BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2542159.2.1
(1231 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BP562751.2|BP562751 BP562751 RAFL14 Arabidopsis thaliana... 125 2e-026
gb|AY070378.1| Arabidopsis thaliana putative Sar1 GTP bindi... 125 2e-026
ref|NM_116121.4| Arabidopsis thaliana GTP binding AT3G62560... 125 2e-026
gb|AY117363.1| Arabidopsis thaliana putative Sar1 GTP bindi... 123 8e-026
gb|BP798611.1|BP798611 BP798611 RAFL14 Arabidopsis thaliana... 107 5e-021
gb|BP865412.1|BP865412 BP865412 RAFL21 Arabidopsis thaliana... 100 1e-018
gb|BP860874.1|BP860874 BP860874 RAFL21 Arabidopsis thaliana... 92 3e-016
gb|BP831232.1|BP831232 BP831232 RAFL19 Arabidopsis thaliana... 86 2e-014
emb|AJ589243.1| Arabidopsis thaliana T-DNA flanking sequenc... 84 7e-014
gb|BP807256.1|BP807256 BP807256 RAFL16 Arabidopsis thaliana... 84 7e-014
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 84 7e-014
gb|CA781972.1|CA781972 008D07AF Infected Arabidopsis Leaf A... 68 4e-009
gb|CB260783.1|CB260783 65-E9408-012-002-B09-t7r MPIZ-ADIS-0... 68 4e-009
gb|AV552901.1|AV552901 AV552901 Arabidopsis thaliana roots ... 68 4e-009
gb|M95795.1|ATHGTPB Arabidopsis thaliana GTP-binding Sarl p... 68 4e-009
gb|AY072220.1| Arabidopsis thaliana putative GTP-binding pr... 68 4e-009
gb|AY096599.1| Arabidopsis thaliana putative GTP-binding pr... 68 4e-009
gb|AY085815.1| Arabidopsis thaliana clone 1854 mRNA, comple... 68 4e-009
ref|NM_104512.2| Arabidopsis thaliana SAR1 (SECRETION-ASSOC... 68 4e-009
gb|CB257839.1|CB257839 44-E011083-014-003-H12-T7R MPIZ-ADIS... 62 2e-007
gb|BP862893.1|BP862893 BP862893 RAFL21 Arabidopsis thaliana... 62 2e-007
gb|CB257018.1|CB257018 51-E010797-027-001-E07-T7R MPIZ-ADIS... 60 1e-006
gb|T04723.1|T04723 770 Lambda-PRL2 Arabidopsis thaliana cDN... 58 4e-006
gb|BP811424.1|BP811424 BP811424 RAFL16 Arabidopsis thaliana... 58 4e-006
gb|BP859844.1|BP859844 BP859844 RAFL21 Arabidopsis thaliana... 58 4e-006
gb|AC069159.8|AC069159 Arabidopsis thaliana chromosome 1 BA... 56 1e-005
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 56 1e-005
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 56 1e-005
gb|AV812558.1|AV812558 AV812558 RAFL9 Arabidopsis thaliana ... 54 6e-005
gb|CB261903.1|CB261903 82-E8879-008-014-C22-pBl2 MPIZ-ADIS-... 54 6e-005
gb|BP589547.1|BP589547 BP589547 RAFL15 Arabidopsis thaliana... 54 6e-005
gb|BP602497.1|BP602497 BP602497 RAFL16 Arabidopsis thaliana... 54 6e-005
gb|BP605301.1|BP605301 BP605301 RAFL16 Arabidopsis thaliana... 54 6e-005
gb|BP634908.1|BP634908 BP634908 RAFL17 Arabidopsis thaliana... 54 6e-005
gb|BP829563.1|BP829563 BP829563 RAFL19 Arabidopsis thaliana... 54 6e-005
gb|BP833088.1|BP833088 BP833088 RAFL19 Arabidopsis thaliana... 54 6e-005
gb|BP841938.1|BP841938 BP841938 RAFL21 Arabidopsis thaliana... 54 6e-005
gb|BP856044.1|BP856044 BP856044 RAFL21 Arabidopsis thaliana... 54 6e-005
gb|AY090921.1| Arabidopsis thaliana putative GTP-binding pr... 54 6e-005
ref|NM_100788.3| Arabidopsis thaliana ATSAR1/ATSARA1A; GTP ... 54 6e-005
gb|BH810290.1|BH810290 SALK_048796 Arabidopsis thaliana TDN... 52 2e-004
gb|CL469873.1|CL469873 SAIL_134_G06.v1 SAIL Collection Arab... 52 2e-004
gb|AI998662.1|AI998662 701546483 A. thaliana, Columbia Col-... 52 2e-004
gb|AV814313.1|AV814313 AV814313 RAFL9 Arabidopsis thaliana ... 52 2e-004
gb|BU636578.1|BU636578 008D06 Infected Arabidopsis Leaf Ara... 52 2e-004
gb|AV543560.1|AV543560 AV543560 Arabidopsis thaliana roots ... 52 2e-004
gb|AV565941.1|AV565941 AV565941 Arabidopsis thaliana green ... 52 2e-004
gb|BP563740.1|BP563740 BP563740 RAFL14 Arabidopsis thaliana... 52 2e-004
gb|BP577556.1|BP577556 BP577556 RAFL14 Arabidopsis thaliana... 52 2e-004
gb|BP597152.1|BP597152 BP597152 RAFL15 Arabidopsis thaliana... 52 2e-004
gb|BP629366.1|BP629366 BP629366 RAFL17 Arabidopsis thaliana... 52 2e-004
gb|BP630184.1|BP630184 BP630184 RAFL17 Arabidopsis thaliana... 52 2e-004
gb|BP638874.1|BP638874 BP638874 RAFL19 Arabidopsis thaliana... 52 2e-004
gb|BP665675.1|BP665675 BP665675 RAFL21 Arabidopsis thaliana... 52 2e-004
gb|BP788428.1|BP788428 BP788428 RAFL7 Arabidopsis thaliana ... 52 2e-004
gb|BP796332.1|BP796332 BP796332 RAFL5 Arabidopsis thaliana ... 52 2e-004
gb|BP838529.1|BP838529 BP838529 RAFL19 Arabidopsis thaliana... 52 2e-004
gb|BP841783.1|BP841783 BP841783 RAFL21 Arabidopsis thaliana... 52 2e-004
gb|BP865390.1|BP865390 BP865390 RAFL21 Arabidopsis thaliana... 52 2e-004
gb|U56929.1|ATU56929 Arabidospis thaliana GTP binding prote... 52 2e-004
gb|AF218257.1|AF218257 Arabidopsis thaliana 12-oxo-phytodie... 52 2e-004
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 52 2e-004
gb|AY065357.1| Arabidopsis thaliana putative SAR1/GTP-bindi... 52 2e-004
gb|AY096699.1| Arabidopsis thaliana putative SAR1/GTP-bindi... 52 2e-004
gb|AY088765.1| Arabidopsis thaliana clone 94610 mRNA, compl... 52 2e-004
gb|AC003114.1|T12M4 Arabidopsis thaliana chromosome 1 BAC T... 52 2e-004
gb|AC006413.4| Arabidopsis thaliana chromosome 2 clone F5K7... 52 2e-004
dbj|AK175307.1| Arabidopsis thaliana mRNA for hypothetical ... 52 2e-004
dbj|AK220632.1| Arabidopsis thaliana mRNA for hypothetical ... 52 2e-004
ref|NM_116440.2| Arabidopsis thaliana ASAR1; GTP binding AT... 52 2e-004
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 52 2e-004
gb|BP563380.1|BP563380 BP563380 RAFL14 Arabidopsis thaliana... 50 0.001
gb|BP605925.1|BP605925 BP605925 RAFL16 Arabidopsis thaliana... 50 0.001
gb|BP831684.1|BP831684 BP831684 RAFL19 Arabidopsis thaliana... 50 0.001
gb|CB255669.1|CB255669 27-E010904-027-001-E07-T7R MPIZ-ADIS... 48 0.004
gb|AV557170.1|AV557170 AV557170 Arabidopsis thaliana green ... 48 0.004
gb|BP568830.1|BP568830 BP568830 RAFL14 Arabidopsis thaliana... 48 0.004
gb|BP629609.1|BP629609 BP629609 RAFL17 Arabidopsis thaliana... 48 0.004
gb|BP632584.1|BP632584 BP632584 RAFL17 Arabidopsis thaliana... 48 0.004
gb|BP857027.1|BP857027 BP857027 RAFL21 Arabidopsis thaliana... 48 0.004
gb|H37623.1|H37623 15752 Lambda-PRL2 Arabidopsis thaliana c... 46 0.014
gb|AV784174.1|AV784174 AV784174 RAFL5 Arabidopsis thaliana ... 46 0.014
gb|BP566240.1|BP566240 BP566240 RAFL14 Arabidopsis thaliana... 46 0.014
gb|BP595832.1|BP595832 BP595832 RAFL15 Arabidopsis thaliana... 46 0.014
gb|BP824789.1|BP824789 BP824789 RAFL19 Arabidopsis thaliana... 46 0.014
gb|BP837618.1|BP837618 BP837618 RAFL19 Arabidopsis thaliana... 46 0.014
emb|AX059503.1| Sequence 236 from Patent WO0055325 46 0.014
emb|AX059522.1| Sequence 255 from Patent WO0055325 46 0.014
gb|AY074564.1| Arabidopsis thaliana At1g24120/F3I6_4 mRNA, ... 46 0.014
gb|AY091053.1| Arabidopsis thaliana unknown protein (At5g25... 46 0.014
gb|AY133786.1| Arabidopsis thaliana clone U19101 unknown pr... 46 0.014
gb|AY226825.1| Arabidopsis thaliana ARG1-like protein 1 (AR... 46 0.014
gb|AC002396.1| Arabidopsis thaliana chromosome I BAC F3I6 g... 46 0.014
gb|AC006601.1|AC006601 Arabidopsis thaliana chromosome V ma... 46 0.014
gb|AC004483.3| Arabidopsis thaliana chromosome 2 clone T12J... 46 0.014
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 46 0.014
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 46 0.014
emb|AL133292.3|ATF13I12 Arabidopsis thaliana DNA chromosome... 46 0.014
ref|NM_114580.1| Arabidopsis thaliana unknown protein AT3G4... 46 0.014
ref|NM_122470.2| Arabidopsis thaliana unknown protein AT5G2... 46 0.014
ref|NM_102258.3| Arabidopsis thaliana ARL1; heat shock prot... 46 0.014
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 46 0.014
gb|BH242632.1|BH242632 AUITF10TF AUIT Arabidopsis thaliana ... 44 0.057
gb|CL478070.1|CL478070 SAIL_284_G09.v2 SAIL Collection Arab... 44 0.057
gb|T88471.1|T88471 12167 Lambda-PRL2 Arabidopsis thaliana c... 44 0.057
gb|AI993456.1|AI993456 701496370 A. thaliana, Ohio State cl... 44 0.057
gb|AV822089.1|AV822089 AV822089 RAFL4 Arabidopsis thaliana ... 44 0.057
gb|CB257019.1|CB257019 51-E010846-027-001-E07-spP1 MPIZ-ADI... 44 0.057
gb|BP568948.1|BP568948 BP568948 RAFL14 Arabidopsis thaliana... 44 0.057
gb|BP610173.1|BP610173 BP610173 RAFL16 Arabidopsis thaliana... 44 0.057
gb|BP623732.1|BP623732 BP623732 RAFL17 Arabidopsis thaliana... 44 0.057
gb|BP624191.1|BP624191 BP624191 RAFL17 Arabidopsis thaliana... 44 0.057
gb|BP626257.1|BP626257 BP626257 RAFL17 Arabidopsis thaliana... 44 0.057
gb|BP657937.1|BP657937 BP657937 RAFL19 Arabidopsis thaliana... 44 0.057
gb|BP799111.1|BP799111 BP799111 RAFL14 Arabidopsis thaliana... 44 0.057
gb|BP826225.1|BP826225 BP826225 RAFL19 Arabidopsis thaliana... 44 0.057
gb|BP851828.1|BP851828 BP851828 RAFL21 Arabidopsis thaliana... 44 0.057
gb|DR749858.1|DR749858 89-L020913-065-003-A12-SeLA MPIZ-ADI... 44 0.057
gb|DR749859.1|DR749859 89-L020914-065-003-A12-SeLB MPIZ-ADI... 44 0.057
gb|AF013294.1|TM018A10 Arabidopsis thaliana BAC TM018A10 44 0.057
gb|AF389279.1|AF389279 Arabidopsis thaliana AT5g66540/K1F13... 44 0.057
gb|AF412102.1|AF412102 Arabidopsis thaliana At1g76010/T4O12... 44 0.057
gb|AY054208.1| Arabidopsis thaliana At1g76010/T4O12_22 mRNA... 44 0.057
gb|AF428441.1|AF428441 Arabidopsis thaliana At1g76010/T4O12... 44 0.057
dbj|E52178.1| Homeobox gene encoding protein participating ... 44 0.057
gb|AY124847.1| Arabidopsis thaliana At1g76010/T4O12_22 mRNA... 44 0.057
dbj|BD012131.1| Homeobox gene coding for protein participat... 44 0.057
gb|AY072204.1| Arabidopsis thaliana unknown protein (At4g00... 44 0.057
gb|AY096708.1| Arabidopsis thaliana unknown protein (At4g00... 44 0.057
gb|AY149928.1| Arabidopsis thaliana At5g66540/K1F13_21 mRNA... 44 0.057
gb|BT005296.1| Arabidopsis thaliana At2g33880 mRNA, complet... 44 0.057
gb|AY251401.1| Arabidopsis thaliana WOX9 protein mRNA, comp... 44 0.057
gb|AC007396.6|AC007396 Genomic sequence for Arabidopsis tha... 44 0.057
gb|U78721.3| Arabidopsis thaliana chromosome 2 clone T1B8 m... 44 0.057
emb|BX827737.1|CNS0A32X Arabidopsis thaliana Full-length cD... 44 0.057
emb|BX827522.1|CNS0A48W Arabidopsis thaliana Full-length cD... 44 0.057
emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, shor... 44 0.057
dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosom... 44 0.057
dbj|AK118501.1| Arabidopsis thaliana At2g33880 mRNA for put... 44 0.057
emb|CQ803666.1| Sequence 77 from Patent WO2004035798 44 0.057
emb|CQ804366.1| Sequence 777 from Patent WO2004035798 44 0.057
emb|AL161491.2|ATCHRIV3 Arabidopsis thaliana DNA chromosome... 44 0.057
ref|NM_126052.1| Arabidopsis thaliana unknown protein AT5G6... 44 0.057
ref|NM_128948.2| Arabidopsis thaliana WOX9 (STIMPY); transc... 44 0.057
ref|NM_106249.2| Arabidopsis thaliana unknown protein AT1G7... 44 0.057
ref|NM_116327.4| Arabidopsis thaliana transcription factor ... 44 0.057
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 44 0.057
gb|B09657.1|B09657 T1P3-Sp6 TAMU Arabidopsis thaliana genom... 42 0.22
gb|BH610651.1|BH610651 SALK_017801 Arabidopsis thaliana TDN... 42 0.22
gb|H37002.1|H37002 15131 Lambda-PRL2 Arabidopsis thaliana c... 42 0.22
gb|AU226742.1|AU226742 AU226742 RAFL14 Arabidopsis thaliana... 42 0.22
gb|AV823232.1|AV823232 AV823232 RAFL5 Arabidopsis thaliana ... 42 0.22
gb|AV824463.1|AV824463 AV824463 RAFL6 Arabidopsis thaliana ... 42 0.22
gb|AU237061.1|AU237061 AU237061 RAFL15 Arabidopsis thaliana... 42 0.22
gb|AU237887.1|AU237887 AU237887 RAFL16 Arabidopsis thaliana... 42 0.22
gb|BX841235.1|BX841235 BX841235 Arabidopsis thaliana Flower... 42 0.22
gb|AV541755.1|AV541755 AV541755 Arabidopsis thaliana roots ... 42 0.22
gb|BP595235.1|BP595235 BP595235 RAFL15 Arabidopsis thaliana... 42 0.22
gb|BP787073.1|BP787073 BP787073 RAFL7 Arabidopsis thaliana ... 42 0.22
gb|BP825320.1|BP825320 BP825320 RAFL19 Arabidopsis thaliana... 42 0.22
gb|BP837332.1|BP837332 BP837332 RAFL19 Arabidopsis thaliana... 42 0.22
gb|BP857366.1|BP857366 BP857366 RAFL21 Arabidopsis thaliana... 42 0.22
emb|AL049803.1|F26K10 Arabidopsis thaliana clone F26K10, **... 42 0.22
gb|AF276887.1|AF276887 Arabidopsis thaliana UMP synthase (U... 42 0.22
gb|AY074561.1| Arabidopsis thaliana At1g62830/F23N19_19 mRN... 42 0.22
gb|AY143912.1| Arabidopsis thaliana At1g62830/F23N19_19 mRN... 42 0.22
gb|BT002013.1| Arabidopsis thaliana spliceosome associated ... 42 0.22
gb|BT003969.1| Arabidopsis thaliana clone RAFL15-46-E08 (R2... 42 0.22
gb|AY088175.1| Arabidopsis thaliana clone 42528 mRNA, compl... 42 0.22
gb|AY088835.1| Arabidopsis thaliana clone 96705 mRNA, compl... 42 0.22
gb|BT010557.1| Arabidopsis thaliana At4g21660 gene, complet... 42 0.22
gb|U89959.1| Arabidopsis thaliana BAC T7I23, complete sequence 42 0.22
gb|AF069716.1|AF069716 Arabidopsis Thaliana BAC F6A4, Chrom... 42 0.22
gb|AC004392.1|F8K4 Arabidopsis thaliana chromosome 1 BAC F8... 42 0.22
gb|AC007190.4|AC007190 Genomic sequence for Arabidopsis tha... 42 0.22
emb|BX829362.1|CNS0A2N9 Arabidopsis thaliana Full-length cD... 42 0.22
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 42 0.22
dbj|AK117106.1| Arabidopsis thaliana At4g28190 mRNA for unk... 42 0.22
gb|BT020475.1| Arabidopsis thaliana At5g24890 gene, complet... 42 0.22
emb|AL035527.1|ATF17L22 Arabidopsis thaliana DNA chromosome... 42 0.22
emb|AL138658.1|ATT2O9 Arabidopsis thaliana DNA chromosome 3... 42 0.22
emb|AL161555.2|ATCHRIV55 Arabidopsis thaliana DNA chromosom... 42 0.22
emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosom... 42 0.22
emb|AL163852.1|ATF27H5 Arabidopsis thaliana DNA chromosome ... 42 0.22
emb|AL138656.2|ATT14E10 Arabidopsis thaliana DNA chromosome... 42 0.22
gb|BT023742.1| Arabidopsis thaliana At5g24890 gene, complet... 42 0.22
ref|NM_100084.1| Arabidopsis thaliana nucleic acid binding ... 42 0.22
ref|NM_118286.2| Arabidopsis thaliana unknown protein AT4G2... 42 0.22
ref|NM_122398.2| Arabidopsis thaliana unknown protein AT5G2... 42 0.22
ref|NM_104961.3| Arabidopsis thaliana amine oxidase/ oxidor... 42 0.22
ref|NM_118959.3| Arabidopsis thaliana ULT1 (ULTRAPETALA1); ... 42 0.22
>gb|BP562751.2|BP562751 BP562751 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-55-C04 5',
mRNA sequence
Length = 589
Score = 125 bits (63), Expect = 2e-026
Identities = 336/427 (78%)
Strand = Plus / Plus
Query: 148 gatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagga 207
||||||||||||||| ||||||||||| || |||||| | || || || |||||||| ||
Sbjct: 61 gatgttcctggtggattggttctatggagttctggcaactctgggactatggcagaaaga 120
Query: 208 ggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgct 267
|| ||||| || || || || ||||||||||||||||| |||||| | || |||||| |
Sbjct: 121 agcgaagattctgtttctaggtctcgacaacgccggcaaaaccaccttgcttcacatgtt 180
Query: 268 gaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttgag 327
||||||||| | || || ||||| |||||||| ||| | || || || |||||| | ||
Sbjct: 181 aaaggacgagagactggtccagcatcagccgacacagcatccgacatcggaagagcttag 240
Query: 328 catcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgt 387
||||||| ||||||||||| || ||||| | || || || ||||| || || | ||
Sbjct: 241 tatcggcaaaatcaagttcaaagccttcgatttgggaggtcatcagattgctcgtagagt 300
Query: 388 ctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaa 447
|||||||||||| ||||| ||||||||||| || || ||| | || ||||| ||||||
Sbjct: 301 ctggaaggactattacgctaaggttgatgcagtggtatacctagttgatgcatatgacaa 360
Query: 448 ggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgc 507
|| | ||||| || || ||||| ||||| || || ||||| | ||||| ||||| ||
Sbjct: 361 agagaggtttgcagaatcaaagaaagagcttgacgctcttctctctgatgaatccctagc 420
Query: 508 aaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagagga 567
||| || ||||||||||| || || ||||| || ||||| || ||||| || ||||| ||
Sbjct: 421 aaatgtccctttcctcatccttggaaacaaaatcgacattccgtacgctgcatcagaaga 480
Query: 568 ggagctg 574
||||||
Sbjct: 481 cgagctg 487
>gb|AY070378.1| Arabidopsis thaliana putative Sar1 GTP binding protein (At3g62560)
mRNA, complete cds
Length = 795
Score = 125 bits (63), Expect = 2e-026
Identities = 336/427 (78%)
Strand = Plus / Plus
Query: 148 gatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagga 207
||||||||||||||| ||||||||||| || |||||| | || || || |||||||| ||
Sbjct: 56 gatgttcctggtggattggttctatggagttctggcaactctgggactatggcagaaaga 115
Query: 208 ggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgct 267
|| ||||| || || || || ||||||||||||||||| |||||| | || |||||| |
Sbjct: 116 agcgaagattctgtttctaggtctcgacaacgccggcaaaaccaccttgcttcacatgtt 175
Query: 268 gaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttgag 327
||||||||| | || || ||||| |||||||| ||| | || || || |||||| | ||
Sbjct: 176 aaaggacgagagactggtccagcatcagccgacacagcatccgacatcggaagagcttag 235
Query: 328 catcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgt 387
||||||| ||||||||||| || ||||| | || || || ||||| || || | ||
Sbjct: 236 tatcggcaaaatcaagttcaaagccttcgatttgggaggtcatcagattgctcgtagagt 295
Query: 388 ctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaa 447
|||||||||||| ||||| ||||||||||| || || ||| | || ||||| ||||||
Sbjct: 296 ctggaaggactattacgctaaggttgatgcagtggtatacctagttgatgcatatgacaa 355
Query: 448 ggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgc 507
|| | ||||| || || ||||| ||||| || || ||||| | ||||| ||||| ||
Sbjct: 356 agagaggtttgcagaatcaaagaaagagcttgacgctcttctctctgatgaatccctagc 415
Query: 508 aaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagagga 567
||| || ||||||||||| || || ||||| || ||||| || ||||| || ||||| ||
Sbjct: 416 aaatgtccctttcctcatccttggaaacaaaatcgacattccgtacgctgcatcagaaga 475
Query: 568 ggagctg 574
||||||
Sbjct: 476 cgagctg 482
>ref|NM_116121.4| Arabidopsis thaliana GTP binding AT3G62560 mRNA, complete cds
Length = 803
Score = 125 bits (63), Expect = 2e-026
Identities = 336/427 (78%)
Strand = Plus / Plus
Query: 148 gatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagga 207
||||||||||||||| ||||||||||| || |||||| | || || || |||||||| ||
Sbjct: 56 gatgttcctggtggattggttctatggagttctggcaactctgggactatggcagaaaga 115
Query: 208 ggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgct 267
|| ||||| || || || || ||||||||||||||||| |||||| | || |||||| |
Sbjct: 116 agcgaagattctgtttctaggtctcgacaacgccggcaaaaccaccttgcttcacatgtt 175
Query: 268 gaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttgag 327
||||||||| | || || ||||| |||||||| ||| | || || || |||||| | ||
Sbjct: 176 aaaggacgagagactggtccagcatcagccgacacagcatccgacatcggaagagcttag 235
Query: 328 catcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgt 387
||||||| ||||||||||| || ||||| | || || || ||||| || || | ||
Sbjct: 236 tatcggcaaaatcaagttcaaagccttcgatttgggaggtcatcagattgctcgtagagt 295
Query: 388 ctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaa 447
|||||||||||| ||||| ||||||||||| || || ||| | || ||||| ||||||
Sbjct: 296 ctggaaggactattacgctaaggttgatgcagtggtatacctagttgatgcatatgacaa 355
Query: 448 ggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgc 507
|| | ||||| || || ||||| ||||| || || ||||| | ||||| ||||| ||
Sbjct: 356 agagaggtttgcagaatcaaagaaagagcttgacgctcttctctctgatgaatccctagc 415
Query: 508 aaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagagga 567
||| || ||||||||||| || || ||||| || ||||| || ||||| || ||||| ||
Sbjct: 416 aaatgtccctttcctcatccttggaaacaaaatcgacattccgtacgctgcatcagaaga 475
Query: 568 ggagctg 574
||||||
Sbjct: 476 cgagctg 482
>gb|AY117363.1| Arabidopsis thaliana putative Sar1 GTP binding protein (At3g62560)
mRNA, complete cds
Length = 613
Score = 123 bits (62), Expect = 8e-026
Identities = 335/426 (78%)
Strand = Plus / Plus
Query: 149 atgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaaggag 208
|||||||||||||| ||||||||||| || |||||| | || || || |||||||| ||
Sbjct: 1 atgttcctggtggattggttctatggagttctggcaactctgggactatggcagaaagaa 60
Query: 209 gctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgctg 268
|| ||||| || || || || ||||||||||||||||| |||||| | || |||||| |
Sbjct: 61 gcgaagattctgtttctaggtctcgacaacgccggcaaaaccaccttgcttcacatgtta 120
Query: 269 aaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttgagc 328
||||||||| | || || ||||| |||||||| ||| | || || || |||||| | ||
Sbjct: 121 aaggacgagagactggtccagcatcagccgacacagcatccgacatcggaagagcttagt 180
Query: 329 atcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtc 388
||||||| ||||||||||| || ||||| | || || || ||||| || || | |||
Sbjct: 181 atcggcaaaatcaagttcaaagccttcgatttgggaggtcatcagattgctcgtagagtc 240
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaag 448
||||||||||| ||||| ||||||||||| || || ||| | || ||||| ||||||
Sbjct: 241 tggaaggactattacgctaaggttgatgcagtggtatacctagttgatgcatatgacaaa 300
Query: 449 gaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgca 508
|| | ||||| || || ||||| ||||| || || ||||| | ||||| ||||| |||
Sbjct: 301 gagaggtttgcagaatcaaagaaagagcttgacgctcttctctctgatgaatccctagca 360
Query: 509 aacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggag 568
|| || ||||||||||| || || ||||| || ||||| || ||||| || ||||| ||
Sbjct: 361 aatgtccctttcctcatccttggaaacaaaatcgacattccgtacgctgcatcagaagac 420
Query: 569 gagctg 574
||||||
Sbjct: 421 gagctg 426
>gb|BP798611.1|BP798611 BP798611 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-07-N14 5',
mRNA sequence
Length = 402
Score = 107 bits (54), Expect = 5e-021
Identities = 216/270 (80%)
Strand = Plus / Plus
Query: 148 gatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagga 207
||||||||||||||| ||||||||||| || |||||| | || || || |||||||| ||
Sbjct: 55 gatgttcctggtggattggttctatggagttctggcaactctgggactatggcagaaaga 114
Query: 208 ggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgct 267
|| ||||| || || || || ||||||||||||||||| |||||| | || |||||| |
Sbjct: 115 agcgaagattctgtttctaggtctcgacaacgccggcaaaaccaccttgcttcacatgtt 174
Query: 268 gaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttgag 327
||||||||| | || || ||||| |||||||| ||| | || || || |||||| | ||
Sbjct: 175 aaaggacgagagactggtccagcatcagccgacacagcatccgacatcggaagagcttag 234
Query: 328 catcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgt 387
||||||| ||||||||||| || ||||| || || || ||||| || || | ||
Sbjct: 235 tatcggcaaaatcaagttcaaagccttcgattggggaggtcatcagatggctcgtagagt 294
Query: 388 ctggaaggactactacgccaaggttgatgc 417
|||||||||||| ||||| |||||||||||
Sbjct: 295 ctggaaggactattacgctaaggttgatgc 324
>gb|BP865412.1|BP865412 BP865412 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-74-B01 5',
mRNA sequence
Length = 369
Score = 99.6 bits (50), Expect = 1e-018
Identities = 216/270 (80%), Gaps = 1/270 (0%)
Strand = Plus / Plus
Query: 148 gatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagga 207
||||||||||||||| ||||||||||| || |||||| | || || || |||||||| ||
Sbjct: 56 gatgttcctggtggattggttctatggagttctggcaactctgggactatggcagaaaga 115
Query: 208 ggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgct 267
|| ||||| || || || || ||||||||||||||||| |||||| | || ||||| |
Sbjct: 116 agcgaagattctgtttctaggtctcgacaacgccggcaaaaccaccttgct-tacatgtt 174
Query: 268 gaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttgag 327
||||||||| | || || ||||| |||||||| ||| | || || || |||||| | ||
Sbjct: 175 aaaggacgagagactggtccagcatcagccgacacagcatccgacatcggaagagcttag 234
Query: 328 catcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgt 387
||||||| ||||||||||| || ||||| | || || || ||||| || || | ||
Sbjct: 235 tatcggcaaaatcaagttcaaagccttcgatttgggaggtcatcagattgctcgtagagt 294
Query: 388 ctggaaggactactacgccaaggttgatgc 417
|||||||||||| ||||| |||||||||||
Sbjct: 295 ctggaaggactattacgctaaggttgatgc 324
>gb|BP860874.1|BP860874 BP860874 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-45-J01 5',
mRNA sequence
Length = 375
Score = 91.7 bits (46), Expect = 3e-016
Identities = 214/270 (79%)
Strand = Plus / Plus
Query: 148 gatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagga 207
||||||||||||||| ||||||||||| || |||||| | || || || |||||||| ||
Sbjct: 55 gatgttcctggtggattggttctatggagttctggcaactctgggactatggcagaaaga 114
Query: 208 ggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgct 267
|| ||||| || || || || ||||||||||||||||| |||||| | || |||||| |
Sbjct: 115 agcgaagattctgtttctaggtctcgacaacgccggcaaaaccaccttgcttcacatgtt 174
Query: 268 gaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttgag 327
||||||||| | || || ||||| |||||||| ||| | || | || |||||| | ||
Sbjct: 175 aaaggacgagagactggtccagcatcagccgacacagcatccgatatcggaagagcttag 234
Query: 328 catcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgt 387
||||||| ||||||||||| || || || || || || ||||| || || | ||
Sbjct: 235 tatcggcaaaatcaagttcaaagccttggattggggaggtcatcagattgctcgtagagt 294
Query: 388 ctggaaggactactacgccaaggttgatgc 417
|||||||||||| ||||| |||||||||||
Sbjct: 295 ctggaaggactattacgctaaggttgatgc 324
>gb|BP831232.1|BP831232 BP831232 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-88-F18 5',
mRNA sequence
Length = 414
Score = 85.7 bits (43), Expect = 2e-014
Identities = 215/271 (79%), Gaps = 1/271 (0%)
Strand = Plus / Plus
Query: 148 gatgttcctggtggactggttctatggggtgctggcatcgcttggg-ctgtggcagaagg 206
||||||||||||||| |||||||||| || |||||| | |||| || |||||||| |
Sbjct: 86 gatgttcctggtggatgggttctatggagttctggcaacctctgggactatggcagaaag 145
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
| || ||||| || || || || ||||||||||||||||| |||||| | || ||||||
Sbjct: 146 aagcgaagattctgtttctaggtctcgacaacgccggcaaaaccaccttgcttcacatgt 205
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| ||||||||| | | || ||||| |||||||| ||| | || || || |||||| | |
Sbjct: 206 taaaggacgagagagtggtccagcatcagccgacacagcatccgacatcggaagagctta 265
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
| ||||||| ||||||||||| || ||||| | || || || ||||| || || | |
Sbjct: 266 gtatcggcaaaatcaagttcaaagccttcgatttgggaggtcatcagattgctcgtagag 325
Query: 387 tctggaaggactactacgccaaggttgatgc 417
||||||||||||| ||||| |||||||||||
Sbjct: 326 tctggaaggactattacgctaaggttgatgc 356
>emb|AJ589243.1| Arabidopsis thaliana T-DNA flanking sequence, right border, clone
547A09, genomic survey sequence
Length = 888
Score = 83.8 bits (42), Expect = 7e-014
Identities = 108/130 (83%)
Strand = Plus / Plus
Query: 148 gatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagga 207
||||||||||||||| ||||||||||| || |||||| | || || || |||||||| ||
Sbjct: 198 gatgttcctggtggattggttctatggagttctggcaactctgggactatggcagaaaga 257
Query: 208 ggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgct 267
|| ||||| || || || || ||||||||||||||||| |||||| | || |||||| |
Sbjct: 258 agcgaagattctgtttctaggtctcgacaacgccggcaaaaccaccttgcttcacatgtt 317
Query: 268 gaaggacgag 277
|||||||||
Sbjct: 318 aaaggacgag 327
>gb|BP807256.1|BP807256 BP807256 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-13-B03 5',
mRNA sequence
Length = 399
Score = 83.8 bits (42), Expect = 7e-014
Identities = 108/130 (83%)
Strand = Plus / Plus
Query: 148 gatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagga 207
||||||||||||||| ||||||||||| || |||||| | || || || |||||||| ||
Sbjct: 53 gatgttcctggtggattggttctatggagttctggcaactctgggactatggcagaaaga 112
Query: 208 ggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgct 267
|| ||||| || || || || ||||||||||||||||| |||||| | || |||||| |
Sbjct: 113 agcgaagattctgtttctaggtctcgacaacgccggcaaaaccaccttgcttcacatgtt 172
Query: 268 gaaggacgag 277
|||||||||
Sbjct: 173 aaaggacgag 182
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 83.8 bits (42), Expect = 7e-014
Identities = 108/130 (83%)
Strand = Plus / Plus
Query: 148 gatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagga 207
||||||||||||||| ||||||||||| || |||||| | || || || |||||||| ||
Sbjct: 23148514 gatgttcctggtggattggttctatggagttctggcaactctgggactatggcagaaaga 23148573
Query: 208 ggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgct 267
|| ||||| || || || || ||||||||||||||||| |||||| | || |||||| |
Sbjct: 23148574 agcgaagattctgtttctaggtctcgacaacgccggcaaaaccaccttgcttcacatgtt 23148633
Query: 268 gaaggacgag 277
|||||||||
Sbjct: 23148634 aaaggacgag 23148643
Score = 46.1 bits (23), Expect = 0.014
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 106 gaagaggaagaggaagaggaaga 128
|||||||||||||||||||||||
Sbjct: 17365061 gaagaggaagaggaagaggaaga 17365039
Score = 42.1 bits (21), Expect = 0.22
Identities = 66/81 (81%)
Strand = Plus / Plus
Query: 494 gatgactcccttgcaaacgttcctttcctcatactgggcaacaagattgacatcccatac 553
||||| ||||| ||||| || ||||||||||| || || ||||| || ||||| || |||
Sbjct: 23149620 gatgaatccctagcaaatgtccctttcctcatccttggaaacaaaatcgacattccgtac 23149679
Query: 554 gcggcttcagaggaggagctg 574
|| || ||||| || ||||||
Sbjct: 23149680 gctgcatcagaagacgagctg 23149700
Score = 42.1 bits (21), Expect = 0.22
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 agaggaagaggaagaggaaga 128
|||||||||||||||||||||
Sbjct: 22244192 agaggaagaggaagaggaaga 22244212
Score = 42.1 bits (21), Expect = 0.22
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 512 gttcctttcctcatactgggcaaca 536
|||||||| ||||||||||||||||
Sbjct: 20182810 gttccttttctcatactgggcaaca 20182786
>gb|CA781972.1|CA781972 008D07AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 783
Score = 67.9 bits (34), Expect = 4e-009
Identities = 262/338 (77%)
Strand = Plus / Plus
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaag 448
||||| || ||||| |||||||||||||||||||| ||| | ||||||||| ||||||
Sbjct: 299 tggaaagattactatgccaaggttgatgctgttgtctaccttgtggatgcttatgacaaa 358
Query: 449 gaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgca 508
||| | ||||| ||||| || | ||||| ||||| ||||| | ||||| ||||||||
Sbjct: 359 gaaagatttgcagagtcaaaaagagagcttgatgctcttctctcggatgaagcccttgca 418
Query: 509 aacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggag 568
| || || || || || || || ||||||||||| ||||| || || ||||| || ||
Sbjct: 419 actgtcccgtttctgattcttgggaacaagattgatatcccttatgcagcttctgaagac 478
Query: 569 gagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaacttg 628
|| |||||||| || | || || | |||||||| ||||| |||||||| |||| |
Sbjct: 479 gaactgaggtatcacttgggtctcactaacttcaccaccggtaagggcaaagtgacgctc 538
Query: 629 gccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggc 688
| ||||| ||| || || || ||| ||||||||||||| | || || || |||||
Sbjct: 539 ggagactctggtgttcgcccacttgaggtcttcatgtgcagcattgtccgtaaaatgggt 598
Query: 689 tatggcgaaggcttcaaatggatgtctcagtacatcaa 726
|||||||| || ||||||||| | ||||||||||||||
Sbjct: 599 tatggcgagggattcaaatggctctctcagtacatcaa 636
>gb|CB260783.1|CB260783 65-E9408-012-002-B09-t7r MPIZ-ADIS-012 Arabidopsis thaliana cDNA
clone MPIZp769B092Q 5-PRIME, mRNA sequence
Length = 653
Score = 67.9 bits (34), Expect = 4e-009
Identities = 262/338 (77%)
Strand = Plus / Plus
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaag 448
||||| || ||||| |||||||||||||||||||| ||| | ||||||||| ||||||
Sbjct: 297 tggaaagattactatgccaaggttgatgctgttgtctaccttgtggatgcttatgacaaa 356
Query: 449 gaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgca 508
||| | ||||| ||||| || | ||||| ||||| ||||| | ||||| ||||||||
Sbjct: 357 gaaagatttgcagagtcaaaaagagagcttgatgctcttctctcggatgaagcccttgca 416
Query: 509 aacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggag 568
| || || || || || || || ||||||||||| ||||| || || ||||| || ||
Sbjct: 417 actgtcccgtttctgattcttgggaacaagattgatatcccttatgcagcttctgaagac 476
Query: 569 gagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaacttg 628
|| |||||||| || | || || | |||||||| ||||| |||||||| |||| |
Sbjct: 477 gaactgaggtatcacttgggtctcactaacttcaccaccggtaagggcaaagtgacgctc 536
Query: 629 gccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggc 688
| ||||| ||| || || || ||| ||||||||||||| | || || || |||||
Sbjct: 537 ggagactctggtgttcgcccacttgaggtcttcatgtgcagcattgtccgtaaaatgggt 596
Query: 689 tatggcgaaggcttcaaatggatgtctcagtacatcaa 726
|||||||| || ||||||||| | ||||||||||||||
Sbjct: 597 tatggcgagggattcaaatggctctctcagtacatcaa 634
>gb|AV552901.1|AV552901 AV552901 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ48d11R 5', mRNA sequence
Length = 572
Score = 67.9 bits (34), Expect = 4e-009
Identities = 262/338 (77%)
Strand = Plus / Plus
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaag 448
||||| || ||||| |||||||||||||||||||| ||| | ||||||||| ||||||
Sbjct: 219 tggaaagattactatgccaaggttgatgctgttgtctaccttgtggatgcttatgacaaa 278
Query: 449 gaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgca 508
||| | ||||| ||||| || | ||||| ||||| ||||| | ||||| ||||||||
Sbjct: 279 gaaagatttgcagagtcaaaaagagagcttgatgctcttctctcggatgaagcccttgca 338
Query: 509 aacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggag 568
| || || || || || || || ||||||||||| ||||| || || ||||| || ||
Sbjct: 339 actgtcccgtttctgattcttgggaacaagattgatatcccttatgcagcttctgaagac 398
Query: 569 gagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaacttg 628
|| |||||||| || | || || | |||||||| ||||| |||||||| |||| |
Sbjct: 399 gaactgaggtatcacttgggtctcactaacttcaccaccggtaagggcaaagtgacgctc 458
Query: 629 gccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggc 688
| ||||| ||| || || || ||| ||||||||||||| | || || || |||||
Sbjct: 459 ggagactctggtgttcgcccacttgaggtcttcatgtgcagcattgtccgtaaaatgggt 518
Query: 689 tatggcgaaggcttcaaatggatgtctcagtacatcaa 726
|||||||| || ||||||||| | ||||||||||||||
Sbjct: 519 tatggcgagggattcaaatggctctctcagtacatcaa 556
>gb|M95795.1|ATHGTPB Arabidopsis thaliana GTP-binding Sarl protein mRNA, complete cds
Length = 905
Score = 67.9 bits (34), Expect = 4e-009
Identities = 262/338 (77%)
Strand = Plus / Plus
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaag 448
||||| || ||||| |||||||||||||||||||| ||| | ||||||||| ||||||
Sbjct: 300 tggaaagattactatgccaaggttgatgctgttgtctaccttgtggatgcttatgacaaa 359
Query: 449 gaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgca 508
||| | ||||| ||||| || | ||||| ||||| ||||| | ||||| ||||||||
Sbjct: 360 gaaagatttgcagagtcaaaaagagagcttgatgctcttctctcggatgaagcccttgca 419
Query: 509 aacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggag 568
| || || || || || || || ||||||||||| ||||| || || ||||| || ||
Sbjct: 420 actgtcccgtttctgattcttgggaacaagattgatatcccttatgcagcttctgaagac 479
Query: 569 gagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaacttg 628
|| |||||||| || | || || | |||||||| ||||| |||||||| |||| |
Sbjct: 480 gaactgaggtatcacttgggtctcactaacttcaccaccggtaagggcaaagtgacgctc 539
Query: 629 gccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggc 688
| ||||| ||| || || || ||| ||||||||||||| | || || || |||||
Sbjct: 540 ggagactctggtgttcgcccacttgaggtcttcatgtgcagcattgtccgtaaaatgggt 599
Query: 689 tatggcgaaggcttcaaatggatgtctcagtacatcaa 726
|||||||| || ||||||||| | ||||||||||||||
Sbjct: 600 tatggcgagggattcaaatggctctctcagtacatcaa 637
>gb|AY072220.1| Arabidopsis thaliana putative GTP-binding protein SAR1B (At1g56330)
mRNA, complete cds
Length = 950
Score = 67.9 bits (34), Expect = 4e-009
Identities = 262/338 (77%)
Strand = Plus / Plus
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaag 448
||||| || ||||| |||||||||||||||||||| ||| | ||||||||| ||||||
Sbjct: 306 tggaaagattactatgccaaggttgatgctgttgtctaccttgtggatgcttatgacaaa 365
Query: 449 gaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgca 508
||| | ||||| ||||| || | ||||| ||||| ||||| | ||||| ||||||||
Sbjct: 366 gaaagatttgcagagtcaaaaagagagcttgatgctcttctctcggatgaagcccttgca 425
Query: 509 aacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggag 568
| || || || || || || || ||||||||||| ||||| || || ||||| || ||
Sbjct: 426 actgtcccgtttctgattcttgggaacaagattgatatcccttatgcagcttctgaagac 485
Query: 569 gagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaacttg 628
|| |||||||| || | || || | |||||||| ||||| |||||||| |||| |
Sbjct: 486 gaactgaggtatcacttgggtctcactaacttcaccaccggtaagggcaaagtgacgctc 545
Query: 629 gccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggc 688
| ||||| ||| || || || ||| ||||||||||||| | || || || |||||
Sbjct: 546 ggagactctggtgttcgcccacttgaggtcttcatgtgcagcattgtccgtaaaatgggt 605
Query: 689 tatggcgaaggcttcaaatggatgtctcagtacatcaa 726
|||||||| || ||||||||| | ||||||||||||||
Sbjct: 606 tatggcgagggattcaaatggctctctcagtacatcaa 643
>gb|AY096599.1| Arabidopsis thaliana putative GTP-binding protein SAR1B (At1g56330)
mRNA, complete cds
Length = 613
Score = 67.9 bits (34), Expect = 4e-009
Identities = 262/338 (77%)
Strand = Plus / Plus
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaag 448
||||| || ||||| |||||||||||||||||||| ||| | ||||||||| ||||||
Sbjct: 241 tggaaagattactatgccaaggttgatgctgttgtctaccttgtggatgcttatgacaaa 300
Query: 449 gaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgca 508
||| | ||||| ||||| || | ||||| ||||| ||||| | ||||| ||||||||
Sbjct: 301 gaaagatttgcagagtcaaaaagagagcttgatgctcttctctcggatgaagcccttgca 360
Query: 509 aacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggag 568
| || || || || || || || ||||||||||| ||||| || || ||||| || ||
Sbjct: 361 actgtcccgtttctgattcttgggaacaagattgatatcccttatgcagcttctgaagac 420
Query: 569 gagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaacttg 628
|| |||||||| || | || || | |||||||| ||||| |||||||| |||| |
Sbjct: 421 gaactgaggtatcacttgggtctcactaacttcaccaccggtaagggcaaagtgacgctc 480
Query: 629 gccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggc 688
| ||||| ||| || || || ||| ||||||||||||| | || || || |||||
Sbjct: 481 ggagactctggtgttcgcccacttgaggtcttcatgtgcagcattgtccgtaaaatgggt 540
Query: 689 tatggcgaaggcttcaaatggatgtctcagtacatcaa 726
|||||||| || ||||||||| | ||||||||||||||
Sbjct: 541 tatggcgagggattcaaatggctctctcagtacatcaa 578
>gb|AY085815.1| Arabidopsis thaliana clone 1854 mRNA, complete sequence
Length = 904
Score = 67.9 bits (34), Expect = 4e-009
Identities = 262/338 (77%)
Strand = Plus / Plus
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaag 448
||||| || ||||| |||||||||||||||||||| ||| | ||||||||| ||||||
Sbjct: 312 tggaaagattactatgccaaggttgatgctgttgtctaccttgtggatgcttatgacaaa 371
Query: 449 gaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgca 508
||| | ||||| ||||| || | ||||| ||||| ||||| | ||||| ||||||||
Sbjct: 372 gaaagatttgcagagtcaaaaagagagcttgatgctcttctctcggatgaagcccttgca 431
Query: 509 aacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggag 568
| || || || || || || || ||||||||||| ||||| || || ||||| || ||
Sbjct: 432 actgtcccgtttctgattcttgggaacaagattgatatcccttatgcagcttctgaagac 491
Query: 569 gagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaacttg 628
|| |||||||| || | || || | |||||||| ||||| |||||||| |||| |
Sbjct: 492 gaactgaggtatcacttgggtctcactaacttcaccaccggtaagggcaaagtgacgctc 551
Query: 629 gccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggc 688
| ||||| ||| || || || ||| ||||||||||||| | || || || |||||
Sbjct: 552 ggagactctggtgttcgcccacttgaggtcttcatgtgcagcattgtccgtaaaatgggt 611
Query: 689 tatggcgaaggcttcaaatggatgtctcagtacatcaa 726
|||||||| || ||||||||| | ||||||||||||||
Sbjct: 612 tatggcgagggattcaaatggctctctcagtacatcaa 649
>ref|NM_104512.2| Arabidopsis thaliana SAR1 (SECRETION-ASSOCIATED RAS); GTP binding
AT1G56330 (SAR1) mRNA, complete cds
Length = 943
Score = 67.9 bits (34), Expect = 4e-009
Identities = 262/338 (77%)
Strand = Plus / Plus
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaag 448
||||| || ||||| |||||||||||||||||||| ||| | ||||||||| ||||||
Sbjct: 312 tggaaagattactatgccaaggttgatgctgttgtctaccttgtggatgcttatgacaaa 371
Query: 449 gaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgca 508
||| | ||||| ||||| || | ||||| ||||| ||||| | ||||| ||||||||
Sbjct: 372 gaaagatttgcagagtcaaaaagagagcttgatgctcttctctcggatgaagcccttgca 431
Query: 509 aacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggag 568
| || || || || || || || ||||||||||| ||||| || || ||||| || ||
Sbjct: 432 actgtcccgtttctgattcttgggaacaagattgatatcccttatgcagcttctgaagac 491
Query: 569 gagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaacttg 628
|| |||||||| || | || || | |||||||| ||||| |||||||| |||| |
Sbjct: 492 gaactgaggtatcacttgggtctcactaacttcaccaccggtaagggcaaagtgacgctc 551
Query: 629 gccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggc 688
| ||||| ||| || || || ||| ||||||||||||| | || || || |||||
Sbjct: 552 ggagactctggtgttcgcccacttgaggtcttcatgtgcagcattgtccgtaaaatgggt 611
Query: 689 tatggcgaaggcttcaaatggatgtctcagtacatcaa 726
|||||||| || ||||||||| | ||||||||||||||
Sbjct: 612 tatggcgagggattcaaatggctctctcagtacatcaa 649
>gb|CB257839.1|CB257839 44-E011083-014-003-H12-T7R MPIZ-ADIS-014 Arabidopsis thaliana cDNA
clone MPIZp771H123Q 5-PRIME, mRNA sequence
Length = 619
Score = 61.9 bits (31), Expect = 2e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgct 439
||||| |||||||| |||||||||||||||||||| ||| | |||||||||
Sbjct: 365 tggaaagactactatgccaaggttgatgctgttgtctacctagtggatgct 415
>gb|BP862893.1|BP862893 BP862893 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-64-M14 5',
mRNA sequence
Length = 379
Score = 61.9 bits (31), Expect = 2e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgct 439
||||| || ||||| |||||||||||||||||||| ||| |||||||||||
Sbjct: 305 tggaaagattactatgccaaggttgatgctgttgtctacctggtggatgct 355
>gb|CB257018.1|CB257018 51-E010797-027-001-E07-T7R MPIZ-ADIS-027 Arabidopsis thaliana cDNA
clone MPIZp772E071Q 5-PRIME, mRNA sequence
Length = 628
Score = 60.0 bits (30), Expect = 1e-006
Identities = 237/306 (77%)
Strand = Plus / Plus
Query: 269 aaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttgagc 328
||||||||| | || || ||||| |||||||| ||| | || || || |||||| | ||
Sbjct: 2 aaggacgagagactggtccagcatcagccgacacagcatccgacatcggaagagcttagt 61
Query: 329 atcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtc 388
||||||| ||||||||||| || ||||| | || || || ||||| || || | |||
Sbjct: 62 atcggcaaaatcaagttcaaagccttcgatttgggaggtcatcagattgctcgtagagtc 121
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaag 448
||||||||||| ||||| ||||||||||| || || ||| | || ||||| ||||||
Sbjct: 122 tggaaggactattacgctaaggttgatgcagtggtatacctagttgatgcatatgacaaa 181
Query: 449 gaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgca 508
|| | ||||| || || ||||| ||||| || || ||||| | ||||| ||||| |||
Sbjct: 182 gagaggtttgcagaatcaaagaaagagcttgacgctcttctctctgatgaatccctagca 241
Query: 509 aacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggag 568
|| || ||||||||||| || || ||||| || ||||| || ||||| || ||||| ||
Sbjct: 242 aatgtccctttcctcatccttggaaacaaaatcgacattccgtacgctgcatcagaagac 301
Query: 569 gagctg 574
||||||
Sbjct: 302 gagctg 307
>gb|T04723.1|T04723 770 Lambda-PRL2 Arabidopsis thaliana cDNA clone 31B2T7, mRNA
sequence
Length = 400
Score = 58.0 bits (29), Expect = 4e-006
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaag 448
||||| || ||||| |||||||||||||||||||| ||| | ||||||||| ||||||
Sbjct: 262 tggaaagattactatgccaaggttgatgctgttgtctaccttgtggatgcttatgacaaa 321
Query: 449 gaacgttttgccgagtc 465
||| | ||||| |||||
Sbjct: 322 gaaagatttgcagagtc 338
>gb|BP811424.1|BP811424 BP811424 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-30-K09 5',
mRNA sequence
Length = 406
Score = 58.0 bits (29), Expect = 4e-006
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaag 448
||||| || ||||| |||||||||||||||||||| ||| | ||||||||| ||||||
Sbjct: 309 tggaaagattactatgccaaggttgatgctgttgtctaccttgtggatgcttatgacaaa 368
Query: 449 gaacgttttgccgagtc 465
||| | ||||| |||||
Sbjct: 369 gaaagatttgcagagtc 385
>gb|BP859844.1|BP859844 BP859844 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-42-A11 5',
mRNA sequence
Length = 390
Score = 58.0 bits (29), Expect = 4e-006
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaag 448
||||| || ||||| |||||||||||||||||||| ||| | ||||||||| ||||||
Sbjct: 304 tggaaagattactatgccaaggttgatgctgttgtctaccttgtggatgcttatgacaaa 363
Query: 449 gaacgttttgccgagtc 465
||| | ||||| |||||
Sbjct: 364 gaaagatttgcagagtc 380
>gb|AC069159.8|AC069159 Arabidopsis thaliana chromosome 1 BAC F14G9 genomic sequence, complete
sequence
Length = 111481
Score = 56.0 bits (28), Expect = 1e-005
Identities = 247/320 (77%)
Strand = Plus / Plus
Query: 407 aaggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgttttgccgagtcg 466
||||||||||||||||| ||| | ||||||||| |||||| ||| | ||||| |||||
Sbjct: 21050 aaggttgatgctgttgtctaccttgtggatgcttatgacaaagaaagatttgcagagtca 21109
Query: 467 aagaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcctttcctcata 526
|| | ||||| ||||| ||||| | ||||| ||||||||| || || || || ||
Sbjct: 21110 aaaagagagcttgatgctcttctctcggatgaagcccttgcaactgtcccgtttctgatt 21169
Query: 527 ctgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctc 586
|| || ||||||||||| ||||| || || ||||| || || || |||||||| || |
Sbjct: 21170 cttgggaacaagattgatatcccttatgcagcttctgaagacgaactgaggtatcacttg 21229
Query: 587 ggcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccgg 646
|| || | |||||||| ||||| |||||||| |||| | | ||||| ||| ||
Sbjct: 21230 ggtctcactaacttcaccaccggtaagggcaaagtgacgctcggagactctggtgttcgc 21289
Query: 647 cccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaa 706
|| || ||| ||||||||||||| | || || || ||||| |||||||| || ||||||
Sbjct: 21290 ccacttgaggtcttcatgtgcagcattgtccgtaaaatgggttatggcgagggattcaaa 21349
Query: 707 tggatgtctcagtacatcaa 726
||| | ||||||||||||||
Sbjct: 21350 tggctctctcagtacatcaa 21369
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 56.0 bits (28), Expect = 1e-005
Identities = 247/320 (77%)
Strand = Plus / Minus
Query: 407 aaggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgttttgccgagtcg 466
||||||||||||||||| ||| | ||||||||| |||||| ||| | ||||| |||||
Sbjct: 5446609 aaggttgatgctgttgtctaccttgtggatgcttatgacaaagaaagatttgcagagtca 5446550
Query: 467 aagaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcctttcctcata 526
|| | ||||| ||||| ||||| | ||||| ||||||||| || || || || ||
Sbjct: 5446549 aaaagagagcttgatgctcttctctcggatgaagcccttgcaactgtcccgtttctgatt 5446490
Query: 527 ctgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctc 586
|| || ||||||||||| ||||| || || ||||| || || || |||||||| || |
Sbjct: 5446489 cttgggaacaagattgatatcccttatgcagcttctgaagacgaactgaggtatcacttg 5446430
Query: 587 ggcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccgg 646
|| || | |||||||| ||||| |||||||| |||| | | ||||| ||| ||
Sbjct: 5446429 ggtctcactaacttcaccaccggtaagggcaaagtgacgctcggagactctggtgttcgc 5446370
Query: 647 cccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaa 706
|| || ||| ||||||||||||| | || || || ||||| |||||||| || ||||||
Sbjct: 5446369 ccacttgaggtcttcatgtgcagcattgtccgtaaaatgggttatggcgagggattcaaa 5446310
Query: 707 tggatgtctcagtacatcaa 726
||| | ||||||||||||||
Sbjct: 5446309 tggctctctcagtacatcaa 5446290
Score = 44.1 bits (22), Expect = 0.057
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 106 gaagaggaagaggaagaggaagagga 131
|||||||||||||||| |||||||||
Sbjct: 12770618 gaagaggaagaggaaggggaagagga 12770593
Score = 42.1 bits (21), Expect = 0.22
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 106 gaagaggaagaggaagaggaagagg 130
|||||||| ||||||||||||||||
Sbjct: 7508218 gaagaggaggaggaagaggaagagg 7508242
Score = 42.1 bits (21), Expect = 0.22
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 104 gcgaagaggaagaggaagaggaaga 128
||||||||||||||||||| |||||
Sbjct: 7160950 gcgaagaggaagaggaagaagaaga 7160926
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 56.0 bits (28), Expect = 1e-005
Identities = 247/320 (77%)
Strand = Plus / Minus
Query: 407 aaggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgttttgccgagtcg 466
||||||||||||||||| ||| | ||||||||| |||||| ||| | ||||| |||||
Sbjct: 21090833 aaggttgatgctgttgtctaccttgtggatgcttatgacaaagaaagatttgcagagtca 21090774
Query: 467 aagaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcctttcctcata 526
|| | ||||| ||||| ||||| | ||||| ||||||||| || || || || ||
Sbjct: 21090773 aaaagagagcttgatgctcttctctcggatgaagcccttgcaactgtcccgtttctgatt 21090714
Query: 527 ctgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctc 586
|| || ||||||||||| ||||| || || ||||| || || || |||||||| || |
Sbjct: 21090713 cttgggaacaagattgatatcccttatgcagcttctgaagacgaactgaggtatcacttg 21090654
Query: 587 ggcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccgg 646
|| || | |||||||| ||||| |||||||| |||| | | ||||| ||| ||
Sbjct: 21090653 ggtctcactaacttcaccaccggtaagggcaaagtgacgctcggagactctggtgttcgc 21090594
Query: 647 cccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaa 706
|| || ||| ||||||||||||| | || || || ||||| |||||||| || ||||||
Sbjct: 21090593 ccacttgaggtcttcatgtgcagcattgtccgtaaaatgggttatggcgagggattcaaa 21090534
Query: 707 tggatgtctcagtacatcaa 726
||| | ||||||||||||||
Sbjct: 21090533 tggctctctcagtacatcaa 21090514
Score = 52.0 bits (26), Expect = 2e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 647 cccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaa 706
||||| ||| ||||||||||||| | || ||||| ||||| |||||||| || || |||
Sbjct: 2965860 ccccttgaggtcttcatgtgcagcatcgtccgcaaaatgggttatggcgagggttttaaa 2965919
Query: 707 tggatgtctcagtacatcaagt 728
||| | |||||||| |||||||
Sbjct: 2965920 tggctatctcagtatatcaagt 2965941
Score = 46.1 bits (23), Expect = 0.014
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 106 gaagaggaagaggaagaggaaga 128
|||||||||||||||||||||||
Sbjct: 8529421 gaagaggaagaggaagaggaaga 8529399
Score = 44.1 bits (22), Expect = 0.057
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 106 gaagaggaagaggaagaggaagagga 131
|||||||||||||||| |||||||||
Sbjct: 28532960 gaagaggaagaggaaggggaagagga 28532935
Score = 44.1 bits (22), Expect = 0.057
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 106 gaagaggaagaggaagaggaagagga 131
||||||||||||||||| ||||||||
Sbjct: 8529415 gaagaggaagaggaagaagaagagga 8529390
Score = 42.1 bits (21), Expect = 0.22
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 106 gaagaggaagaggaagaggaagagg 130
|||||||| ||||||||||||||||
Sbjct: 23270567 gaagaggaggaggaagaggaagagg 23270591
Score = 42.1 bits (21), Expect = 0.22
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 104 gcgaagaggaagaggaagaggaaga 128
||||||||||||||||||| |||||
Sbjct: 22923299 gcgaagaggaagaggaagaagaaga 22923275
Score = 42.1 bits (21), Expect = 0.22
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 407 aaggttgatgctgttgtgtacttggtggatgct 439
||||||||||||||||| ||| | |||||||||
Sbjct: 2965620 aaggttgatgctgttgtctacctagtggatgct 2965652
Score = 42.1 bits (21), Expect = 0.22
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 106 gaagaggaagaggaagaggaa 126
|||||||||||||||||||||
Sbjct: 358526 gaagaggaagaggaagaggaa 358506
>gb|AV812558.1|AV812558 AV812558 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-74-F17 3',
mRNA sequence
Length = 396
Score = 54.0 bits (27), Expect = 6e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 657 tcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaatggatgtctc 716
||||||||||||| | || || || ||||| |||||||| || ||||||||| | ||||
Sbjct: 364 tcttcatgtgcagcattgtccgtaaaatgggttatggcgagggattcaaatggctctctc 305
Query: 717 agtacatcaag 727
|||||||||||
Sbjct: 304 agtacatcaag 294
>gb|CB261903.1|CB261903 82-E8879-008-014-C22-pBl2 MPIZ-ADIS-008 Arabidopsis thaliana cDNA
clone MPIZp767C2214Q 5-PRIME, mRNA sequence
Length = 413
Score = 54.0 bits (27), Expect = 6e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgct 439
||||| || ||||| |||||||||||||||||||| ||| | |||||||||
Sbjct: 273 tggaaagattactatgccaaggttgatgctgttgtctaccttgtggatgct 323
>gb|BP589547.1|BP589547 BP589547 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-50-C18 3',
mRNA sequence
Length = 437
Score = 54.0 bits (27), Expect = 6e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 657 tcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaatggatgtctc 716
||||||||||||| | || || || ||||| |||||||| || ||||||||| | ||||
Sbjct: 349 tcttcatgtgcagcattgtccgtaaaatgggttatggcgagggattcaaatggctctctc 290
Query: 717 agtacatcaag 727
|||||||||||
Sbjct: 289 agtacatcaag 279
>gb|BP602497.1|BP602497 BP602497 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-54-P22 3',
mRNA sequence
Length = 418
Score = 54.0 bits (27), Expect = 6e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 657 tcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaatggatgtctc 716
||||||||||||| | || || || ||||| |||||||| || ||||||||| | ||||
Sbjct: 352 tcttcatgtgcagcattgtccgtaaaatgggttatggcgagggattcaaatggctctctc 293
Query: 717 agtacatcaag 727
|||||||||||
Sbjct: 292 agtacatcaag 282
>gb|BP605301.1|BP605301 BP605301 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-66-E17 3',
mRNA sequence
Length = 433
Score = 54.0 bits (27), Expect = 6e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 657 tcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaatggatgtctc 716
||||||||||||| | || || || ||||| |||||||| || ||||||||| | ||||
Sbjct: 352 tcttcatgtgcagcattgtccgtaaaatgggttatggcgagggattcaaatggctctctc 293
Query: 717 agtacatcaag 727
|||||||||||
Sbjct: 292 agtacatcaag 282
>gb|BP634908.1|BP634908 BP634908 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-36-F10 3',
mRNA sequence
Length = 380
Score = 54.0 bits (27), Expect = 6e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 657 tcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaatggatgtctc 716
||||||||||||| | || || || ||||| |||||||| || ||||||||| | ||||
Sbjct: 362 tcttcatgtgcagcattgtccgtaaaatgggttatggcgagggattcaaatggctctctc 303
Query: 717 agtacatcaag 727
|||||||||||
Sbjct: 302 agtacatcaag 292
>gb|BP829563.1|BP829563 BP829563 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-82-H11 5',
mRNA sequence
Length = 383
Score = 54.0 bits (27), Expect = 6e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgct 439
||||| || ||||| |||||||||||||||||||| ||| | |||||||||
Sbjct: 312 tggaaagattactatgccaaggttgatgctgttgtctaccttgtggatgct 362
>gb|BP833088.1|BP833088 BP833088 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-94-M08 5',
mRNA sequence
Length = 390
Score = 54.0 bits (27), Expect = 6e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgct 439
||||| || ||||| |||||||||||||||||||| ||| | |||||||||
Sbjct: 310 tggaaagattactatgccaaggttgatgctgttgtctaccttgtggatgct 360
>gb|BP841938.1|BP841938 BP841938 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-52-K12 5',
mRNA sequence
Length = 393
Score = 54.0 bits (27), Expect = 6e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgct 439
||||| || ||||| |||||||||||||||||||| ||| | |||||||||
Sbjct: 341 tggaaagattactatgccaaggttgatgctgttgtctaccttgtggatgct 391
>gb|BP856044.1|BP856044 BP856044 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-28-K13 5',
mRNA sequence
Length = 408
Score = 54.0 bits (27), Expect = 6e-005
Identities = 88/107 (82%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 148 gatgttcctggtggactggttctatggggtgc-tggcatcgcttgggctgtggcagaagg 206
||||||||||||||| ||||||||||| || | ||||| | || || || |||||||| |
Sbjct: 53 gatgttcctggtggattggttctatggagttcgtggcaactctgggactatggcagaaag 112
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccacc 253
| || ||||| || || || || ||||||||||| ||||| ||||||
Sbjct: 113 aagcgaagattctgtttctaggtctcgacaacgcgggcaaaaccacc 159
>gb|AY090921.1| Arabidopsis thaliana putative GTP-binding protein, SAR1B
(At1g09180) mRNA, complete cds
Length = 613
Score = 54.0 bits (27), Expect = 6e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgct 439
||||| |||| ||| |||||||||||||||||||| ||| | |||||||||
Sbjct: 241 tggaaagactgctatgccaaggttgatgctgttgtctacctagtggatgct 291
Score = 52.0 bits (26), Expect = 2e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 647 cccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaa 706
||||| ||| ||||||||||||| | || ||||| ||||| |||||||| || || |||
Sbjct: 499 ccccttgaggtcttcatgtgcagcatcgtccgcaaaatgggttatggcgagggttttaaa 558
Query: 707 tggatgtctcagtacatcaagt 728
||| | |||||||| |||||||
Sbjct: 559 tggctatctcagtatatcaagt 580
>ref|NM_100788.3| Arabidopsis thaliana ATSAR1/ATSARA1A; GTP binding AT1G09180
(ATSAR1/ATSARA1A) mRNA, complete cds
Length = 737
Score = 54.0 bits (27), Expect = 6e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgct 439
||||| |||| ||| |||||||||||||||||||| ||| | |||||||||
Sbjct: 365 tggaaagactgctatgccaaggttgatgctgttgtctacctagtggatgct 415
Score = 52.0 bits (26), Expect = 2e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 647 cccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaa 706
||||| ||| ||||||||||||| | || ||||| ||||| |||||||| || || |||
Sbjct: 623 ccccttgaggtcttcatgtgcagcatcgtccgcaaaatgggttatggcgagggttttaaa 682
Query: 707 tggatgtctcagtacatcaagt 728
||| | |||||||| |||||||
Sbjct: 683 tggctatctcagtatatcaagt 704
>gb|BH810290.1|BH810290 SALK_048796 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_048796, DNA sequence
Length = 458
Score = 52.0 bits (26), Expect = 2e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 647 cccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaa 706
||||| ||| ||||||||||||| | || ||||| ||||| |||||||| || || |||
Sbjct: 188 ccccttgaggtcttcatgtgcagcatcgtccgcaaaatgggttatggcgagggttttaaa 247
Query: 707 tggatgtctcagtacatcaagt 728
||| | |||||||| |||||||
Sbjct: 248 tggctatctcagtatatcaagt 269
>gb|CL469873.1|CL469873 SAIL_134_G06.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_134_G06.v1, DNA sequence
Length = 1073
Score = 52.0 bits (26), Expect = 2e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 106 gaagaggaagaggaagaggaagagga 131
||||||||||||||||||||||||||
Sbjct: 192 gaagaggaagaggaagaggaagagga 167
Score = 52.0 bits (26), Expect = 2e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 106 gaagaggaagaggaagaggaagagga 131
||||||||||||||||||||||||||
Sbjct: 186 gaagaggaagaggaagaggaagagga 161
Score = 44.1 bits (22), Expect = 0.057
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 106 gaagaggaagaggaagaggaag 127
||||||||||||||||||||||
Sbjct: 180 gaagaggaagaggaagaggaag 159
>gb|AI998662.1|AI998662 701546483 A. thaliana, Columbia Col-0, rosette-2 Arabidopsis
thaliana cDNA clone 701546483, mRNA sequence
Length = 475
Score = 52.0 bits (26), Expect = 2e-004
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 657 tcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaatggatgtctc 716
||||||||||||| | || || || ||||| |||||||| || ||||||||| | ||||
Sbjct: 372 tcttcatgtgcagcattgtccgtaaaatgggttatggcgagggattcaaatggctctctc 313
Query: 717 agtacatcaa 726
||||||||||
Sbjct: 312 agtacatcaa 303
>gb|AV814313.1|AV814313 AV814313 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-82-I09 3',
mRNA sequence
Length = 404
Score = 52.0 bits (26), Expect = 2e-004
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 657 tcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaatggatgtctc 716
||||||||||||| | || || || ||||| |||||||| || ||||||||| | ||||
Sbjct: 365 tcttcatgtgcagcattgtccgtaaaatgggttatggcgagggattcaaatggctctctc 306
Query: 717 agtacatcaa 726
||||||||||
Sbjct: 305 agtacatcaa 296
>gb|BU636578.1|BU636578 008D06 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 373
Score = 52.0 bits (26), Expect = 2e-004
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 657 tcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaatggatgtctc 716
||||||||||||| | || || || ||||| |||||||| || ||||||||| | ||||
Sbjct: 176 tcttcatgtgcagcattgtccgtaaaatgggttatggcgagggattcaaatggctctctc 235
Query: 717 agtacatcaa 726
||||||||||
Sbjct: 236 agtacatcaa 245
>gb|AV543560.1|AV543560 AV543560 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ202g09F 3', mRNA sequence
Length = 328
Score = 52.0 bits (26), Expect = 2e-004
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 657 tcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaatggatgtctc 716
||||||||||||| | || || || ||||| |||||||| || ||||||||| | ||||
Sbjct: 295 tcttcatgtgcagcattgtccgtaaaatgggttatggcgagggattcaaatggctctctc 236
Query: 717 agtacatcaa 726
||||||||||
Sbjct: 235 agtacatcaa 226
>gb|AV565941.1|AV565941 AV565941 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ233e04F 3', mRNA sequence
Length = 549
Score = 52.0 bits (26), Expect = 2e-004
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 657 tcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaatggatgtctc 716
||||||||||||| | || || || ||||| |||||||| || ||||||||| | ||||
Sbjct: 351 tcttcatgtgcagcattgtccgtaaaatgggttatggcgagggattcaaatggctctctc 292
Query: 717 agtacatcaa 726
||||||||||
Sbjct: 291 agtacatcaa 282
>gb|BP563740.1|BP563740 BP563740 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-04-G15 3',
mRNA sequence
Length = 429
Score = 52.0 bits (26), Expect = 2e-004
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 657 tcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaatggatgtctc 716
||||||||||||| | || || || ||||| |||||||| || ||||||||| | ||||
Sbjct: 306 tcttcatgtgcagcattgtccgtaaaatgggttatggcgagggattcaaatggctctctc 247
Query: 717 agtacatcaa 726
||||||||||
Sbjct: 246 agtacatcaa 237
>gb|BP577556.1|BP577556 BP577556 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-97-D06 3',
mRNA sequence
Length = 397
Score = 52.0 bits (26), Expect = 2e-004
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 657 tcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaatggatgtctc 716
||||||||||||| | || || || ||||| |||||||| || ||||||||| | ||||
Sbjct: 330 tcttcatgtgcagcattgtccgtaaaatgggttatggcgagggattcaaatggctctctc 271
Query: 717 agtacatcaa 726
||||||||||
Sbjct: 270 agtacatcaa 261
>gb|BP597152.1|BP597152 BP597152 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-38-D05 3',
mRNA sequence
Length = 410
Score = 52.0 bits (26), Expect = 2e-004
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 657 tcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaatggatgtctc 716
||||||||||||| | || || || ||||| |||||||| || ||||||||| | ||||
Sbjct: 361 tcttcatgtgcagcattgtccgtaaaatgggttatggcgagggattcaaatggctctctc 302
Query: 717 agtacatcaa 726
||||||||||
Sbjct: 301 agtacatcaa 292
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 578,393
Number of Sequences: 1013581
Number of extensions: 578393
Number of successful extensions: 57474
Number of sequences better than 0.5: 196
Number of HSP's better than 0.5 without gapping: 204
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 51437
Number of HSP's gapped (non-prelim): 5711
length of query: 1231
length of database: 908,940,872
effective HSP length: 20
effective length of query: 1211
effective length of database: 888,669,252
effective search space: 1076178464172
effective search space used: 1076178464172
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)