BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478398.2.5
(1385 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|L22563.1|ATHCKIB Arabidopsis thaliana casein kinase II b... 254 4e-065
ref|NM_124079.2| Arabidopsis thaliana CKB1; protein kinase ... 254 4e-065
emb|BX830065.1|CNS0A25O Arabidopsis thaliana Full-length cD... 192 1e-046
ref|NM_203167.1| Arabidopsis thaliana CKB1; protein kinase ... 192 1e-046
ref|NM_001036949.1| Arabidopsis thaliana CKB1; protein kina... 192 1e-046
gb|U03984.1|ATU03984 Arabidopsis thaliana casein kinase II ... 190 4e-046
gb|BT005279.1| Arabidopsis thaliana At4g17640 mRNA, complet... 190 4e-046
gb|AY085899.1| Arabidopsis thaliana clone 19505 mRNA, compl... 190 4e-046
emb|BX827683.1|CNS0A2YU Arabidopsis thaliana Full-length cD... 190 4e-046
dbj|AK119067.1| Arabidopsis thaliana At4g17640 mRNA for put... 190 4e-046
ref|NM_117872.2| Arabidopsis thaliana CKB2; protein kinase ... 190 4e-046
gb|CF651755.1|CF651755 04-L020359-066-002-G01-SP6P MPIZ-ADI... 186 7e-045
gb|AY052265.1| Arabidopsis thaliana At2g44680/F16B22.17 mRN... 186 7e-045
gb|AY060523.1| Arabidopsis thaliana At2g44680/F16B22.17 mRN... 186 7e-045
gb|AY062585.1| Arabidopsis thaliana putative casein kinase ... 186 7e-045
gb|AY093344.1| Arabidopsis thaliana putative casein kinase ... 186 7e-045
emb|AX507695.1| Sequence 2390 from Patent WO0216655 186 7e-045
gb|AY088075.1| Arabidopsis thaliana clone 40953 mRNA, compl... 186 7e-045
ref|NM_130032.2| Arabidopsis thaliana protein kinase CK2 re... 186 7e-045
ref|NM_180090.1| Arabidopsis thaliana protein kinase CK2 re... 186 7e-045
gb|AF068318.1|AF068318 Arabidopsis thaliana regulatory subu... 161 4e-037
emb|CQ803654.1| Sequence 65 from Patent WO2004035798 161 4e-037
ref|NM_115889.3| Arabidopsis thaliana CKB3; protein kinase ... 161 4e-037
gb|AV824835.1|AV824835 AV824835 RAFL6 Arabidopsis thaliana ... 141 4e-031
gb|AV551311.1|AV551311 AV551311 Arabidopsis thaliana roots ... 135 2e-029
dbj|AB025609.1| Arabidopsis thaliana genomic DNA, chromosom... 133 9e-029
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 133 9e-029
gb|AU237720.1|AU237720 AU237720 RAFL16 Arabidopsis thaliana... 127 6e-027
gb|AC003672.3| Arabidopsis thaliana chromosome 2 clone F16B... 127 6e-027
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 127 6e-027
emb|BX832248.1|CNS0A285 Arabidopsis thaliana Full-length cD... 113 8e-023
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 111 3e-022
emb|AL163852.1|ATF27H5 Arabidopsis thaliana DNA chromosome ... 111 3e-022
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 111 3e-022
gb|CB259616.1|CB259616 35-E9536-013-002-F09-T7R MPIZ-ADIS-0... 109 1e-021
gb|AI993201.1|AI993201 701495685 A. thaliana, Ohio State cl... 107 5e-021
gb|AV825757.1|AV825757 AV825757 RAFL7 Arabidopsis thaliana ... 107 5e-021
gb|AI993910.1|AI993910 701493356 A. thaliana, Ohio State cl... 105 2e-020
gb|AF263518.1|AF263518 Arabidopsis thaliana protein synthes... 105 2e-020
gb|T42848.1|T42848 6111 Lambda-PRL2 Arabidopsis thaliana cD... 100 1e-018
gb|T42705.1|T42705 5968 Lambda-PRL2 Arabidopsis thaliana cD... 96 2e-017
gb|AV792274.1|AV792274 AV792274 RAFL7 Arabidopsis thaliana ... 96 2e-017
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 96 2e-017
emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosom... 96 2e-017
emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ... 96 2e-017
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 96 2e-017
gb|AU239951.1|AU239951 AU239951 RAFL21 Arabidopsis thaliana... 92 3e-016
emb|AL089456.1|CNS00TAQ Arabidopsis thaliana genome survey ... 90 1e-015
gb|BP791893.1|BP791893 BP791893 RAFL7 Arabidopsis thaliana ... 90 1e-015
emb|BX822193.1|CNS0A6ZY Arabidopsis thaliana Full-length cD... 90 1e-015
gb|H37389.1|H37389 15518 Lambda-PRL2 Arabidopsis thaliana c... 84 7e-014
gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E1... 74 7e-011
gb|BX840183.1|BX840183 BX840183 Arabidopsis thaliana Hormon... 72 3e-010
gb|T45841.1|T45841 9104 Lambda-PRL2 Arabidopsis thaliana cD... 70 1e-009
gb|Z34116.1|Z34116 ATTS3150 Grenoble-B Arabidopsis thaliana... 68 4e-009
gb|BH911167.1|BH911167 SALK_065565.53.45.x Arabidopsis thal... 66 2e-008
emb|AL770779.1| Arabidopsis thaliana T-DNA flanking sequenc... 66 2e-008
gb|AV546475.1|AV546475 AV546475 Arabidopsis thaliana roots ... 64 7e-008
gb|CC797462.1|CC797462 SALK_144967.54.25.x Arabidopsis thal... 58 4e-006
gb|CW795532.1|CW795532 WiscDsLox449D01 Arabidopsis thaliana... 54 7e-005
gb|BE526951.1|BE526951 M66B05STM Arabidopsis developing see... 52 3e-004
emb|AJ527175.1|ATH527175 Arabidopsis thaliana T-DNA flankin... 52 3e-004
gb|AI996697.1|AI996697 701667982 A. thaliana, Columbia Col-... 50 0.001
gb|AU231314.1|AU231314 AU231314 RAFL21 Arabidopsis thaliana... 46 0.016
gb|BP636476.1|BP636476 BP636476 RAFL18 Arabidopsis thaliana... 46 0.016
gb|BP834317.1|BP834317 BP834317 RAFL19 Arabidopsis thaliana... 42 0.25
emb|BX831794.1|CNS0A14B Arabidopsis thaliana Full-length cD... 42 0.25
>gb|L22563.1|ATHCKIB Arabidopsis thaliana casein kinase II beta subunit CKB1 mRNA,
complete cds
Length = 1285
Score = 254 bits (128), Expect = 4e-065
Identities = 446/552 (80%)
Strand = Plus / Plus
Query: 375 gatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatgg 434
|||||||||| ||||||||| ||||| ||||||||||| ||||| || ||||| || |||
Sbjct: 393 gatagtgaagaatcagatgtgagtggttctgatggagaggacacttcatggatatcttgg 452
Query: 435 tattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagac 494
| ||| || ||||||| || |||||||| |||||||| |||||||| |||||||||||
Sbjct: 453 ttttgtaatctaagaggaaacgagttcttttgtgaagttgatgatgattacattcaagat 512
Query: 495 gacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctc 554
||||||||| | ||||| |||||||| | |||||| || || || || ||||| ||| |
Sbjct: 513 gacttcaacttgtgtggactcagcagtctagttccctactacgagtacgctcttgatttg 572
Query: 555 attttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcgga 614
||||| ||| ||||||| ||||| || || ||||| || |||||||| ||||| |
Sbjct: 573 attttggatgttgaatcttctcaaggagagatgtttacagaggaacagaatgaattgatc 632
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaa 674
|| ||||| || |||||| | ||||| ||||| ||||| || ||||| |||| || |||
Sbjct: 633 gagtcagcagctgagatgttgtatggactgattcatgctcgttacatattgactagcaaa 692
Query: 675 ggactggctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtgtt 734
||| |||| |||||| | || || || || |||||||||||||| | || || | |||
Sbjct: 693 ggattggcagcaatgttagacaaatacaaaaactatgactttggaagatgtccaagagtt 752
Query: 735 tactgctgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagtacc 794
|| |||||||| ||||| || || || ||||| ||||||||| | | |||||||| ||
Sbjct: 753 tattgctgtggccaaccttgtcttccggttggtcaatcagacttaccgcgatctagcact 812
Query: 795 gtgaagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaaggc 854
||||||||||| ||||| || || |||||||| || |||||||| || ||||| ||||||
Sbjct: 813 gtgaagatatattgcccgaaatgcgaagacatttattacccacgatcaaagtatcaaggc 872
Query: 855 aacatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacatacgag 914
||||| || || || ||||||||||||||||| || ||||||||||||||||| || | |
Sbjct: 873 aacattgatggagcttactttgggacaacgtttccacatctgttcctgatgacttatggg 932
Query: 915 cacctcaagcca 926
|| |||||||||
Sbjct: 933 catctcaagcca 944
>ref|NM_124079.2| Arabidopsis thaliana CKB1; protein kinase CK2 regulator AT5G47080
(CKB1) transcript variant AT5G47080.1 mRNA, complete cds
Length = 1372
Score = 254 bits (128), Expect = 4e-065
Identities = 446/552 (80%)
Strand = Plus / Plus
Query: 375 gatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatgg 434
|||||||||| ||||||||| ||||| ||||||||||| ||||| || ||||| || |||
Sbjct: 404 gatagtgaagaatcagatgtgagtggttctgatggagaggacacttcatggatatcttgg 463
Query: 435 tattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagac 494
| ||| || ||||||| || |||||||| |||||||| |||||||| |||||||||||
Sbjct: 464 ttttgtaatctaagaggaaacgagttcttttgtgaagttgatgatgattacattcaagat 523
Query: 495 gacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctc 554
||||||||| | ||||| |||||||| | |||||| || || || || ||||| ||| |
Sbjct: 524 gacttcaacttgtgtggactcagcagtctagttccctactacgagtacgctcttgatttg 583
Query: 555 attttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcgga 614
||||| ||| ||||||| ||||| || || ||||| || |||||||| ||||| |
Sbjct: 584 attttggatgttgaatcttctcaaggagagatgtttacagaggaacagaatgaattgatc 643
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaa 674
|| ||||| || |||||| | ||||| ||||| ||||| || ||||| |||| || |||
Sbjct: 644 gagtcagcagctgagatgttgtatggactgattcatgctcgttacatattgactagcaaa 703
Query: 675 ggactggctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtgtt 734
||| |||| |||||| | || || || || |||||||||||||| | || || | |||
Sbjct: 704 ggattggcagcaatgttagacaaatacaaaaactatgactttggaagatgtccaagagtt 763
Query: 735 tactgctgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagtacc 794
|| |||||||| ||||| || || || ||||| ||||||||| | | |||||||| ||
Sbjct: 764 tattgctgtggccaaccttgtcttccggttggtcaatcagacttaccgcgatctagcact 823
Query: 795 gtgaagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaaggc 854
||||||||||| ||||| || || |||||||| || |||||||| || ||||| ||||||
Sbjct: 824 gtgaagatatattgcccgaaatgcgaagacatttattacccacgatcaaagtatcaaggc 883
Query: 855 aacatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacatacgag 914
||||| || || || ||||||||||||||||| || ||||||||||||||||| || | |
Sbjct: 884 aacattgatggagcttactttgggacaacgtttccacatctgttcctgatgacttatggg 943
Query: 915 cacctcaagcca 926
|| |||||||||
Sbjct: 944 catctcaagcca 955
>emb|BX830065.1|CNS0A25O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB57ZB07 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1408
Score = 192 bits (97), Expect = 1e-046
Identities = 385/481 (80%)
Strand = Plus / Plus
Query: 375 gatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatgg 434
|||||||||| ||||||||||||| | ||||||||||| ||||| || ||||| || |||
Sbjct: 398 gatagtgaagaatcagatgttagttgttctgatggagaggacacttcatggatatcttgg 457
Query: 435 tattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagac 494
| ||| || ||||||| || |||||||| |||||||| |||||||| |||||||||||
Sbjct: 458 ttttgtaatctaagaggaaacgagttcttttgtgaagttgatgatgattacattcaagat 517
Query: 495 gacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctc 554
||||||||| | ||||| |||||||| | |||||| || || || || ||||| ||| |
Sbjct: 518 gacttcaacttgtgtggactcagcagtctagttccctactacgagtacgctcttgatttg 577
Query: 555 attttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcgga 614
||||| ||| ||||||| ||||| || || ||||| || |||||||| ||||| |
Sbjct: 578 attttggatgttgaatcttctcaaggagagatgtttacagaggaacagaatgaattgatc 637
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaa 674
|| ||||| || |||||| | ||||| ||||| ||||| || ||||| |||| || |||
Sbjct: 638 gagtcagcagctgagatgttgtatggactgattcatgctcgttacatattgactagcaaa 697
Query: 675 ggactggctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtgtt 734
||| |||| |||||| | || || || || |||||||||||||| | || || | |||
Sbjct: 698 ggattggcagcaatgttagacaaatacaaaaactatgactttggaagatgtccaagagtt 757
Query: 735 tactgctgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagtacc 794
|| |||||||| ||||| || || || ||||| ||||||||| | | |||||||||||
Sbjct: 758 tattgctgtggccaaccttgtcttccggttggtcaatcagacttaccgcgatctagtact 817
Query: 795 gtgaagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaaggc 854
|||||| |||| ||||| || || |||||||| || |||||||| || ||||| ||||||
Sbjct: 818 gtgaaggtatattgcccgaaatgcgaagacatttattacccacgatcaaagtatcaaggc 877
Query: 855 a 855
|
Sbjct: 878 a 878
Score = 65.9 bits (33), Expect = 2e-008
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 870 tactttgggacaacgttccctcatctgttcctgatgacatacgagcacctcaagcca 926
||||||||||||||||| || ||||||||||||||||| || | ||| |||||||||
Sbjct: 1062 tactttgggacaacgtttccacatctgttcctgatgacttatgggcatctcaagcca 1118
>ref|NM_203167.1| Arabidopsis thaliana CKB1; protein kinase CK2 regulator AT5G47080
(CKB1) transcript variant AT5G47080.2 mRNA, complete cds
Length = 1562
Score = 192 bits (97), Expect = 1e-046
Identities = 385/481 (80%)
Strand = Plus / Plus
Query: 375 gatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatgg 434
|||||||||| ||||||||| ||||| ||||||||||| ||||| || ||||| || |||
Sbjct: 425 gatagtgaagaatcagatgtgagtggttctgatggagaggacacttcatggatatcttgg 484
Query: 435 tattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagac 494
| ||| || ||||||| || |||||||| |||||||| |||||||| |||||||||||
Sbjct: 485 ttttgtaatctaagaggaaacgagttcttttgtgaagttgatgatgattacattcaagat 544
Query: 495 gacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctc 554
||||||||| | ||||| |||||||| | |||||| || || || || ||||| ||| |
Sbjct: 545 gacttcaacttgtgtggactcagcagtctagttccctactacgagtacgctcttgatttg 604
Query: 555 attttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcgga 614
||||| ||| ||||||| ||||| || || ||||| || |||||||| ||||| |
Sbjct: 605 attttggatgttgaatcttctcaaggagagatgtttacagaggaacagaatgaattgatc 664
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaa 674
|| ||||| || |||||| | ||||| ||||| ||||| || ||||| |||| || |||
Sbjct: 665 gagtcagcagctgagatgttgtatggactgattcatgctcgttacatattgactagcaaa 724
Query: 675 ggactggctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtgtt 734
||| |||| |||||| | || || || || |||||||||||||| | || || | |||
Sbjct: 725 ggattggcagcaatgttagacaaatacaaaaactatgactttggaagatgtccaagagtt 784
Query: 735 tactgctgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagtacc 794
|| |||||||| ||||| || || || ||||| ||||||||| | | |||||||| ||
Sbjct: 785 tattgctgtggccaaccttgtcttccggttggtcaatcagacttaccgcgatctagcact 844
Query: 795 gtgaagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaaggc 854
||||||||||| ||||| || || |||||||| || |||||||| || ||||| ||||||
Sbjct: 845 gtgaagatatattgcccgaaatgcgaagacatttattacccacgatcaaagtatcaaggc 904
Query: 855 a 855
|
Sbjct: 905 a 905
Score = 65.9 bits (33), Expect = 2e-008
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 870 tactttgggacaacgttccctcatctgttcctgatgacatacgagcacctcaagcca 926
||||||||||||||||| || ||||||||||||||||| || | ||| |||||||||
Sbjct: 1089 tactttgggacaacgtttccacatctgttcctgatgacttatgggcatctcaagcca 1145
>ref|NM_001036949.1| Arabidopsis thaliana CKB1; protein kinase CK2 regulator AT5G47080
(CKB1) transcript variant AT5G47080.3 mRNA, complete cds
Length = 1595
Score = 192 bits (97), Expect = 1e-046
Identities = 385/481 (80%)
Strand = Plus / Plus
Query: 375 gatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatgg 434
|||||||||| ||||||||| ||||| ||||||||||| ||||| || ||||| || |||
Sbjct: 458 gatagtgaagaatcagatgtgagtggttctgatggagaggacacttcatggatatcttgg 517
Query: 435 tattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagac 494
| ||| || ||||||| || |||||||| |||||||| |||||||| |||||||||||
Sbjct: 518 ttttgtaatctaagaggaaacgagttcttttgtgaagttgatgatgattacattcaagat 577
Query: 495 gacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctc 554
||||||||| | ||||| |||||||| | |||||| || || || || ||||| ||| |
Sbjct: 578 gacttcaacttgtgtggactcagcagtctagttccctactacgagtacgctcttgatttg 637
Query: 555 attttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcgga 614
||||| ||| ||||||| ||||| || || ||||| || |||||||| ||||| |
Sbjct: 638 attttggatgttgaatcttctcaaggagagatgtttacagaggaacagaatgaattgatc 697
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaa 674
|| ||||| || |||||| | ||||| ||||| ||||| || ||||| |||| || |||
Sbjct: 698 gagtcagcagctgagatgttgtatggactgattcatgctcgttacatattgactagcaaa 757
Query: 675 ggactggctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtgtt 734
||| |||| |||||| | || || || || |||||||||||||| | || || | |||
Sbjct: 758 ggattggcagcaatgttagacaaatacaaaaactatgactttggaagatgtccaagagtt 817
Query: 735 tactgctgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagtacc 794
|| |||||||| ||||| || || || ||||| ||||||||| | | |||||||| ||
Sbjct: 818 tattgctgtggccaaccttgtcttccggttggtcaatcagacttaccgcgatctagcact 877
Query: 795 gtgaagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaaggc 854
||||||||||| ||||| || || |||||||| || |||||||| || ||||| ||||||
Sbjct: 878 gtgaagatatattgcccgaaatgcgaagacatttattacccacgatcaaagtatcaaggc 937
Query: 855 a 855
|
Sbjct: 938 a 938
Score = 65.9 bits (33), Expect = 2e-008
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 870 tactttgggacaacgttccctcatctgttcctgatgacatacgagcacctcaagcca 926
||||||||||||||||| || ||||||||||||||||| || | ||| |||||||||
Sbjct: 1122 tactttgggacaacgtttccacatctgttcctgatgacttatgggcatctcaagcca 1178
>gb|U03984.1|ATU03984 Arabidopsis thaliana casein kinase II beta subunit CKB2 mRNA,
complete cds
Length = 1229
Score = 190 bits (96), Expect = 4e-046
Identities = 435/548 (79%)
Strand = Plus / Plus
Query: 381 gaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatggtattgc 440
|||| |||||| || ||||| ||||||||||| |||||||||||||| || |||| |||
Sbjct: 377 gaagaatcagaggtcagtggttctgatggagaggacacctcgtggatatcttggttctgc 436
Query: 441 aacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttc 500
||| | | ||||| ||||||||||||||||| |||||||| ||||| || || |||||
Sbjct: 437 aaccttcgtgggaacgagttcttctgtgaagttgatgatgattacatccaggatgacttt 496
Query: 501 aacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctcatttta 560
||| | ||||| |||||| ||||||||||| || || ||||| || ||| | |||||
Sbjct: 497 aacttgtgtggactcagccatcaagttccttactacgactatgcccttgatttgattttg 556
Query: 561 gatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatca 620
||| | || || || |||||||| ||||| || |||||||| ||||| | || |||
Sbjct: 557 gatgtggagtcttcgcatggtgagatgtttacagaggaacagaatgaattgatcgagtca 616
Query: 621 gctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaaggactg 680
|| ||||||||||| ||||| |||| ||||| || | ||| |||| || ||||| |||
Sbjct: 617 gcagcagagatgctatatggaatgattcatgctcgtttcatattgactagcaaagggctg 676
Query: 681 gctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgc 740
||| | ||| | || || || || |||||||||||||| | ||||| | ||||| ||
Sbjct: 677 gcttctatgttagacaaatacaaaaactatgactttggaagatgcccaagagtttattgt 736
Query: 741 tgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaag 800
||||| ||||| || | |||||||| ||||| || |||| | || | || ||||| |||
Sbjct: 737 tgtggccaaccttgtttaccagttggtcaatccgatatccctagagcaagcaccgtaaag 796
Query: 801 atatactgccccaagtgtgaagacatctactacccacggtccaagtaccaaggcaacatc 860
||||||||||| || |||||||| |||| |||||||| || || |||||||| |||||
Sbjct: 797 atatactgcccaaaatgtgaagatgtctattacccacgatcaaaataccaaggaaacata 856
Query: 861 gacggcgcatactttgggacaacgttccctcatctgttcctgatgacatacgagcacctc 920
|| || || ||||||||||||||||| || ||||||||| ||||||| |||| ||| ||
Sbjct: 857 gatggagcttactttgggacaacgtttccacatctgttcttgatgacgtacgggcatctg 916
Query: 921 aagccaca 928
||||||||
Sbjct: 917 aagccaca 924
>gb|BT005279.1| Arabidopsis thaliana At4g17640 mRNA, complete cds
Length = 849
Score = 190 bits (96), Expect = 4e-046
Identities = 435/548 (79%)
Strand = Plus / Plus
Query: 381 gaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatggtattgc 440
|||| |||||| || ||||| ||||||||||| |||||||||||||| || |||| |||
Sbjct: 244 gaagaatcagaggtcagtggttctgatggagaggacacctcgtggatatcttggttctgc 303
Query: 441 aacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttc 500
||| | | ||||| ||||||||||||||||| |||||||| ||||| || || |||||
Sbjct: 304 aaccttcgtgggaacgagttcttctgtgaagttgatgatgattacatccaggatgacttt 363
Query: 501 aacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctcatttta 560
||| | ||||| |||||| ||||||||||| || || ||||| || ||| | |||||
Sbjct: 364 aacttgtgtggactcagccatcaagttccttactacgactatgcccttgatttgattttg 423
Query: 561 gatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatca 620
||| | || || || |||||||| ||||| || |||||||| ||||| | || |||
Sbjct: 424 gatgtggagtcttcgcatggtgagatgtttacagaggaacagaatgaattgatcgagtca 483
Query: 621 gctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaaggactg 680
|| ||||||||||| ||||| |||| ||||| || | ||| |||| || ||||| |||
Sbjct: 484 gcagcagagatgctatatggaatgattcatgctcgtttcatattgactagcaaagggctg 543
Query: 681 gctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgc 740
||| | ||| | || || || || |||||||||||||| | ||||| | ||||| ||
Sbjct: 544 gcttctatgttagacaaatacaaaaactatgactttggaagatgcccaagagtttattgt 603
Query: 741 tgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaag 800
||||| ||||| || | |||||||| ||||| || |||| | || | || ||||| |||
Sbjct: 604 tgtggccaaccttgtttaccagttggtcaatccgatatccctagagcaagcaccgtaaag 663
Query: 801 atatactgccccaagtgtgaagacatctactacccacggtccaagtaccaaggcaacatc 860
||||||||||| || |||||||| |||| |||||||| || || |||||||| |||||
Sbjct: 664 atatactgcccaaaatgtgaagatgtctattacccacgatcaaaataccaaggaaacata 723
Query: 861 gacggcgcatactttgggacaacgttccctcatctgttcctgatgacatacgagcacctc 920
|| || || ||||||||||||||||| || ||||||||| ||||||| |||| ||| ||
Sbjct: 724 gatggagcttactttgggacaacgtttccacatctgttcttgatgacgtacgggcatctg 783
Query: 921 aagccaca 928
||||||||
Sbjct: 784 aagccaca 791
>gb|AY085899.1| Arabidopsis thaliana clone 19505 mRNA, complete sequence
Length = 1329
Score = 190 bits (96), Expect = 4e-046
Identities = 435/548 (79%)
Strand = Plus / Plus
Query: 381 gaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatggtattgc 440
|||| |||||| || ||||| ||||||||||| |||||||||||||| || |||| |||
Sbjct: 485 gaagaatcagaggtcagtggttctgatggagaggacacctcgtggatatcttggttctgc 544
Query: 441 aacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttc 500
||| | | ||||| ||||||||||||||||| |||||||| ||||| || || |||||
Sbjct: 545 aaccttcgtgggaacgagttcttctgtgaagttgatgatgattacatccaggatgacttt 604
Query: 501 aacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctcatttta 560
||| | ||||| |||||| ||||||||||| || || ||||| || ||| | |||||
Sbjct: 605 aacttgtgtggactcagccatcaagttccttactacgactatgcccttgatttgattttg 664
Query: 561 gatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatca 620
||| | || || || |||||||| ||||| || |||||||| ||||| | || |||
Sbjct: 665 gatgtggagtcttcgcatggtgagatgtttacagaggaacagaatgaattgatcgagtca 724
Query: 621 gctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaaggactg 680
|| ||||||||||| ||||| |||| ||||| || | ||| |||| || ||||| |||
Sbjct: 725 gcagcagagatgctatatggaatgattcatgctcgtttcatattgactagcaaagggctg 784
Query: 681 gctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgc 740
||| | ||| | || || || || |||||||||||||| | ||||| | ||||| ||
Sbjct: 785 gcttctatgttagacaaatacaaaaactatgactttggaagatgcccaagagtttattgt 844
Query: 741 tgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaag 800
||||| ||||| || | |||||||| ||||| || |||| | || | || ||||| |||
Sbjct: 845 tgtggccaaccttgtttaccagttggtcaatccgatatccctagagcaagcaccgtaaag 904
Query: 801 atatactgccccaagtgtgaagacatctactacccacggtccaagtaccaaggcaacatc 860
||||||||||| || |||||||| |||| |||||||| || || |||||||| |||||
Sbjct: 905 atatactgcccaaaatgtgaagatgtctattacccacgatcaaaataccaaggaaacata 964
Query: 861 gacggcgcatactttgggacaacgttccctcatctgttcctgatgacatacgagcacctc 920
|| || || ||||||||||||||||| || ||||||||| ||||||| |||| ||| ||
Sbjct: 965 gatggagcttactttgggacaacgtttccacatctgttcttgatgacgtacgggcatctg 1024
Query: 921 aagccaca 928
||||||||
Sbjct: 1025 aagccaca 1032
>emb|BX827683.1|CNS0A2YU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH10ZB06 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1166
Score = 190 bits (96), Expect = 4e-046
Identities = 435/548 (79%)
Strand = Plus / Plus
Query: 381 gaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatggtattgc 440
|||| |||||| || ||||| ||||||||||| |||||||||||||| || |||| |||
Sbjct: 277 gaagaatcagaggtcagtggttctgatggagaggacacctcgtggatatcttggttctgc 336
Query: 441 aacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttc 500
||| | | ||||| ||||||||||||||||| |||||||| ||||| || || |||||
Sbjct: 337 aaccttcgtgggaacgagttcttctgtgaagttgatgatgattacatccaggatgacttt 396
Query: 501 aacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctcatttta 560
||| | ||||| |||||| ||||||||||| || || ||||| || ||| | |||||
Sbjct: 397 aacttgtgtggactcagccatcaagttccttactacgactatgcccttgatttgattttg 456
Query: 561 gatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatca 620
||| | || || || |||||||| ||||| || |||||||| ||||| | || |||
Sbjct: 457 gatgtggagtcttcgcatggtgagatgtttacagaggaacagaatgaattgatcgagtca 516
Query: 621 gctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaaggactg 680
|| ||||||||||| ||||| |||| ||||| || | ||| |||| || ||||| |||
Sbjct: 517 gcagcagagatgctatatggaatgattcatgctcgtttcatattgactagcaaagggctg 576
Query: 681 gctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgc 740
||| | ||| | || || || || |||||||||||||| | ||||| | ||||| ||
Sbjct: 577 gcttctatgttagacaaatacaaaaactatgactttggaagatgcccaagagtttattgt 636
Query: 741 tgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaag 800
||||| ||||| || | |||||||| ||||| || |||| | || | || ||||| |||
Sbjct: 637 tgtggccaaccttgtttaccagttggtcaatccgatatccctagagcaagcaccgtaaag 696
Query: 801 atatactgccccaagtgtgaagacatctactacccacggtccaagtaccaaggcaacatc 860
||||||||||| || |||||||| |||| |||||||| || || |||||||| |||||
Sbjct: 697 atatactgcccaaaatgtgaagatgtctattacccacgatcaaaataccaaggaaacata 756
Query: 861 gacggcgcatactttgggacaacgttccctcatctgttcctgatgacatacgagcacctc 920
|| || || ||||||||||||||||| || ||||||||| ||||||| |||| ||| ||
Sbjct: 757 gatggagcttactttgggacaacgtttccacatctgttcttgatgacgtacgggcatctg 816
Query: 921 aagccaca 928
||||||||
Sbjct: 817 aagccaca 824
>dbj|AK119067.1| Arabidopsis thaliana At4g17640 mRNA for putative casein kinase II
beta chain CKB2, complete cds, clone: RAFL21-41-H19
Length = 1212
Score = 190 bits (96), Expect = 4e-046
Identities = 435/548 (79%)
Strand = Plus / Plus
Query: 381 gaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatggtattgc 440
|||| |||||| || ||||| ||||||||||| |||||||||||||| || |||| |||
Sbjct: 324 gaagaatcagaggtcagtggttctgatggagaggacacctcgtggatatcttggttctgc 383
Query: 441 aacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttc 500
||| | | ||||| ||||||||||||||||| |||||||| ||||| || || |||||
Sbjct: 384 aaccttcgtgggaacgagttcttctgtgaagttgatgatgattacatccaggatgacttt 443
Query: 501 aacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctcatttta 560
||| | ||||| |||||| ||||||||||| || || ||||| || ||| | |||||
Sbjct: 444 aacttgtgtggactcagccatcaagttccttactacgactatgcccttgatttgattttg 503
Query: 561 gatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatca 620
||| | || || || |||||||| ||||| || |||||||| ||||| | || |||
Sbjct: 504 gatgtggagtcttcgcatggtgagatgtttacagaggaacagaatgaattgatcgagtca 563
Query: 621 gctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaaggactg 680
|| ||||||||||| ||||| |||| ||||| || | ||| |||| || ||||| |||
Sbjct: 564 gcagcagagatgctatatggaatgattcatgctcgtttcatattgactagcaaagggctg 623
Query: 681 gctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgc 740
||| | ||| | || || || || |||||||||||||| | ||||| | ||||| ||
Sbjct: 624 gcttctatgttagacaaatacaaaaactatgactttggaagatgcccaagagtttattgt 683
Query: 741 tgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaag 800
||||| ||||| || | |||||||| ||||| || |||| | || | || ||||| |||
Sbjct: 684 tgtggccaaccttgtttaccagttggtcaatccgatatccctagagcaagcaccgtaaag 743
Query: 801 atatactgccccaagtgtgaagacatctactacccacggtccaagtaccaaggcaacatc 860
||||||||||| || |||||||| |||| |||||||| || || |||||||| |||||
Sbjct: 744 atatactgcccaaaatgtgaagatgtctattacccacgatcaaaataccaaggaaacata 803
Query: 861 gacggcgcatactttgggacaacgttccctcatctgttcctgatgacatacgagcacctc 920
|| || || ||||||||||||||||| || ||||||||| ||||||| |||| ||| ||
Sbjct: 804 gatggagcttactttgggacaacgtttccacatctgttcttgatgacgtacgggcatctg 863
Query: 921 aagccaca 928
||||||||
Sbjct: 864 aagccaca 871
>ref|NM_117872.2| Arabidopsis thaliana CKB2; protein kinase CK2 regulator AT4G17640
(CKB2) mRNA, complete cds
Length = 1374
Score = 190 bits (96), Expect = 4e-046
Identities = 435/548 (79%)
Strand = Plus / Plus
Query: 381 gaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatggtattgc 440
|||| |||||| || ||||| ||||||||||| |||||||||||||| || |||| |||
Sbjct: 485 gaagaatcagaggtcagtggttctgatggagaggacacctcgtggatatcttggttctgc 544
Query: 441 aacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttc 500
||| | | ||||| ||||||||||||||||| |||||||| ||||| || || |||||
Sbjct: 545 aaccttcgtgggaacgagttcttctgtgaagttgatgatgattacatccaggatgacttt 604
Query: 501 aacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctcatttta 560
||| | ||||| |||||| ||||||||||| || || ||||| || ||| | |||||
Sbjct: 605 aacttgtgtggactcagccatcaagttccttactacgactatgcccttgatttgattttg 664
Query: 561 gatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatca 620
||| | || || || |||||||| ||||| || |||||||| ||||| | || |||
Sbjct: 665 gatgtggagtcttcgcatggtgagatgtttacagaggaacagaatgaattgatcgagtca 724
Query: 621 gctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaaggactg 680
|| ||||||||||| ||||| |||| ||||| || | ||| |||| || ||||| |||
Sbjct: 725 gcagcagagatgctatatggaatgattcatgctcgtttcatattgactagcaaagggctg 784
Query: 681 gctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgc 740
||| | ||| | || || || || |||||||||||||| | ||||| | ||||| ||
Sbjct: 785 gcttctatgttagacaaatacaaaaactatgactttggaagatgcccaagagtttattgt 844
Query: 741 tgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaag 800
||||| ||||| || | |||||||| ||||| || |||| | || | || ||||| |||
Sbjct: 845 tgtggccaaccttgtttaccagttggtcaatccgatatccctagagcaagcaccgtaaag 904
Query: 801 atatactgccccaagtgtgaagacatctactacccacggtccaagtaccaaggcaacatc 860
||||||||||| || |||||||| |||| |||||||| || || |||||||| |||||
Sbjct: 905 atatactgcccaaaatgtgaagatgtctattacccacgatcaaaataccaaggaaacata 964
Query: 861 gacggcgcatactttgggacaacgttccctcatctgttcctgatgacatacgagcacctc 920
|| || || ||||||||||||||||| || ||||||||| ||||||| |||| ||| ||
Sbjct: 965 gatggagcttactttgggacaacgtttccacatctgttcttgatgacgtacgggcatctg 1024
Query: 921 aagccaca 928
||||||||
Sbjct: 1025 aagccaca 1032
>gb|CF651755.1|CF651755 04-L020359-066-002-G01-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001G012Q 5-PRIME, mRNA sequence
Length = 902
Score = 186 bits (94), Expect = 7e-045
Identities = 277/338 (81%)
Strand = Plus / Plus
Query: 375 gatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatgg 434
|||||||||| ||||||||| ||||| || || || || || ||||| ||||| ||||||
Sbjct: 56 gatagtgaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatgg 115
Query: 435 tattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagac 494
| ||| || || |||||||||||||| ||||||||||| ||||| || || || |||||
Sbjct: 116 ttttgtaatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagat 175
Query: 495 gacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctc 554
|| ||||| || ||||| | || | ||||||||||| ||||||||||| || ||||||
Sbjct: 176 gatttcaatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctc 235
Query: 555 attttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcgga 614
||||||||| |||||||||| ||||||||||||| ||||| ||||| ||||| | |
Sbjct: 236 attttagatgttgaatcatcaaatggtgatatgtttactgaagaacagcatgagatggtg 295
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaa 674
||||||||||| |||||| | ||||| || || |||| || || ||||| || | ||||
Sbjct: 296 gaatcagctgctgagatgttatatggtcttattcatgttcgttatattctcactactaaa 355
Query: 675 ggactggctgcaatgctggagaagtataagaactatga 712
||| ||||||| ||| |||||||||||||||| |||||
Sbjct: 356 ggaatggctgctatgatggagaagtataagaattatga 393
>gb|AY052265.1| Arabidopsis thaliana At2g44680/F16B22.17 mRNA, complete cds
Length = 1297
Score = 186 bits (94), Expect = 7e-045
Identities = 277/338 (81%)
Strand = Plus / Plus
Query: 375 gatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatgg 434
|||||||||| ||||||||| ||||| || || || || || ||||| ||||| ||||||
Sbjct: 426 gatagtgaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatgg 485
Query: 435 tattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagac 494
| ||| || || |||||||||||||| ||||||||||| ||||| || || || |||||
Sbjct: 486 ttttgtaatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagat 545
Query: 495 gacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctc 554
|| ||||| || ||||| | || | ||||||||||| ||||||||||| || ||||||
Sbjct: 546 gatttcaatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctc 605
Query: 555 attttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcgga 614
||||||||| |||||||||| ||||||||||||| ||||| ||||| ||||| | |
Sbjct: 606 attttagatgttgaatcatcaaatggtgatatgtttactgaagaacagcatgagatggtg 665
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaa 674
||||||||||| |||||| | ||||| || || |||| || || ||||| || | ||||
Sbjct: 666 gaatcagctgctgagatgttatatggtcttattcatgttcgttatattctcactactaaa 725
Query: 675 ggactggctgcaatgctggagaagtataagaactatga 712
||| ||||||| ||| |||||||||||||||| |||||
Sbjct: 726 ggaatggctgctatgatggagaagtataagaattatga 763
>gb|AY060523.1| Arabidopsis thaliana At2g44680/F16B22.17 mRNA, complete cds
Length = 849
Score = 186 bits (94), Expect = 7e-045
Identities = 277/338 (81%)
Strand = Plus / Plus
Query: 375 gatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatgg 434
|||||||||| ||||||||| ||||| || || || || || ||||| ||||| ||||||
Sbjct: 238 gatagtgaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatgg 297
Query: 435 tattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagac 494
| ||| || || |||||||||||||| ||||||||||| ||||| || || || |||||
Sbjct: 298 ttttgtaatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagat 357
Query: 495 gacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctc 554
|| ||||| || ||||| | || | ||||||||||| ||||||||||| || ||||||
Sbjct: 358 gatttcaatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctc 417
Query: 555 attttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcgga 614
||||||||| |||||||||| ||||||||||||| ||||| ||||| ||||| | |
Sbjct: 418 attttagatgttgaatcatcaaatggtgatatgtttactgaagaacagcatgagatggtg 477
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaa 674
||||||||||| |||||| | ||||| || || |||| || || ||||| || | ||||
Sbjct: 478 gaatcagctgctgagatgttatatggtcttattcatgttcgttatattctcactactaaa 537
Query: 675 ggactggctgcaatgctggagaagtataagaactatga 712
||| ||||||| ||| |||||||||||||||| |||||
Sbjct: 538 ggaatggctgctatgatggagaagtataagaattatga 575
>gb|AY062585.1| Arabidopsis thaliana putative casein kinase II beta subunit
(At2g44680; F16B22.17) mRNA, complete cds
Length = 1300
Score = 186 bits (94), Expect = 7e-045
Identities = 277/338 (81%)
Strand = Plus / Plus
Query: 375 gatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatgg 434
|||||||||| ||||||||| ||||| || || || || || ||||| ||||| ||||||
Sbjct: 429 gatagtgaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatgg 488
Query: 435 tattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagac 494
| ||| || || |||||||||||||| ||||||||||| ||||| || || || |||||
Sbjct: 489 ttttgtaatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagat 548
Query: 495 gacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctc 554
|| ||||| || ||||| | || | ||||||||||| ||||||||||| || ||||||
Sbjct: 549 gatttcaatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctc 608
Query: 555 attttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcgga 614
||||||||| |||||||||| ||||||||||||| ||||| ||||| ||||| | |
Sbjct: 609 attttagatgttgaatcatcaaatggtgatatgtttactgaagaacagcatgagatggtg 668
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaa 674
||||||||||| |||||| | ||||| || || |||| || || ||||| || | ||||
Sbjct: 669 gaatcagctgctgagatgttatatggtcttattcatgttcgttatattctcactactaaa 728
Query: 675 ggactggctgcaatgctggagaagtataagaactatga 712
||| ||||||| ||| |||||||||||||||| |||||
Sbjct: 729 ggaatggctgctatgatggagaagtataagaattatga 766
>gb|AY093344.1| Arabidopsis thaliana putative casein kinase II beta subunit
(At2g44680) mRNA, complete cds
Length = 920
Score = 186 bits (94), Expect = 7e-045
Identities = 277/338 (81%)
Strand = Plus / Plus
Query: 375 gatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatgg 434
|||||||||| ||||||||| ||||| || || || || || ||||| ||||| ||||||
Sbjct: 238 gatagtgaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatgg 297
Query: 435 tattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagac 494
| ||| || || |||||||||||||| ||||||||||| ||||| || || || |||||
Sbjct: 298 ttttgtaatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagat 357
Query: 495 gacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctc 554
|| ||||| || ||||| | || | ||||||||||| ||||||||||| || ||||||
Sbjct: 358 gatttcaatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctc 417
Query: 555 attttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcgga 614
||||||||| |||||||||| ||||||||||||| ||||| ||||| ||||| | |
Sbjct: 418 attttagatgttgaatcatcaaatggtgatatgtttactgaagaacagcatgagatggtg 477
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaa 674
||||||||||| |||||| | ||||| || || |||| || || ||||| || | ||||
Sbjct: 478 gaatcagctgctgagatgttatatggtcttattcatgttcgttatattctcactactaaa 537
Query: 675 ggactggctgcaatgctggagaagtataagaactatga 712
||| ||||||| ||| |||||||||||||||| |||||
Sbjct: 538 ggaatggctgctatgatggagaagtataagaattatga 575
>emb|AX507695.1| Sequence 2390 from Patent WO0216655
Length = 852
Score = 186 bits (94), Expect = 7e-045
Identities = 277/338 (81%)
Strand = Plus / Plus
Query: 375 gatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatgg 434
|||||||||| ||||||||| ||||| || || || || || ||||| ||||| ||||||
Sbjct: 238 gatagtgaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatgg 297
Query: 435 tattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagac 494
| ||| || || |||||||||||||| ||||||||||| ||||| || || || |||||
Sbjct: 298 ttttgtaatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagat 357
Query: 495 gacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctc 554
|| ||||| || ||||| | || | ||||||||||| ||||||||||| || ||||||
Sbjct: 358 gatttcaatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctc 417
Query: 555 attttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcgga 614
||||||||| |||||||||| ||||||||||||| ||||| ||||| ||||| | |
Sbjct: 418 attttagatgttgaatcatcaaatggtgatatgtttactgaagaacagcatgagatggtg 477
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaa 674
||||||||||| |||||| | ||||| || || |||| || || ||||| || | ||||
Sbjct: 478 gaatcagctgctgagatgttatatggtcttattcatgttcgttatattctcactactaaa 537
Query: 675 ggactggctgcaatgctggagaagtataagaactatga 712
||| ||||||| ||| |||||||||||||||| |||||
Sbjct: 538 ggaatggctgctatgatggagaagtataagaattatga 575
Score = 63.9 bits (32), Expect = 7e-008
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 795 gtgaagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaaggc 854
||||||||||||||||| || || || || || |||||||| || || || |||||||||
Sbjct: 658 gtgaagatatactgcccaaaatgcgaggatatttactacccgcgatctaaataccaaggc 717
Query: 855 aacatcgacggcgcatactttgggacaacgttccctcatctgtt 898
||||| || || || |||||||| || || ||||||||| ||||
Sbjct: 718 aacattgatggagcttactttggaactactttccctcatttgtt 761
>gb|AY088075.1| Arabidopsis thaliana clone 40953 mRNA, complete sequence
Length = 1304
Score = 186 bits (94), Expect = 7e-045
Identities = 277/338 (81%)
Strand = Plus / Plus
Query: 375 gatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatgg 434
|||||||||| ||||||||| ||||| || || || || || ||||| ||||| ||||||
Sbjct: 429 gatagtgaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatgg 488
Query: 435 tattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagac 494
| ||| || || |||||||||||||| ||||||||||| ||||| || || || |||||
Sbjct: 489 ttttgtaatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagat 548
Query: 495 gacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctc 554
|| ||||| || ||||| | || | ||||||||||| ||||||||||| || ||||||
Sbjct: 549 gatttcaatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctc 608
Query: 555 attttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcgga 614
||||||||| |||||||||| ||||||||||||| ||||| ||||| ||||| | |
Sbjct: 609 attttagatgttgaatcatcaaatggtgatatgtttactgaagaacagcatgagatggtg 668
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaa 674
||||||||||| |||||| | ||||| || || |||| || || ||||| || | ||||
Sbjct: 669 gaatcagctgctgagatgttatatggtcttattcatgttcgttatattctcactactaaa 728
Query: 675 ggactggctgcaatgctggagaagtataagaactatga 712
||| ||||||| ||| |||||||||||||||| |||||
Sbjct: 729 ggaatggctgctatgatggagaagtataagaattatga 766
Score = 71.9 bits (36), Expect = 3e-010
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 795 gtgaagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaaggc 854
||||||||||||||||| || || || || || |||||||| ||||| || |||||||||
Sbjct: 849 gtgaagatatactgcccaaaatgcgaggatatttactacccgcggtctaaataccaaggc 908
Query: 855 aacatcgacggcgcatactttgggacaacgttccctcatctgtt 898
||||| || || || |||||||| || || ||||||||| ||||
Sbjct: 909 aacattgatggagcttactttggaactactttccctcatttgtt 952
>ref|NM_130032.2| Arabidopsis thaliana protein kinase CK2 regulator AT2G44680
transcript variant AT2G44680.1 mRNA, complete cds
Length = 1369
Score = 186 bits (94), Expect = 7e-045
Identities = 277/338 (81%)
Strand = Plus / Plus
Query: 375 gatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatgg 434
|||||||||| ||||||||| ||||| || || || || || ||||| ||||| ||||||
Sbjct: 429 gatagtgaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatgg 488
Query: 435 tattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagac 494
| ||| || || |||||||||||||| ||||||||||| ||||| || || || |||||
Sbjct: 489 ttttgtaatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagat 548
Query: 495 gacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctc 554
|| ||||| || ||||| | || | ||||||||||| ||||||||||| || ||||||
Sbjct: 549 gatttcaatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctc 608
Query: 555 attttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcgga 614
||||||||| |||||||||| ||||||||||||| ||||| ||||| ||||| | |
Sbjct: 609 attttagatgttgaatcatcaaatggtgatatgtttactgaagaacagcatgagatggtg 668
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaa 674
||||||||||| |||||| | ||||| || || |||| || || ||||| || | ||||
Sbjct: 669 gaatcagctgctgagatgttatatggtcttattcatgttcgttatattctcactactaaa 728
Query: 675 ggactggctgcaatgctggagaagtataagaactatga 712
||| ||||||| ||| |||||||||||||||| |||||
Sbjct: 729 ggaatggctgctatgatggagaagtataagaattatga 766
Score = 63.9 bits (32), Expect = 7e-008
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 795 gtgaagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaaggc 854
||||||||||||||||| || || || || || |||||||| || || || |||||||||
Sbjct: 849 gtgaagatatactgcccaaaatgcgaggatatttactacccgcgatctaaataccaaggc 908
Query: 855 aacatcgacggcgcatactttgggacaacgttccctcatctgtt 898
||||| || || || |||||||| || || ||||||||| ||||
Sbjct: 909 aacattgatggagcttactttggaactactttccctcatttgtt 952
>ref|NM_180090.1| Arabidopsis thaliana protein kinase CK2 regulator AT2G44680
transcript variant AT2G44680.2 mRNA, complete cds
Length = 1392
Score = 186 bits (94), Expect = 7e-045
Identities = 277/338 (81%)
Strand = Plus / Plus
Query: 375 gatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatgg 434
|||||||||| ||||||||| ||||| || || || || || ||||| ||||| ||||||
Sbjct: 429 gatagtgaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatgg 488
Query: 435 tattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagac 494
| ||| || || |||||||||||||| ||||||||||| ||||| || || || |||||
Sbjct: 489 ttttgtaatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagat 548
Query: 495 gacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctc 554
|| ||||| || ||||| | || | ||||||||||| ||||||||||| || ||||||
Sbjct: 549 gatttcaatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctc 608
Query: 555 attttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcgga 614
||||||||| |||||||||| ||||||||||||| ||||| ||||| ||||| | |
Sbjct: 609 attttagatgttgaatcatcaaatggtgatatgtttactgaagaacagcatgagatggtg 668
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaa 674
||||||||||| |||||| | ||||| || || |||| || || ||||| || | ||||
Sbjct: 669 gaatcagctgctgagatgttatatggtcttattcatgttcgttatattctcactactaaa 728
Query: 675 ggactggctgcaatgctggagaagtataagaactatga 712
||| ||||||| ||| |||||||||||||||| |||||
Sbjct: 729 ggaatggctgctatgatggagaagtataagaattatga 766
>gb|AF068318.1|AF068318 Arabidopsis thaliana regulatory subunit of protein kinase CK2
(CKB3) mRNA, complete cds
Length = 1080
Score = 161 bits (81), Expect = 4e-037
Identities = 441/561 (78%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||||||||||| || ||||| ||||| || || || || || || |||||||| || |
Sbjct: 359 ctgatagtgaagggtctgatgtgagtggatcggagggtgatgatacgtcgtggatctctt 418
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| ||| || || ||||||||||| |||||||||||||||||||| || || |||||||
Sbjct: 419 ggttttgtaatttgagagggaatgatttcttctgtgaagtcgatgaagattatattcaag 478
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || ||||| |||||||| | || | ||||| ||||| ||||||||||| || ||||
Sbjct: 479 atgatttcaatctttgtggtttaagtggtcaagtcccttactatgattatgcacttgatc 538
Query: 553 tcattttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcg 612
||||||||||| |||| | || | |||| ||||| ||||| ||||| |||| | |
Sbjct: 539 tcattttagatgttgatgcttccaacagtgagatgtttactgatgaacagcatgaaatgg 598
Query: 613 gagaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagta 672
||||||||||| |||||||| ||||| || || |||| || |||||| |||| | ||
Sbjct: 599 tggaatcagctgctgagatgctatatggtcttattcatgttcgttacattttgactacta 658
Query: 673 aaggactggctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtg 732
||||| ||||||||||| |||||||| ||||||| ||| || ||| | |||||| | |
Sbjct: 659 aaggaatggctgcaatgactgagaagtacaagaactgtgatttcgggagatgcccgagag 718
Query: 733 tttactgctgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagta 792
||| ||| || ||||| | || || |||||||||||||| || |||| |||| ||||
Sbjct: 719 ttttctgttgcggtcagtcttgtcttccagttggacaatccgatatcccgagatcgagta 778
Query: 793 ccgtgaagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaag 852
| ||||||||||||||||| || || || || || | ||||| || || || | |||||
Sbjct: 779 ctgtgaagatatactgccctaaatgcgaggatatatcttacccgcgatctaaattccaag 838
Query: 853 gcaacatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacatacg 912
|||| || || || || |||||||| || || |||||||| ||||| ||||||| ||||
Sbjct: 839 gcaatattgatggagcgtactttggaaccacattccctcacttgttcttgatgacttacg 898
Query: 913 agcacctcaagccacagaagc 933
| || | ||||| |||||||
Sbjct: 899 ggaacttaaagccgcagaagc 919
>emb|CQ803654.1| Sequence 65 from Patent WO2004035798
Length = 831
Score = 161 bits (81), Expect = 4e-037
Identities = 441/561 (78%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||||||||||| || ||||| ||||| || || || || || || |||||||| || |
Sbjct: 218 ctgatagtgaagggtctgatgtgagtggatcggagggtgatgatacgtcgtggatctctt 277
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| ||| || || ||||||||||| |||||||||||||||||||| || || |||||||
Sbjct: 278 ggttttgtaatttgagagggaatgatttcttctgtgaagtcgatgaagattatattcaag 337
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || ||||| |||||||| | || | ||||| ||||| ||||||||||| || ||||
Sbjct: 338 atgatttcaatctttgtggtttaagtggtcaagtcccttactatgattatgcacttgatc 397
Query: 553 tcattttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcg 612
||||||||||| |||| | || | |||| ||||| ||||| ||||| |||| | |
Sbjct: 398 tcattttagatgttgatgcttccaacagtgagatgtttactgatgaacagcatgaaatgg 457
Query: 613 gagaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagta 672
||||||||||| |||||||| ||||| || || |||| || |||||| |||| | ||
Sbjct: 458 tggaatcagctgctgagatgctatatggtcttattcatgttcgttacattttgactacta 517
Query: 673 aaggactggctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtg 732
||||| ||||||||||| |||||||| ||||||| ||| || ||| | |||||| | |
Sbjct: 518 aaggaatggctgcaatgactgagaagtacaagaactgtgatttcgggagatgcccgagag 577
Query: 733 tttactgctgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagta 792
||| ||| || ||||| | || || |||||||||||||| || |||| |||| ||||
Sbjct: 578 ttttctgttgcggtcagtcttgtcttccagttggacaatccgatatcccgagatcgagta 637
Query: 793 ccgtgaagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaag 852
| ||||||||||||||||| || || || || || | ||||| || || || | |||||
Sbjct: 638 ctgtgaagatatactgccctaaatgcgaggatatatcttacccgcgatctaaattccaag 697
Query: 853 gcaacatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacatacg 912
|||| || || || || |||||||| || || |||||||| ||||| ||||||| ||||
Sbjct: 698 gcaatattgatggagcgtactttggaaccacattccctcacttgttcttgatgacttacg 757
Query: 913 agcacctcaagccacagaagc 933
| || | ||||| |||||||
Sbjct: 758 ggaacttaaagccgcagaagc 778
>ref|NM_115889.3| Arabidopsis thaliana CKB3; protein kinase CK2 regulator AT3G60250
(CKB3) mRNA, complete cds
Length = 1354
Score = 161 bits (81), Expect = 4e-037
Identities = 441/561 (78%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||||||||||| || ||||| ||||| || || || || || || |||||||| || |
Sbjct: 369 ctgatagtgaagggtctgatgtgagtggatcggagggtgatgatacgtcgtggatctctt 428
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| ||| || || ||||||||||| |||||||||||||||||||| || || |||||||
Sbjct: 429 ggttttgtaatttgagagggaatgatttcttctgtgaagtcgatgaagattatattcaag 488
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || ||||| |||||||| | || | ||||| ||||| ||||||||||| || ||||
Sbjct: 489 atgatttcaatctttgtggtttaagtggtcaagtcccttactatgattatgcacttgatc 548
Query: 553 tcattttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcg 612
||||||||||| |||| | || | |||| ||||| ||||| ||||| |||| | |
Sbjct: 549 tcattttagatgttgatgcttccaacagtgagatgtttactgatgaacagcatgaaatgg 608
Query: 613 gagaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagta 672
||||||||||| |||||||| ||||| || || |||| || |||||| |||| | ||
Sbjct: 609 tggaatcagctgctgagatgctatatggtcttattcatgttcgttacattttgactacta 668
Query: 673 aaggactggctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtg 732
||||| ||||||||||| |||||||| ||||||| ||| || ||| | |||||| | |
Sbjct: 669 aaggaatggctgcaatgactgagaagtacaagaactgtgatttcgggagatgcccgagag 728
Query: 733 tttactgctgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagta 792
||| ||| || ||||| | || || |||||||||||||| || |||| |||| ||||
Sbjct: 729 ttttctgttgcggtcagtcttgtcttccagttggacaatccgatatcccgagatcgagta 788
Query: 793 ccgtgaagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaag 852
| ||||||||||||||||| || || || || || | ||||| || || || | |||||
Sbjct: 789 ctgtgaagatatactgccctaaatgcgaggatatatcttacccgcgatctaaattccaag 848
Query: 853 gcaacatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacatacg 912
|||| || || || || |||||||| || || |||||||| ||||| ||||||| ||||
Sbjct: 849 gcaatattgatggagcgtactttggaaccacattccctcacttgttcttgatgacttacg 908
Query: 913 agcacctcaagccacagaagc 933
| || | ||||| |||||||
Sbjct: 909 ggaacttaaagccgcagaagc 929
>gb|AV824835.1|AV824835 AV824835 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-77-N13 5',
mRNA sequence
Length = 652
Score = 141 bits (71), Expect = 4e-031
Identities = 183/221 (82%)
Strand = Plus / Plus
Query: 375 gatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatgg 434
|||||||||| ||||||||| ||||| || || || || || ||||| ||||| ||||||
Sbjct: 428 gatagtgaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatgg 487
Query: 435 tattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagac 494
| ||| || || |||||||||||||| ||||||||||| ||||| || || || |||||
Sbjct: 488 ttttgtaatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagat 547
Query: 495 gacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctc 554
|| ||||| || ||||| | || | ||||||||||| ||||||||||| || ||||||
Sbjct: 548 gatttcaatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctc 607
Query: 555 attttagatattgaatcatctcatggtgatatgttcactga 595
||||||||| |||||||||| |||| |||||||| |||||
Sbjct: 608 attttagatgttgaatcatcaaatggngatatgttnactga 648
>gb|AV551311.1|AV551311 AV551311 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ125a09R 5', mRNA sequence
Length = 431
Score = 135 bits (68), Expect = 2e-029
Identities = 317/400 (79%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||||||||||| || ||||| ||||| || || || || || || |||||||| || |
Sbjct: 13 ctgatagtgaagggtctgatgtgagtggatcggagggtgatgatacgtcgtggatctctt 72
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| ||| || || ||||||||||| |||||||||||||||||||| || || |||||||
Sbjct: 73 ggttttgtaatttgagagggaatgatttcttctgtgaagtcgatgaagattatattcaag 132
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || ||||| |||||||| | || | ||||| ||||| ||||||||||| || ||||
Sbjct: 133 atgatttcaatctttgtggtttaagtggtcaagtcccttactatgattatgcacttgatc 192
Query: 553 tcattttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcg 612
||||||||||| |||| | || | |||| ||||| ||||| ||||| |||| | |
Sbjct: 193 tcattttagatgttgatgcttccaacagtgagatgtttactgatgaacagcatgaaatgg 252
Query: 613 gagaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagta 672
||||||||||| |||||||| ||||| || || |||| || |||||| |||| | ||
Sbjct: 253 tggaatcagctgctgagatgctatatggtcttattcatgttcgttacattttgactacta 312
Query: 673 aaggactggctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtg 732
||||| ||||||||||| |||||||| ||||||| ||| || ||| | |||||| | |
Sbjct: 313 aaggaatggctgcaatgactgagaagtacaagaactgtgatttcgggagatgcccgagag 372
Query: 733 tttactgctgtggtcaaccatgcctgccagttggacaatc 772
||| ||| || ||||| | || || ||||||||||||||
Sbjct: 373 ttttctgttgcggtcagtcttgtcttccagttggacaatc 412
>dbj|AB025609.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K14A3
Length = 34498
Score = 133 bits (67), Expect = 9e-029
Identities = 169/203 (83%)
Strand = Plus / Minus
Query: 375 gatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatgg 434
|||||||||| ||||||||| ||||| ||||||||||| ||||| || ||||| || |||
Sbjct: 8814 gatagtgaagaatcagatgtgagtggttctgatggagaggacacttcatggatatcttgg 8755
Query: 435 tattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagac 494
| ||| || ||||||| || |||||||| |||||||| |||||||| |||||||||||
Sbjct: 8754 ttttgtaatctaagaggaaacgagttcttttgtgaagttgatgatgattacattcaagat 8695
Query: 495 gacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctc 554
||||||||| | ||||| |||||||| | |||||| || || || || ||||| ||| |
Sbjct: 8694 gacttcaacttgtgtggactcagcagtctagttccctactacgagtacgctcttgatttg 8635
Query: 555 attttagatattgaatcatctca 577
||||| ||| ||||||| |||||
Sbjct: 8634 attttggatgttgaatcttctca 8612
Score = 71.9 bits (36), Expect = 3e-010
Identities = 102/124 (82%)
Strand = Plus / Minus
Query: 732 gtttactgctgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagt 791
||||| |||||||| ||||| || || || ||||| ||||||||| | | ||||||||
Sbjct: 8232 gtttattgctgtggccaaccttgtcttccggttggtcaatcagacttaccgcgatctagc 8173
Query: 792 accgtgaagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaa 851
|| ||||||||||| ||||| || || |||||||| || |||||||| || ||||| |||
Sbjct: 8172 actgtgaagatatattgcccgaaatgcgaagacatttattacccacgatcaaagtatcaa 8113
Query: 852 ggca 855
||||
Sbjct: 8112 ggca 8109
Score = 65.9 bits (33), Expect = 2e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 870 tactttgggacaacgttccctcatctgttcctgatgacatacgagcacctcaagcca 926
||||||||||||||||| || ||||||||||||||||| || | ||| |||||||||
Sbjct: 7925 tactttgggacaacgtttccacatctgttcctgatgacttatgggcatctcaagcca 7869
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 133 bits (67), Expect = 9e-029
Identities = 169/203 (83%)
Strand = Plus / Minus
Query: 375 gatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatgg 434
|||||||||| ||||||||| ||||| ||||||||||| ||||| || ||||| || |||
Sbjct: 19143201 gatagtgaagaatcagatgtgagtggttctgatggagaggacacttcatggatatcttgg 19143142
Query: 435 tattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagac 494
| ||| || ||||||| || |||||||| |||||||| |||||||| |||||||||||
Sbjct: 19143141 ttttgtaatctaagaggaaacgagttcttttgtgaagttgatgatgattacattcaagat 19143082
Query: 495 gacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctc 554
||||||||| | ||||| |||||||| | |||||| || || || || ||||| ||| |
Sbjct: 19143081 gacttcaacttgtgtggactcagcagtctagttccctactacgagtacgctcttgatttg 19143022
Query: 555 attttagatattgaatcatctca 577
||||| ||| ||||||| |||||
Sbjct: 19143021 attttggatgttgaatcttctca 19142999
Score = 71.9 bits (36), Expect = 3e-010
Identities = 102/124 (82%)
Strand = Plus / Minus
Query: 732 gtttactgctgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagt 791
||||| |||||||| ||||| || || || ||||| ||||||||| | | ||||||||
Sbjct: 19142619 gtttattgctgtggccaaccttgtcttccggttggtcaatcagacttaccgcgatctagc 19142560
Query: 792 accgtgaagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaa 851
|| ||||||||||| ||||| || || |||||||| || |||||||| || ||||| |||
Sbjct: 19142559 actgtgaagatatattgcccgaaatgcgaagacatttattacccacgatcaaagtatcaa 19142500
Query: 852 ggca 855
||||
Sbjct: 19142499 ggca 19142496
Score = 65.9 bits (33), Expect = 2e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 870 tactttgggacaacgttccctcatctgttcctgatgacatacgagcacctcaagcca 926
||||||||||||||||| || ||||||||||||||||| || | ||| |||||||||
Sbjct: 19142312 tactttgggacaacgtttccacatctgttcctgatgacttatgggcatctcaagcca 19142256
>gb|AU237720.1|AU237720 AU237720 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-51-O05 5',
mRNA sequence
Length = 671
Score = 127 bits (64), Expect = 6e-027
Identities = 268/336 (79%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||||||||||| || ||||| ||||| || || || || || || |||||||| || |
Sbjct: 298 ctgatagtgaagggtctgatgtgagtggatcggagggtgatgatacgtcgtggatctctt 357
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| ||| || || ||||||||||| |||||||||||||||||||| || || |||||||
Sbjct: 358 ggttttgtaatttgagagggaatgatttcttctgtgaagtcgatgaagattatattcaag 417
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || ||||| |||||||| | || | ||||| ||||| ||||||||||| || ||||
Sbjct: 418 atgatttcaatctttgtggtttaagtggtcaagtcccttactatgattatgcacttgatc 477
Query: 553 tcattttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcg 612
||||||||||| |||| | || | |||| ||||| ||||| ||||| |||| | |
Sbjct: 478 tcattttagatgttgatgcttccaacagtgagatgtttactgatgaacagcatgaaatgg 537
Query: 613 gagaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagta 672
||||||||||| |||||||| ||||| || || |||| || |||||| |||| | ||
Sbjct: 538 tggaatcagctgctgagatgctatatggtcttattcatgttcgttacattttgactacta 597
Query: 673 aaggactggctgcaatgctggagaagtataagaact 708
||||| ||||||||||| |||||||| |||||||
Sbjct: 598 aaggaatggctgcaatgactgagaagtacaagaact 633
>gb|AC003672.3| Arabidopsis thaliana chromosome 2 clone F16B22 map m336, complete
sequence
Length = 109375
Score = 127 bits (64), Expect = 6e-027
Identities = 166/200 (83%)
Strand = Plus / Minus
Query: 375 gatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatgg 434
|||||||||| ||||||||| ||||| || || || || || ||||| ||||| ||||||
Sbjct: 48344 gatagtgaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatgg 48285
Query: 435 tattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagac 494
| ||| || || |||||||||||||| ||||||||||| ||||| || || || |||||
Sbjct: 48284 ttttgtaatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagat 48225
Query: 495 gacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctc 554
|| ||||| || ||||| | || | ||||||||||| ||||||||||| || ||||||
Sbjct: 48224 gatttcaatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctc 48165
Query: 555 attttagatattgaatcatc 574
||||||||| ||||||||||
Sbjct: 48164 attttagatgttgaatcatc 48145
Score = 42.1 bits (21), Expect = 0.25
Identities = 51/61 (83%)
Strand = Plus / Minus
Query: 795 gtgaagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaaggc 854
||||||||||||||||| || || || || || |||||||| || || || |||||||||
Sbjct: 47769 gtgaagatatactgcccaaaatgcgaggatatttactacccgcgatctaaataccaaggc 47710
Query: 855 a 855
|
Sbjct: 47709 a 47709
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 127 bits (64), Expect = 6e-027
Identities = 166/200 (83%)
Strand = Plus / Minus
Query: 375 gatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatgg 434
|||||||||| ||||||||| ||||| || || || || || ||||| ||||| ||||||
Sbjct: 18434910 gatagtgaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatgg 18434851
Query: 435 tattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagac 494
| ||| || || |||||||||||||| ||||||||||| ||||| || || || |||||
Sbjct: 18434850 ttttgtaatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagat 18434791
Query: 495 gacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctc 554
|| ||||| || ||||| | || | ||||||||||| ||||||||||| || ||||||
Sbjct: 18434790 gatttcaatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctc 18434731
Query: 555 attttagatattgaatcatc 574
||||||||| ||||||||||
Sbjct: 18434730 attttagatgttgaatcatc 18434711
Score = 73.8 bits (37), Expect = 7e-011
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 522 caagttccttattatgattatgctctcgatctcattttagatattgaatcatc 574
||||||||||| ||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 18228698 caagttccttactatgattatgcacttgatctcattttagatgttgaatcatc 18228750
Score = 42.1 bits (21), Expect = 0.25
Identities = 51/61 (83%)
Strand = Plus / Minus
Query: 795 gtgaagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaaggc 854
||||||||||||||||| || || || || || |||||||| || || || |||||||||
Sbjct: 18434335 gtgaagatatactgcccaaaatgcgaggatatttactacccgcgatctaaataccaaggc 18434276
Query: 855 a 855
|
Sbjct: 18434275 a 18434275
>emb|BX832248.1|CNS0A285 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH60ZH08 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1837
Score = 113 bits (57), Expect = 8e-023
Identities = 111/129 (86%)
Strand = Plus / Plus
Query: 375 gatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatgg 434
|||||||||| ||||||||| ||||| ||||||||||| ||||| || ||||| || |||
Sbjct: 575 gatagtgaagaatcagatgtgagtggttctgatggagaggacacttcatggatatcttgg 634
Query: 435 tattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagac 494
| ||| || ||||||| || |||||||| |||||||| |||||||| |||||||||||
Sbjct: 635 ttttgtaatctaagaggaaacgagttcttttgtgaagttgatgatgattacattcaagat 694
Query: 495 gacttcaac 503
|||||||||
Sbjct: 695 gacttcaac 703
Score = 65.9 bits (33), Expect = 2e-008
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 870 tactttgggacaacgttccctcatctgttcctgatgacatacgagcacctcaagcca 926
||||||||||||||||| || ||||||||||||||||| || | ||| |||||||||
Sbjct: 1383 tactttgggacaacgtttccacatctgttcctgatgacttatgggcatctcaagcca 1439
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 111 bits (56), Expect = 3e-022
Identities = 161/196 (82%)
Strand = Plus / Minus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||||||||||| || ||||| ||||| || || || || || || |||||||| || |
Sbjct: 22229933 ctgatagtgaagggtctgatgtgagtggatcggagggtgatgatacgtcgtggatctctt 22229874
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| ||| || || ||||||||||| |||||||||||||||||||| || || |||||||
Sbjct: 22229873 ggttttgtaatttgagagggaatgatttcttctgtgaagtcgatgaagattatattcaag 22229814
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || ||||| |||||||| | || | ||||| ||||| ||||||||||| || ||||
Sbjct: 22229813 atgatttcaatctttgtggtttaagtggtcaagtcccttactatgattatgcacttgatc 22229754
Query: 553 tcattttagatattga 568
||||||||||| ||||
Sbjct: 22229753 tcattttagatgttga 22229738
Score = 54.0 bits (27), Expect = 7e-005
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaa 674
||||||||||| |||||||| ||||| || || |||| || |||||| |||| | ||||
Sbjct: 22229603 gaatcagctgctgagatgctatatggtcttattcatgttcgttacattttgactactaaa 22229544
Query: 675 ggactggctgcaatg 689
||| |||||||||||
Sbjct: 22229543 ggaatggctgcaatg 22229529
Score = 54.0 bits (27), Expect = 7e-005
Identities = 96/119 (80%)
Strand = Plus / Minus
Query: 693 gagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaacca 752
|||||||| ||||||| ||| || ||| | |||||| | |||| ||| || ||||| |
Sbjct: 22229429 gagaagtacaagaactgtgatttcgggagatgcccgagagttttctgttgcggtcagtct 22229370
Query: 753 tgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgccc 811
|| || |||||||||||||| || |||| |||| ||||| |||||||||||||||||
Sbjct: 22229369 tgtcttccagttggacaatccgatatcccgagatcgagtactgtgaagatatactgccc 22229311
>emb|AL163852.1|ATF27H5 Arabidopsis thaliana DNA chromosome 3, BAC clone F27H5
Length = 88548
Score = 111 bits (56), Expect = 3e-022
Identities = 161/196 (82%)
Strand = Plus / Minus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||||||||||| || ||||| ||||| || || || || || || |||||||| || |
Sbjct: 46659 ctgatagtgaagggtctgatgtgagtggatcggagggtgatgatacgtcgtggatctctt 46600
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| ||| || || ||||||||||| |||||||||||||||||||| || || |||||||
Sbjct: 46599 ggttttgtaatttgagagggaatgatttcttctgtgaagtcgatgaagattatattcaag 46540
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || ||||| |||||||| | || | ||||| ||||| ||||||||||| || ||||
Sbjct: 46539 atgatttcaatctttgtggtttaagtggtcaagtcccttactatgattatgcacttgatc 46480
Query: 553 tcattttagatattga 568
||||||||||| ||||
Sbjct: 46479 tcattttagatgttga 46464
Score = 54.0 bits (27), Expect = 7e-005
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaa 674
||||||||||| |||||||| ||||| || || |||| || |||||| |||| | ||||
Sbjct: 46329 gaatcagctgctgagatgctatatggtcttattcatgttcgttacattttgactactaaa 46270
Query: 675 ggactggctgcaatg 689
||| |||||||||||
Sbjct: 46269 ggaatggctgcaatg 46255
Score = 54.0 bits (27), Expect = 7e-005
Identities = 96/119 (80%)
Strand = Plus / Minus
Query: 693 gagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaacca 752
|||||||| ||||||| ||| || ||| | |||||| | |||| ||| || ||||| |
Sbjct: 46155 gagaagtacaagaactgtgatttcgggagatgcccgagagttttctgttgcggtcagtct 46096
Query: 753 tgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgccc 811
|| || |||||||||||||| || |||| |||| ||||| |||||||||||||||||
Sbjct: 46095 tgtcttccagttggacaatccgatatcccgagatcgagtactgtgaagatatactgccc 46037
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 111 bits (56), Expect = 3e-022
Identities = 161/196 (82%)
Strand = Plus / Minus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||||||||||| || ||||| ||||| || || || || || || |||||||| || |
Sbjct: 22282634 ctgatagtgaagggtctgatgtgagtggatcggagggtgatgatacgtcgtggatctctt 22282575
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| ||| || || ||||||||||| |||||||||||||||||||| || || |||||||
Sbjct: 22282574 ggttttgtaatttgagagggaatgatttcttctgtgaagtcgatgaagattatattcaag 22282515
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || ||||| |||||||| | || | ||||| ||||| ||||||||||| || ||||
Sbjct: 22282514 atgatttcaatctttgtggtttaagtggtcaagtcccttactatgattatgcacttgatc 22282455
Query: 553 tcattttagatattga 568
||||||||||| ||||
Sbjct: 22282454 tcattttagatgttga 22282439
Score = 54.0 bits (27), Expect = 7e-005
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaa 674
||||||||||| |||||||| ||||| || || |||| || |||||| |||| | ||||
Sbjct: 22282304 gaatcagctgctgagatgctatatggtcttattcatgttcgttacattttgactactaaa 22282245
Query: 675 ggactggctgcaatg 689
||| |||||||||||
Sbjct: 22282244 ggaatggctgcaatg 22282230
Score = 54.0 bits (27), Expect = 7e-005
Identities = 96/119 (80%)
Strand = Plus / Minus
Query: 693 gagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaacca 752
|||||||| ||||||| ||| || ||| | |||||| | |||| ||| || ||||| |
Sbjct: 22282130 gagaagtacaagaactgtgatttcgggagatgcccgagagttttctgttgcggtcagtct 22282071
Query: 753 tgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgccc 811
|| || |||||||||||||| || |||| |||| ||||| |||||||||||||||||
Sbjct: 22282070 tgtcttccagttggacaatccgatatcccgagatcgagtactgtgaagatatactgccc 22282012
>gb|CB259616.1|CB259616 35-E9536-013-002-F09-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770F092Q 5-PRIME, mRNA sequence
Length = 592
Score = 109 bits (55), Expect = 1e-021
Identities = 184/227 (81%)
Strand = Plus / Plus
Query: 381 gaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatggtattgc 440
|||| |||||| || ||||| ||||||||||| |||||||||||||| || |||| |||
Sbjct: 358 gaagaatcagaggtcagtggttctgatggagaggacacctcgtggatatcttggttctgc 417
Query: 441 aacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttc 500
||| | | ||||| ||||||||||||||||| |||||||| ||||| || || |||||
Sbjct: 418 aaccttcgtgggaacgagttcttctgtgaagttgatgatgattacatccaggatgacttt 477
Query: 501 aacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctcatttta 560
||| | ||||| |||||| ||||||||||| || || ||||| || ||| | |||||
Sbjct: 478 aacttgtgtggactcagccatcaagttccttactacgactatgcccttgatttgattttg 537
Query: 561 gatattgaatcatctcatggtgatatgttcactgaggaacaaaatga 607
||| | || || || |||||||| ||||| || |||||||| |||||
Sbjct: 538 gatgtggagtcttcgcatggtgagatgtttacagaggaacagaatga 584
>gb|AI993201.1|AI993201 701495685 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701495685, mRNA sequence
Length = 499
Score = 107 bits (54), Expect = 5e-021
Identities = 156/190 (82%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||||||||||| || ||||| ||||| || || || || || || |||||||| || |
Sbjct: 251 ctgatagtgaagggtctgatgtgagtggatcggagggtgatgatacgtcgtggatctctt 310
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| ||| || || ||||||||||| |||||||||||||||||||| || || |||||||
Sbjct: 311 ggttttgtaatttgagagggaatgatttcttctgtgaagtcgatgaagattatattcaag 370
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || ||||| |||||||| | || | ||||| ||||| ||||||||||| || ||||
Sbjct: 371 atgatttcaatctttgtggtttaagtggtcaagtcccttactatgattatgccctggatc 430
Query: 553 tcattttaga 562
||||||||||
Sbjct: 431 tcattttaga 440
>gb|AV825757.1|AV825757 AV825757 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-14-E09 5',
mRNA sequence
Length = 614
Score = 107 bits (54), Expect = 5e-021
Identities = 131/156 (83%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 375 gatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatgg 434
|||||||||| ||||||||| ||||| ||||||||||| ||||| || ||||| || |||
Sbjct: 405 gatagtgaagaatcagatgtgagtggttctgatggagaggacacttcatggatatcttgg 464
Query: 435 tattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaa-ga 493
| ||| || ||||||| || |||||||| |||||||| |||||||| ||||||||| ||
Sbjct: 465 ttttgtaatctaagaggaaacgagttcttttgtgaagttgatgatgattacattcaagga 524
Query: 494 cgacttcaacctttgtggcctcagcagccaagttcc 529
||||||||| | |||| |||||||| | ||||||
Sbjct: 525 tgacttcaacttgngtggactcagcagnctagttcc 560
>gb|AI993910.1|AI993910 701493356 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701493356, mRNA sequence
Length = 437
Score = 105 bits (53), Expect = 2e-020
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 792 accgtgaagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaa 851
||||| |||||||||||||| || |||||||| |||| |||||||| || || ||||||
Sbjct: 410 accgtaaagatatactgcccaaaatgtgaagatgtctattacccacgatcaaaataccaa 351
Query: 852 ggcaacatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacatac 911
|| ||||| || || || ||||||||||||||||| || ||||||||| ||||||| |||
Sbjct: 350 ggaaacatagatggagcttactttgggacaacgtttccacatctgttcttgatgacgtac 291
Query: 912 gagcacctcaagccaca 928
| ||| || ||||||||
Sbjct: 290 gggcatctgaagccaca 274
>gb|AF263518.1|AF263518 Arabidopsis thaliana protein synthesis initiation factor 4G (EIF4G)
gene, complete cds
Length = 10989
Score = 105 bits (53), Expect = 2e-020
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 420 tcgtggatttcatggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgat 479
|||||||| || |||| ||| || || ||||||||||| ||||||||||||||||||||
Sbjct: 9503 tcgtggatctcttggttttgtaatttgagagggaatgatttcttctgtgaagtcgatgaa 9444
Query: 480 gactacattcaagacgacttcaacctttgtggcctcagcagccaagttccttattatgat 539
|| || |||||||| || ||||| |||||||| | || | ||||| ||||| ||||||
Sbjct: 9443 gattatattcaagatgatttcaatctttgtggtttaagtggtcaagtcccttactatgat 9384
Query: 540 tatgctctcgatctcattttagatattga 568
||||| || ||||||||||||||| ||||
Sbjct: 9383 tatgcacttgatctcattttagatgttga 9355
Score = 54.0 bits (27), Expect = 7e-005
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaa 674
||||||||||| |||||||| ||||| || || |||| || |||||| |||| | ||||
Sbjct: 9220 gaatcagctgctgagatgctatatggtcttattcatgttcgttacattttgactactaaa 9161
Query: 675 ggactggctgcaatg 689
||| |||||||||||
Sbjct: 9160 ggaatggctgcaatg 9146
Score = 54.0 bits (27), Expect = 7e-005
Identities = 96/119 (80%)
Strand = Plus / Minus
Query: 693 gagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaacca 752
|||||||| ||||||| ||| || ||| | |||||| | |||| ||| || ||||| |
Sbjct: 9046 gagaagtacaagaactgtgatttcgggagatgcccgagagttttctgttgcggtcagtct 8987
Query: 753 tgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgccc 811
|| || |||||||||||||| || |||| |||| ||||| |||||||||||||||||
Sbjct: 8986 tgtcttccagttggacaatccgatatcccgagatcgagtactgtgaagatatactgccc 8928
>gb|T42848.1|T42848 6111 Lambda-PRL2 Arabidopsis thaliana cDNA clone 118A10T7, mRNA
sequence
Length = 544
Score = 99.6 bits (50), Expect = 1e-018
Identities = 159/196 (81%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||||||||||| || ||||| ||||| || || || || || || |||||||| || |
Sbjct: 52 ctgatagtgaagggtctgatgtgagtggatcggagggtgatgatacgtcgtggatctctt 111
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| ||| || || ||||||||||| |||||||||||||||||||| || || |||||||
Sbjct: 112 ggttttgtaatttgagagggaatgatttcttctgtgaagtcgatgaagattatattcaag 171
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || ||||| |||||||| | || | ||||| ||||| ||||||||| | || || |
Sbjct: 172 atgatttcaatctttgtggtttaagtggtcaagtcccttactatgattatncacttganc 231
Query: 553 tcattttagatattga 568
||||||||||| ||||
Sbjct: 232 tcattttagatgttga 247
>gb|T42705.1|T42705 5968 Lambda-PRL2 Arabidopsis thaliana cDNA clone 116C22T7, mRNA
sequence
Length = 412
Score = 95.6 bits (48), Expect = 2e-017
Identities = 158/196 (80%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||||||||||| || ||||| ||||| || || || || || || |||||||| | |
Sbjct: 52 ctgatagtgaagggtctgatgtgagtggntcggagggtgatgatacgtcgtggatctntt 111
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| ||| || || ||||||||||| |||||||||||||||||||| || || |||||||
Sbjct: 112 ggttttgtaatttgagagggaatgatttcttctgtgaagtcgatgaagattatattcaag 171
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || ||||| |||||||| | || | ||||| ||||| ||||||||| | || || |
Sbjct: 172 atgatttcaatctttgtggtttaagtggtcaagtcccttactatgattatncacttganc 231
Query: 553 tcattttagatattga 568
||||||||||| ||||
Sbjct: 232 tcattttagatgttga 247
>gb|AV792274.1|AV792274 AV792274 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-14-E09 3',
mRNA sequence
Length = 422
Score = 95.6 bits (48), Expect = 2e-017
Identities = 93/108 (86%)
Strand = Plus / Minus
Query: 819 gaagacatctactacccacggtccaagtaccaaggcaacatcgacggcgcatactttggg 878
|||||||| || |||||||| || ||||| ||||||||||| || || || |||||||||
Sbjct: 408 gaagacatttattacccacgatcaaagtatcaaggcaacattgatggagcttactttggg 349
Query: 879 acaacgttccctcatctgttcctgatgacatacgagcacctcaagcca 926
|||||||| || ||||||||||||||||| || | ||| |||||||||
Sbjct: 348 acaacgtttccacatctgttcctgatgacttatgggcatctcaagcca 301
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 95.6 bits (48), Expect = 2e-017
Identities = 126/152 (82%)
Strand = Plus / Plus
Query: 381 gaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatggtattgc 440
|||| |||||| || ||||| ||||||||||| |||||||||||||| || |||| |||
Sbjct: 5738774 gaagaatcagaggtcagtggttctgatggagaggacacctcgtggatatcttggttctgc 5738833
Query: 441 aacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttc 500
||| | | ||||| ||||||||||||||||| |||||||| ||||| || || |||||
Sbjct: 5738834 aaccttcgtgggaacgagttcttctgtgaagttgatgatgattacatccaggatgacttt 5738893
Query: 501 aacctttgtggcctcagcagccaagttcctta 532
||| | ||||| |||||| |||||||||||
Sbjct: 5738894 aacttgtgtggactcagccatcaagttcctta 5738925
Score = 61.9 bits (31), Expect = 3e-007
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 870 tactttgggacaacgttccctcatctgttcctgatgacatacgagcacctcaagccaca 928
||||||||||||||||| || ||||||||| ||||||| |||| ||| || ||||||||
Sbjct: 5739628 tactttgggacaacgtttccacatctgttcttgatgacgtacgggcatctgaagccaca 5739686
Score = 58.0 bits (29), Expect = 4e-006
Identities = 119/149 (79%)
Strand = Plus / Plus
Query: 705 aactatgactttgggcggtgcccgcgtgtttactgctgtggtcaaccatgcctgccagtt 764
|||||||||||||| | ||||| | ||||| || ||||| ||||| || | ||||||
Sbjct: 5739314 aactatgactttggaagatgcccaagagtttattgttgtggccaaccttgtttaccagtt 5739373
Query: 765 ggacaatcagacatccatcgatctagtaccgtgaagatatactgccccaagtgtgaagac 824
|| ||||| || |||| | || | || ||||| |||||||||||||| || ||||||||
Sbjct: 5739374 ggtcaatccgatatccctagagcaagcaccgtaaagatatactgcccaaaatgtgaagat 5739433
Query: 825 atctactacccacggtccaagtaccaagg 853
|||| |||||||| || || ||||||||
Sbjct: 5739434 gtctattacccacgatcaaaataccaagg 5739462
>emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 46
Length = 198788
Score = 95.6 bits (48), Expect = 2e-017
Identities = 126/152 (82%)
Strand = Plus / Plus
Query: 381 gaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatggtattgc 440
|||| |||||| || ||||| ||||||||||| |||||||||||||| || |||| |||
Sbjct: 180155 gaagaatcagaggtcagtggttctgatggagaggacacctcgtggatatcttggttctgc 180214
Query: 441 aacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttc 500
||| | | ||||| ||||||||||||||||| |||||||| ||||| || || |||||
Sbjct: 180215 aaccttcgtgggaacgagttcttctgtgaagttgatgatgattacatccaggatgacttt 180274
Query: 501 aacctttgtggcctcagcagccaagttcctta 532
||| | ||||| |||||| |||||||||||
Sbjct: 180275 aacttgtgtggactcagccatcaagttcctta 180306
Score = 61.9 bits (31), Expect = 3e-007
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 870 tactttgggacaacgttccctcatctgttcctgatgacatacgagcacctcaagccaca 928
||||||||||||||||| || ||||||||| ||||||| |||| ||| || ||||||||
Sbjct: 181009 tactttgggacaacgtttccacatctgttcttgatgacgtacgggcatctgaagccaca 181067
Score = 58.0 bits (29), Expect = 4e-006
Identities = 119/149 (79%)
Strand = Plus / Plus
Query: 705 aactatgactttgggcggtgcccgcgtgtttactgctgtggtcaaccatgcctgccagtt 764
|||||||||||||| | ||||| | ||||| || ||||| ||||| || | ||||||
Sbjct: 180695 aactatgactttggaagatgcccaagagtttattgttgtggccaaccttgtttaccagtt 180754
Query: 765 ggacaatcagacatccatcgatctagtaccgtgaagatatactgccccaagtgtgaagac 824
|| ||||| || |||| | || | || ||||| |||||||||||||| || ||||||||
Sbjct: 180755 ggtcaatccgatatccctagagcaagcaccgtaaagatatactgcccaaaatgtgaagat 180814
Query: 825 atctactacccacggtccaagtaccaagg 853
|||| |||||||| || || ||||||||
Sbjct: 180815 gtctattacccacgatcaaaataccaagg 180843
>emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 8
Length = 207674
Score = 95.6 bits (48), Expect = 2e-017
Identities = 126/152 (82%)
Strand = Plus / Plus
Query: 381 gaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatggtattgc 440
|||| |||||| || ||||| ||||||||||| |||||||||||||| || |||| |||
Sbjct: 190790 gaagaatcagaggtcagtggttctgatggagaggacacctcgtggatatcttggttctgc 190849
Query: 441 aacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttc 500
||| | | ||||| ||||||||||||||||| |||||||| ||||| || || |||||
Sbjct: 190850 aaccttcgtgggaacgagttcttctgtgaagttgatgatgattacatccaggatgacttt 190909
Query: 501 aacctttgtggcctcagcagccaagttcctta 532
||| | ||||| |||||| |||||||||||
Sbjct: 190910 aacttgtgtggactcagccatcaagttcctta 190941
Score = 61.9 bits (31), Expect = 3e-007
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 870 tactttgggacaacgttccctcatctgttcctgatgacatacgagcacctcaagccaca 928
||||||||||||||||| || ||||||||| ||||||| |||| ||| || ||||||||
Sbjct: 191644 tactttgggacaacgtttccacatctgttcttgatgacgtacgggcatctgaagccaca 191702
Score = 58.0 bits (29), Expect = 4e-006
Identities = 119/149 (79%)
Strand = Plus / Plus
Query: 705 aactatgactttgggcggtgcccgcgtgtttactgctgtggtcaaccatgcctgccagtt 764
|||||||||||||| | ||||| | ||||| || ||||| ||||| || | ||||||
Sbjct: 191330 aactatgactttggaagatgcccaagagtttattgttgtggccaaccttgtttaccagtt 191389
Query: 765 ggacaatcagacatccatcgatctagtaccgtgaagatatactgccccaagtgtgaagac 824
|| ||||| || |||| | || | || ||||| |||||||||||||| || ||||||||
Sbjct: 191390 ggtcaatccgatatccctagagcaagcaccgtaaagatatactgcccaaaatgtgaagat 191449
Query: 825 atctactacccacggtccaagtaccaagg 853
|||| |||||||| || || ||||||||
Sbjct: 191450 gtctattacccacgatcaaaataccaagg 191478
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 95.6 bits (48), Expect = 2e-017
Identities = 126/152 (82%)
Strand = Plus / Plus
Query: 381 gaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatggtattgc 440
|||| |||||| || ||||| ||||||||||| |||||||||||||| || |||| |||
Sbjct: 9826031 gaagaatcagaggtcagtggttctgatggagaggacacctcgtggatatcttggttctgc 9826090
Query: 441 aacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttc 500
||| | | ||||| ||||||||||||||||| |||||||| ||||| || || |||||
Sbjct: 9826091 aaccttcgtgggaacgagttcttctgtgaagttgatgatgattacatccaggatgacttt 9826150
Query: 501 aacctttgtggcctcagcagccaagttcctta 532
||| | ||||| |||||| |||||||||||
Sbjct: 9826151 aacttgtgtggactcagccatcaagttcctta 9826182
Score = 61.9 bits (31), Expect = 3e-007
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 870 tactttgggacaacgttccctcatctgttcctgatgacatacgagcacctcaagccaca 928
||||||||||||||||| || ||||||||| ||||||| |||| ||| || ||||||||
Sbjct: 9826885 tactttgggacaacgtttccacatctgttcttgatgacgtacgggcatctgaagccaca 9826943
Score = 58.0 bits (29), Expect = 4e-006
Identities = 119/149 (79%)
Strand = Plus / Plus
Query: 705 aactatgactttgggcggtgcccgcgtgtttactgctgtggtcaaccatgcctgccagtt 764
|||||||||||||| | ||||| | ||||| || ||||| ||||| || | ||||||
Sbjct: 9826571 aactatgactttggaagatgcccaagagtttattgttgtggccaaccttgtttaccagtt 9826630
Query: 765 ggacaatcagacatccatcgatctagtaccgtgaagatatactgccccaagtgtgaagac 824
|| ||||| || |||| | || | || ||||| |||||||||||||| || ||||||||
Sbjct: 9826631 ggtcaatccgatatccctagagcaagcaccgtaaagatatactgcccaaaatgtgaagat 9826690
Query: 825 atctactacccacggtccaagtaccaagg 853
|||| |||||||| || || ||||||||
Sbjct: 9826691 gtctattacccacgatcaaaataccaagg 9826719
>gb|AU239951.1|AU239951 AU239951 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-41-H19 5',
mRNA sequence
Length = 551
Score = 91.7 bits (46), Expect = 3e-016
Identities = 115/138 (83%)
Strand = Plus / Plus
Query: 381 gaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatggtattgc 440
|||| |||||| || ||||| ||||||||||| |||||||||||||| || |||| |||
Sbjct: 324 gaagaatcagaggtcagtggttctgatggagaggacacctcgtggatatcttggttctgc 383
Query: 441 aacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttc 500
||| | | ||||| ||||||||||||||||| |||||||| ||||| || || |||||
Sbjct: 384 aaccttcgtgggaacgagttcttctgtgaagttgatgatgattacatccaggatgacttt 443
Query: 501 aacctttgtggcctcagc 518
||| | ||||| ||||||
Sbjct: 444 aacttgtgtggactcagc 461
>emb|AL089456.1|CNS00TAQ Arabidopsis thaliana genome survey sequence SP6 end of BAC T3P6 of
TAMU library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 300
Score = 89.7 bits (45), Expect = 1e-015
Identities = 114/137 (83%)
Strand = Plus / Plus
Query: 381 gaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatggtattgc 440
|||| |||||| || ||||| ||||||||||| |||||||||||||| || |||| |||
Sbjct: 164 gaagaatcagaggtcagtggttctgatggagaggacacctcgtggatatcttggttctgc 223
Query: 441 aacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttc 500
||| | | ||||| ||||||||||||||||| |||||||| ||||| || || |||||
Sbjct: 224 aaccttcgtgggaacgagttcttctgtgaagttgatgatgattacatccaggatgacttt 283
Query: 501 aacctttgtggcctcag 517
||| | ||||| |||||
Sbjct: 284 aacttgtgtggactcag 300
>gb|BP791893.1|BP791893 BP791893 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-49-G08 3',
mRNA sequence
Length = 405
Score = 89.7 bits (45), Expect = 1e-015
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 822 gacatctactacccacggtccaagtaccaaggcaacatcgacggcgcatactttgggaca 881
||||| || |||||||| || ||||| ||||||||||| || || || ||||||||||||
Sbjct: 405 gacatttattacccacgatcaaagtatcaaggcaacattgatggagcttactttgggaca 346
Query: 882 acgttccctcatctgttcctgatgacatacgagcacctcaagcca 926
||||| || ||||||||||||||||| || | ||| |||||||||
Sbjct: 345 acgtttccacatctgttcctgatgacttatgggcatctcaagcca 301
>emb|BX822193.1|CNS0A6ZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB19ZF05 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1318
Score = 89.7 bits (45), Expect = 1e-015
Identities = 159/197 (80%)
Strand = Plus / Plus
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaa 674
||||||||||| |||||||| ||||| || || |||| || |||||| |||| | ||||
Sbjct: 613 gaatcagctgctgagatgctatatggtctaattcatgttcgttacattttgactactaaa 672
Query: 675 ggactggctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtgtt 734
||| ||||||||||| |||||||| ||||||| ||| || ||| | |||||| | |||
Sbjct: 673 ggaatggctgcaatgactgagaagtacaagaactgtgatttcgggagatgcccgagagtt 732
Query: 735 tactgctgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagtacc 794
| ||| || ||||| | || || |||||||||||||| || |||| |||| |||||
Sbjct: 733 ttctgttgcggtcagtcttgtcttccagttggacaatccgatatcccgagatcgagtact 792
Query: 795 gtgaagatatactgccc 811
|||||||||||||||||
Sbjct: 793 gtgaagatatactgccc 809
Score = 85.7 bits (43), Expect = 2e-014
Identities = 104/123 (84%), Gaps = 1/123 (0%)
Strand = Plus / Plus
Query: 447 agagggaatgagttcttctgtgaagt-cgatgatgactacattcaagacgacttcaacct 505
||||||||||| |||||||||||||| |||||| || || |||||||| || ||||| ||
Sbjct: 444 agagggaatgatttcttctgtgaagttcgatgaagattatattcaagatgatttcaatct 503
Query: 506 ttgtggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatat 565
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Sbjct: 504 ttgtggtttaagtggtcaagtcccttactatgattatgcacttgatctcattttagatgt 563
Query: 566 tga 568
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Sbjct: 564 tga 566
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 581,281
Number of Sequences: 1013581
Number of extensions: 581281
Number of successful extensions: 44888
Number of sequences better than 0.5: 67
Number of HSP's better than 0.5 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43343
Number of HSP's gapped (non-prelim): 1495
length of query: 1385
length of database: 908,940,872
effective HSP length: 21
effective length of query: 1364
effective length of database: 887,655,671
effective search space: 1210762335244
effective search space used: 1210762335244
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)