BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493944.2.2
(2027 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BP835927.1|BP835927 BP835927 RAFL19 Arabidopsis thaliana... 72 4e-010
gb|U11033.1|ATU11033 Arabidopsis thaliana Columbia invertas... 72 4e-010
dbj|AK118343.1| Arabidopsis thaliana At3g52600 mRNA for put... 72 4e-010
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 72 4e-010
emb|AL353912.1|ATF3C22 Arabidopsis thaliana DNA chromosome ... 72 4e-010
emb|AL050300.2|ATF22O6 Arabidopsis thaliana DNA chromosome ... 72 4e-010
ref|NM_115120.2| Arabidopsis thaliana hydrolase, hydrolyzin... 72 4e-010
ref|NM_001035770.1| Arabidopsis thaliana hydrolase, hydroly... 72 4e-010
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 72 4e-010
emb|X70691.1|ATBDF A.thaliana gene for beta-D-fructofuranos... 66 3e-008
gb|BP826876.1|BP826876 BP826876 RAFL19 Arabidopsis thaliana... 64 1e-007
gb|BP816123.1|BP816123 BP816123 RAFL19 Arabidopsis thaliana... 62 4e-007
gb|AV821594.1|AV821594 AV821594 RAFL4 Arabidopsis thaliana ... 58 6e-006
gb|CB264142.1|CB264142 86-E015023-035-004-L21-T7R MPIZ-ADIS... 58 6e-006
emb|X97749.1|ATBFRUC4 A.thaliana mRNA for beta-fructosidase... 58 6e-006
emb|Y11559.1|ATBFRUCT4 A.thaliana bfruct4 gene 58 6e-006
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 58 6e-006
gb|AY046009.1| Arabidopsis thaliana putative beta-fructosid... 58 6e-006
gb|AY142666.1| Arabidopsis thaliana putative beta-fructosid... 58 6e-006
gb|AC022522.2|AC022522 Arabidopsis thaliana chromosome I BA... 58 6e-006
emb|CQ805170.1| Sequence 1581 from Patent WO2004035798 58 6e-006
ref|NM_101096.2| Arabidopsis thaliana ATBETAFRUCT4; beta-fr... 58 6e-006
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 58 6e-006
gb|AU239205.1|AU239205 AU239205 RAFL19 Arabidopsis thaliana... 50 0.002
gb|BP825765.1|BP825765 BP825765 RAFL19 Arabidopsis thaliana... 50 0.002
gb|AV822292.1|AV822292 AV822292 RAFL5 Arabidopsis thaliana ... 48 0.006
gb|AV824486.1|AV824486 AV824486 RAFL6 Arabidopsis thaliana ... 48 0.006
gb|AV826151.1|AV826151 AV826151 RAFL8 Arabidopsis thaliana ... 48 0.006
gb|AV826374.1|AV826374 AV826374 RAFL8 Arabidopsis thaliana ... 48 0.006
gb|AV826457.1|AV826457 AV826457 RAFL8 Arabidopsis thaliana ... 48 0.006
gb|AV553248.1|AV553248 AV553248 Arabidopsis thaliana roots ... 48 0.006
emb|X95537.1|ATBFRUC A.thaliana mRNa for beta-fructosidase 48 0.006
emb|X99111.1|ATBETAFRU A.thaliana gene coding for beta-fruc... 48 0.006
emb|X89454.1|ATBFRUCT Arabidopsis thaliana mRNA for Beta-fr... 48 0.006
gb|AY039610.1| Arabidopsis thaliana At1g62660/F23N19_3 mRNA... 48 0.006
gb|AY048269.1| Arabidopsis thaliana At1g62660/F23N19_3 mRNA... 48 0.006
gb|AY062481.1| Arabidopsis thaliana putative beta-fructosid... 48 0.006
gb|AY063904.1| Arabidopsis thaliana putative beta-fructosid... 48 0.006
gb|AY114066.1| Arabidopsis thaliana putative beta-fructosid... 48 0.006
gb|BT000509.1| Arabidopsis thaliana beta-fructosidase (At1... 48 0.006
emb|AX507631.1| Sequence 2326 from Patent WO0216655 48 0.006
gb|AC005698.1|AC005698 Genomic sequence for Arabidopsis tha... 48 0.006
gb|AC007190.4|AC007190 Genomic sequence for Arabidopsis tha... 48 0.006
emb|CQ804994.1| Sequence 1405 from Patent WO2004035798 48 0.006
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 48 0.006
ref|NM_104943.2| Arabidopsis thaliana hydrolase, hydrolyzin... 48 0.006
gb|AQ960766.1|AQ960766 LERFH13TF LERA Arabidopsis thaliana ... 44 0.094
gb|CL494107.1|CL494107 SAIL_58_B11.v2 SAIL Collection Arabi... 42 0.37
>gb|BP835927.1|BP835927 BP835927 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-14-O16 5',
mRNA sequence
Length = 377
Score = 71.9 bits (36), Expect = 4e-010
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 271 taccatttcttctaccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcg 330
|||||| |||||||||||||||||||||| || || || ||||| ||||| ||||||||
Sbjct: 300 taccatctcttctaccaatacaatcccaaaggtgcggtttggggtaacattgtgtgggct 359
Query: 331 cactcggt 338
||||||||
Sbjct: 360 cactcggt 367
>gb|U11033.1|ATU11033 Arabidopsis thaliana Columbia invertase gene, complete cds
Length = 2571
Score = 71.9 bits (36), Expect = 4e-010
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 271 taccatttcttctaccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcg 330
|||||| |||||||||||||||||||||| || || || ||||| ||||| ||||||||
Sbjct: 753 taccatctcttctaccaatacaatcccaaaggtgcggtttggggtaacattgtgtgggct 812
Query: 331 cactcggt 338
||||||||
Sbjct: 813 cactcggt 820
>dbj|AK118343.1| Arabidopsis thaliana At3g52600 mRNA for putative
beta-fructofuranosidase, complete cds, clone:
RAFL19-61-I02
Length = 1997
Score = 71.9 bits (36), Expect = 4e-010
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 271 taccatttcttctaccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcg 330
|||||| |||||||||||||||||||||| || || || ||||| ||||| ||||||||
Sbjct: 303 taccatctcttctaccaatacaatcccaaaggtgcggtttggggtaacattgtgtgggct 362
Query: 331 cactcggt 338
||||||||
Sbjct: 363 cactcggt 370
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 71.9 bits (36), Expect = 4e-010
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 271 taccatttcttctaccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcg 330
|||||| |||||||||||||||||||||| || || || ||||| ||||| ||||||||
Sbjct: 19472266 taccatctcttctaccaatacaatcccaaaggtgcggtttggggtaacattgtgtgggct 19472207
Query: 331 cactcggt 338
||||||||
Sbjct: 19472206 cactcggt 19472199
>emb|AL353912.1|ATF3C22 Arabidopsis thaliana DNA chromosome 3, BAC clone F3C22
Length = 100028
Score = 71.9 bits (36), Expect = 4e-010
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 271 taccatttcttctaccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcg 330
|||||| |||||||||||||||||||||| || || || ||||| ||||| ||||||||
Sbjct: 29295 taccatctcttctaccaatacaatcccaaaggtgcggtttggggtaacattgtgtgggct 29236
Query: 331 cactcggt 338
||||||||
Sbjct: 29235 cactcggt 29228
>emb|AL050300.2|ATF22O6 Arabidopsis thaliana DNA chromosome 3, BAC clone F22O6
Length = 93443
Score = 71.9 bits (36), Expect = 4e-010
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 271 taccatttcttctaccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcg 330
|||||| |||||||||||||||||||||| || || || ||||| ||||| ||||||||
Sbjct: 91012 taccatctcttctaccaatacaatcccaaaggtgcggtttggggtaacattgtgtgggct 90953
Query: 331 cactcggt 338
||||||||
Sbjct: 90952 cactcggt 90945
>ref|NM_115120.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT3G52600 transcript variant AT3G52600.1 mRNA, complete
cds
Length = 1996
Score = 71.9 bits (36), Expect = 4e-010
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 271 taccatttcttctaccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcg 330
|||||| |||||||||||||||||||||| || || || ||||| ||||| ||||||||
Sbjct: 303 taccatctcttctaccaatacaatcccaaaggtgcggtttggggtaacattgtgtgggct 362
Query: 331 cactcggt 338
||||||||
Sbjct: 363 cactcggt 370
>ref|NM_001035770.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT3G52600 transcript variant AT3G52600.2 mRNA, complete
cds
Length = 2320
Score = 71.9 bits (36), Expect = 4e-010
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 271 taccatttcttctaccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcg 330
|||||| |||||||||||||||||||||| || || || ||||| ||||| ||||||||
Sbjct: 336 taccatctcttctaccaatacaatcccaaaggtgcggtttggggtaacattgtgtgggct 395
Query: 331 cactcggt 338
||||||||
Sbjct: 396 cactcggt 403
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 71.9 bits (36), Expect = 4e-010
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 271 taccatttcttctaccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcg 330
|||||| |||||||||||||||||||||| || || || ||||| ||||| ||||||||
Sbjct: 19519793 taccatctcttctaccaatacaatcccaaaggtgcggtttggggtaacattgtgtgggct 19519734
Query: 331 cactcggt 338
||||||||
Sbjct: 19519733 cactcggt 19519726
>emb|X70691.1|ATBDF A.thaliana gene for beta-D-fructofuranosidase
Length = 558
Score = 65.9 bits (33), Expect = 3e-008
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 278 tcttctaccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcgcactcgg 337
|||||||||||||||||||||| || || || ||||| ||||| |||||||| |||||||
Sbjct: 50 tcttctaccaatacaatcccaaaggtgcggtttggggtaacattgtgtgggctcactcgg 109
Query: 338 t 338
|
Sbjct: 110 t 110
>gb|BP826876.1|BP826876 BP826876 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-73-K16 5',
mRNA sequence
Length = 374
Score = 63.9 bits (32), Expect = 1e-007
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 271 taccatttcttctaccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcg 330
|||||| |||||||||||||||||||||| || || || |||| ||||| ||||||||
Sbjct: 299 taccatctcttctaccaatacaatcccaaaggtgcggttgggggtaacatggtgtgggct 358
Query: 331 cactcggt 338
||||||||
Sbjct: 359 cactcggt 366
>gb|BP816123.1|BP816123 BP816123 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-40-O21 5',
mRNA sequence
Length = 421
Score = 61.9 bits (31), Expect = 4e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 271 taccatttcttctaccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcg 330
|||||| |||||||||||||||||||||| || || || |||| ||||| ||||||||
Sbjct: 302 taccatctcttctaccaatacaatcccaaaggtgcggttgggggtaacattgtgtgggct 361
Query: 331 cactcgg 337
|||||||
Sbjct: 362 cactcgg 368
>gb|AV821594.1|AV821594 AV821594 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-13-P13 5',
mRNA sequence
Length = 679
Score = 58.0 bits (29), Expect = 6e-006
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 258 ctacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatgggg 314
||||||||| ||||||||||||||||||||||| || || || | |||||||||||
Sbjct: 462 ctacaagggatggtaccatttcttctaccaatataacccaaacgcagccgtatgggg 518
>gb|CB264142.1|CB264142 86-E015023-035-004-L21-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000L214Q 5-PRIME, mRNA sequence
Length = 609
Score = 58.0 bits (29), Expect = 6e-006
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 258 ctacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatgggg 314
||||||||| ||||||||||||||||||||||| || || || | |||||||||||
Sbjct: 182 ctacaagggatggtaccatttcttctaccaatataacccaaacgcagccgtatgggg 238
>emb|X97749.1|ATBFRUC4 A.thaliana mRNA for beta-fructosidase (vacuolar form)
Length = 2118
Score = 58.0 bits (29), Expect = 6e-006
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 258 ctacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatgggg 314
||||||||| ||||||||||||||||||||||| || || || | |||||||||||
Sbjct: 412 ctacaagggatggtaccatttcttctaccaatataacccaaacgcagccgtatgggg 468
>emb|Y11559.1|ATBFRUCT4 A.thaliana bfruct4 gene
Length = 4207
Score = 58.0 bits (29), Expect = 6e-006
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 258 ctacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatgggg 314
||||||||| ||||||||||||||||||||||| || || || | |||||||||||
Sbjct: 1608 ctacaagggatggtaccatttcttctaccaatataacccaaacgcagccgtatgggg 1664
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 58.0 bits (29), Expect = 6e-006
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 258 ctacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatgggg 314
||||||||| ||||||||||||||||||||||| || || || | |||||||||||
Sbjct: 4154922 ctacaagggatggtaccatttcttctaccaatataacccaaacgcagccgtatgggg 4154978
>gb|AY046009.1| Arabidopsis thaliana putative beta-fructosidase (At1g12240) mRNA,
complete cds
Length = 2206
Score = 58.0 bits (29), Expect = 6e-006
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 258 ctacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatgggg 314
||||||||| ||||||||||||||||||||||| || || || | |||||||||||
Sbjct: 462 ctacaagggatggtaccatttcttctaccaatataacccaaacgcagccgtatgggg 518
>gb|AY142666.1| Arabidopsis thaliana putative beta-fructosidase (At1g12240) mRNA,
complete cds
Length = 2026
Score = 58.0 bits (29), Expect = 6e-006
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 258 ctacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatgggg 314
||||||||| ||||||||||||||||||||||| || || || | |||||||||||
Sbjct: 423 ctacaagggatggtaccatttcttctaccaatataacccaaacgcagccgtatgggg 479
>gb|AC022522.2|AC022522 Arabidopsis thaliana chromosome I BAC T28K15 genomic sequence, complete
sequence
Length = 88643
Score = 58.0 bits (29), Expect = 6e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 258 ctacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatgggg 314
||||||||| ||||||||||||||||||||||| || || || | |||||||||||
Sbjct: 17425 ctacaagggatggtaccatttcttctaccaatataacccaaacgcagccgtatgggg 17369
>emb|CQ805170.1| Sequence 1581 from Patent WO2004035798
Length = 1995
Score = 58.0 bits (29), Expect = 6e-006
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 258 ctacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatgggg 314
||||||||| ||||||||||||||||||||||| || || || | |||||||||||
Sbjct: 423 ctacaagggatggtaccatttcttctaccaatataacccaaacgcagccgtatgggg 479
>ref|NM_101096.2| Arabidopsis thaliana ATBETAFRUCT4; beta-fructofuranosidase/
hydrolase, hydrolyzing O-glycosyl compounds AT1G12240
(ATBETAFRUCT4) mRNA, complete cds
Length = 2229
Score = 58.0 bits (29), Expect = 6e-006
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 258 ctacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatgggg 314
||||||||| ||||||||||||||||||||||| || || || | |||||||||||
Sbjct: 470 ctacaagggatggtaccatttcttctaccaatataacccaaacgcagccgtatgggg 526
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 58.0 bits (29), Expect = 6e-006
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 258 ctacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatgggg 314
||||||||| ||||||||||||||||||||||| || || || | |||||||||||
Sbjct: 4155098 ctacaagggatggtaccatttcttctaccaatataacccaaacgcagccgtatgggg 4155154
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 262 aaggggtggtaccatttcttctaccaatacaa 293
||||| ||||||||||||||||| ||||||||
Sbjct: 23205111 aagggatggtaccatttcttctatcaatacaa 23205142
>gb|AU239205.1|AU239205 AU239205 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-61-I02 5',
mRNA sequence
Length = 354
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 271 taccatttcttctaccaatacaatcccaa 299
|||||| ||||||||||||||||||||||
Sbjct: 303 taccatctcttctaccaatacaatcccaa 331
>gb|BP825765.1|BP825765 BP825765 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-69-K16 5',
mRNA sequence
Length = 381
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 271 taccatttcttctaccaatacaatcccaa 299
|||||| ||||||||||||||||||||||
Sbjct: 333 taccatctcttctaccaatacaatcccaa 361
>gb|AV822292.1|AV822292 AV822292 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-04-G22 5',
mRNA sequence
Length = 666
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 262 aaggggtggtaccatttcttctaccaatacaa 293
||||| ||||||||||||||||| ||||||||
Sbjct: 423 aagggatggtaccatttcttctatcaatacaa 454
>gb|AV824486.1|AV824486 AV824486 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-71-A03 5',
mRNA sequence
Length = 650
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 262 aaggggtggtaccatttcttctaccaatacaa 293
||||| ||||||||||||||||| ||||||||
Sbjct: 372 aagggatggtaccatttcttctatcaatacaa 403
>gb|AV826151.1|AV826151 AV826151 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-10-D22 5',
mRNA sequence
Length = 624
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 262 aaggggtggtaccatttcttctaccaatacaa 293
||||| ||||||||||||||||| ||||||||
Sbjct: 416 aagggatggtaccatttcttctatcaatacaa 447
>gb|AV826374.1|AV826374 AV826374 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-13-K06 5',
mRNA sequence
Length = 614
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 262 aaggggtggtaccatttcttctaccaatacaa 293
||||| ||||||||||||||||| ||||||||
Sbjct: 420 aagggatggtaccatttcttctatcaatacaa 451
>gb|AV826457.1|AV826457 AV826457 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-15-K01 5',
mRNA sequence
Length = 634
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 262 aaggggtggtaccatttcttctaccaatacaa 293
||||| ||||||||||||||||| ||||||||
Sbjct: 422 aagggatggtaccatttcttctatcaatacaa 453
>gb|AV553248.1|AV553248 AV553248 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ57h10R 5', mRNA sequence
Length = 362
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 262 aaggggtggtaccatttcttctaccaatacaa 293
||||| ||||||||||||||||| ||||||||
Sbjct: 55 aagggatggtaccatttcttctatcaatacaa 86
>emb|X95537.1|ATBFRUC A.thaliana mRNa for beta-fructosidase
Length = 2092
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 262 aaggggtggtaccatttcttctaccaatacaa 293
||||| ||||||||||||||||| ||||||||
Sbjct: 357 aagggatggtaccatttcttctatcaatacaa 388
>emb|X99111.1|ATBETAFRU A.thaliana gene coding for beta-fructosidase
Length = 11937
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 262 aaggggtggtaccatttcttctaccaatacaa 293
||||| ||||||||||||||||| ||||||||
Sbjct: 7097 aagggatggtaccatttcttctatcaatacaa 7128
>emb|X89454.1|ATBFRUCT Arabidopsis thaliana mRNA for Beta-fructosidase
Length = 1890
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 262 aaggggtggtaccatttcttctaccaatacaa 293
||||| ||||||||||||||||| ||||||||
Sbjct: 126 aagggatggtaccatttcttctatcaatacaa 157
>gb|AY039610.1| Arabidopsis thaliana At1g62660/F23N19_3 mRNA, complete cds
Length = 2233
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 262 aaggggtggtaccatttcttctaccaatacaa 293
||||| ||||||||||||||||| ||||||||
Sbjct: 422 aagggatggtaccatttcttctatcaatacaa 453
>gb|AY048269.1| Arabidopsis thaliana At1g62660/F23N19_3 mRNA, complete cds
Length = 2102
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 262 aaggggtggtaccatttcttctaccaatacaa 293
||||| ||||||||||||||||| ||||||||
Sbjct: 415 aagggatggtaccatttcttctatcaatacaa 446
>gb|AY062481.1| Arabidopsis thaliana putative beta-fructosidase (At1g62660;
T3P18.21) mRNA, complete cds
Length = 2329
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 262 aaggggtggtaccatttcttctaccaatacaa 293
||||| ||||||||||||||||| ||||||||
Sbjct: 613 aagggatggtaccatttcttctatcaatacaa 644
>gb|AY063904.1| Arabidopsis thaliana putative beta-fructosidase (At1g62660) mRNA,
complete cds
Length = 2118
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 262 aaggggtggtaccatttcttctaccaatacaa 293
||||| ||||||||||||||||| ||||||||
Sbjct: 419 aagggatggtaccatttcttctatcaatacaa 450
>gb|AY114066.1| Arabidopsis thaliana putative beta-fructosidase (At1g62660) mRNA,
complete cds
Length = 1978
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 262 aaggggtggtaccatttcttctaccaatacaa 293
||||| ||||||||||||||||| ||||||||
Sbjct: 382 aagggatggtaccatttcttctatcaatacaa 413
>gb|BT000509.1| Arabidopsis thaliana beta-fructosidase (At1g62660/F23N19_3) mRNA,
complete cds
Length = 1947
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 262 aaggggtggtaccatttcttctaccaatacaa 293
||||| ||||||||||||||||| ||||||||
Sbjct: 382 aagggatggtaccatttcttctatcaatacaa 413
>emb|AX507631.1| Sequence 2326 from Patent WO0216655
Length = 1938
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 262 aaggggtggtaccatttcttctaccaatacaa 293
||||| ||||||||||||||||| ||||||||
Sbjct: 373 aagggatggtaccatttcttctatcaatacaa 404
>gb|AC005698.1|AC005698 Genomic sequence for Arabidopsis thaliana BAC T3P18 from Chromosome 1,
complete sequence
Length = 97054
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 262 aaggggtggtaccatttcttctaccaatacaa 293
||||| ||||||||||||||||| ||||||||
Sbjct: 92436 aagggatggtaccatttcttctatcaatacaa 92467
>gb|AC007190.4|AC007190 Genomic sequence for Arabidopsis thaliana BAC F23N19 from chromosome I,
complete sequence
Length = 86801
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 262 aaggggtggtaccatttcttctaccaatacaa 293
||||| ||||||||||||||||| ||||||||
Sbjct: 14414 aagggatggtaccatttcttctatcaatacaa 14445
>emb|CQ804994.1| Sequence 1405 from Patent WO2004035798
Length = 1947
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 262 aaggggtggtaccatttcttctaccaatacaa 293
||||| ||||||||||||||||| ||||||||
Sbjct: 382 aagggatggtaccatttcttctatcaatacaa 413
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 262 aaggggtggtaccatttcttctaccaatacaa 293
||||| ||||||||||||||||| ||||||||
Sbjct: 7442762 aagggatggtaccatttcttctatcaatacaa 7442793
>ref|NM_104943.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT1G62660 mRNA, complete cds
Length = 2428
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 262 aaggggtggtaccatttcttctaccaatacaa 293
||||| ||||||||||||||||| ||||||||
Sbjct: 613 aagggatggtaccatttcttctatcaatacaa 644
>gb|AQ960766.1|AQ960766 LERFH13TF LERA Arabidopsis thaliana genomic clone LERFH13, DNA
sequence
Length = 524
Score = 44.1 bits (22), Expect = 0.094
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 258 ctacaaggggtggtaccatttcttctacca 287
||||||||| |||| |||||||||||||||
Sbjct: 207 ctacaagggatggttccatttcttctacca 178
>gb|CL494107.1|CL494107 SAIL_58_B11.v2 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_58_B11.v2, DNA sequence
Length = 1041
Score = 42.1 bits (21), Expect = 0.37
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 816 gggcggcgcgccgcgcgcggg 836
|||||||||||||||||||||
Sbjct: 335 gggcggcgcgccgcgcgcggg 315
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 561,008
Number of Sequences: 1013581
Number of extensions: 561008
Number of successful extensions: 45508
Number of sequences better than 0.5: 48
Number of HSP's better than 0.5 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44352
Number of HSP's gapped (non-prelim): 1146
length of query: 2027
length of database: 908,940,872
effective HSP length: 21
effective length of query: 2006
effective length of database: 887,655,671
effective search space: 1780637276026
effective search space used: 1780637276026
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)