BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2576612.2.1
(845 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE039272.1|BE039272 AC01D03 AC Arabidopsis thaliana cDNA... 161 2e-037
gb|AV826432.1|AV826432 AV826432 RAFL8 Arabidopsis thaliana ... 161 2e-037
gb|AV537607.1|AV537607 AV537607 Arabidopsis thaliana roots ... 161 2e-037
gb|AV544220.1|AV544220 AV544220 Arabidopsis thaliana roots ... 161 2e-037
gb|AV549585.1|AV549585 AV549585 Arabidopsis thaliana roots ... 161 2e-037
gb|AY050966.1| Arabidopsis thaliana putative ribosomal prot... 161 2e-037
gb|AY096616.1| Arabidopsis thaliana putative ribosomal prot... 161 2e-037
gb|AY085630.1| Arabidopsis thaliana clone 164 mRNA, complet... 161 2e-037
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 161 2e-037
emb|AL391712.1|ATT5E8 Arabidopsis thaliana DNA chromosome 5... 161 2e-037
ref|NM_120988.2| Arabidopsis thaliana structural constituen... 161 2e-037
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 161 2e-037
gb|BE037545.1|BE037545 AA01A06 AA Arabidopsis thaliana cDNA... 159 9e-037
gb|BE038613.1|BE038613 AB01H05 AB Arabidopsis thaliana cDNA... 159 9e-037
gb|BE038827.1|BE038827 AB04G03 AB Arabidopsis thaliana cDNA... 159 9e-037
gb|AV784120.1|AV784120 AV784120 RAFL5 Arabidopsis thaliana ... 159 9e-037
gb|AV823191.1|AV823191 AV823191 RAFL5 Arabidopsis thaliana ... 159 9e-037
gb|CA781266.1|CA781266 014B04AF Infected Arabidopsis Leaf A... 159 9e-037
gb|AV532062.1|AV532062 AV532062 Arabidopsis thaliana flower... 159 9e-037
gb|AV535553.1|AV535553 AV535553 Arabidopsis thaliana flower... 159 9e-037
gb|AV538084.1|AV538084 AV538084 Arabidopsis thaliana roots ... 159 9e-037
gb|AV538711.1|AV538711 AV538711 Arabidopsis thaliana roots ... 159 9e-037
gb|AV544758.1|AV544758 AV544758 Arabidopsis thaliana roots ... 159 9e-037
gb|AV553255.1|AV553255 AV553255 Arabidopsis thaliana roots ... 159 9e-037
gb|AV565619.1|AV565619 AV565619 Arabidopsis thaliana green ... 159 9e-037
gb|BP566550.1|BP566550 BP566550 RAFL14 Arabidopsis thaliana... 159 9e-037
gb|BP582590.1|BP582590 BP582590 RAFL14 Arabidopsis thaliana... 159 9e-037
gb|BP592451.1|BP592451 BP592451 RAFL15 Arabidopsis thaliana... 159 9e-037
gb|BP619574.1|BP619574 BP619574 RAFL16 Arabidopsis thaliana... 159 9e-037
gb|BP632732.1|BP632732 BP632732 RAFL17 Arabidopsis thaliana... 159 9e-037
gb|BP663835.1|BP663835 BP663835 RAFL21 Arabidopsis thaliana... 159 9e-037
gb|AY048221.1| Arabidopsis thaliana At1g04270/F19P19_29 mRN... 159 9e-037
gb|AY091703.1| Arabidopsis thaliana At1g04270/F19P19_29 mRN... 159 9e-037
emb|BX817406.1|CNS0ACK0 Arabidopsis thaliana Full-length cD... 159 9e-037
emb|Z23161.1|ATRBPS15A A.thaliana ribosomal protein S15 mRN... 159 9e-037
emb|X91962.1|AT40SRS15 A.thaliana mRNA for 40S ribosomal pr... 159 9e-037
ref|NM_100308.2| Arabidopsis thaliana RPS15 (RIBOSOMAL PROT... 159 9e-037
gb|AV530843.1|AV530843 AV530843 Arabidopsis thaliana flower... 157 4e-036
gb|BP563336.1|BP563336 BP563336 RAFL14 Arabidopsis thaliana... 157 4e-036
gb|BP571507.1|BP571507 BP571507 RAFL14 Arabidopsis thaliana... 157 4e-036
gb|BP584508.1|BP584508 BP584508 RAFL14 Arabidopsis thaliana... 157 4e-036
gb|BP593823.1|BP593823 BP593823 RAFL15 Arabidopsis thaliana... 157 4e-036
gb|BP595618.1|BP595618 BP595618 RAFL15 Arabidopsis thaliana... 157 4e-036
gb|BP597545.1|BP597545 BP597545 RAFL15 Arabidopsis thaliana... 157 4e-036
gb|BP607962.1|BP607962 BP607962 RAFL16 Arabidopsis thaliana... 157 4e-036
gb|BP638304.1|BP638304 BP638304 RAFL19 Arabidopsis thaliana... 157 4e-036
gb|BP787497.1|BP787497 BP787497 RAFL7 Arabidopsis thaliana ... 157 4e-036
gb|BP789183.1|BP789183 BP789183 RAFL7 Arabidopsis thaliana ... 157 4e-036
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 157 4e-036
gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsi... 157 4e-036
emb|Z23162.1|ATRBPS15B A.thaliana H1flk-3 gene, 3' end, and... 157 4e-036
ref|NM_001035879.1| Arabidopsis thaliana RPS15 (RIBOSOMAL P... 157 4e-036
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 157 4e-036
gb|AA597749.1|AA597749 29333 Lambda-PRL2 Arabidopsis thalia... 155 1e-035
gb|T21856.1|T21856 3864 Lambda-PRL2 Arabidopsis thaliana cD... 155 1e-035
gb|AV553671.1|AV553671 AV553671 Arabidopsis thaliana roots ... 155 1e-035
gb|BP564615.1|BP564615 BP564615 RAFL14 Arabidopsis thaliana... 155 1e-035
gb|BP570282.1|BP570282 BP570282 RAFL14 Arabidopsis thaliana... 155 1e-035
gb|BP638880.1|BP638880 BP638880 RAFL19 Arabidopsis thaliana... 155 1e-035
gb|BP644028.1|BP644028 BP644028 RAFL19 Arabidopsis thaliana... 155 1e-035
gb|AA712740.1|AA712740 32299 Lambda-PRL2 Arabidopsis thalia... 153 6e-035
gb|AV814593.1|AV814593 AV814593 RAFL9 Arabidopsis thaliana ... 153 6e-035
gb|BP594448.1|BP594448 BP594448 RAFL15 Arabidopsis thaliana... 153 6e-035
gb|BP671919.1|BP671919 BP671919 RAFL21 Arabidopsis thaliana... 153 6e-035
gb|AV545466.1|AV545466 AV545466 Arabidopsis thaliana roots ... 151 2e-034
gb|BP642920.1|BP642920 BP642920 RAFL19 Arabidopsis thaliana... 151 2e-034
gb|BP583991.1|BP583991 BP583991 RAFL14 Arabidopsis thaliana... 149 9e-034
gb|BP566825.1|BP566825 BP566825 RAFL14 Arabidopsis thaliana... 147 4e-033
gb|BP648711.1|BP648711 BP648711 RAFL19 Arabidopsis thaliana... 147 4e-033
gb|BP651032.1|BP651032 BP651032 RAFL19 Arabidopsis thaliana... 147 4e-033
gb|AV790069.1|AV790069 AV790069 RAFL6 Arabidopsis thaliana ... 145 1e-032
gb|BP624306.1|BP624306 BP624306 RAFL17 Arabidopsis thaliana... 145 1e-032
gb|BP632135.1|BP632135 BP632135 RAFL17 Arabidopsis thaliana... 145 1e-032
gb|BP646287.1|BP646287 BP646287 RAFL19 Arabidopsis thaliana... 145 1e-032
gb|BE038861.1|BE038861 AB05B09 AB Arabidopsis thaliana cDNA... 143 6e-032
gb|AV536604.1|AV536604 AV536604 Arabidopsis thaliana liquid... 143 6e-032
gb|BP618355.1|BP618355 BP618355 RAFL16 Arabidopsis thaliana... 143 6e-032
gb|BP623778.1|BP623778 BP623778 RAFL17 Arabidopsis thaliana... 143 6e-032
gb|BP648892.1|BP648892 BP648892 RAFL19 Arabidopsis thaliana... 143 6e-032
gb|BP577273.1|BP577273 BP577273 RAFL14 Arabidopsis thaliana... 141 2e-031
gb|BP564344.1|BP564344 BP564344 RAFL14 Arabidopsis thaliana... 139 9e-031
gb|BP577470.1|BP577470 BP577470 RAFL14 Arabidopsis thaliana... 139 9e-031
gb|BP639587.1|BP639587 BP639587 RAFL19 Arabidopsis thaliana... 139 9e-031
gb|BP650819.1|BP650819 BP650819 RAFL19 Arabidopsis thaliana... 139 9e-031
gb|AV787809.1|AV787809 AV787809 RAFL6 Arabidopsis thaliana ... 137 3e-030
gb|BP625067.1|BP625067 BP625067 RAFL17 Arabidopsis thaliana... 137 3e-030
gb|BP644385.1|BP644385 BP644385 RAFL19 Arabidopsis thaliana... 137 3e-030
gb|AV794154.1|AV794154 AV794154 RAFL8 Arabidopsis thaliana ... 135 1e-029
gb|BP647548.1|BP647548 BP647548 RAFL19 Arabidopsis thaliana... 135 1e-029
gb|AV553829.1|AV553829 AV553829 Arabidopsis thaliana roots ... 133 5e-029
gb|BP644772.1|BP644772 BP644772 RAFL19 Arabidopsis thaliana... 133 5e-029
gb|BP656135.1|BP656135 BP656135 RAFL19 Arabidopsis thaliana... 133 5e-029
gb|BP657150.1|BP657150 BP657150 RAFL19 Arabidopsis thaliana... 133 5e-029
gb|BP640396.1|BP640396 BP640396 RAFL19 Arabidopsis thaliana... 131 2e-028
gb|BP669875.1|BP669875 BP669875 RAFL21 Arabidopsis thaliana... 131 2e-028
gb|BP670504.1|BP670504 BP670504 RAFL21 Arabidopsis thaliana... 131 2e-028
gb|BZ769940.1|BZ769940 SALK_142874.53.50.x Arabidopsis thal... 129 8e-028
gb|BP590157.1|BP590157 BP590157 RAFL15 Arabidopsis thaliana... 129 8e-028
gb|BP626011.1|BP626011 BP626011 RAFL17 Arabidopsis thaliana... 129 8e-028
gb|BP642003.1|BP642003 BP642003 RAFL19 Arabidopsis thaliana... 129 8e-028
gb|CB261315.1|CB261315 08-E9573-012-004-P02-T7R MPIZ-ADIS-0... 127 3e-027
gb|CB261515.1|CB261515 32-E020823-012-004-P02q-T7R MPIZ-ADI... 127 3e-027
gb|BP581489.1|BP581489 BP581489 RAFL14 Arabidopsis thaliana... 127 3e-027
gb|BP628741.1|BP628741 BP628741 RAFL17 Arabidopsis thaliana... 127 3e-027
gb|Z17791.1|Z17791 ATTS0365 Gif-SeedA+B Arabidopsis thalian... 127 3e-027
gb|AV533902.1|AV533902 AV533902 Arabidopsis thaliana flower... 125 1e-026
gb|CD531488.1|CD531488 10P20 Arabidopsis Leaf Senescence Li... 123 5e-026
gb|BP630049.1|BP630049 BP630049 RAFL17 Arabidopsis thaliana... 123 5e-026
gb|AV535648.1|AV535648 AV535648 Arabidopsis thaliana flower... 113 5e-023
gb|AV559935.1|AV559935 AV559935 Arabidopsis thaliana green ... 113 5e-023
gb|BP592430.1|BP592430 BP592430 RAFL15 Arabidopsis thaliana... 113 5e-023
gb|AA713022.1|AA713022 32584 Lambda-PRL2 Arabidopsis thalia... 111 2e-022
gb|N37540.1|N37540 18767 Lambda-PRL2 Arabidopsis thaliana c... 103 5e-020
dbj|AB016875.1| Arabidopsis thaliana genomic DNA, chromosom... 103 5e-020
ref|NM_123730.1| Arabidopsis thaliana structural constituen... 103 5e-020
gb|BP637705.1|BP637705 BP637705 RAFL19 Arabidopsis thaliana... 100 8e-019
gb|AQ956828.1|AQ956828 LERAM31TF LERA Arabidopsis thaliana ... 98 3e-018
gb|AQ956829.1|AQ956829 LERAM31TR LERA Arabidopsis thaliana ... 98 3e-018
gb|BP569334.1|BP569334 BP569334 RAFL14 Arabidopsis thaliana... 86 1e-014
gb|AY086958.1| Arabidopsis thaliana clone 29963 mRNA, compl... 84 5e-014
gb|BP567001.1|BP567001 BP567001 RAFL14 Arabidopsis thaliana... 80 7e-013
gb|BP853164.1|BP853164 BP853164 RAFL21 Arabidopsis thaliana... 80 7e-013
gb|BH214207.1|BH214207 SALK_010406 Arabidopsis thaliana TDN... 78 3e-012
gb|BP565113.1|BP565113 BP565113 RAFL14 Arabidopsis thaliana... 78 3e-012
gb|AV555142.1|AV555142 AV555142 Arabidopsis thaliana green ... 76 1e-011
ref|NM_120986.2| Arabidopsis thaliana structural constituen... 76 1e-011
gb|BH251399.1|BH251399 SALK_011527 Arabidopsis thaliana TDN... 70 7e-010
emb|AL755805.1| Arabidopsis thaliana T-DNA flanking sequenc... 70 7e-010
emb|AL755807.1| Arabidopsis thaliana T-DNA flanking sequenc... 70 7e-010
gb|AW004145.1|AW004145 701500185 A. thaliana, Ohio State cl... 70 7e-010
gb|AU235816.1|AU235816 AU235816 RAFL14 Arabidopsis thaliana... 70 7e-010
emb|AJ553533.1|ATH553533 Arabidopsis thaliana T-DNA flankin... 70 7e-010
gb|BT010135.1| Arabidopsis thaliana At5g09500 gene, complet... 70 7e-010
ref|NM_120987.2| Arabidopsis thaliana structural constituen... 70 7e-010
gb|BP836703.1|BP836703 BP836703 RAFL19 Arabidopsis thaliana... 66 1e-008
gb|BP654930.1|BP654930 BP654930 RAFL19 Arabidopsis thaliana... 64 4e-008
gb|BP596175.1|BP596175 BP596175 RAFL15 Arabidopsis thaliana... 60 7e-007
gb|N65110.1|N65110 20150 Lambda-PRL2 Arabidopsis thaliana c... 58 3e-006
emb|AL083094.1|CNS00OE0 Arabidopsis thaliana genome survey ... 56 1e-005
gb|BP854001.1|BP854001 BP854001 RAFL21 Arabidopsis thaliana... 56 1e-005
gb|BZ761659.1|BZ761659 SALK_074986.53.30.x Arabidopsis thal... 52 2e-004
gb|AU226581.1|AU226581 AU226581 RAFL14 Arabidopsis thaliana... 52 2e-004
gb|BP641726.1|BP641726 BP641726 RAFL19 Arabidopsis thaliana... 52 2e-004
gb|BP827322.1|BP827322 BP827322 RAFL19 Arabidopsis thaliana... 52 2e-004
gb|BP805620.1|BP805620 BP805620 RAFL16 Arabidopsis thaliana... 50 6e-004
dbj|AB008265.1| Arabidopsis thaliana genomic DNA, chromosom... 50 6e-004
gb|DQ056736.1| Arabidopsis thaliana putative 40S ribosomal ... 50 6e-004
ref|NM_125701.1| Arabidopsis thaliana structural constituen... 50 6e-004
gb|BP585087.1|BP585087 BP585087 RAFL15 Arabidopsis thaliana... 48 0.002
gb|CB260534.1|CB260534 87-E9572-012-004-N21-T7R MPIZ-ADIS-0... 46 0.010
gb|BP855680.1|BP855680 BP855680 RAFL21 Arabidopsis thaliana... 46 0.010
gb|AC010164.2|AC010164 Arabidopsis thaliana chromosome I BA... 46 0.010
gb|AC022288.5|AC022288 Arabidopsis thaliana chromosome 1 BA... 46 0.010
ref|NM_103107.1| Arabidopsis thaliana structural constituen... 46 0.010
gb|BZ292978.1|BZ292978 SALK_129050.48.35.x Arabidopsis thal... 44 0.039
emb|CR360807.1| Arabidopsis thaliana T-DNA flanking sequenc... 44 0.039
gb|AV536598.1|AV536598 AV536598 Arabidopsis thaliana liquid... 42 0.15
gb|BP812124.1|BP812124 BP812124 RAFL19 Arabidopsis thaliana... 42 0.15
gb|BP815011.1|BP815011 BP815011 RAFL19 Arabidopsis thaliana... 42 0.15
gb|BP831621.1|BP831621 BP831621 RAFL19 Arabidopsis thaliana... 42 0.15
gb|BP840222.1|BP840222 BP840222 RAFL19 Arabidopsis thaliana... 42 0.15
gb|BP844755.1|BP844755 BP844755 RAFL21 Arabidopsis thaliana... 42 0.15
gb|BP849184.1|BP849184 BP849184 RAFL21 Arabidopsis thaliana... 42 0.15
gb|BP853893.1|BP853893 BP853893 RAFL21 Arabidopsis thaliana... 42 0.15
>gb|BE039272.1|BE039272 AC01D03 AC Arabidopsis thaliana cDNA 5' similar to 40s ribosomal
protein s15, mRNA sequence
Length = 726
Score = 161 bits (81), Expect = 2e-037
Identities = 186/221 (84%)
Strand = Plus / Plus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | |||||||||||||| || || ||||||
Sbjct: 281 gagaagccagaaccagtgagaacccacttgaggaacatgatcattgtgcctgaaatgatt 340
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| ||||||| |||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 341 ggaagcatcattggtgtgtacaatggaaagactttcaaccaagtggagatcaagcctgag 400
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| || || ||||||||||||||||| || |||||||| || |||||||| |||
Sbjct: 401 atgattggacattaccttgcagagttctccatctcgtacaagccagttaagcacggtagg 460
Query: 582 cccggtattggtgccactcactcctcgcggtttatccctct 622
|| || ||||||| || |||||||| |||| ||||||||
Sbjct: 461 cctggcgttggtgctacccactcctccaggttcatccctct 501
>gb|AV826432.1|AV826432 AV826432 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-15-A10 5',
mRNA sequence
Length = 630
Score = 161 bits (81), Expect = 2e-037
Identities = 186/221 (84%)
Strand = Plus / Plus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | |||||||||||||| || || ||||||
Sbjct: 312 gagaagccagaaccagtgagaacccacttgaggaacatgatcattgtgcctgaaatgatt 371
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| ||||||| |||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 372 ggaagcatcattggtgtgtacaatggaaagactttcaaccaagtggagatcaagcctgag 431
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| || || ||||||||||||||||| || |||||||| || |||||||| |||
Sbjct: 432 atgattggacattaccttgcagagttctccatctcgtacaagccagttaagcacggtagg 491
Query: 582 cccggtattggtgccactcactcctcgcggtttatccctct 622
|| || ||||||| || |||||||| |||| ||||||||
Sbjct: 492 cctggcgttggtgctacccactcctccaggttcatccctct 532
>gb|AV537607.1|AV537607 AV537607 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ09f04F 3', mRNA sequence
Length = 602
Score = 161 bits (81), Expect = 2e-037
Identities = 186/221 (84%)
Strand = Plus / Minus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | |||||||||||||| || || ||||||
Sbjct: 386 gagaagccagaaccagtgagaacccacttgaggaacatgatcattgtgcctgaaatgatt 327
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| ||||||| |||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 326 ggaagcatcattggtgtgtacaatggaaagactttcaaccaagtggagatcaagcctgag 267
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| || || ||||||||||||||||| || |||||||| || |||||||| |||
Sbjct: 266 atgattggacattaccttgcagagttctccatctcgtacaagccagttaagcacggtagg 207
Query: 582 cccggtattggtgccactcactcctcgcggtttatccctct 622
|| || ||||||| || |||||||| |||| ||||||||
Sbjct: 206 cctggcgttggtgctacccactcctccaggttcatccctct 166
>gb|AV544220.1|AV544220 AV544220 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ36d04F 3', mRNA sequence
Length = 658
Score = 161 bits (81), Expect = 2e-037
Identities = 186/221 (84%)
Strand = Plus / Minus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | |||||||||||||| || || ||||||
Sbjct: 410 gagaagccagaaccagtgagaacccacttgaggaacatgatcattgtgcctgaaatgatt 351
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| ||||||| |||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 350 ggaagcatcattggtgtgtacaatggaaagactttcaaccaagtggagatcaagcctgag 291
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| || || ||||||||||||||||| || |||||||| || |||||||| |||
Sbjct: 290 atgattggacattaccttgcagagttctccatctcgtacaagccagttaagcacggtagg 231
Query: 582 cccggtattggtgccactcactcctcgcggtttatccctct 622
|| || ||||||| || |||||||| |||| ||||||||
Sbjct: 230 cctggcgttggtgctacccactcctccaggttcatccctct 190
>gb|AV549585.1|AV549585 AV549585 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ09f04R 5', mRNA sequence
Length = 562
Score = 161 bits (81), Expect = 2e-037
Identities = 186/221 (84%)
Strand = Plus / Plus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | |||||||||||||| || || ||||||
Sbjct: 277 gagaagccagaaccagtgagaacccacttgaggaacatgatcattgtgcctgaaatgatt 336
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| ||||||| |||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 337 ggaagcatcattggtgtgtacaatggaaagactttcaaccaagtggagatcaagcctgag 396
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| || || ||||||||||||||||| || |||||||| || |||||||| |||
Sbjct: 397 atgattggacattaccttgcagagttctccatctcgtacaagccagttaagcacggtagg 456
Query: 582 cccggtattggtgccactcactcctcgcggtttatccctct 622
|| || ||||||| || |||||||| |||| ||||||||
Sbjct: 457 cctggcgttggtgctacccactcctccaggttcatccctct 497
>gb|AY050966.1| Arabidopsis thaliana putative ribosomal protein S15 (At5g09510)
mRNA, complete cds
Length = 1160
Score = 161 bits (81), Expect = 2e-037
Identities = 186/221 (84%)
Strand = Plus / Plus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | |||||||||||||| || || ||||||
Sbjct: 311 gagaagccagaaccagtgagaacccacttgaggaacatgatcattgtgcctgaaatgatt 370
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| ||||||| |||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 371 ggaagcatcattggtgtgtacaatggaaagactttcaaccaagtggagatcaagcctgag 430
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| || || ||||||||||||||||| || |||||||| || |||||||| |||
Sbjct: 431 atgattggacattaccttgcagagttctccatctcgtacaagccagttaagcacggtagg 490
Query: 582 cccggtattggtgccactcactcctcgcggtttatccctct 622
|| || ||||||| || |||||||| |||| ||||||||
Sbjct: 491 cctggcgttggtgctacccactcctccaggttcatccctct 531
>gb|AY096616.1| Arabidopsis thaliana putative ribosomal protein S15 (AT5g09510)
mRNA, complete cds
Length = 490
Score = 161 bits (81), Expect = 2e-037
Identities = 186/221 (84%)
Strand = Plus / Plus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | |||||||||||||| || || ||||||
Sbjct: 232 gagaagccagaaccagtgagaacccacttgaggaacatgatcattgtgcctgaaatgatt 291
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| ||||||| |||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 292 ggaagcatcattggtgtgtacaatggaaagactttcaaccaagtggagatcaagcctgag 351
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| || || ||||||||||||||||| || |||||||| || |||||||| |||
Sbjct: 352 atgattggacattaccttgcagagttctccatctcgtacaagccagttaagcacggtagg 411
Query: 582 cccggtattggtgccactcactcctcgcggtttatccctct 622
|| || ||||||| || |||||||| |||| ||||||||
Sbjct: 412 cctggcgttggtgctacccactcctccaggttcatccctct 452
>gb|AY085630.1| Arabidopsis thaliana clone 164 mRNA, complete sequence
Length = 753
Score = 161 bits (81), Expect = 2e-037
Identities = 186/221 (84%)
Strand = Plus / Plus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | |||||||||||||| || || ||||||
Sbjct: 351 gagaagccagaaccagtgagaacccacttgaggaacatgatcattgtgcctgaaatgatt 410
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| ||||||| |||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 411 ggaagcatcattggtgtgtacaatggaaagactttcaaccaagtggagatcaagcctgag 470
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| || || ||||||||||||||||| || |||||||| || |||||||| |||
Sbjct: 471 atgattggacattaccttgcagagttctccatctcgtacaagccagttaagcacggtagg 530
Query: 582 cccggtattggtgccactcactcctcgcggtttatccctct 622
|| || ||||||| || |||||||| |||| ||||||||
Sbjct: 531 cctggcgttggtgctacccactcctccaggttcatccctct 571
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 161 bits (81), Expect = 2e-037
Identities = 186/221 (84%)
Strand = Plus / Minus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | |||||||||||||| || || ||||||
Sbjct: 2775011 gagaagccagaaccagtgagaacccacttgaggaacatgatcattgtgcctgaaatgatt 2774952
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| ||||||| |||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 2774951 ggaagcatcattggtgtgtacaatggaaagactttcaaccaagtggagatcaagcctgag 2774892
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| || || ||||||||||||||||| || |||||||| || |||||||| |||
Sbjct: 2774891 atgattggacattaccttgcagagttctccatctcgtacaagccagttaagcacggtagg 2774832
Query: 582 cccggtattggtgccactcactcctcgcggtttatccctct 622
|| || ||||||| || |||||||| |||| ||||||||
Sbjct: 2774831 cctggcgttggtgctacccactcctccaggttcatccctct 2774791
Score = 69.9 bits (35), Expect = 7e-010
Identities = 80/95 (84%)
Strand = Plus / Minus
Query: 435 aacatgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagacc 494
|||||||||||||| || || |||||||| ||| | | ||||| |||||||| |||||
Sbjct: 2773324 aacatgatcattgtgcctgaaatgattggaagcgtcatcggtgtttacaatggaaagact 2773265
Query: 495 ttcaaccaggttgagatcaagcctgagatgattgg 529
|| |||||||| |||||||| || |||||||||||
Sbjct: 2773264 tttaaccaggtcgagatcaaaccagagatgattgg 2773230
Score = 69.9 bits (35), Expect = 7e-010
Identities = 134/167 (80%)
Strand = Plus / Minus
Query: 456 atgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaag 515
|||||||| ||||| ||||||| |||||||| ||||| || ||||| | ||||||||
Sbjct: 2771637 atgattggaagcatcattggtgtgtacaatggaaagacttttaaccaaatcgagatcaaa 2771578
Query: 516 cctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaagcac 575
|| ||||||||||| || || ||||| || ||||| || | ||||| || || | ||||
Sbjct: 2771577 ccggagatgattggacattaccttgcggaattctcaatcacttacaaacccgttaggcac 2771518
Query: 576 gggaggcccggtattggtgccactcactcctcgcggtttatccctct 622
|| | ||||||| |||||| || |||||||| |||||||||||||
Sbjct: 2771517 ggcaagcccggtcatggtgctacacactcctctaggtttatccctct 2771471
>emb|AL391712.1|ATT5E8 Arabidopsis thaliana DNA chromosome 5, BAC clone T5E8 (ESSA project)
Length = 103534
Score = 161 bits (81), Expect = 2e-037
Identities = 186/221 (84%)
Strand = Plus / Minus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | |||||||||||||| || || ||||||
Sbjct: 96710 gagaagccagaaccagtgagaacccacttgaggaacatgatcattgtgcctgaaatgatt 96651
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| ||||||| |||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 96650 ggaagcatcattggtgtgtacaatggaaagactttcaaccaagtggagatcaagcctgag 96591
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| || || ||||||||||||||||| || |||||||| || |||||||| |||
Sbjct: 96590 atgattggacattaccttgcagagttctccatctcgtacaagccagttaagcacggtagg 96531
Query: 582 cccggtattggtgccactcactcctcgcggtttatccctct 622
|| || ||||||| || |||||||| |||| ||||||||
Sbjct: 96530 cctggcgttggtgctacccactcctccaggttcatccctct 96490
Score = 69.9 bits (35), Expect = 7e-010
Identities = 80/95 (84%)
Strand = Plus / Minus
Query: 435 aacatgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagacc 494
|||||||||||||| || || |||||||| ||| | | ||||| |||||||| |||||
Sbjct: 95023 aacatgatcattgtgcctgaaatgattggaagcgtcatcggtgtttacaatggaaagact 94964
Query: 495 ttcaaccaggttgagatcaagcctgagatgattgg 529
|| |||||||| |||||||| || |||||||||||
Sbjct: 94963 tttaaccaggtcgagatcaaaccagagatgattgg 94929
Score = 69.9 bits (35), Expect = 7e-010
Identities = 134/167 (80%)
Strand = Plus / Minus
Query: 456 atgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaag 515
|||||||| ||||| ||||||| |||||||| ||||| || ||||| | ||||||||
Sbjct: 93336 atgattggaagcatcattggtgtgtacaatggaaagacttttaaccaaatcgagatcaaa 93277
Query: 516 cctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaagcac 575
|| ||||||||||| || || ||||| || ||||| || | ||||| || || | ||||
Sbjct: 93276 ccggagatgattggacattaccttgcggaattctcaatcacttacaaacccgttaggcac 93217
Query: 576 gggaggcccggtattggtgccactcactcctcgcggtttatccctct 622
|| | ||||||| |||||| || |||||||| |||||||||||||
Sbjct: 93216 ggcaagcccggtcatggtgctacacactcctctaggtttatccctct 93170
>ref|NM_120988.2| Arabidopsis thaliana structural constituent of ribosome AT5G09510
mRNA, complete cds
Length = 1163
Score = 161 bits (81), Expect = 2e-037
Identities = 186/221 (84%)
Strand = Plus / Plus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | |||||||||||||| || || ||||||
Sbjct: 351 gagaagccagaaccagtgagaacccacttgaggaacatgatcattgtgcctgaaatgatt 410
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| ||||||| |||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 411 ggaagcatcattggtgtgtacaatggaaagactttcaaccaagtggagatcaagcctgag 470
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| || || ||||||||||||||||| || |||||||| || |||||||| |||
Sbjct: 471 atgattggacattaccttgcagagttctccatctcgtacaagccagttaagcacggtagg 530
Query: 582 cccggtattggtgccactcactcctcgcggtttatccctct 622
|| || ||||||| || |||||||| |||| ||||||||
Sbjct: 531 cctggcgttggtgctacccactcctccaggttcatccctct 571
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 161 bits (81), Expect = 2e-037
Identities = 186/221 (84%)
Strand = Plus / Minus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | |||||||||||||| || || ||||||
Sbjct: 2955926 gagaagccagaaccagtgagaacccacttgaggaacatgatcattgtgcctgaaatgatt 2955867
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| ||||||| |||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 2955866 ggaagcatcattggtgtgtacaatggaaagactttcaaccaagtggagatcaagcctgag 2955807
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| || || ||||||||||||||||| || |||||||| || |||||||| |||
Sbjct: 2955806 atgattggacattaccttgcagagttctccatctcgtacaagccagttaagcacggtagg 2955747
Query: 582 cccggtattggtgccactcactcctcgcggtttatccctct 622
|| || ||||||| || |||||||| |||| ||||||||
Sbjct: 2955746 cctggcgttggtgctacccactcctccaggttcatccctct 2955706
Score = 103 bits (52), Expect = 5e-020
Identities = 154/188 (81%)
Strand = Plus / Plus
Query: 435 aacatgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagacc 494
|||||||||||||| || || |||||||| ||||| ||||||| ||||| || |||||
Sbjct: 17549403 aacatgatcattgtgcctgaaatgattggaagcatcattggtgtgtacaacggaaagact 17549462
Query: 495 ttcaaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatt 554
|| ||||| || ||||||||||| ||||||||||| || || | || |||||||| ||
Sbjct: 17549463 tttaaccaagtcgagatcaagccggagatgattggacattacttggctgagttctcaatc 17549522
Query: 555 tcctacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggttt 614
|| ||||| ||||| |||||||| ||||| ||| ||||||| || | ||||| |||||
Sbjct: 17549523 tcatacaaaccggtaaagcacggtaggcctggtgttggtgctaccaattcctccaggttt 17549582
Query: 615 atccctct 622
||||||||
Sbjct: 17549583 atccctct 17549590
Score = 69.9 bits (35), Expect = 7e-010
Identities = 80/95 (84%)
Strand = Plus / Minus
Query: 435 aacatgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagacc 494
|||||||||||||| || || |||||||| ||| | | ||||| |||||||| |||||
Sbjct: 2954239 aacatgatcattgtgcctgaaatgattggaagcgtcatcggtgtttacaatggaaagact 2954180
Query: 495 ttcaaccaggttgagatcaagcctgagatgattgg 529
|| |||||||| |||||||| || |||||||||||
Sbjct: 2954179 tttaaccaggtcgagatcaaaccagagatgattgg 2954145
Score = 69.9 bits (35), Expect = 7e-010
Identities = 134/167 (80%)
Strand = Plus / Minus
Query: 456 atgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaag 515
|||||||| ||||| ||||||| |||||||| ||||| || ||||| | ||||||||
Sbjct: 2952552 atgattggaagcatcattggtgtgtacaatggaaagacttttaaccaaatcgagatcaaa 2952493
Query: 516 cctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaagcac 575
|| ||||||||||| || || ||||| || ||||| || | ||||| || || | ||||
Sbjct: 2952492 ccggagatgattggacattaccttgcggaattctcaatcacttacaaacccgttaggcac 2952433
Query: 576 gggaggcccggtattggtgccactcactcctcgcggtttatccctct 622
|| | ||||||| |||||| || |||||||| |||||||||||||
Sbjct: 2952432 ggcaagcccggtcatggtgctacacactcctctaggtttatccctct 2952386
Score = 50.1 bits (25), Expect = 6e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 435 aacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||||||||
Sbjct: 25316610 aacatgatcattgtccctgagatgattgg 25316582
>gb|BE037545.1|BE037545 AA01A06 AA Arabidopsis thaliana cDNA 5' similar to 40s ribosomal
protein s15, mRNA sequence
Length = 758
Score = 159 bits (80), Expect = 9e-037
Identities = 224/272 (82%)
Strand = Plus / Plus
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||||||| |||||||| ||||| || || ||||||||| | || ||||||| ||| ||
Sbjct: 258 ggtttgacaaggaagccaatggctctgattaagaagctgaggaaagcgaaaagggaggca 317
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| || ||||||||||| ||||||| ||||| | | ||||||||||| |||||
Sbjct: 318 ccacaaggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccct 377
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|| |||||||| ||||| |||| || ||||| || ||||| ||||||||||||||||||
Sbjct: 378 gaaatgattggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatc 437
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||||||||||||||| ||||| || || |||||||| || || |||||||||||||||
Sbjct: 438 aagcctgagatgattggtcactacctggctgagttctctatctcatacaagccggtcaag 497
Query: 573 cacgggaggcccggtattggtgccactcactc 604
||||| ||||| ||| ||||||| || |||||
Sbjct: 498 cacggtaggcctggtgttggtgctacccactc 529
>gb|BE038613.1|BE038613 AB01H05 AB Arabidopsis thaliana cDNA 5' similar to ribosomal
protein s15, mRNA sequence
Length = 709
Score = 159 bits (80), Expect = 9e-037
Identities = 224/272 (82%)
Strand = Plus / Plus
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||||||| |||||||| ||||| || || ||||||||| | || ||||||| ||| ||
Sbjct: 218 ggtttgacaaggaagccaatggctctgattaagaagctgaggaaagcgaaaagggaggca 277
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| || ||||||||||| ||||||| ||||| | | ||||||||||| |||||
Sbjct: 278 ccacaaggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccct 337
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|| |||||||| ||||| |||| || ||||| || ||||| ||||||||||||||||||
Sbjct: 338 gaaatgattggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatc 397
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||||||||||||||| ||||| || || |||||||| || || |||||||||||||||
Sbjct: 398 aagcctgagatgattggtcactacctggctgagttctctatctcatacaagccggtcaag 457
Query: 573 cacgggaggcccggtattggtgccactcactc 604
||||| ||||| ||| ||||||| || |||||
Sbjct: 458 cacggtaggcctggtgttggtgctacccactc 489
>gb|BE038827.1|BE038827 AB04G03 AB Arabidopsis thaliana cDNA 5' similar to 40s ribosomal
protein s15, mRNA sequence
Length = 729
Score = 159 bits (80), Expect = 9e-037
Identities = 224/272 (82%)
Strand = Plus / Minus
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||||||| |||||||| ||||| || || ||||||||| | || ||||||| ||| ||
Sbjct: 546 ggtttgacaaggaagccaatggctctgattaagaagctgaggaaagcgaaaagggaggca 487
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| || ||||||||||| ||||||| ||||| | | ||||||||||| |||||
Sbjct: 486 ccacaaggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccct 427
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|| |||||||| ||||| |||| || ||||| || ||||| ||||||||||||||||||
Sbjct: 426 gaaatgattggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatc 367
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||||||||||||||| ||||| || || |||||||| || || |||||||||||||||
Sbjct: 366 aagcctgagatgattggtcactacctggctgagttctctatctcatacaagccggtcaag 307
Query: 573 cacgggaggcccggtattggtgccactcactc 604
||||| ||||| ||| ||||||| || |||||
Sbjct: 306 cacggtaggcctggtgttggtgctacccactc 275
>gb|AV784120.1|AV784120 AV784120 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-16-H14 3',
mRNA sequence
Length = 683
Score = 159 bits (80), Expect = 9e-037
Identities = 224/272 (82%)
Strand = Plus / Minus
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||||||| |||||||| ||||| || || ||||||||| | || ||||||| ||| ||
Sbjct: 476 ggtttgacaaggaagccaatggctctgattaagaagctgaggaaagcgaaaagggaggca 417
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| || ||||||||||| ||||||| ||||| | | ||||||||||| |||||
Sbjct: 416 ccacaaggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccct 357
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|| |||||||| ||||| |||| || ||||| || ||||| ||||||||||||||||||
Sbjct: 356 gaaatgattggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatc 297
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||||||||||||||| ||||| || || |||||||| || || |||||||||||||||
Sbjct: 296 aagcctgagatgattggtcactacctggctgagttctctatctcatacaagccggtcaag 237
Query: 573 cacgggaggcccggtattggtgccactcactc 604
||||| ||||| ||| ||||||| || |||||
Sbjct: 236 cacggtaggcctggtgttggtgctacccactc 205
>gb|AV823191.1|AV823191 AV823191 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-16-H14 5',
mRNA sequence
Length = 649
Score = 159 bits (80), Expect = 9e-037
Identities = 224/272 (82%)
Strand = Plus / Plus
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||||||| |||||||| ||||| || || ||||||||| | || ||||||| ||| ||
Sbjct: 255 ggtttgacaaggaagccaatggctctgattaagaagctgaggaaagcgaaaagggaggca 314
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| || ||||||||||| ||||||| ||||| | | ||||||||||| |||||
Sbjct: 315 ccacaaggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccct 374
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|| |||||||| ||||| |||| || ||||| || ||||| ||||||||||||||||||
Sbjct: 375 gaaatgattggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatc 434
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||||||||||||||| ||||| || || |||||||| || || |||||||||||||||
Sbjct: 435 aagcctgagatgattggtcactacctggctgagttctctatctcatacaagccggtcaag 494
Query: 573 cacgggaggcccggtattggtgccactcactc 604
||||| ||||| ||| ||||||| || |||||
Sbjct: 495 cacggtaggcctggtgttggtgctacccactc 526
>gb|CA781266.1|CA781266 014B04AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 665
Score = 159 bits (80), Expect = 9e-037
Identities = 224/272 (82%)
Strand = Plus / Plus
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||||||| |||||||| ||||| || || ||||||||| | || ||||||| ||| ||
Sbjct: 203 ggtttgacaaggaagccaatggctctgattaagaagctgaggaaagcgaaaagggaggca 262
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| || ||||||||||| ||||||| ||||| | | ||||||||||| |||||
Sbjct: 263 ccacaaggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccct 322
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|| |||||||| ||||| |||| || ||||| || ||||| ||||||||||||||||||
Sbjct: 323 gaaatgattggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatc 382
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||||||||||||||| ||||| || || |||||||| || || |||||||||||||||
Sbjct: 383 aagcctgagatgattggtcactacctggctgagttctctatctcatacaagccggtcaag 442
Query: 573 cacgggaggcccggtattggtgccactcactc 604
||||| ||||| ||| ||||||| || |||||
Sbjct: 443 cacggtaggcctggtgttggtgctacccactc 474
>gb|AV532062.1|AV532062 AV532062 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB035a04F 3', mRNA sequence
Length = 508
Score = 159 bits (80), Expect = 9e-037
Identities = 224/272 (82%)
Strand = Plus / Minus
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||||||| |||||||| ||||| || || ||||||||| | || ||||||| ||| ||
Sbjct: 477 ggtttgacaaggaagccaatggctctgattaagaagctgaggaaagcgaaaagggaggca 418
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| || ||||||||||| ||||||| ||||| | | ||||||||||| |||||
Sbjct: 417 ccacaaggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccct 358
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|| |||||||| ||||| |||| || ||||| || ||||| ||||||||||||||||||
Sbjct: 357 gaaatgattggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatc 298
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||||||||||||||| ||||| || || |||||||| || || |||||||||||||||
Sbjct: 297 aagcctgagatgattggtcactacctggctgagttctctatctcatacaagccggtcaag 238
Query: 573 cacgggaggcccggtattggtgccactcactc 604
||||| ||||| ||| ||||||| || |||||
Sbjct: 237 cacggtaggcctggtgttggtgctacccactc 206
>gb|AV535553.1|AV535553 AV535553 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB098c03F 3', mRNA sequence
Length = 371
Score = 159 bits (80), Expect = 9e-037
Identities = 161/188 (85%)
Strand = Plus / Minus
Query: 435 aacatgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagacc 494
|||||||||||||| || || |||||||| ||||| ||||||| |||||||| |||||
Sbjct: 369 aacatgatcattgtgcctgaaatgattggaagcatcattggtgtgtacaatggaaagact 310
Query: 495 ttcaaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatt 554
|||||||| || ||||||||||||||||||||||| || || |||||||||||||||||
Sbjct: 309 ttcaaccaagtggagatcaagcctgagatgattggacattaccttgcagagttctccatc 250
Query: 555 tcctacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggttt 614
|| |||||||| || |||||||| ||||| || ||||||| || |||||||| ||||
Sbjct: 249 tcgtacaagccagttaagcacggtaggcctggcgttggtgctacccactcctccaggttc 190
Query: 615 atccctct 622
||||||||
Sbjct: 189 atccctct 182
>gb|AV538084.1|AV538084 AV538084 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ11b11F 3', mRNA sequence
Length = 620
Score = 159 bits (80), Expect = 9e-037
Identities = 224/272 (82%)
Strand = Plus / Minus
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||||||| |||||||| ||||| || || ||||||||| | || ||||||| ||| ||
Sbjct: 478 ggtttgacaaggaagccaatggctctgattaagaagctgaggaaagcgaaaagggaggca 419
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| || ||||||||||| ||||||| ||||| | | ||||||||||| |||||
Sbjct: 418 ccacaaggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccct 359
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|| |||||||| ||||| |||| || ||||| || ||||| ||||||||||||||||||
Sbjct: 358 gaaatgattggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatc 299
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||||||||||||||| ||||| || || |||||||| || || |||||||||||||||
Sbjct: 298 aagcctgagatgattggtcactacctggctgagttctctatctcatacaagccggtcaag 239
Query: 573 cacgggaggcccggtattggtgccactcactc 604
||||| ||||| ||| ||||||| || |||||
Sbjct: 238 cacggtaggcctggtgttggtgctacccactc 207
Score = 105 bits (53), Expect = 1e-020
Identities = 95/109 (87%)
Strand = Plus / Minus
Query: 496 tcaaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccattt 555
|||||| |||||| |||||||||||||||||||| ||||| || || |||||||| || |
Sbjct: 191 tcaacctggttgaaatcaagcctgagatgattggtcactacctggctgagttctctatct 132
Query: 556 cctacaagccggtcaagcacgggaggcccggtattggtgccactcactc 604
| |||||||||||||||||||| ||||| ||| ||||||| || |||||
Sbjct: 131 catacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 83
Score = 56.0 bits (28), Expect = 1e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 495 ttcaaccaggttgagatcaagcctgaga 522
||||||||||||||||||||||||||||
Sbjct: 178 ttcaaccaggttgagatcaagcctgaga 205
>gb|AV538711.1|AV538711 AV538711 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ120a09F 3', mRNA sequence
Length = 597
Score = 159 bits (80), Expect = 9e-037
Identities = 224/272 (82%)
Strand = Plus / Minus
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||||||| |||||||| ||||| || || ||||||||| | || ||||||| ||| ||
Sbjct: 477 ggtttgacaaggaagccaatggctctgattaagaagctgaggaaagcgaaaagggaggca 418
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| || ||||||||||| ||||||| ||||| | | ||||||||||| |||||
Sbjct: 417 ccacaaggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccct 358
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|| |||||||| ||||| |||| || ||||| || ||||| ||||||||||||||||||
Sbjct: 357 gaaatgattggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatc 298
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||||||||||||||| ||||| || || |||||||| || || |||||||||||||||
Sbjct: 297 aagcctgagatgattggtcactacctggctgagttctctatctcatacaagccggtcaag 238
Query: 573 cacgggaggcccggtattggtgccactcactc 604
||||| ||||| ||| ||||||| || |||||
Sbjct: 237 cacggtaggcctggtgttggtgctacccactc 206
>gb|AV544758.1|AV544758 AV544758 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ58c02F 3', mRNA sequence
Length = 651
Score = 159 bits (80), Expect = 9e-037
Identities = 224/272 (82%)
Strand = Plus / Minus
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||||||| |||||||| ||||| || || ||||||||| | || ||||||| ||| ||
Sbjct: 473 ggtttgacaaggaagccaatggctctgattaagaagctgaggaaagcgaaaagggaggca 414
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| || ||||||||||| ||||||| ||||| | | ||||||||||| |||||
Sbjct: 413 ccacaaggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccct 354
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|| |||||||| ||||| |||| || ||||| || ||||| ||||||||||||||||||
Sbjct: 353 gaaatgattggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatc 294
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||||||||||||||| ||||| || || |||||||| || || |||||||||||||||
Sbjct: 293 aagcctgagatgattggtcactacctggctgagttctctatctcatacaagccggtcaag 234
Query: 573 cacgggaggcccggtattggtgccactcactc 604
||||| ||||| ||| ||||||| || |||||
Sbjct: 233 cacggtaggcctggtgttggtgctacccactc 202
>gb|AV553255.1|AV553255 AV553255 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ58c02R 5', mRNA sequence
Length = 575
Score = 159 bits (80), Expect = 9e-037
Identities = 224/272 (82%)
Strand = Plus / Plus
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||||||| |||||||| ||||| || || ||||||||| | || ||||||| ||| ||
Sbjct: 223 ggtttgacaaggaagccaatggctctgattaagaagctgaggaaagcgaaaagggaggca 282
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| || ||||||||||| ||||||| ||||| | | ||||||||||| |||||
Sbjct: 283 ccacaaggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccct 342
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|| |||||||| ||||| |||| || ||||| || ||||| ||||||||||||||||||
Sbjct: 343 gaaatgattggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatc 402
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||||||||||||||| ||||| || || |||||||| || || |||||||||||||||
Sbjct: 403 aagcctgagatgattggtcactacctggctgagttctctatctcatacaagccggtcaag 462
Query: 573 cacgggaggcccggtattggtgccactcactc 604
||||| ||||| ||| ||||||| || |||||
Sbjct: 463 cacggtaggcctggtgttggtgctacccactc 494
>gb|AV565619.1|AV565619 AV565619 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ227f09F 3', mRNA sequence
Length = 596
Score = 159 bits (80), Expect = 9e-037
Identities = 224/272 (82%)
Strand = Plus / Minus
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||||||| |||||||| ||||| || || ||||||||| | || ||||||| ||| ||
Sbjct: 545 ggtttgacaaggaagccaatggctctgattaagaagctgaggaaagcgaaaagggaggca 486
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| || ||||||||||| ||||||| ||||| | | ||||||||||| |||||
Sbjct: 485 ccacaaggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccct 426
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|| |||||||| ||||| |||| || ||||| || ||||| ||||||||||||||||||
Sbjct: 425 gaaatgattggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatc 366
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||||||||||||||| ||||| || || |||||||| || || |||||||||||||||
Sbjct: 365 aagcctgagatgattggtcactacctggctgagttctctatctcatacaagccggtcaag 306
Query: 573 cacgggaggcccggtattggtgccactcactc 604
||||| ||||| ||| ||||||| || |||||
Sbjct: 305 cacggtaggcctggtgttggtgctacccactc 274
>gb|BP566550.1|BP566550 BP566550 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-54-F13 3',
mRNA sequence
Length = 474
Score = 159 bits (80), Expect = 9e-037
Identities = 161/188 (85%)
Strand = Plus / Minus
Query: 435 aacatgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagacc 494
|||||||||||||| || || |||||||| ||||| ||||||| |||||||| |||||
Sbjct: 393 aacatgatcattgtgcctgaaatgattggaagcatcattggtgtgtacaatggaaagact 334
Query: 495 ttcaaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatt 554
|||||||| || ||||||||||||||||||||||| || || |||||||||||||||||
Sbjct: 333 ttcaaccaagtggagatcaagcctgagatgattggacattaccttgcagagttctccatc 274
Query: 555 tcctacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggttt 614
|| |||||||| || |||||||| ||||| || ||||||| || |||||||| ||||
Sbjct: 273 tcgtacaagccagttaagcacggtaggcctggcgttggtgctacccactcctccaggttc 214
Query: 615 atccctct 622
||||||||
Sbjct: 213 atccctct 206
>gb|BP582590.1|BP582590 BP582590 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-36-N16 3',
mRNA sequence
Length = 455
Score = 159 bits (80), Expect = 9e-037
Identities = 224/272 (82%)
Strand = Plus / Minus
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||||||| |||||||| ||||| || || ||||||||| | || ||||||| ||| ||
Sbjct: 412 ggtttgacaaggaagccaatggctctgattaagaagctgaggaaagcgaaaagggaggca 353
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| || ||||||||||| ||||||| ||||| | | ||||||||||| |||||
Sbjct: 352 ccacaaggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccct 293
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|| |||||||| ||||| |||| || ||||| || ||||| ||||||||||||||||||
Sbjct: 292 gaaatgattggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatc 233
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||||||||||||||| ||||| || || |||||||| || || |||||||||||||||
Sbjct: 232 aagcctgagatgattggtcactacctggctgagttctctatctcatacaagccggtcaag 173
Query: 573 cacgggaggcccggtattggtgccactcactc 604
||||| ||||| ||| ||||||| || |||||
Sbjct: 172 cacggtaggcctggtgttggtgctacccactc 141
>gb|BP592451.1|BP592451 BP592451 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-18-G08 3',
mRNA sequence
Length = 457
Score = 159 bits (80), Expect = 9e-037
Identities = 161/188 (85%)
Strand = Plus / Minus
Query: 435 aacatgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagacc 494
|||||||||||||| || || |||||||| ||||| ||||||| |||||||| |||||
Sbjct: 457 aacatgatcattgtgcctgaaatgattggaagcatcattggtgtgtacaatggaaagact 398
Query: 495 ttcaaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatt 554
|||||||| || ||||||||||||||||||||||| || || |||||||||||||||||
Sbjct: 397 ttcaaccaagtggagatcaagcctgagatgattggacattaccttgcagagttctccatc 338
Query: 555 tcctacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggttt 614
|| |||||||| || |||||||| ||||| || ||||||| || |||||||| ||||
Sbjct: 337 tcgtacaagccagttaagcacggtaggcctggcgttggtgctacccactcctccaggttc 278
Query: 615 atccctct 622
||||||||
Sbjct: 277 atccctct 270
>gb|BP619574.1|BP619574 BP619574 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-33-M09 3',
mRNA sequence
Length = 451
Score = 159 bits (80), Expect = 9e-037
Identities = 224/272 (82%)
Strand = Plus / Minus
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||||||| |||||||| ||||| || || ||||||||| | || ||||||| ||| ||
Sbjct: 408 ggtttgacaaggaagccaatggctctgattaagaagctgaggaaagcgaaaagggaggca 349
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| || ||||||||||| ||||||| ||||| | | ||||||||||| |||||
Sbjct: 348 ccacaaggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccct 289
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|| |||||||| ||||| |||| || ||||| || ||||| ||||||||||||||||||
Sbjct: 288 gaaatgattggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatc 229
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||||||||||||||| ||||| || || |||||||| || || |||||||||||||||
Sbjct: 228 aagcctgagatgattggtcactacctggctgagttctctatctcatacaagccggtcaag 169
Query: 573 cacgggaggcccggtattggtgccactcactc 604
||||| ||||| ||| ||||||| || |||||
Sbjct: 168 cacggtaggcctggtgttggtgctacccactc 137
>gb|BP632732.1|BP632732 BP632732 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-28-D19 3',
mRNA sequence
Length = 397
Score = 159 bits (80), Expect = 9e-037
Identities = 161/188 (85%)
Strand = Plus / Minus
Query: 435 aacatgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagacc 494
|||||||||||||| || || |||||||| ||||| ||||||| |||||||| |||||
Sbjct: 393 aacatgatcattgtgcctgaaatgattggaagcatcattggtgtgtacaatggaaagact 334
Query: 495 ttcaaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatt 554
|||||||| || ||||||||||||||||||||||| || || |||||||||||||||||
Sbjct: 333 ttcaaccaagtggagatcaagcctgagatgattggacattaccttgcagagttctccatc 274
Query: 555 tcctacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggttt 614
|| |||||||| || |||||||| ||||| || ||||||| || |||||||| ||||
Sbjct: 273 tcgtacaagccagttaagcacggtaggcctggcgttggtgctacccactcctccaggttc 214
Query: 615 atccctct 622
||||||||
Sbjct: 213 atccctct 206
>gb|BP663835.1|BP663835 BP663835 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-49-K21 3',
mRNA sequence
Length = 401
Score = 159 bits (80), Expect = 9e-037
Identities = 161/188 (85%)
Strand = Plus / Minus
Query: 435 aacatgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagacc 494
||||||||||||||||| || |||||||| ||||| ||||||| |||||||| |||||
Sbjct: 392 aacatgatcattgtccctgaaatgattggaagcatcattggtgtgtacaatggaaagact 333
Query: 495 ttcaaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatt 554
|||||||| || ||||||||||||||||||||||| || || |||||||||||||||||
Sbjct: 332 ttcaaccaagtggagatcaagcctgagatgattggacattaccttgcagagttctccatc 273
Query: 555 tcctacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggttt 614
|| ||||| || || |||||||| ||||| || ||||||| || |||||||| ||||
Sbjct: 272 tcgtacaacccagttaagcacggtaggcctggccttggtgctacccactcctccaggttc 213
Query: 615 atccctct 622
||||||||
Sbjct: 212 atccctct 205
>gb|AY048221.1| Arabidopsis thaliana At1g04270/F19P19_29 mRNA, complete cds
Length = 729
Score = 159 bits (80), Expect = 9e-037
Identities = 224/272 (82%)
Strand = Plus / Plus
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||||||| |||||||| ||||| || || ||||||||| | || ||||||| ||| ||
Sbjct: 254 ggtttgacaaggaagccaatggctctgattaagaagctgaggaaagcgaaaagggaggca 313
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| || ||||||||||| ||||||| ||||| | | ||||||||||| |||||
Sbjct: 314 ccacaaggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccct 373
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|| |||||||| ||||| |||| || ||||| || ||||| ||||||||||||||||||
Sbjct: 374 gaaatgattggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatc 433
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||||||||||||||| ||||| || || |||||||| || || |||||||||||||||
Sbjct: 434 aagcctgagatgattggtcactacctggctgagttctctatctcatacaagccggtcaag 493
Query: 573 cacgggaggcccggtattggtgccactcactc 604
||||| ||||| ||| ||||||| || |||||
Sbjct: 494 cacggtaggcctggtgttggtgctacccactc 525
>gb|AY091703.1| Arabidopsis thaliana At1g04270/F19P19_29 mRNA, complete cds
Length = 459
Score = 159 bits (80), Expect = 9e-037
Identities = 224/272 (82%)
Strand = Plus / Plus
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||||||| |||||||| ||||| || || ||||||||| | || ||||||| ||| ||
Sbjct: 163 ggtttgacaaggaagccaatggctctgattaagaagctgaggaaagcgaaaagggaggca 222
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| || ||||||||||| ||||||| ||||| | | ||||||||||| |||||
Sbjct: 223 ccacaaggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccct 282
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|| |||||||| ||||| |||| || ||||| || ||||| ||||||||||||||||||
Sbjct: 283 gaaatgattggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatc 342
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||||||||||||||| ||||| || || |||||||| || || |||||||||||||||
Sbjct: 343 aagcctgagatgattggtcactacctggctgagttctctatctcatacaagccggtcaag 402
Query: 573 cacgggaggcccggtattggtgccactcactc 604
||||| ||||| ||| ||||||| || |||||
Sbjct: 403 cacggtaggcctggtgttggtgctacccactc 434
>emb|BX817406.1|CNS0ACK0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL20ZD06 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 695
Score = 159 bits (80), Expect = 9e-037
Identities = 224/272 (82%)
Strand = Plus / Plus
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||||||| |||||||| ||||| || || ||||||||| | || ||||||| ||| ||
Sbjct: 218 ggtttgacaaggaagccaatggctctgattaagaagctgaggaaagcgaaaagggaggca 277
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| || ||||||||||| ||||||| ||||| | | ||||||||||| |||||
Sbjct: 278 ccacaaggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccct 337
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|| |||||||| ||||| |||| || ||||| || ||||| ||||||||||||||||||
Sbjct: 338 gaaatgattggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatc 397
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||||||||||||||| ||||| || || |||||||| || || |||||||||||||||
Sbjct: 398 aagcctgagatgattggtcactacctggctgagttctctatctcatacaagccggtcaag 457
Query: 573 cacgggaggcccggtattggtgccactcactc 604
||||| ||||| ||| ||||||| || |||||
Sbjct: 458 cacggtaggcctggtgttggtgctacccactc 489
>emb|Z23161.1|ATRBPS15A A.thaliana ribosomal protein S15 mRNA, complete CDS
Length = 668
Score = 159 bits (80), Expect = 9e-037
Identities = 224/272 (82%)
Strand = Plus / Plus
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||||||| |||||||| ||||| || || ||||||||| | || ||||||| ||| ||
Sbjct: 192 ggtttgacaaggaagccaatggctctgattaagaagctgaggaaagcgaaaagggaggca 251
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| || ||||||||||| ||||||| ||||| | | ||||||||||| |||||
Sbjct: 252 ccacaaggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccct 311
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|| |||||||| ||||| |||| || ||||| || ||||| ||||||||||||||||||
Sbjct: 312 gaaatgattggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatc 371
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||||||||||||||| ||||| || || |||||||| || || |||||||||||||||
Sbjct: 372 aagcctgagatgattggtcactacctggctgagttctctatctcatacaagccggtcaag 431
Query: 573 cacgggaggcccggtattggtgccactcactc 604
||||| ||||| ||| ||||||| || |||||
Sbjct: 432 cacggtaggcctggtgttggtgctacccactc 463
>emb|X91962.1|AT40SRS15 A.thaliana mRNA for 40S ribosomal protein S15
Length = 694
Score = 159 bits (80), Expect = 9e-037
Identities = 224/272 (82%)
Strand = Plus / Plus
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||||||| |||||||| ||||| || || ||||||||| | || ||||||| ||| ||
Sbjct: 224 ggtttgacaaggaagccaatggctctgattaagaagctgaggaaagcgaaaagggaggca 283
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| || ||||||||||| ||||||| ||||| | | ||||||||||| ||||
Sbjct: 284 ccacaaggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcctccct 343
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|| |||||||| ||||| ||||||| ||||| || ||||| ||||||||||||||||||
Sbjct: 344 gaaatgattggcagcatcattggtgtttacaacggaaagactttcaaccaggttgagatc 403
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||||||||||||||| ||||| || || |||||||| || || |||||||||||||||
Sbjct: 404 aagcctgagatgattggtcactacctggctgagttctctatctcatacaagccggtcaag 463
Query: 573 cacgggaggcccggtattggtgccactcactc 604
||||| ||||| ||| ||||||| || |||||
Sbjct: 464 cacggtaggcctggtgttggtgctacccactc 495
>ref|NM_100308.2| Arabidopsis thaliana RPS15 (RIBOSOMAL PROTEIN S15); structural
constituent of ribosome AT1G04270 (RPS15) transcript
variant AT1G04270.1 mRNA, complete cds
Length = 798
Score = 159 bits (80), Expect = 9e-037
Identities = 224/272 (82%)
Strand = Plus / Plus
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||||||| |||||||| ||||| || || ||||||||| | || ||||||| ||| ||
Sbjct: 254 ggtttgacaaggaagccaatggctctgattaagaagctgaggaaagcgaaaagggaggca 313
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| || ||||||||||| ||||||| ||||| | | ||||||||||| |||||
Sbjct: 314 ccacaaggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccct 373
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|| |||||||| ||||| |||| || ||||| || ||||| ||||||||||||||||||
Sbjct: 374 gaaatgattggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatc 433
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||||||||||||||| ||||| || || |||||||| || || |||||||||||||||
Sbjct: 434 aagcctgagatgattggtcactacctggctgagttctctatctcatacaagccggtcaag 493
Query: 573 cacgggaggcccggtattggtgccactcactc 604
||||| ||||| ||| ||||||| || |||||
Sbjct: 494 cacggtaggcctggtgttggtgctacccactc 525
>gb|AV530843.1|AV530843 AV530843 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB010d01F 3', mRNA sequence
Length = 508
Score = 157 bits (79), Expect = 4e-036
Identities = 172/203 (84%)
Strand = Plus / Minus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | ||||||||||| ||||| || ||||||
Sbjct: 465 gagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccctgaaatgatt 406
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| |||| || ||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 405 ggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatcaagcctgag 346
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| ||||| || || |||||||| || || |||||||||||||||||||| |||
Sbjct: 345 atgattggtcactacctggctgagttctctatctcatacaagccggtcaagcacggtagg 286
Query: 582 cccggtattggtgccactcactc 604
|| ||| ||||||| || |||||
Sbjct: 285 cctggtgttggtgctacccactc 263
>gb|BP563336.1|BP563336 BP563336 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-01-O20 3',
mRNA sequence
Length = 431
Score = 157 bits (79), Expect = 4e-036
Identities = 172/203 (84%)
Strand = Plus / Minus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | ||||||||||| ||||| || ||||||
Sbjct: 412 gagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccctgaaatgatt 353
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| |||| || ||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 352 ggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatcaagcctgag 293
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| ||||| || || |||||||| || || |||||||||||||||||||| |||
Sbjct: 292 atgattggtcactacctggctgagttctctatctcatacaagccggtcaagcacggtagg 233
Query: 582 cccggtattggtgccactcactc 604
|| ||| ||||||| || |||||
Sbjct: 232 cctggtgttggtgctacccactc 210
>gb|BP571507.1|BP571507 BP571507 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-76-I11 3',
mRNA sequence
Length = 461
Score = 157 bits (79), Expect = 4e-036
Identities = 172/203 (84%)
Strand = Plus / Minus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | ||||||||||| ||||| || ||||||
Sbjct: 408 gagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccctgaaatgatt 349
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| |||| || ||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 348 ggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatcaagcctgag 289
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| ||||| || || |||||||| || || |||||||||||||||||||| |||
Sbjct: 288 atgattggtcactacctggctgagttctctatctcatacaagccggtcaagcacggtagg 229
Query: 582 cccggtattggtgccactcactc 604
|| ||| ||||||| || |||||
Sbjct: 228 cctggtgttggtgctacccactc 206
>gb|BP584508.1|BP584508 BP584508 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-46-J23 3',
mRNA sequence
Length = 423
Score = 157 bits (79), Expect = 4e-036
Identities = 172/203 (84%)
Strand = Plus / Minus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | ||||||||||| ||||| || ||||||
Sbjct: 343 gagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccctgaaatgatt 284
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| |||| || ||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 283 ggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatcaagcctgag 224
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| ||||| || || |||||||| || || |||||||||||||||||||| |||
Sbjct: 223 atgattggtcactacctggctgagttctctatctcatacaagccggtcaagcacggtagg 164
Query: 582 cccggtattggtgccactcactc 604
|| ||| ||||||| || |||||
Sbjct: 163 cctggtgttggtgctacccactc 141
>gb|BP593823.1|BP593823 BP593823 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-23-J06 3',
mRNA sequence
Length = 460
Score = 157 bits (79), Expect = 4e-036
Identities = 172/203 (84%)
Strand = Plus / Minus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | ||||||||||| ||||| || ||||||
Sbjct: 408 gagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccctgaaatgatt 349
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| |||| || ||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 348 ggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatcaagcctgag 289
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| ||||| || || |||||||| || || |||||||||||||||||||| |||
Sbjct: 288 atgattggtcactacctggctgagttctctatctcatacaagccggtcaagcacggtagg 229
Query: 582 cccggtattggtgccactcactc 604
|| ||| ||||||| || |||||
Sbjct: 228 cctggtgttggtgctacccactc 206
>gb|BP595618.1|BP595618 BP595618 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-30-N09 3',
mRNA sequence
Length = 427
Score = 157 bits (79), Expect = 4e-036
Identities = 172/203 (84%)
Strand = Plus / Minus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | ||||||||||| ||||| || ||||||
Sbjct: 413 gagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccctgaaatgatt 354
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| |||| || ||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 353 ggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatcaagcctgag 294
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| ||||| || || |||||||| || || |||||||||||||||||||| |||
Sbjct: 293 atgattggtcactacctggctgagttctctatctcatacaagccggtcaagcacggtagg 234
Query: 582 cccggtattggtgccactcactc 604
|| ||| ||||||| || |||||
Sbjct: 233 cctggtgttggtgctacccactc 211
>gb|BP597545.1|BP597545 BP597545 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-40-A07 3',
mRNA sequence
Length = 424
Score = 157 bits (79), Expect = 4e-036
Identities = 172/203 (84%)
Strand = Plus / Minus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | ||||||||||| ||||| || ||||||
Sbjct: 408 gagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccctgaaatgatt 349
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| |||| || ||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 348 ggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatcaagcctgag 289
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| ||||| || || |||||||| || || |||||||||||||||||||| |||
Sbjct: 288 atgattggtcactacctggctgagttctctatctcatacaagccggtcaagcacggtagg 229
Query: 582 cccggtattggtgccactcactc 604
|| ||| ||||||| || |||||
Sbjct: 228 cctggtgttggtgctacccactc 206
>gb|BP607962.1|BP607962 BP607962 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-76-N23 3',
mRNA sequence
Length = 429
Score = 157 bits (79), Expect = 4e-036
Identities = 172/203 (84%)
Strand = Plus / Minus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | ||||||||||| ||||| || ||||||
Sbjct: 332 gagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccctgaaatgatt 273
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| |||| || ||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 272 ggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatcaagcctgag 213
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| ||||| || || |||||||| || || |||||||||||||||||||| |||
Sbjct: 212 atgattggtcactacctggctgagttctctatctcatacaagccggtcaagcacggtagg 153
Query: 582 cccggtattggtgccactcactc 604
|| ||| ||||||| || |||||
Sbjct: 152 cctggtgttggtgctacccactc 130
>gb|BP638304.1|BP638304 BP638304 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-09-B11 3',
mRNA sequence
Length = 415
Score = 157 bits (79), Expect = 4e-036
Identities = 172/203 (84%)
Strand = Plus / Minus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | ||||||||||| ||||| || ||||||
Sbjct: 408 gagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccctgaaatgatt 349
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| |||| || ||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 348 ggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatcaagcctgag 289
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| ||||| || || |||||||| || || |||||||||||||||||||| |||
Sbjct: 288 atgattggtcactacctggctgagttctctatctcatacaagccggtcaagcacggtagg 229
Query: 582 cccggtattggtgccactcactc 604
|| ||| ||||||| || |||||
Sbjct: 228 cctggtgttggtgctacccactc 206
>gb|BP787497.1|BP787497 BP787497 RAFL7 Arabidopsis thaliana cDNA clone RAFL26-04-I04 3',
mRNA sequence
Length = 429
Score = 157 bits (79), Expect = 4e-036
Identities = 172/203 (84%)
Strand = Plus / Minus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | ||||||||||| ||||| || ||||||
Sbjct: 402 gagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccctgaaatgatt 343
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| |||| || ||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 342 ggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatcaagcctgag 283
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| ||||| || || |||||||| || || |||||||||||||||||||| |||
Sbjct: 282 atgattggtcactacctggctgagttctctatctcatacaagccggtcaagcacggtagg 223
Query: 582 cccggtattggtgccactcactc 604
|| ||| ||||||| || |||||
Sbjct: 222 cctggtgttggtgctacccactc 200
>gb|BP789183.1|BP789183 BP789183 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-37-E15 3',
mRNA sequence
Length = 418
Score = 157 bits (79), Expect = 4e-036
Identities = 172/203 (84%)
Strand = Plus / Minus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | ||||||||||| ||||| || ||||||
Sbjct: 402 gagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccctgaaatgatt 343
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| |||| || ||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 342 ggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatcaagcctgag 283
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| ||||| || || |||||||| || || |||||||||||||||||||| |||
Sbjct: 282 atgattggtcactacctggctgagttctctatctcatacaagccggtcaagcacggtagg 223
Query: 582 cccggtattggtgccactcactc 604
|| ||| ||||||| || |||||
Sbjct: 222 cctggtgttggtgctacccactc 200
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 157 bits (79), Expect = 4e-036
Identities = 172/203 (84%)
Strand = Plus / Minus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | ||||||||||| ||||| || ||||||
Sbjct: 1142154 gagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccctgaaatgatt 1142095
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| |||| || ||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 1142094 ggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatcaagcctgag 1142035
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| ||||| || || |||||||| || || |||||||||||||||||||| |||
Sbjct: 1142034 atgattggtcactacctggctgagttctctatctcatacaagccggtcaagcacggtagg 1141975
Query: 582 cccggtattggtgccactcactc 604
|| ||| ||||||| || |||||
Sbjct: 1141974 cctggtgttggtgctacccactc 1141952
Score = 46.1 bits (23), Expect = 0.010
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 249 gtcgacctcgatgcgctgcttgacatgtccaccga 283
||||| ||||||||||| || ||||||||||||||
Sbjct: 12296917 gtcgatctcgatgcgcttctcgacatgtccaccga 12296883
>gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis thaliana chromosome 1, complete
sequence
Length = 107527
Score = 157 bits (79), Expect = 4e-036
Identities = 172/203 (84%)
Strand = Plus / Plus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
||||||||||| ||||||| ||||| | | ||||||||||| ||||| || ||||||
Sbjct: 91125 gagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccctgaaatgatt 91184
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| ||||| |||| || ||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 91185 ggaagcatcattggagtgtacaacggaaagactttcaaccaggttgagatcaagcctgag 91244
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||| ||||| || || |||||||| || || |||||||||||||||||||| |||
Sbjct: 91245 atgattggtcactacctggctgagttctctatctcatacaagccggtcaagcacggtagg 91304
Query: 582 cccggtattggtgccactcactc 604
|| ||| ||||||| || |||||
Sbjct: 91305 cctggtgttggtgctacccactc 91327
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 366,608
Number of Sequences: 1013581
Number of extensions: 366608
Number of successful extensions: 26827
Number of sequences better than 0.5: 165
Number of HSP's better than 0.5 without gapping: 161
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 25424
Number of HSP's gapped (non-prelim): 1312
length of query: 845
length of database: 908,940,872
effective HSP length: 20
effective length of query: 825
effective length of database: 888,669,252
effective search space: 733152132900
effective search space used: 733152132900
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)