccgaatgtccaccagtcaaccgcgcttccatgaccttctcctttgataatctc 2813
Query: 669 gggggccaggtactcgtgcgtcccaacgaacgacatcgaccgtgcg 714
|| || ||||||||||| || ||||| |||||||| |||| ||||
Sbjct: 2812 tggtgctaggtactcgtgtgtaccaacaaacgacattgaccttgcg 2767
>dbj|AB025626.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MMJ24
Length = 54452
Score = 75.8 bits (38), Expect = 1e-011
Identities = 89/106 (83%)
Strand = Plus / Plus
Query: 609 gaataccccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctc 668
||||| |||||| ||||||||||| || ||||| ||||| || || |||||||| |||||
Sbjct: 47386 gaatatcccgaatgtccaccagtcaaccgcgcttccatgaccttctcctttgataatctc 47445
Query: 669 gggggccaggtactcgtgcgtcccaacgaacgacatcgaccgtgcg 714
|| || ||||||||||| || ||||| |||||||| |||| ||||
Sbjct: 47446 tggtgctaggtactcgtgtgtaccaacaaacgacattgaccttgcg 47491
>dbj|AK175529.1| Arabidopsis thaliana mRNA for serine/threonine-protein kinase PK7,
complete cds, clone: RAFL21-94-N11
Length = 2124
Score = 75.8 bits (38), Expect = 1e-011
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 609 gaataccccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctc 668
||||| |||||| ||||||||||| || ||||| ||||| || || |||||||| |||||
Sbjct: 1520 gaatatcccgaatgtccaccagtcaaccgcgcttccatgaccttctcctttgataatctc 1461
Query: 669 gggggccaggtactcgtgcgtcccaacgaacgacatcgaccgtgcg 714
|| || ||||||||||| || ||||| |||||||| |||| ||||
Sbjct: 1460 tggtgctaggtactcgtgtgtaccaacaaacgacattgaccttgcg 1415
>dbj|AK176399.1| Arabidopsis thaliana mRNA for serine/threonine-protein kinase, PK7,
complete cds, clone: RAFL24-11-A01
Length = 2483
Score = 75.8 bits (38), Expect = 1e-011
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 609 gaataccccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctc 668
||||| |||||| ||||||||||| || ||||| ||||| || || |||||||| |||||
Sbjct: 1827 gaatatcccgaatgtccaccagtcaaccgcgcttccatgaccttctcctttgataatctc 1768
Query: 669 gggggccaggtactcgtgcgtcccaacgaacgacatcgaccgtgcg 714
|| || ||||||||||| || ||||| |||||||| |||| ||||
Sbjct: 1767 tggtgctaggtactcgtgtgtaccaacaaacgacattgaccttgcg 1722
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 75.8 bits (38), Expect = 1e-011
Identities = 89/106 (83%)
Strand = Plus / Plus
Query: 609 gaataccccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctc 668
||||| |||||| ||||||||||| || ||||| ||||| || || |||||||| |||||
Sbjct: 10152043 gaatatcccgaatgtccaccagtcaaccgcgcttccatgaccttctcctttgataatctc 10152102
Query: 669 gggggccaggtactcgtgcgtcccaacgaacgacatcgaccgtgcg 714
|| || ||||||||||| || ||||| |||||||| |||| ||||
Sbjct: 10152103 tggtgctaggtactcgtgtgtaccaacaaacgacattgaccttgcg 10152148
Score = 60.0 bits (30), Expect = 6e-007
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 613 accccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggg 672
|||||||| ||||||||||| || || |||||| || || |||||||||||||| |||
Sbjct: 19575098 accccgaaagtccaccagtcaactgcagcgccatgtccttctcctttgatgatctctggg 19575039
Query: 673 gccaggtactcgtg 686
|| |||||||||||
Sbjct: 19575038 gctaggtactcgtg 19575025
Score = 56.0 bits (28), Expect = 9e-006
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 615 cccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggc 674
|||||| ||||||||||| || ||||||||||| |||||||| |||||||| || ||
Sbjct: 4026931 cccgaatgtccaccagtccacagcgctgccatgtccctcgccacgtatgatctctggagc 4026990
Query: 675 caggtactcgtg 686
|||||||||||
Sbjct: 4026991 taggtactcgtg 4027002
Score = 46.1 bits (23), Expect = 0.009
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 664 atctcgggggccaggtactcgtgcgtcccaacgaacgacatcgaccg 710
||||| || |||| |||||| |||||||||||||| ||||| |||||
Sbjct: 16152838 atctcaggagccaagtactcatgcgtcccaacgaatgacatggaccg 16152884
>ref|NM_113674.2| Arabidopsis thaliana ATPK7; kinase AT3G27580 (ATPK7) transcript
variant AT3G27580.1 mRNA, complete cds
Length = 1737
Score = 75.8 bits (38), Expect = 1e-011
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 609 gaataccccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctc 668
||||| |||||| ||||||||||| || ||||| ||||| || || |||||||| |||||
Sbjct: 1335 gaatatcccgaatgtccaccagtcaaccgcgcttccatgaccttctcctttgataatctc 1276
Query: 669 gggggccaggtactcgtgcgtcccaacgaacgacatcgaccgtgcg 714
|| || ||||||||||| || ||||| |||||||| |||| ||||
Sbjct: 1275 tggtgctaggtactcgtgtgtaccaacaaacgacattgaccttgcg 1230
>ref|NM_001035707.1| Arabidopsis thaliana ATPK7; kinase AT3G27580 (ATPK7) transcript
variant AT3G27580.2 mRNA, complete cds
Length = 2473
Score = 75.8 bits (38), Expect = 1e-011
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 609 gaataccccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctc 668
||||| |||||| ||||||||||| || ||||| ||||| || || |||||||| |||||
Sbjct: 1827 gaatatcccgaatgtccaccagtcaaccgcgcttccatgaccttctcctttgataatctc 1768
Query: 669 gggggccaggtactcgtgcgtcccaacgaacgacatcgaccgtgcg 714
|| || ||||||||||| || ||||| |||||||| |||| ||||
Sbjct: 1767 tggtgctaggtactcgtgtgtaccaacaaacgacattgaccttgcg 1722
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 75.8 bits (38), Expect = 1e-011
Identities = 89/106 (83%)
Strand = Plus / Plus
Query: 609 gaataccccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctc 668
||||| |||||| ||||||||||| || ||||| ||||| || || |||||||| |||||
Sbjct: 10219310 gaatatcccgaatgtccaccagtcaaccgcgcttccatgaccttctcctttgataatctc 10219369
Query: 669 gggggccaggtactcgtgcgtcccaacgaacgacatcgaccgtgcg 714
|| || ||||||||||| || ||||| |||||||| |||| ||||
Sbjct: 10219370 tggtgctaggtactcgtgtgtaccaacaaacgacattgaccttgcg 10219415
Score = 60.0 bits (30), Expect = 6e-007
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 613 accccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggg 672
|||||||| ||||||||||| || || |||||| || || |||||||||||||| |||
Sbjct: 19622625 accccgaaagtccaccagtcaactgcagcgccatgtccttctcctttgatgatctctggg 19622566
Query: 673 gccaggtactcgtg 686
|| |||||||||||
Sbjct: 19622565 gctaggtactcgtg 19622552
Score = 56.0 bits (28), Expect = 9e-006
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 615 cccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggc 674
|||||| ||||||||||| || ||||||||||| |||||||| |||||||| || ||
Sbjct: 4031029 cccgaatgtccaccagtccacagcgctgccatgtccctcgccacgtatgatctctggagc 4031088
Query: 675 caggtactcgtg 686
|||||||||||
Sbjct: 4031089 taggtactcgtg 4031100
Score = 46.1 bits (23), Expect = 0.009
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 664 atctcgggggccaggtactcgtgcgtcccaacgaacgacatcgaccg 710
||||| || |||| |||||| |||||||||||||| ||||| |||||
Sbjct: 16199785 atctcaggagccaagtactcatgcgtcccaacgaatgacatggaccg 16199831
>gb|CF772922.1|CF772922 AG_FSL_10A06 Arabidopsis ag-1 35S:AG-GR forward subtraction library
Arabidopsis thaliana cDNA clone 10A06, mRNA sequence
Length = 485
Score = 67.9 bits (34), Expect = 2e-009
Identities = 88/106 (83%)
Strand = Plus / Plus
Query: 571 cccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccag 630
|||||||| ||||| |||| || || |||||||| | ||||| ||| || ||||||||
Sbjct: 377 cccttgaagggcgttctcccaaagagaagctcgtaaaggaatatcccaaaagtccaccaa 436
Query: 631 tcgacggcgctgccatggccctcgcctttgatgatctcgggggcca 676
|| || || |||||||| || ||||||||||||||||| |||||||
Sbjct: 437 tccactgcactgccatgcccttcgcctttgatgatctctggggcca 482
>ref|NM_124148.2| Arabidopsis thaliana unknown protein AT5G47740 mRNA, complete cds
Length = 1639
Score = 67.9 bits (34), Expect = 2e-009
Identities = 88/106 (83%)
Strand = Plus / Plus
Query: 571 cccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccag 630
|||||||| ||||| |||| || || |||||||| | ||||| ||| || ||||||||
Sbjct: 1531 cccttgaagggcgttctcccaaagagaagctcgtaaaggaatatcccaaaagtccaccaa 1590
Query: 631 tcgacggcgctgccatggccctcgcctttgatgatctcgggggcca 676
|| || || |||||||| || ||||||||||||||||| |||||||
Sbjct: 1591 tccactgcactgccatgcccttcgcctttgatgatctctggggcca 1636
>gb|BP633987.1|BP633987 BP633987 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-32-N02 3',
mRNA sequence
Length = 435
Score = 63.9 bits (32), Expect = 4e-008
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 379 gcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgctt 434
||||||||||| || |||||||| ||||| ||||| ||||| ||||||||||||||
Sbjct: 311 gcccaattcactccttcaaagaaaggatgttgctttatctctgtggctccacgctt 366
>gb|B29006.1|B29006 T23M18TR TAMU Arabidopsis thaliana genomic clone T23M18, DNA
sequence
Length = 556
Score = 60.0 bits (30), Expect = 6e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 379 gcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctcc 428
||||||||||| || |||||||| ||||||||||| |||||||| |||||
Sbjct: 197 gcccaattcacaccttcaaagaatggatgctgctttatctccgttgctcc 246
Score = 54.0 bits (27), Expect = 3e-005
Identities = 75/91 (82%)
Strand = Plus / Plus
Query: 622 gtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtac 681
|||||||| || || ||||| ||||| || || |||||||||||||| || || | ||||
Sbjct: 440 gtccaccaatccactgcgcttccatgtccttctcctttgatgatctctggagctaagtac 499
Query: 682 tcgtgcgtcccaacgaacgacatcgaccgtg 712
||||| || ||||| || ||||| |||||||
Sbjct: 500 tcgtgggttccaacaaaggacatggaccgtg 530
>gb|B29138.1|B29138 T27C20TF TAMU Arabidopsis thaliana genomic clone T27C20, DNA
sequence
Length = 352
Score = 60.0 bits (30), Expect = 6e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 379 gcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctcc 428
||||||||||| || |||||||| ||||||||||| |||||||| |||||
Sbjct: 197 gcccaattcacaccttcaaagaatggatgctgctttatctccgttgctcc 246
>gb|B78430.1|B78430 T27C20TF.1 TAMU Arabidopsis thaliana genomic clone T27C20, DNA
sequence
Length = 496
Score = 60.0 bits (30), Expect = 6e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 379 gcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctcc 428
||||||||||| || |||||||| ||||||||||| |||||||| |||||
Sbjct: 190 gcccaattcacaccttcaaagaatggatgctgctttatctccgttgctcc 239
>gb|BZ660643.1|BZ660643 SALK_024096.46.25.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_024096.46.25.x,
DNA sequence
Length = 397
Score = 60.0 bits (30), Expect = 6e-007
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 613 accccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggg 672
|||||||| ||||||||||| || || |||||| || || |||||||||||||| |||
Sbjct: 297 accccgaaagtccaccagtcaactgcagcgccatgtccttctcctttgatgatctctggg 238
Query: 673 gccaggtactcgtg 686
|| |||||||||||
Sbjct: 237 gctaggtactcgtg 224
>gb|AA042649.1|AA042649 24945 CD4-13 Arabidopsis thaliana cDNA clone E7G10T7, mRNA sequence
Length = 487
Score = 60.0 bits (30), Expect = 6e-007
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 379 gcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtag 438
||||||||||| || |||||||| ||||| ||||| ||||| || || |||||||| ||
Sbjct: 199 gcccaattcactccttcaaagaaaggatgttgcttcatctcagttgcaccacgcttatac 258
Query: 439 gccagccgttgctggggctccttcacaagcagacccctgatcagatccct 488
|| | | ||||| ||||| ||||||||||||| ||| |||| ||||||
Sbjct: 259 gctaatctatgctgaggctctttcacaagcagactcctaatcaaatccct 308
>gb|AI996119.1|AI996119 701550103 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701550103, mRNA sequence
Length = 408
Score = 60.0 bits (30), Expect = 6e-007
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 379 gcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtag 438
||||||||||| || |||||||| ||||| ||||| ||||| || || |||||||| ||
Sbjct: 238 gcccaattcactccttcaaagaaaggatgttgcttcatctcagttgcaccacgcttatac 297
Query: 439 gccagccgttgctggggctccttcacaagcagacccctgatcagatccct 488
|| | | ||||| ||||| ||||||||||||| ||| |||| ||||||
Sbjct: 298 gctaatctatgctgaggctctttcacaagcagactcctaatcaaatccct 347
>gb|AV782741.1|AV782741 AV782741 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-20-P16 3',
mRNA sequence
Length = 629
Score = 60.0 bits (30), Expect = 6e-007
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 613 accccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggg 672
|||||||| ||||||||||| || || |||||| || || |||||||||||||| |||
Sbjct: 475 accccgaaagtccaccagtcaactgcagcgccatgtccttctcctttgatgatctctggg 534
Query: 673 gccaggtactcgtg 686
|| |||||||||||
Sbjct: 535 gctaggtactcgtg 548
>gb|AV788423.1|AV788423 AV788423 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-79-H24 3',
mRNA sequence
Length = 418
Score = 60.0 bits (30), Expect = 6e-007
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 379 gcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtag 438
||||||||||| || |||||||| ||||| ||||| ||||| || || |||||||| ||
Sbjct: 268 gcccaattcactccttcaaagaaaggatgttgcttcatctcagttgcaccacgcttatac 327
Query: 439 gccagccgttgctggggctccttcacaagcagacccctgatcagatccct 488
|| | | ||||| ||||| ||||||||||||| ||| |||| ||||||
Sbjct: 328 gctaatctatgctgaggctctttcacaagcagactcctaatcaaatccct 377
>gb|CB260202.1|CB260202 86-E9535-013-002-K21-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770K212Q 5-PRIME, mRNA sequence
Length = 680
Score = 60.0 bits (30), Expect = 6e-007
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 379 gcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctcc 428
||||||||||| || |||||||| ||||||||||| |||||||| |||||
Sbjct: 534 gcccaattcacaccttcaaagaatggatgctgctttatctccgttgctcc 485
Score = 54.0 bits (27), Expect = 3e-005
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 622 gtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtac 681
|||||||| || || ||||| ||||| || || |||||||||||||| || || | ||||
Sbjct: 291 gtccaccaatccactgcgcttccatgtccttctcctttgatgatctctggagctaagtac 232
Query: 682 tcgtgcgtcccaacgaacgacatcgaccgtg 712
||||| || ||||| || ||||| |||||||
Sbjct: 231 tcgtgggttccaacaaaggacatggaccgtg 201
>gb|AV522980.1|AV522980 AV522980 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL11f10F 3', mRNA
sequence
Length = 605
Score = 60.0 bits (30), Expect = 6e-007
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 613 accccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggg 672
|||||||| ||||||||||| || || |||||| || || |||||||||||||| |||
Sbjct: 424 accccgaaagtccaccagtcaactgcagcgccatgtccttctcctttgatgatctctggg 483
Query: 673 gccaggtactcgtg 686
|| |||||||||||
Sbjct: 484 gctaggtactcgtg 497
>gb|AV523248.1|AV523248 AV523248 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL21f03F 3', mRNA
sequence
Length = 623
Score = 60.0 bits (30), Expect = 6e-007
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 613 accccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggg 672
|||||||| ||||||||||| || || |||||| || || |||||||||||||| |||
Sbjct: 424 accccgaaagtccaccagtcaactgcagcgccatgtccttctcctttgatgatctctggg 483
Query: 673 gccaggtactcgtg 686
|| |||||||||||
Sbjct: 484 gctaggtactcgtg 497
>gb|AV523791.1|AV523791 AV523791 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL40c01F 3', mRNA
sequence
Length = 601
Score = 60.0 bits (30), Expect = 6e-007
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 613 accccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggg 672
|||||||| ||||||||||| || || |||||| || || |||||||||||||| |||
Sbjct: 423 accccgaaagtccaccagtcaactgcagcgccatgtccttctcctttgatgatctctggg 482
Query: 673 gccaggtactcgtg 686
|| |||||||||||
Sbjct: 483 gctaggtactcgtg 496
>gb|AV565592.1|AV565592 AV565592 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ227b10F 3', mRNA sequence
Length = 488
Score = 60.0 bits (30), Expect = 6e-007
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 379 gcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtag 438
||||||||||| || |||||||| ||||| ||||| ||||| || ||||||||||| ||
Sbjct: 352 gcccaattcactccttcaaagaaaggatgttgctttatctctgttgctccacgcttataa 411
Query: 439 gccagccgttgctggggctccttcacaagcagacccctgatcagatccct 488
|| | | || || |||||||||||||||| || ||| |||| ||||||
Sbjct: 412 gctaatctatgttgtggctccttcacaagcaaactccttatcaaatccct 461
>gb|BP585593.1|BP585593 BP585593 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-03-C09 3',
mRNA sequence
Length = 449
Score = 60.0 bits (30), Expect = 6e-007
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 379 gcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtag 438
||||||||||| || |||||||| ||||| ||||| ||||| || || |||||||| ||
Sbjct: 232 gcccaattcactccttcaaagaaaggatgttgcttcatctcagttgcaccacgcttatac 291
Query: 439 gccagccgttgctggggctccttcacaagcagacccctgatcagatccct 488
|| | | ||||| ||||| ||||||||||||| ||| |||| ||||||
Sbjct: 292 gctaatctatgctgaggctctttcacaagcagactcctaatcaaatccct 341
>gb|BP610162.1|BP610162 BP610162 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-10-D20 3',
mRNA sequence
Length = 443
Score = 60.0 bits (30), Expect = 6e-007
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 379 gcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtag 438
||||||||||| || |||||||| ||||| ||||| ||||| || ||||||||||| ||
Sbjct: 209 gcccaattcactccttcaaagaaaggatgttgctttatctctgttgctccacgcttataa 268
Query: 439 gccagccgttgctggggctccttcacaagcagacccctgatcagatccct 488
|| | | || || |||||||||||||||| || ||| |||| ||||||
Sbjct: 269 gctaatctatgttgtggctccttcacaagcaaactccttatcaaatccct 318
>gb|BP611242.1|BP611242 BP611242 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-85-B05 3',
mRNA sequence
Length = 463
Score = 60.0 bits (30), Expect = 6e-007
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 379 gcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtag 438
||||||||||| || |||||||| ||||| ||||| ||||| || ||||||||||| ||
Sbjct: 311 gcccaattcactccttcaaagaaaggatgttgctttatctctgttgctccacgcttataa 370
Query: 439 gccagccgttgctggggctccttcacaagcagacccctgatcagatccct 488
|| | | || || |||||||||||||||| || ||| |||| ||||||
Sbjct: 371 gctaatctatgttgtggctccttcacaagcaaactccttatcaaatccct 420
>gb|BP618438.1|BP618438 BP618438 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-28-E19 3',
mRNA sequence
Length = 452
Score = 60.0 bits (30), Expect = 6e-007
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 379 gcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtag 438
||||||||||| || |||||||| ||||| ||||| ||||| || ||||||||||| ||
Sbjct: 209 gcccaattcactccttcaaagaaaggatgttgctttatctctgttgctccacgcttataa 268
Query: 439 gccagccgttgctggggctccttcacaagcagacccctgatcagatccct 488
|| | | || || |||||||||||||||| || ||| |||| ||||||
Sbjct: 269 gctaatctatgttgtggctccttcacaagcaaactccttatcaaatccct 318
>gb|AF236104.1|AF236104 Arabidopsis thaliana protein kinase KIPK mRNA, complete cds
Length = 2522
Score = 60.0 bits (30), Expect = 6e-007
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 613 accccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggg 672
|||||||| ||||||||||| || || |||||| || || |||||||||||||| |||
Sbjct: 1979 accccgaaagtccaccagtcaactgcagcgccatgtccttctcctttgatgatctctggg 1920
Query: 673 gccaggtactcgtg 686
|| |||||||||||
Sbjct: 1919 gctaggtactcgtg 1906
>gb|AY078927.1| Arabidopsis thaliana At2g44830/T13E15.16 mRNA, complete cds
Length = 2369
Score = 60.0 bits (30), Expect = 6e-007
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 379 gcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctcc 428
||||||||||| || |||||||| ||||||||||| |||||||| |||||
Sbjct: 2142 gcccaattcacaccttcaaagaatggatgctgctttatctccgttgctcc 2093
Score = 54.0 bits (27), Expect = 3e-005
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 622 gtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtac 681
|||||||| || || ||||| ||||| || || |||||||||||||| || || | ||||
Sbjct: 1899 gtccaccaatccactgcgcttccatgtccttctcctttgatgatctctggagctaagtac 1840
Query: 682 tcgtgcgtcccaacgaacgacatcgaccgtg 712
||||| || ||||| || ||||| |||||||
Sbjct: 1839 tcgtgggttccaacaaaggacatggaccgtg 1809
>gb|AY124003.1| Arabidopsis thaliana AT3g52890/F8J2_60 mRNA, complete cds
Length = 3174
Score = 60.0 bits (30), Expect = 6e-007
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 613 accccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggg 672
|||||||| ||||||||||| || || |||||| || || |||||||||||||| |||
Sbjct: 2700 accccgaaagtccaccagtcaactgcagcgccatgtccttctcctttgatgatctctggg 2641
Query: 673 gccaggtactcgtg 686
|| |||||||||||
Sbjct: 2640 gctaggtactcgtg 2627
>gb|AY063923.1| Arabidopsis thaliana putative protein kinase (At4g26610) mRNA,
complete cds
Length = 1960
Score = 60.0 bits (30), Expect = 6e-007
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 379 gcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtag 438
||||||||||| || |||||||| ||||| ||||| ||||| || || |||||||| ||
Sbjct: 1677 gcccaattcactccttcaaagaaaggatgttgcttcatctcagttgcaccacgcttatac 1618
Query: 439 gccagccgttgctggggctccttcacaagcagacccctgatcagatccct 488
|| | | ||||| ||||| ||||||||||||| ||| |||| ||||||
Sbjct: 1617 gctaatctatgctgaggctctttcacaagcagactcctaatcaaatccct 1568
>gb|AY091248.1| Arabidopsis thaliana putative protein kinase (At4g26610) mRNA,
complete cds
Length = 1552
Score = 60.0 bits (30), Expect = 6e-007
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 379 gcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtag 438
||||||||||| || |||||||| ||||| ||||| ||||| || || |||||||| ||
Sbjct: 1385 gcccaattcactccttcaaagaaaggatgttgcttcatctcagttgcaccacgcttatac 1326
Query: 439 gccagccgttgctggggctccttcacaagcagacccctgatcagatccct 488
|| | | ||||| ||||| ||||||||||||| ||| |||| ||||||
Sbjct: 1325 gctaatctatgctgaggctctttcacaagcagactcctaatcaaatccct 1276
>emb|AX506135.1| Sequence 830 from Patent WO0216655
Length = 1497
Score = 60.0 bits (30), Expect = 6e-007
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 379 gcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtag 438
||||||||||| || |||||||| ||||| ||||| ||||| || ||||||||||| ||
Sbjct: 1355 gcccaattcactccttcaaagaaaggatgttgctttatctctgttgctccacgcttataa 1296
Query: 439 gccagccgttgctggggctccttcacaagcagacccctgatcagatccct 488
|| | | || || |||||||||||||||| || ||| |||| ||||||
Sbjct: 1295 gctaatctatgttgtggctccttcacaagcaaactccttatcaaatccct 1246
Score = 44.1 bits (22), Expect = 0.034
Identities = 70/86 (81%)
Strand = Plus / Minus
Query: 619 aaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccagg 678
||||||||||| || || || || ||||| || || |||||||||||||| || || | |
Sbjct: 1115 aaggtccaccaatcaactgcacttccatgtccttcacctttgatgatctctggagctaag 1056
Query: 679 tactcgtgcgtcccaacgaacgacat 704
|||||||| || ||||| || |||||
Sbjct: 1055 tactcgtgtgtgccaacaaaagacat 1030
>gb|BT001910.1| Arabidopsis thaliana clone C105065 putative protein kinase
(At3g52890) mRNA, complete cds
Length = 2836
Score = 60.0 bits (30), Expect = 6e-007
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 613 accccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggg 672
|||||||| ||||||||||| || || |||||| || || |||||||||||||| |||
Sbjct: 2420 accccgaaagtccaccagtcaactgcagcgccatgtccttctcctttgatgatctctggg 2361
Query: 673 gccaggtactcgtg 686
|| |||||||||||
Sbjct: 2360 gctaggtactcgtg 2347
>gb|BT002286.1| Arabidopsis thaliana At3g52890/F8J2_60 mRNA, complete cds
Length = 2805
Score = 60.0 bits (30), Expect = 6e-007
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 613 accccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggg 672
|||||||| ||||||||||| || || |||||| || || |||||||||||||| |||
Sbjct: 2420 accccgaaagtccaccagtcaactgcagcgccatgtccttctcctttgatgatctctggg 2361
Query: 673 gccaggtactcgtg 686
|| |||||||||||
Sbjct: 2360 gctaggtactcgtg 2347
>gb|AC002986.1|YUP8H12R Arabidopsis thaliana chromosome 1 YAC YUP8H12R sequence, complete
sequence
Length = 181925
Score = 60.0 bits (30), Expect = 6e-007
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 376 agcgcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttg 435
|||||||||||||| || || || || ||||||||||| |||||||| |||||||| |||
Sbjct: 49070 agcgcccaattcacaccttcgaaaaacggatgctgcttaatctccgtcgctccacgtttg 49011
Query: 436 ta 437
||
Sbjct: 49010 ta 49009
>gb|AC002388.3| Arabidopsis thaliana chromosome 2 clone T13E15 map m336, complete
sequence
Length = 85534
Score = 60.0 bits (30), Expect = 6e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 379 gcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctcc 428
||||||||||| || |||||||| ||||||||||| |||||||| |||||
Sbjct: 60871 gcccaattcacaccttcaaagaatggatgctgctttatctccgttgctcc 60920
Score = 54.0 bits (27), Expect = 3e-005
Identities = 75/91 (82%)
Strand = Plus / Plus
Query: 622 gtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtac 681
|||||||| || || ||||| ||||| || || |||||||||||||| || || | ||||
Sbjct: 61114 gtccaccaatccactgcgcttccatgtccttctcctttgatgatctctggagctaagtac 61173
Query: 682 tcgtgcgtcccaacgaacgacatcgaccgtg 712
||||| || ||||| || ||||| |||||||
Sbjct: 61174 tcgtgggttccaacaaaggacatggaccgtg 61204
>emb|BX833587.1|CNS0A0GL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL64ZD04 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 666
Score = 60.0 bits (30), Expect = 6e-007
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 379 gcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtag 438
||||||||||| || |||||||| ||||| ||||| ||||| || ||||||||||| ||
Sbjct: 315 gcccaattcactccttcaaagaaaggatgttgctttatctctgttgctccacgcttataa 256
Query: 439 gccagccgttgctggggctccttcacaagcagacccctgatcagatccct 488
|| | | || || |||||||||||||||| || ||| |||| ||||||
Sbjct: 255 gctaatctatgttgtggctccttcacaagcaaactccttatcaaatccct 206
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 312,913
Number of Sequences: 1013581
Number of extensions: 312913
Number of successful extensions: 26004
Number of sequences better than 0.5: 114
Number of HSP's better than 0.5 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 23392
Number of HSP's gapped (non-prelim): 2593
length of query: 735
length of database: 908,940,872
effective HSP length: 20
effective length of query: 715
effective length of database: 888,669,252
effective search space: 635398515180
effective search space used: 635398515180
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)