BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478065.2.2
(688 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BP635838.1|BP635838 BP635838 RAFL18 Arabidopsis thaliana... 107 3e-021
gb|AV786726.1|AV786726 AV786726 RAFL6 Arabidopsis thaliana ... 100 6e-019
gb|AV786750.1|AV786750 AV786750 RAFL6 Arabidopsis thaliana ... 100 6e-019
gb|AV787052.1|AV787052 AV787052 RAFL6 Arabidopsis thaliana ... 100 6e-019
gb|AV790705.1|AV790705 AV790705 RAFL6 Arabidopsis thaliana ... 100 6e-019
gb|AV802292.1|AV802292 AV802292 RAFL9 Arabidopsis thaliana ... 100 6e-019
gb|AV806261.1|AV806261 AV806261 RAFL9 Arabidopsis thaliana ... 100 6e-019
gb|AV807145.1|AV807145 AV807145 RAFL9 Arabidopsis thaliana ... 100 6e-019
gb|AV828561.1|AV828561 AV828561 RAFL9 Arabidopsis thaliana ... 100 6e-019
gb|CB262134.1|CB262134 73-E8879-008-014-A20-pBl2 MPIZ-ADIS-... 100 6e-019
gb|CB264390.1|CB264390 66-E015022-035-004-C18-T7R MPIZ-ADIS... 100 6e-019
gb|CF652437.1|CF652437 55-L020524-066-003-M14-SP6P MPIZ-ADI... 100 6e-019
gb|AV533831.1|AV533831 AV533831 Arabidopsis thaliana flower... 100 6e-019
gb|AV534771.1|AV534771 AV534771 Arabidopsis thaliana flower... 100 6e-019
gb|CK118688.1|CK118688 216h22.p1 AtM1 Arabidopsis thaliana ... 100 6e-019
gb|BP573142.1|BP573142 BP573142 RAFL14 Arabidopsis thaliana... 100 6e-019
gb|BP587278.1|BP587278 BP587278 RAFL15 Arabidopsis thaliana... 100 6e-019
gb|BP587869.1|BP587869 BP587869 RAFL15 Arabidopsis thaliana... 100 6e-019
gb|BP591211.1|BP591211 BP591211 RAFL15 Arabidopsis thaliana... 100 6e-019
gb|BP624419.1|BP624419 BP624419 RAFL17 Arabidopsis thaliana... 100 6e-019
gb|BP632572.1|BP632572 BP632572 RAFL17 Arabidopsis thaliana... 100 6e-019
gb|BP638611.1|BP638611 BP638611 RAFL19 Arabidopsis thaliana... 100 6e-019
gb|BP645173.1|BP645173 BP645173 RAFL19 Arabidopsis thaliana... 100 6e-019
gb|BP791848.1|BP791848 BP791848 RAFL7 Arabidopsis thaliana ... 100 6e-019
gb|AY057566.1| Arabidopsis thaliana AT4g18100/F15J5_70 mRNA... 100 6e-019
gb|AY072399.1| Arabidopsis thaliana ribosomal protein L32 -... 100 6e-019
gb|BT000235.1| Arabidopsis thaliana ribosomal protein L32 -... 100 6e-019
gb|AY086736.1| Arabidopsis thaliana clone 271605 mRNA, comp... 100 6e-019
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 100 6e-019
emb|AL110123.1|ATF15J5 Arabidopsis thaliana DNA chromosome ... 100 6e-019
emb|AL161547.2|ATCHRIV47 Arabidopsis thaliana DNA chromosom... 100 6e-019
emb|AL161548.2|ATCHRIV48 Arabidopsis thaliana DNA chromosom... 100 6e-019
ref|NM_117920.2| Arabidopsis thaliana structural constituen... 100 6e-019
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 100 6e-019
gb|BP583990.1|BP583990 BP583990 RAFL14 Arabidopsis thaliana... 96 1e-017
gb|CK118706.1|CK118706 216e01.p1 AtM1 Arabidopsis thaliana ... 94 4e-017
gb|BE037666.1|BE037666 AA02E06 AA Arabidopsis thaliana cDNA... 92 1e-016
gb|AV801846.1|AV801846 AV801846 RAFL9 Arabidopsis thaliana ... 92 1e-016
gb|BP571598.1|BP571598 BP571598 RAFL14 Arabidopsis thaliana... 92 1e-016
gb|BP574037.1|BP574037 BP574037 RAFL14 Arabidopsis thaliana... 92 1e-016
gb|BP622441.1|BP622441 BP622441 RAFL17 Arabidopsis thaliana... 92 1e-016
gb|BP654949.1|BP654949 BP654949 RAFL19 Arabidopsis thaliana... 92 1e-016
gb|BP666687.1|BP666687 BP666687 RAFL21 Arabidopsis thaliana... 92 1e-016
gb|BP666814.1|BP666814 BP666814 RAFL21 Arabidopsis thaliana... 92 1e-016
gb|BP780606.1|BP780606 BP780606 RAFL7 Arabidopsis thaliana ... 92 1e-016
gb|BP797201.1|BP797201 BP797201 RAFL14 Arabidopsis thaliana... 92 1e-016
emb|BX828680.1|CNS0A3L6 Arabidopsis thaliana Full-length cD... 92 1e-016
gb|BP815143.1|BP815143 BP815143 RAFL19 Arabidopsis thaliana... 90 6e-016
gb|BP843527.1|BP843527 BP843527 RAFL21 Arabidopsis thaliana... 90 6e-016
gb|BP853468.1|BP853468 BP853468 RAFL21 Arabidopsis thaliana... 90 6e-016
gb|BP859845.1|BP859845 BP859845 RAFL21 Arabidopsis thaliana... 90 6e-016
gb|BP863999.1|BP863999 BP863999 RAFL21 Arabidopsis thaliana... 90 6e-016
gb|AV829601.1|AV829601 AV829601 RAFL9 Arabidopsis thaliana ... 88 2e-015
gb|BP578691.1|BP578691 BP578691 RAFL14 Arabidopsis thaliana... 86 9e-015
gb|BP613996.1|BP613996 BP613996 RAFL16 Arabidopsis thaliana... 86 9e-015
gb|BP813684.1|BP813684 BP813684 RAFL19 Arabidopsis thaliana... 86 9e-015
gb|BP866168.1|BP866168 BP866168 RAFL21 Arabidopsis thaliana... 86 9e-015
gb|T22824.1|T22824 4832 Lambda-PRL2 Arabidopsis thaliana cD... 84 4e-014
gb|BP588245.1|BP588245 BP588245 RAFL15 Arabidopsis thaliana... 84 4e-014
gb|BP600239.1|BP600239 BP600239 RAFL16 Arabidopsis thaliana... 84 4e-014
gb|BP661036.1|BP661036 BP661036 RAFL21 Arabidopsis thaliana... 84 4e-014
gb|BP644518.1|BP644518 BP644518 RAFL19 Arabidopsis thaliana... 82 1e-013
gb|BP845385.1|BP845385 BP845385 RAFL21 Arabidopsis thaliana... 82 1e-013
gb|BP854497.1|BP854497 BP854497 RAFL21 Arabidopsis thaliana... 82 1e-013
gb|BP576270.1|BP576270 BP576270 RAFL14 Arabidopsis thaliana... 78 2e-012
gb|Z17739.1|Z17739 ATTS0313 Gif-SeedA+B Arabidopsis thalian... 78 2e-012
gb|BP563616.1|BP563616 BP563616 RAFL14 Arabidopsis thaliana... 74 4e-011
gb|BP858054.1|BP858054 BP858054 RAFL21 Arabidopsis thaliana... 74 4e-011
gb|AV807018.1|AV807018 AV807018 RAFL9 Arabidopsis thaliana ... 72 1e-010
gb|BP566544.1|BP566544 BP566544 RAFL14 Arabidopsis thaliana... 72 1e-010
gb|BP578736.1|BP578736 BP578736 RAFL14 Arabidopsis thaliana... 72 1e-010
gb|BP824441.1|BP824441 BP824441 RAFL19 Arabidopsis thaliana... 70 5e-010
gb|T22115.1|T22115 4123 Lambda-PRL2 Arabidopsis thaliana cD... 68 2e-009
gb|BP621953.1|BP621953 BP621953 RAFL17 Arabidopsis thaliana... 66 9e-009
gb|BP669539.1|BP669539 BP669539 RAFL21 Arabidopsis thaliana... 66 9e-009
gb|BP797175.1|BP797175 BP797175 RAFL14 Arabidopsis thaliana... 66 9e-009
gb|BP841891.1|BP841891 BP841891 RAFL21 Arabidopsis thaliana... 66 9e-009
gb|T42610.1|T42610 5873 Lambda-PRL2 Arabidopsis thaliana cD... 54 3e-005
gb|BP655915.1|BP655915 BP655915 RAFL19 Arabidopsis thaliana... 52 1e-004
gb|AA042212.1|AA042212 24533 CD4-13 Arabidopsis thaliana cD... 50 5e-004
gb|AV821743.1|AV821743 AV821743 RAFL4 Arabidopsis thaliana ... 50 5e-004
gb|CB264066.1|CB264066 95-E013840-035-001-M23-T7R MPIZ-ADIS... 50 5e-004
gb|BP654761.1|BP654761 BP654761 RAFL19 Arabidopsis thaliana... 50 5e-004
gb|BP813243.1|BP813243 BP813243 RAFL19 Arabidopsis thaliana... 50 5e-004
gb|AY042872.1| Arabidopsis thaliana ribosomal protein L32 (... 50 5e-004
gb|AY052193.1| Arabidopsis thaliana AT5g46430/K11I1_2 mRNA,... 50 5e-004
gb|AF446871.1|AF446871 Arabidopsis thaliana AT5g46430/K11I1... 50 5e-004
gb|BT002551.1| Arabidopsis thaliana ribosomal protein L32 (... 50 5e-004
ref|NM_180811.1| Arabidopsis thaliana structural constituen... 50 5e-004
ref|NM_124013.2| Arabidopsis thaliana structural constituen... 50 5e-004
gb|AI993586.1|AI993586 701496688 A. thaliana, Ohio State cl... 48 0.002
gb|AV787800.1|AV787800 AV787800 RAFL6 Arabidopsis thaliana ... 48 0.002
gb|AV532744.1|AV532744 AV532744 Arabidopsis thaliana flower... 48 0.002
gb|BP585521.1|BP585521 BP585521 RAFL15 Arabidopsis thaliana... 48 0.002
gb|BP629325.1|BP629325 BP629325 RAFL17 Arabidopsis thaliana... 48 0.002
gb|BP649128.1|BP649128 BP649128 RAFL19 Arabidopsis thaliana... 48 0.002
gb|BP796437.1|BP796437 BP796437 RAFL5 Arabidopsis thaliana ... 48 0.002
gb|BP827596.1|BP827596 BP827596 RAFL19 Arabidopsis thaliana... 48 0.002
gb|BP848559.1|BP848559 BP848559 RAFL21 Arabidopsis thaliana... 48 0.002
gb|BP860989.1|BP860989 BP860989 RAFL21 Arabidopsis thaliana... 48 0.002
emb|BX830633.1|CNS0A1Y2 Arabidopsis thaliana Full-length cD... 48 0.002
dbj|AB019223.1| Arabidopsis thaliana genomic DNA, chromosom... 48 0.002
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 48 0.002
gb|BP848699.1|BP848699 BP848699 RAFL21 Arabidopsis thaliana... 46 0.008
gb|AQ960716.1|AQ960716 LERFG76TR LERA Arabidopsis thaliana ... 44 0.031
gb|T42519.1|T42519 5782 Lambda-PRL2 Arabidopsis thaliana cD... 44 0.031
gb|R65493.1|R65493 13997 Lambda-PRL2 Arabidopsis thaliana c... 44 0.031
gb|AV824803.1|AV824803 AV824803 RAFL6 Arabidopsis thaliana ... 44 0.031
gb|BP814812.1|BP814812 BP814812 RAFL19 Arabidopsis thaliana... 44 0.031
dbj|AP000410.1| Arabidopsis thaliana genomic DNA, chromosom... 44 0.031
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 44 0.031
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 44 0.031
gb|BP811694.1|BP811694 BP811694 RAFL19 Arabidopsis thaliana... 42 0.12
gb|BP814162.1|BP814162 BP814162 RAFL19 Arabidopsis thaliana... 42 0.12
gb|BP817312.1|BP817312 BP817312 RAFL19 Arabidopsis thaliana... 42 0.12
gb|BP818970.1|BP818970 BP818970 RAFL19 Arabidopsis thaliana... 42 0.12
gb|BP652533.1|BP652533 BP652533 RAFL19 Arabidopsis thaliana... 40 0.49
gb|BP659246.1|BP659246 BP659246 RAFL19 Arabidopsis thaliana... 40 0.49
gb|BP796554.1|BP796554 BP796554 RAFL5 Arabidopsis thaliana ... 40 0.49
gb|BP865926.1|BP865926 BP865926 RAFL21 Arabidopsis thaliana... 40 0.49
>gb|BP635838.1|BP635838 BP635838 RAFL18 Arabidopsis thaliana cDNA clone RAFL18-02-H14 3',
mRNA sequence
Length = 455
Score = 107 bits (54), Expect = 3e-021
Identities = 132/158 (83%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| ||||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 309 tgagctcgagttgtttatgatgcacaacaggacttactgtgctgagattgctcacaacgt 250
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 249 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 190
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 189 caacaggcttgctaggctccgtagccaagaagacgagt 152
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 374 tctgacaagaagactcgtcactatcttcccaa 343
>gb|AV786726.1|AV786726 AV786726 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-72-J18 3',
mRNA sequence
Length = 394
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 322 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 263
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 262 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 203
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 202 caacaggcttgctaggctccgtagccaagaagacgagt 165
>gb|AV786750.1|AV786750 AV786750 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-72-L02 3',
mRNA sequence
Length = 425
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 329 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 270
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 269 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 210
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 209 caacaggcttgctaggctccgtagccaagaagacgagt 172
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 394 tctgacaagaagactcgtcactatcttcccaa 363
>gb|AV787052.1|AV787052 AV787052 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-73-O04 3',
mRNA sequence
Length = 397
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 316 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 257
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 256 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 197
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 196 caacaggcttgctaggctccgtagccaagaagacgagt 159
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 380 tctgacaagaagactcgtcactatcttcccaa 349
>gb|AV790705.1|AV790705 AV790705 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-89-N17 3',
mRNA sequence
Length = 426
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 310 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 251
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 250 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 191
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 190 caacaggcttgctaggctccgtagccaagaagacgagt 153
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 375 tctgacaagaagactcgtcactatcttcccaa 344
>gb|AV802292.1|AV802292 AV802292 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-31-G12 3',
mRNA sequence
Length = 417
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 309 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 250
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 249 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 190
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 189 caacaggcttgctaggctccgtagccaagaagacgagt 152
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 374 tctgacaagaagactcgtcactatcttcccaa 343
>gb|AV806261.1|AV806261 AV806261 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-45-O10 3',
mRNA sequence
Length = 405
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 356 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 297
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 296 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 237
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 236 caacaggcttgctaggctccgtagccaagaagacgagt 199
>gb|AV807145.1|AV807145 AV807145 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-49-E18 3',
mRNA sequence
Length = 439
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 316 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 257
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 256 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 197
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 196 caacaggcttgctaggctccgtagccaagaagacgagt 159
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 381 tctgacaagaagactcgtcactatcttcccaa 350
>gb|AV828561.1|AV828561 AV828561 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-29-M11 5',
mRNA sequence
Length = 579
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Plus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 286 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 345
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 346 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 405
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 406 caacaggcttgctaggctccgtagccaagaagacgagt 443
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 221 tctgacaagaagactcgtcactatcttcccaa 252
>gb|CB262134.1|CB262134 73-E8879-008-014-A20-pBl2 MPIZ-ADIS-008 Arabidopsis thaliana cDNA
clone MPIZp767A2014Q 5-PRIME, mRNA sequence
Length = 424
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Plus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 111 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 170
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 171 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 230
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 231 caacaggcttgctaggctccgtagccaagaagacgagt 268
>gb|CB264390.1|CB264390 66-E015022-035-004-C18-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000C184Q 5-PRIME, mRNA sequence
Length = 609
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Plus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 266 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 325
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 326 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 385
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 386 caacaggcttgctaggctccgtagccaagaagacgagt 423
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 201 tctgacaagaagactcgtcactatcttcccaa 232
>gb|CF652437.1|CF652437 55-L020524-066-003-M14-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001M143Q 5-PRIME, mRNA sequence
Length = 656
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Plus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 271 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 330
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 331 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 390
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 391 caacaggcttgctaggctccgtagccaagaagacgagt 428
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 206 tctgacaagaagactcgtcactatcttcccaa 237
>gb|AV533831.1|AV533831 AV533831 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB068f12F 3', mRNA sequence
Length = 477
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Plus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 239 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 298
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 299 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 358
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 359 caacaggcttgctaggctccgtagccaagaagacgagt 396
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 174 tctgacaagaagactcgtcactatcttcccaa 205
>gb|AV534771.1|AV534771 AV534771 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB085g02F 3', mRNA sequence
Length = 413
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 311 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 252
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 251 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 192
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 191 caacaggcttgctaggctccgtagccaagaagacgagt 154
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 376 tctgacaagaagactcgtcactatcttcccaa 345
>gb|CK118688.1|CK118688 216h22.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011H22216
5-PRIME, mRNA sequence
Length = 562
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Plus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 266 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 325
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 326 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 385
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 386 caacaggcttgctaggctccgtagccaagaagacgagt 423
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 201 tctgacaagaagactcgtcactatcttcccaa 232
>gb|BP573142.1|BP573142 BP573142 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-83-B17 3',
mRNA sequence
Length = 442
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 310 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 251
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 250 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 191
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 190 caacaggcttgctaggctccgtagccaagaagacgagt 153
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 375 tctgacaagaagactcgtcactatcttcccaa 344
>gb|BP587278.1|BP587278 BP587278 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-41-O06 3',
mRNA sequence
Length = 429
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 310 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 251
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 250 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 191
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 190 caacaggcttgctaggctccgtagccaagaagacgagt 153
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 375 tctgacaagaagactcgtcactatcttcccaa 344
>gb|BP587869.1|BP587869 BP587869 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-44-D07 3',
mRNA sequence
Length = 416
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 310 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 251
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 250 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 191
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 190 caacaggcttgctaggctccgtagccaagaagacgagt 153
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 375 tctgacaagaagactcgtcactatcttcccaa 344
>gb|BP591211.1|BP591211 BP591211 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-13-N03 3',
mRNA sequence
Length = 428
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 310 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 251
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 250 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 191
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 190 caacaggcttgctaggctccgtagccaagaagacgagt 153
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 375 tctgacaagaagactcgtcactatcttcccaa 344
>gb|BP624419.1|BP624419 BP624419 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-40-C23 3',
mRNA sequence
Length = 431
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 321 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 262
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 261 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 202
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 201 caacaggcttgctaggctccgtagccaagaagacgagt 164
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 386 tctgacaagaagactcgtcactatcttcccaa 355
>gb|BP632572.1|BP632572 BP632572 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-27-J24 3',
mRNA sequence
Length = 387
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 310 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 251
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 250 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 191
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 190 caacaggcttgctaggctccgtagccaagaagacgagt 153
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 374 tctgacaagaagactcgtcactatcttcccaa 343
>gb|BP638611.1|BP638611 BP638611 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-44-D10 3',
mRNA sequence
Length = 397
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 394 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 335
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 334 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 275
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 274 caacaggcttgctaggctccgtagccaagaagacgagt 237
>gb|BP645173.1|BP645173 BP645173 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-67-O12 3',
mRNA sequence
Length = 412
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 322 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 263
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 262 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 203
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 202 caacaggcttgctaggctccgtagccaagaagacgagt 165
>gb|BP791848.1|BP791848 BP791848 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-49-D17 3',
mRNA sequence
Length = 403
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 303 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 244
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 243 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 184
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 183 caacaggcttgctaggctccgtagccaagaagacgagt 146
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 368 tctgacaagaagactcgtcactatcttcccaa 337
>gb|AY057566.1| Arabidopsis thaliana AT4g18100/F15J5_70 mRNA, complete cds
Length = 648
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Plus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 285 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 344
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 345 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 404
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 405 caacaggcttgctaggctccgtagccaagaagacgagt 442
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 220 tctgacaagaagactcgtcactatcttcccaa 251
>gb|AY072399.1| Arabidopsis thaliana ribosomal protein L32 -like protein
(At4g18100) mRNA, complete cds
Length = 592
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Plus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 285 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 344
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 345 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 404
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 405 caacaggcttgctaggctccgtagccaagaagacgagt 442
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 220 tctgacaagaagactcgtcactatcttcccaa 251
>gb|BT000235.1| Arabidopsis thaliana ribosomal protein L32 -like protein
(At4g18100) mRNA, complete cds
Length = 458
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Plus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 243 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 302
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 303 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 362
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 363 caacaggcttgctaggctccgtagccaagaagacgagt 400
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 178 tctgacaagaagactcgtcactatcttcccaa 209
>gb|AY086736.1| Arabidopsis thaliana clone 271605 mRNA, complete sequence
Length = 643
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Plus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 311 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 370
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 371 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 430
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 431 caacaggcttgctaggctccgtagccaagaagacgagt 468
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 246 tctgacaagaagactcgtcactatcttcccaa 277
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 5948630 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 5948571
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 5948570 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 5948511
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 5948510 caacaggcttgctaggctccgtagccaagaagacgagt 5948473
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 5948695 tctgacaagaagactcgtcactatcttcccaa 5948664
>emb|AL110123.1|ATF15J5 Arabidopsis thaliana DNA chromosome 4, BAC clone F15J5 (ESSA project)
Length = 58427
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 22747 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 22688
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 22687 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 22628
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 22627 caacaggcttgctaggctccgtagccaagaagacgagt 22590
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 22812 tctgacaagaagactcgtcactatcttcccaa 22781
>emb|AL161547.2|ATCHRIV47 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 47
Length = 198067
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 196223 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 196164
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 196163 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 196104
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 196103 caacaggcttgctaggctccgtagccaagaagacgagt 196066
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 196288 tctgacaagaagactcgtcactatcttcccaa 196257
>emb|AL161548.2|ATCHRIV48 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 48
Length = 194143
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 3156 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 3097
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 3096 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 3037
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 3036 caacaggcttgctaggctccgtagccaagaagacgagt 2999
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 3221 tctgacaagaagactcgtcactatcttcccaa 3190
>ref|NM_117920.2| Arabidopsis thaliana structural constituent of ribosome AT4G18100
mRNA, complete cds
Length = 697
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Plus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 308 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 367
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 368 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 427
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 428 caacaggcttgctaggctccgtagccaagaagacgagt 465
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 243 tctgacaagaagactcgtcactatcttcccaa 274
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 99.6 bits (50), Expect = 6e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 10035886 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 10035827
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 10035826 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 10035767
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 10035766 caacaggcttgctaggctccgtagccaagaagacgagt 10035729
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 10035951 tctgacaagaagactcgtcactatcttcccaa 10035920
>gb|BP583990.1|BP583990 BP583990 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-44-G02 3',
mRNA sequence
Length = 418
Score = 95.6 bits (48), Expect = 1e-017
Identities = 111/132 (84%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 310 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 251
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 250 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 191
Query: 489 caataagcttgc 500
||| | ||||||
Sbjct: 190 caacaggcttgc 179
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 375 tctgacaagaagactcgtcactatcttcccaa 344
>gb|CK118706.1|CK118706 216e01.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011E01216
5-PRIME, mRNA sequence
Length = 447
Score = 93.7 bits (47), Expect = 4e-017
Identities = 130/158 (82%)
Strand = Plus / Plus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 266 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 325
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| | ||
Sbjct: 326 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgntac 385
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 386 caacaggcttgctaggctccgtagccaagaagacgagt 423
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 201 tctgacaagaagactcgtcactatcttcccaa 232
>gb|BE037666.1|BE037666 AA02E06 AA Arabidopsis thaliana cDNA 5' similar to ribosomal
protein l32-like protein, mRNA sequence
Length = 571
Score = 91.7 bits (46), Expect = 1e-016
Identities = 130/158 (82%)
Strand = Plus / Plus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 273 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 332
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| ||| || ||
Sbjct: 333 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgctgttac 392
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 393 caacaggcttgctaggctccgtagccaagaagacgagt 430
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 208 tctgacaagaagactcgtcactatcttcccaa 239
>gb|AV801846.1|AV801846 AV801846 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-29-M11 3',
mRNA sequence
Length = 398
Score = 91.7 bits (46), Expect = 1e-016
Identities = 118/142 (83%)
Strand = Plus / Minus
Query: 385 atgatgcacaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgc 444
||||||||||||||||| ||||||||||| || || |||||||| |||||||||||| |
Sbjct: 293 atgatgcacaacaggacttactgtgctgagattgctcacaacgtctccactaagaagaga 234
Query: 445 aaggaaatcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgt 504
|||| ||| || ||| ||||| ||||||| ||| |||| || ||||| | |||||| |
Sbjct: 233 aaggcaattgttgagagagcttctcagctagacgttgttgttaccaacaggcttgctagg 174
Query: 505 ctccgcagccaggaagatgagt 526
||||| ||||| ||||| ||||
Sbjct: 173 ctccgtagccaagaagacgagt 152
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 375 tctgacaagaagactcgtcactatcttcccaa 344
>gb|BP571598.1|BP571598 BP571598 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-76-N22 3',
mRNA sequence
Length = 450
Score = 91.7 bits (46), Expect = 1e-016
Identities = 118/142 (83%)
Strand = Plus / Minus
Query: 385 atgatgcacaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgc 444
||||||||||||||||| ||||||||||| || || |||||||| |||||||||||| |
Sbjct: 294 atgatgcacaacaggacttactgtgctgagattgctcacaacgtctccactaagaagaga 235
Query: 445 aaggaaatcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgt 504
|||| ||| || ||| ||||| ||||||| ||| |||| || ||||| | |||||| |
Sbjct: 234 aaggcaattgttgagagagcttctcagctagacgttgttgttaccaacaggcttgctagg 175
Query: 505 ctccgcagccaggaagatgagt 526
||||| ||||| ||||| ||||
Sbjct: 174 ctccgtagccaagaagacgagt 153
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 376 tctgacaagaagactcgtcactatcttcccaa 345
>gb|BP574037.1|BP574037 BP574037 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-86-I19 3',
mRNA sequence
Length = 398
Score = 91.7 bits (46), Expect = 1e-016
Identities = 130/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | || |||||||||||||| ||||||||||| || || ||||||||
Sbjct: 310 tgagctcgagttgttgattatgcacaacaggacttactgtgctgagattgctcacaacgt 251
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 250 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagaccttgttgttac 191
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 190 caacaggcttgctaggctccgtagccaagaagacgagt 153
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 375 tctgacaagaagactcgtcactatcttcccaa 344
>gb|BP622441.1|BP622441 BP622441 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-03-D17 3',
mRNA sequence
Length = 367
Score = 91.7 bits (46), Expect = 1e-016
Identities = 118/142 (83%)
Strand = Plus / Minus
Query: 385 atgatgcacaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgc 444
||||||||||||||||| ||||||||||| || || |||||||| |||||||||||| |
Sbjct: 293 atgatgcacaacaggacttactgtgctgagattgctcacaacgtctccactaagaagaga 234
Query: 445 aaggaaatcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgt 504
|||| ||| || ||| ||||| ||||||| ||| |||| || ||||| | |||||| |
Sbjct: 233 aaggcaattgttgagagagcttctcagctagacgttgttgttaccaacaggcttgctagg 174
Query: 505 ctccgcagccaggaagatgagt 526
||||| ||||| ||||| ||||
Sbjct: 173 ctccgtagccaagaagacgagt 152
>gb|BP654949.1|BP654949 BP654949 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-19-G17 3',
mRNA sequence
Length = 388
Score = 91.7 bits (46), Expect = 1e-016
Identities = 130/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| |||| |||||| || || ||||||||
Sbjct: 336 tgagctcgagttgttgatgatgcacaacaggacttactttgctgagattgctcacaacgt 277
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 276 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagacgttgttgttac 217
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 216 caacaggcttgctaggctccgtagccaagaagacgagt 179
>gb|BP666687.1|BP666687 BP666687 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-20-J12 3',
mRNA sequence
Length = 406
Score = 91.7 bits (46), Expect = 1e-016
Identities = 97/114 (85%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 287 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 228
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgt 482
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| ||||
Sbjct: 227 ctccactaagaagagaaaggcaattgttgagagagcttctcagctagaccttgt 174
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 352 tctgacaagaagactcgtcactatcttcccaa 321
>gb|BP666814.1|BP666814 BP666814 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-21-A13 3',
mRNA sequence
Length = 435
Score = 91.7 bits (46), Expect = 1e-016
Identities = 130/158 (82%)
Strand = Plus / Minus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 316 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 257
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | ||| ||| || ||| ||||| ||||||| ||| |||| || ||
Sbjct: 256 ctccactaagaagagaaagccaattgttgagagagcttctcagctagacgttgttgttac 197
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 196 caacaggcttgctaggctccgtagccaagaagacgagt 159
>gb|BP780606.1|BP780606 BP780606 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-73-K24 3',
mRNA sequence
Length = 386
Score = 91.7 bits (46), Expect = 1e-016
Identities = 118/142 (83%)
Strand = Plus / Minus
Query: 385 atgatgcacaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgc 444
||||||||||||||||| ||||||||||| || || |||||||| |||||||||||| |
Sbjct: 306 atgatgcacaacaggacttactgtgctgagattgctcacaacgtctccactaagaagaga 247
Query: 445 aaggaaatcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgt 504
|||| ||| || ||| ||||| ||||||| ||| |||| || ||||| | |||||| |
Sbjct: 246 aaggcaattgttgagagagcttctcagctagacgttgttgttaccaacaggcttgctagg 187
Query: 505 ctccgcagccaggaagatgagt 526
||||| ||||| ||||| ||||
Sbjct: 186 ctccgtagccaagaagacgagt 165
>gb|BP797201.1|BP797201 BP797201 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-02-H20 5',
mRNA sequence
Length = 408
Score = 91.7 bits (46), Expect = 1e-016
Identities = 97/114 (85%)
Strand = Plus / Plus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 291 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 350
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgt 482
|||||||||||| | |||| ||| || ||| ||||| ||||||| ||| ||||
Sbjct: 351 ctccactaagaagagaaagggaattgttgagagagcttctcagctagacgttgt 404
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 226 tctgacaagaagactcgtcactatcttcccaa 257
>emb|BX828680.1|CNS0A3L6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL29ZE01 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 528
Score = 91.7 bits (46), Expect = 1e-016
Identities = 130/158 (82%)
Strand = Plus / Plus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 262 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 321
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcac 488
|||||||||||| | |||| ||| || ||| || || ||||||| ||| |||| || ||
Sbjct: 322 ctccactaagaagagaaaggcaattgttgagagaacttctcagctagacgttgttgttac 381
Query: 489 caataagcttgcccgtctccgcagccaggaagatgagt 526
||| | |||||| | ||||| ||||| ||||| ||||
Sbjct: 382 caacaggcttgctaggctccgtagccaagaagacgagt 419
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 197 tctgacaagaagactcgtcactatcttcccaa 228
>gb|BP815143.1|BP815143 BP815143 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-37-P04 5',
mRNA sequence
Length = 383
Score = 89.7 bits (45), Expect = 6e-016
Identities = 90/105 (85%)
Strand = Plus / Plus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 279 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 338
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagct 473
|||||||||||| | |||| ||| || ||| ||||| |||||||
Sbjct: 339 ctccactaagaagagaaaggcaattgttgagagagcttctcagct 383
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 214 tctgacaagaagactcgtcactatcttcccaa 245
>gb|BP843527.1|BP843527 BP843527 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-87-C11 5',
mRNA sequence
Length = 389
Score = 89.7 bits (45), Expect = 6e-016
Identities = 90/105 (85%)
Strand = Plus / Plus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 285 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 344
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagct 473
|||||||||||| | |||| ||| || ||| ||||| |||||||
Sbjct: 345 ctccactaagaagagaaagggaattgttgagagagcttctcagct 389
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 304 tctgacaagaagaccaggcactatcttcccaa 335
|||||||||||||| | ||||||||||||||
Sbjct: 220 tctgacaagaagactcgtcactatcttcccaa 251
>gb|BP853468.1|BP853468 BP853468 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-58-E15 5',
mRNA sequence
Length = 400
Score = 89.7 bits (45), Expect = 6e-016
Identities = 90/105 (85%)
Strand = Plus / Plus
Query: 369 tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||||| |||||| | ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 285 tgagctcgagttgttgatgatgcacaacaggacttactgtgctgagattgctcacaacgt 344
Query: 429 gtccactaagaagcgcaaggaaatcgtggagcgagctgctcagct 473
|||||||||||| | |||| ||| || ||| ||||| |||||||
Sbjct: 345 ctccactaagaagagaaaggcaattgttgagagagcttctcagct 389
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 244,612
Number of Sequences: 1013581
Number of extensions: 244612
Number of successful extensions: 17244
Number of sequences better than 0.5: 120
Number of HSP's better than 0.5 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 16523
Number of HSP's gapped (non-prelim): 713
length of query: 688
length of database: 908,940,872
effective HSP length: 20
effective length of query: 668
effective length of database: 888,669,252
effective search space: 593631060336
effective search space used: 593631060336
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)