BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2477970.2.1
(699 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BZ660988.1|BZ660988 SALK_024449.56.00.x Arabidopsis thal... 103 4e-020
gb|Z17767.1|Z17767 ATTS0341 Gif-SeedA+B Arabidopsis thalian... 103 4e-020
gb|AA395762.1|AA395762 25750 Lambda-PRL2 Arabidopsis thalia... 103 4e-020
gb|AA394408.1|AA394408 25991 Lambda-PRL2 Arabidopsis thalia... 103 4e-020
gb|N37546.1|N37546 18773 Lambda-PRL2 Arabidopsis thaliana c... 103 4e-020
gb|BE038478.1|BE038478 AA18B04 AA Arabidopsis thaliana cDNA... 103 4e-020
gb|CB262705.1|CB262705 50-E9778-008-018-D13-pbl2 MPIZ-ADIS-... 103 4e-020
gb|AV532253.1|AV532253 AV532253 Arabidopsis thaliana flower... 103 4e-020
gb|AV541108.1|AV541108 AV541108 Arabidopsis thaliana roots ... 103 4e-020
gb|AV551904.1|AV551904 AV551904 Arabidopsis thaliana roots ... 103 4e-020
gb|AV553920.1|AV553920 AV553920 Arabidopsis thaliana roots ... 103 4e-020
gb|AV554681.1|AV554681 AV554681 Arabidopsis thaliana roots ... 103 4e-020
gb|AV562746.1|AV562746 AV562746 Arabidopsis thaliana green ... 103 4e-020
gb|CK120986.1|CK120986 204p01.p1 AtM1 Arabidopsis thaliana ... 103 4e-020
gb|CK121659.1|CK121659 202f11.p1 AtM1 Arabidopsis thaliana ... 103 4e-020
gb|CB254880.1|CB254880 57-E018437-019-009-A15-T7R MPIZ-ADIS... 103 4e-020
gb|BP797969.1|BP797969 BP797969 RAFL14 Arabidopsis thaliana... 103 4e-020
gb|BP818611.1|BP818611 BP818611 RAFL19 Arabidopsis thaliana... 103 4e-020
gb|BP823712.1|BP823712 BP823712 RAFL19 Arabidopsis thaliana... 103 4e-020
gb|BP823751.1|BP823751 BP823751 RAFL19 Arabidopsis thaliana... 103 4e-020
gb|BP839348.1|BP839348 BP839348 RAFL19 Arabidopsis thaliana... 103 4e-020
gb|BP844986.1|BP844986 BP844986 RAFL21 Arabidopsis thaliana... 103 4e-020
gb|BP861206.1|BP861206 BP861206 RAFL21 Arabidopsis thaliana... 103 4e-020
emb|X91959.1|AT60SRL27 A.thaliana mRNA for 60S ribosomal pr... 103 4e-020
gb|AY039519.1| Arabidopsis thaliana At1g70600/F5A18_22 mRNA... 103 4e-020
gb|AY048228.1| Arabidopsis thaliana At1g70600/F5A18_22 mRNA... 103 4e-020
gb|AY091706.1| Arabidopsis thaliana At1g70600/F5A18_22 mRNA... 103 4e-020
gb|AY085573.1| Arabidopsis thaliana clone 15789 mRNA, compl... 103 4e-020
gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BA... 103 4e-020
gb|AC010796.7|AC010796 Arabidopsis thaliana chromosome 1 BA... 103 4e-020
emb|BX827775.1|CNS0A4FW Arabidopsis thaliana Full-length cD... 103 4e-020
emb|BX813428.1|CNS0AARB Arabidopsis thaliana Full-length cD... 103 4e-020
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 103 4e-020
ref|NM_105728.2| Arabidopsis thaliana structural constituen... 103 4e-020
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 103 4e-020
gb|BP799045.1|BP799045 BP799045 RAFL14 Arabidopsis thaliana... 100 6e-019
gb|Z17571.1|Z17571 ATTS0145 AC16H Arabidopsis thaliana cDNA... 98 2e-018
gb|H36934.1|H36934 15063 Lambda-PRL2 Arabidopsis thaliana c... 98 2e-018
gb|T13920.1|T13920 2085 Lambda-PRL2 Arabidopsis thaliana cD... 98 2e-018
gb|AV545214.1|AV545214 AV545214 Arabidopsis thaliana roots ... 98 2e-018
gb|AV557648.1|AV557648 AV557648 Arabidopsis thaliana green ... 98 2e-018
gb|CK118458.1|CK118458 217a10.p1 AtM1 Arabidopsis thaliana ... 98 2e-018
gb|CK120214.1|CK120214 208h18.p1 AtM1 Arabidopsis thaliana ... 98 2e-018
gb|BP560948.1|BP560948 BP560948 RAFL5 Arabidopsis thaliana ... 98 2e-018
gb|BP560558.2|BP560558 BP560558 RAFL4 Arabidopsis thaliana ... 98 2e-018
gb|BP806410.1|BP806410 BP806410 RAFL16 Arabidopsis thaliana... 98 2e-018
gb|BP834337.1|BP834337 BP834337 RAFL19 Arabidopsis thaliana... 98 2e-018
gb|BP841943.1|BP841943 BP841943 RAFL21 Arabidopsis thaliana... 98 2e-018
emb|BX817859.1|CNS0AEEA Arabidopsis thaliana Full-length cD... 98 2e-018
gb|BP837247.1|BP837247 BP837247 RAFL19 Arabidopsis thaliana... 96 1e-017
gb|BP862632.1|BP862632 BP862632 RAFL21 Arabidopsis thaliana... 96 1e-017
gb|T04400.1|T04400 447 Lambda-PRL2 Arabidopsis thaliana cDN... 94 4e-017
gb|BP814766.1|BP814766 BP814766 RAFL19 Arabidopsis thaliana... 94 4e-017
gb|BP850970.1|BP850970 BP850970 RAFL21 Arabidopsis thaliana... 94 4e-017
gb|BP851016.1|BP851016 BP851016 RAFL21 Arabidopsis thaliana... 94 4e-017
gb|B96816.1|B96816 T32N3TR TAMU Arabidopsis thaliana genomi... 92 2e-016
gb|AA042328.1|AA042328 24665 CD4-13 Arabidopsis thaliana cD... 92 2e-016
gb|AA712182.1|AA712182 31910 Lambda-PRL2 Arabidopsis thalia... 92 2e-016
gb|T46426.1|T46426 9689 Lambda-PRL2 Arabidopsis thaliana cD... 92 2e-016
gb|BE038678.1|BE038678 AB04A02 AB Arabidopsis thaliana cDNA... 92 2e-016
gb|BE039129.1|BE039129 AB09H12 AB Arabidopsis thaliana cDNA... 92 2e-016
gb|AV785239.1|AV785239 AV785239 RAFL6 Arabidopsis thaliana ... 92 2e-016
gb|AV831522.1|AV831522 AV831522 RAFL9 Arabidopsis thaliana ... 92 2e-016
gb|BU635016.1|BU635016 014E12 Infected Arabidopsis Leaf Ara... 92 2e-016
gb|CB261098.1|CB261098 30-E9571-012-004-K08-T7R MPIZ-ADIS-0... 92 2e-016
gb|CB261395.1|CB261395 71-E9571-012-004-M18-T7R MPIZ-ADIS-0... 92 2e-016
gb|CF652907.1|CF652907 84-L020135-066-001-G21-SP6P MPIZ-ADI... 92 2e-016
gb|CF652908.1|CF652908 84-L020135w-066-001-G21-SP6P MPIZ-AD... 92 2e-016
gb|CF652909.1|CF652909 84-L020164-066-001-G22-SP6P MPIZ-ADI... 92 2e-016
gb|BX837982.1|BX837982 BX837982 Arabidopsis thaliana Hormon... 92 2e-016
gb|BX838624.1|BX838624 BX838624 Arabidopsis thaliana Flower... 92 2e-016
gb|AV534429.1|AV534429 AV534429 Arabidopsis thaliana flower... 92 2e-016
gb|AV542029.1|AV542029 AV542029 Arabidopsis thaliana roots ... 92 2e-016
gb|CK117986.1|CK117986 208n16.p1 AtM1 Arabidopsis thaliana ... 92 2e-016
gb|CK118376.1|CK118376 217g10.p1 AtM1 Arabidopsis thaliana ... 92 2e-016
gb|CK118867.1|CK118867 215i12.p1 AtM1 Arabidopsis thaliana ... 92 2e-016
gb|CK120067.1|CK120067 209d07.p1 AtM1 Arabidopsis thaliana ... 92 2e-016
gb|CK120652.1|CK120652 206n08.p1 AtM1 Arabidopsis thaliana ... 92 2e-016
gb|BP820471.1|BP820471 BP820471 RAFL19 Arabidopsis thaliana... 92 2e-016
gb|BP822719.1|BP822719 BP822719 RAFL19 Arabidopsis thaliana... 92 2e-016
gb|BP826287.1|BP826287 BP826287 RAFL19 Arabidopsis thaliana... 92 2e-016
gb|BP833941.1|BP833941 BP833941 RAFL19 Arabidopsis thaliana... 92 2e-016
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 92 2e-016
gb|AF410280.1|AF410280 Arabidopsis thaliana At1g23290/F26F2... 92 2e-016
gb|AF324716.2| Arabidopsis thaliana At1g23290 (At1g23290/F2... 92 2e-016
gb|AF349525.1| Arabidopsis thaliana putative 60s ribosomal ... 92 2e-016
gb|BT000542.1| Arabidopsis thaliana 60s ribosomal protein l... 92 2e-016
gb|AY086256.1| Arabidopsis thaliana clone 23092 mRNA, compl... 92 2e-016
gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis tha... 92 2e-016
emb|BX814930.1|CNS0ABGE Arabidopsis thaliana Full-length cD... 92 2e-016
emb|BX814197.1|CNS0AC79 Arabidopsis thaliana Full-length cD... 92 2e-016
emb|BX814201.1|CNS0AC9G Arabidopsis thaliana Full-length cD... 92 2e-016
ref|NM_102178.2| Arabidopsis thaliana RPL27A (RIBOSOMAL PRO... 92 2e-016
emb|AL755178.1| Arabidopsis thaliana T-DNA flanking sequenc... 90 6e-016
gb|AV538526.1|AV538526 AV538526 Arabidopsis thaliana roots ... 90 6e-016
gb|BP841862.1|BP841862 BP841862 RAFL21 Arabidopsis thaliana... 90 6e-016
gb|BP861394.1|BP861394 BP861394 RAFL21 Arabidopsis thaliana... 90 6e-016
gb|B20969.1|B20969 T32N3-Sp6 TAMU Arabidopsis thaliana geno... 88 2e-015
gb|Z17521.1|Z17521 ATTS0095 AC16H Arabidopsis thaliana cDNA... 88 2e-015
gb|BP822952.1|BP822952 BP822952 RAFL19 Arabidopsis thaliana... 88 2e-015
gb|BP849453.1|BP849453 BP849453 RAFL21 Arabidopsis thaliana... 88 2e-015
gb|BP850104.1|BP850104 BP850104 RAFL21 Arabidopsis thaliana... 86 9e-015
gb|CB264765.1|CB264765 38-E013840-035-001-K09-T7R MPIZ-ADIS... 84 4e-014
gb|CB264794.1|CB264794 36-E015023-035-004-H09-T7R MPIZ-ADIS... 84 4e-014
gb|BP818762.1|BP818762 BP818762 RAFL19 Arabidopsis thaliana... 84 4e-014
gb|BP847225.1|BP847225 BP847225 RAFL21 Arabidopsis thaliana... 84 4e-014
gb|BP850066.1|BP850066 BP850066 RAFL21 Arabidopsis thaliana... 84 4e-014
gb|T21294.1|T21294 3302 Lambda-PRL2 Arabidopsis thaliana cD... 82 1e-013
gb|BP839136.1|BP839136 BP839136 RAFL19 Arabidopsis thaliana... 82 1e-013
gb|AV824091.1|AV824091 AV824091 RAFL6 Arabidopsis thaliana ... 80 6e-013
emb|AL755973.1| Arabidopsis thaliana T-DNA flanking sequenc... 78 2e-012
emb|BX001117.1| Arabidopsis thaliana T-DNA flanking sequenc... 78 2e-012
gb|Z26208.1|Z26208 ATTS1429 Versailles-VC Arabidopsis thali... 76 9e-012
gb|AV816309.1|AV816309 AV816309 RAFL9 Arabidopsis thaliana ... 76 9e-012
gb|BP582923.1|BP582923 BP582923 RAFL14 Arabidopsis thaliana... 76 9e-012
gb|AV535878.1|AV535878 AV535878 Arabidopsis thaliana flower... 74 4e-011
gb|BP799321.1|BP799321 BP799321 RAFL14 Arabidopsis thaliana... 74 4e-011
gb|BP835771.1|BP835771 BP835771 RAFL19 Arabidopsis thaliana... 74 4e-011
gb|B09357.1|B09357 T23I2-Sp6 TAMU Arabidopsis thaliana geno... 72 1e-010
gb|B12977.1|B12977 T23N2-Sp6 TAMU Arabidopsis thaliana geno... 72 1e-010
gb|AW004274.1|AW004274 701671488 A. thaliana, Columbia Col-... 72 1e-010
gb|AV819093.1|AV819093 AV819093 RAFL11 Arabidopsis thaliana... 72 1e-010
gb|BP847765.1|BP847765 BP847765 RAFL21 Arabidopsis thaliana... 72 1e-010
gb|AC012187.3|F13K23 Sequence of BAC F13K23 from Arabidopsi... 72 1e-010
gb|BP583518.1|BP583518 BP583518 RAFL14 Arabidopsis thaliana... 70 6e-010
gb|BP624495.1|BP624495 BP624495 RAFL17 Arabidopsis thaliana... 70 6e-010
gb|CF773260.1|CF773260 AG_FSL_14H05 Arabidopsis ag-1 35S:AG... 68 2e-009
gb|BP586563.1|BP586563 BP586563 RAFL15 Arabidopsis thaliana... 68 2e-009
gb|BP593596.1|BP593596 BP593596 RAFL15 Arabidopsis thaliana... 68 2e-009
gb|BP804187.1|BP804187 BP804187 RAFL14 Arabidopsis thaliana... 68 2e-009
gb|BP828987.1|BP828987 BP828987 RAFL19 Arabidopsis thaliana... 68 2e-009
gb|BP839383.1|BP839383 BP839383 RAFL19 Arabidopsis thaliana... 68 2e-009
gb|BP803544.1|BP803544 BP803544 RAFL14 Arabidopsis thaliana... 66 9e-009
gb|B20808.1|B20808 T29E19-Sp6 TAMU Arabidopsis thaliana gen... 64 3e-008
gb|T88243.1|T88243 11939 Lambda-PRL2 Arabidopsis thaliana c... 64 3e-008
gb|AV787516.1|AV787516 AV787516 RAFL6 Arabidopsis thaliana ... 64 3e-008
gb|BP608155.1|BP608155 BP608155 RAFL16 Arabidopsis thaliana... 64 3e-008
gb|BP623863.1|BP623863 BP623863 RAFL17 Arabidopsis thaliana... 64 3e-008
gb|CW794102.1|CW794102 WiscDsLox355H08 Arabidopsis thaliana... 60 5e-007
gb|BP595956.1|BP595956 BP595956 RAFL15 Arabidopsis thaliana... 60 5e-007
gb|BP827554.1|BP827554 BP827554 RAFL19 Arabidopsis thaliana... 60 5e-007
gb|AV545194.1|AV545194 AV545194 Arabidopsis thaliana roots ... 54 3e-005
gb|BP822527.1|BP822527 BP822527 RAFL19 Arabidopsis thaliana... 54 3e-005
gb|AV785678.1|AV785678 AV785678 RAFL6 Arabidopsis thaliana ... 52 1e-004
gb|BP570046.1|BP570046 BP570046 RAFL14 Arabidopsis thaliana... 52 1e-004
gb|BP839053.1|BP839053 BP839053 RAFL19 Arabidopsis thaliana... 52 1e-004
gb|DR749606.1|DR749606 84-L020255-065-002-D11-SeLB MPIZ-ADI... 52 1e-004
gb|CL490598.1|CL490598 SAIL_540_E01.v1 SAIL Collection Arab... 48 0.002
gb|BP568906.1|BP568906 BP568906 RAFL14 Arabidopsis thaliana... 48 0.002
gb|BP578793.1|BP578793 BP578793 RAFL14 Arabidopsis thaliana... 46 0.008
gb|AV786490.1|AV786490 AV786490 RAFL6 Arabidopsis thaliana ... 40 0.50
gb|BP592424.1|BP592424 BP592424 RAFL15 Arabidopsis thaliana... 40 0.50
>gb|BZ660988.1|BZ660988 SALK_024449.56.00.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_024449.56.00.x,
DNA sequence
Length = 462
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 260 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 319
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 320 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 379
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 380 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 439
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 440 aggaacaagttcttctgccc 459
>gb|Z17767.1|Z17767 ATTS0341 Gif-SeedA+B Arabidopsis thaliana cDNA clone YAP283T7 5'
similar to Rat 60S ribosomal protein L27A. Swiss-Prot
entry P18445., mRNA sequence
Length = 293
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 45 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 104
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 105 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 164
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 165 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 224
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 225 aggaacaagttcttctgccc 244
>gb|AA395762.1|AA395762 25750 Lambda-PRL2 Arabidopsis thaliana cDNA clone 290B6T7, mRNA
sequence
Length = 506
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 45 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 104
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 105 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 164
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 165 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 224
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 225 aggaacaagttcttctgccc 244
>gb|AA394408.1|AA394408 25991 Lambda-PRL2 Arabidopsis thaliana cDNA clone 308C10T7, mRNA
sequence
Length = 546
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 45 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 104
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 105 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 164
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 165 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 224
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 225 aggaacaagttcttctgccc 244
>gb|N37546.1|N37546 18773 Lambda-PRL2 Arabidopsis thaliana cDNA clone 205N1T7, mRNA
sequence
Length = 582
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 45 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 104
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 105 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 164
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 165 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 224
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 225 aggaacaagttcttctgccc 244
>gb|BE038478.1|BE038478 AA18B04 AA Arabidopsis thaliana cDNA 5' similar to ribosomal
protein, mRNA sequence
Length = 722
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 38 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 97
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 98 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 157
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 158 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 217
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 218 aggaacaagttcttctgccc 237
>gb|CB262705.1|CB262705 50-E9778-008-018-D13-pbl2 MPIZ-ADIS-008 Arabidopsis thaliana cDNA
clone MPIZp767D1318Q 5-PRIME, mRNA sequence
Length = 687
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 37 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 96
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 97 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 156
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 157 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 216
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 217 aggaacaagttcttctgccc 236
>gb|AV532253.1|AV532253 AV532253 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB039a07F 3', mRNA sequence
Length = 569
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 45 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 104
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 105 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 164
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 165 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 224
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 225 aggaacaagttcttctgccc 244
>gb|AV541108.1|AV541108 AV541108 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ16b09F 3', mRNA sequence
Length = 585
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Minus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 574 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 515
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 514 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 455
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 454 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 395
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 394 aggaacaagttcttctgccc 375
>gb|AV551904.1|AV551904 AV551904 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ16b09R 5', mRNA sequence
Length = 318
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 36 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 95
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 96 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 155
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 156 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 215
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 216 aggaacaagttcttctgccc 235
>gb|AV553920.1|AV553920 AV553920 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ76c09R 5', mRNA sequence
Length = 545
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 36 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 95
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 96 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 155
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 156 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 215
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 216 aggaacaagttcttctgccc 235
>gb|AV554681.1|AV554681 AV554681 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ98e09R 5', mRNA sequence
Length = 380
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 36 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 95
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 96 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 155
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 156 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 215
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 216 aggaacaagttcttctgccc 235
>gb|AV562746.1|AV562746 AV562746 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ175d04F 3', mRNA sequence
Length = 604
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Minus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 601 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 542
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 541 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 482
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 481 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 422
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 421 aggaacaagttcttctgccc 402
>gb|CK120986.1|CK120986 204p01.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011P01204
5-PRIME, mRNA sequence
Length = 725
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 51 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 110
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 111 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 170
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 171 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 230
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 231 aggaacaagttcttctgccc 250
>gb|CK121659.1|CK121659 202f11.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011F11202
5-PRIME, mRNA sequence
Length = 630
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 45 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 104
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 105 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 164
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 165 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 224
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 225 aggaacaagttcttctgccc 244
>gb|CB254880.1|CB254880 57-E018437-019-009-A15-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768A159Q 5-PRIME, mRNA sequence
Length = 554
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 63 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 122
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 123 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 182
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 183 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 242
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 243 aggaacaagttcttctgccc 262
>gb|BP797969.1|BP797969 BP797969 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-05-I12 5',
mRNA sequence
Length = 393
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 55 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 114
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 115 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 174
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 175 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 234
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 235 aggaacaagttcttctgccc 254
>gb|BP818611.1|BP818611 BP818611 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-48-K21 5',
mRNA sequence
Length = 389
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 60 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 119
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 120 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 179
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 180 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 239
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 240 aggaacaagttcttctgccc 259
>gb|BP823712.1|BP823712 BP823712 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-07-F02 5',
mRNA sequence
Length = 391
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 61 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 120
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 121 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 180
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 181 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 240
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 241 aggaacaagttcttctgccc 260
>gb|BP823751.1|BP823751 BP823751 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-07-G22 5',
mRNA sequence
Length = 392
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 61 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 120
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 121 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 180
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 181 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 240
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 241 aggaacaagttcttctgccc 260
>gb|BP839348.1|BP839348 BP839348 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-26-M11 5',
mRNA sequence
Length = 375
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 61 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 120
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 121 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 180
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 181 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 240
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 241 aggaacaagttcttctgccc 260
>gb|BP844986.1|BP844986 BP844986 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-92-C09 5',
mRNA sequence
Length = 388
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 61 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 120
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 121 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 180
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 181 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 240
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 241 aggaacaagttcttctgccc 260
>gb|BP861206.1|BP861206 BP861206 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-46-N11 5',
mRNA sequence
Length = 369
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 57 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 116
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 117 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 176
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 177 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 236
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 237 aggaacaagttcttctgccc 256
>emb|X91959.1|AT60SRL27 A.thaliana mRNA for 60S ribosomal protein L27a
Length = 641
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 45 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 104
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 105 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 164
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 165 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 224
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 225 aggaacaagttcttctgccc 244
>gb|AY039519.1| Arabidopsis thaliana At1g70600/F5A18_22 mRNA, complete cds
Length = 644
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 62 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 121
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 122 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 181
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 182 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 241
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 242 aggaacaagttcttctgccc 261
>gb|AY048228.1| Arabidopsis thaliana At1g70600/F5A18_22 mRNA, complete cds
Length = 665
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 62 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 121
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 122 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 181
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 182 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 241
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 242 aggaacaagttcttctgccc 261
>gb|AY091706.1| Arabidopsis thaliana At1g70600/F5A18_22 mRNA, complete cds
Length = 441
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 13 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 72
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 73 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 132
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 133 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 192
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 193 aggaacaagttcttctgccc 212
>gb|AY085573.1| Arabidopsis thaliana clone 15789 mRNA, complete sequence
Length = 628
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 64 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 123
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 124 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 183
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 184 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 243
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 244 aggaacaagttcttctgccc 263
>gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A18 genomic sequence, complete
sequence
Length = 108582
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 82993 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 83052
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 83053 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 83112
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 83113 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 83172
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 83173 aggaacaagttcttctgccc 83192
>gb|AC010796.7|AC010796 Arabidopsis thaliana chromosome 1 BAC F24J13 genomic sequence, complete
sequence
Length = 87400
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Minus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 71509 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 71450
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 71449 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 71390
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 71389 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 71330
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 71329 aggaacaagttcttctgccc 71310
>emb|BX827775.1|CNS0A4FW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH20ZA08 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 633
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Minus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 586 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 527
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 526 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 467
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 466 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 407
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 406 aggaacaagttcttctgccc 387
>emb|BX813428.1|CNS0AARB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB17ZA01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 682
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 56 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 115
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 116 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 175
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 176 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 235
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 236 aggaacaagttcttctgccc 255
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Minus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 10862911 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 10862852
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 10862851 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 10862792
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 10862791 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 10862732
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 10862731 aggaacaagttcttctgccc 10862712
>ref|NM_105728.2| Arabidopsis thaliana structural constituent of ribosome AT1G70600
mRNA, complete cds
Length = 737
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 64 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 123
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 124 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 183
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 184 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 243
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 244 aggaacaagttcttctgccc 263
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 103 bits (52), Expect = 4e-020
Identities = 163/200 (81%)
Strand = Plus / Minus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 26625259 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 26625200
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 26625199 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 26625140
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 26625139 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 26625080
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 26625079 aggaacaagttcttctgccc 26625060
Score = 91.7 bits (46), Expect = 2e-016
Identities = 118/142 (83%)
Strand = Plus / Plus
Query: 113 atcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccac 172
||||| |||||| | ||||| || |||||||| || ||||| || || ||||| ||||||
Sbjct: 8263059 atcggtaagcaccgtaagcatcccggaggtcgtggaaacgcaggaggtatgcatcaccac 8263118
Query: 173 cgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttc 232
| ||||||||||||||||||||||| || |||||||| || ||||| ||| | || |||
Sbjct: 8263119 aggatcctcttcgacaagtaccatccaggttacttcgggaaagttggtatgaggtatttc 8263178
Query: 233 cataagctccgcaacaagttct 254
|| ||||| || ||||||||||
Sbjct: 8263179 cacaagcttcgtaacaagttct 8263200
Score = 71.9 bits (36), Expect = 1e-010
Identities = 100/120 (83%), Gaps = 1/120 (0%)
Strand = Plus / Minus
Query: 141 gtcgcggtaacgccggtggcatgcaccaccaccgtatcctcttcgacaagtaccatccgg 200
|||| |||||||||||||| ||||| ||| |||||||||||||||||||||| ||||| |
Sbjct: 4423062 gtcgtggtaacgccggtggtatgcatcac-accgtatcctcttcgacaagtatcatcctg 4423004
Query: 201 gctacttcggcaaggttggcatgcgttacttccataagctccgcaacaagttctactgcc 260
| || || | || ||||| ||| | || ||||| |||||| | |||||||| |||||||
Sbjct: 4423003 gatattttgttaaagttggtatgaggtatttccacaagctcaggaacaagttttactgcc 4422944
>gb|BP799045.1|BP799045 BP799045 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-09-H21 5',
mRNA sequence
Length = 398
Score = 99.6 bits (50), Expect = 6e-019
Identities = 119/142 (83%)
Strand = Plus / Plus
Query: 113 atcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccac 172
||||| |||||| | ||||| ||||||||||| || ||||| || || ||||| ||||||
Sbjct: 86 atcggtaagcaccgtaagcatccgggaggtcgtggaaacgcaggaggtatgcatcaccac 145
Query: 173 cgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttc 232
| ||||||||||||||||||||||| || |||||||| || ||||| ||| | || |||
Sbjct: 146 aggatcctcttcgacaagtaccatccaggttacttcgggaaagttggtatgaggtatttc 205
Query: 233 cataagctccgcaacaagttct 254
|| ||||| || ||||||||||
Sbjct: 206 cacaagcttcgtaacaagttct 227
>gb|Z17571.1|Z17571 ATTS0145 AC16H Arabidopsis thaliana cDNA clone TAT4G2 5' similar to
60S ribosomal protein L27. Swiss-Prot entry P18445.,
mRNA sequence
Length = 291
Score = 97.6 bits (49), Expect = 2e-018
Identities = 124/149 (83%)
Strand = Plus / Plus
Query: 113 atcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccac 172
||||| |||||| | ||||| || |||||||| |||||||| || || ||||| ||||||
Sbjct: 38 atcggtaagcaccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccac 97
Query: 173 cgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttc 232
| ||||||||||||||||||||||| || |||||||| || ||||| ||| | || |||
Sbjct: 98 aggatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttc 157
Query: 233 cataagctccgcaacaagttctactgccc 261
|| ||||| | |||||||||| ||||||
Sbjct: 158 cacaagctgaggaacaagttcttctgccc 186
>gb|H36934.1|H36934 15063 Lambda-PRL2 Arabidopsis thaliana cDNA clone 181B13T7, mRNA
sequence
Length = 602
Score = 97.6 bits (49), Expect = 2e-018
Identities = 162/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| | |||| || || || ||||| |||
Sbjct: 50 ttcaagaagaacaggaagaagagaggtcacgtcagcnccggacatggacgtatcggtaag 109
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 110 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 169
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 170 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 229
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 230 aggaacaagttcttctgccc 249
>gb|T13920.1|T13920 2085 Lambda-PRL2 Arabidopsis thaliana cDNA clone 43F10T7, mRNA
sequence
Length = 363
Score = 97.6 bits (49), Expect = 2e-018
Identities = 157/193 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 55 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 114
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 115 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 174
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 175 ttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 234
Query: 242 cgcaacaagttct 254
| ||||||||||
Sbjct: 235 aggaacaagttct 247
>gb|AV545214.1|AV545214 AV545214 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ76c09F 3', mRNA sequence
Length = 527
Score = 97.6 bits (49), Expect = 2e-018
Identities = 124/149 (83%)
Strand = Plus / Minus
Query: 113 atcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccac 172
||||| |||||| | ||||| || |||||||| |||||||| || || ||||| ||||||
Sbjct: 490 atcggtaagcaccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccac 431
Query: 173 cgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttc 232
| ||||||||||||||||||||||| || |||||||| || ||||| ||| | || |||
Sbjct: 430 aggatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttc 371
Query: 233 cataagctccgcaacaagttctactgccc 261
|| ||||| | |||||||||| ||||||
Sbjct: 370 cacaagctgaggaacaagttcttctgccc 342
>gb|AV557648.1|AV557648 AV557648 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ074c09F 3', mRNA sequence
Length = 554
Score = 97.6 bits (49), Expect = 2e-018
Identities = 124/149 (83%)
Strand = Plus / Minus
Query: 113 atcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccac 172
||||| |||||| | ||||| || |||||||| |||||||| || || ||||| ||||||
Sbjct: 550 atcggtaagcaccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccac 491
Query: 173 cgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttc 232
| ||||||||||||||||||||||| || |||||||| || ||||| ||| | || |||
Sbjct: 490 aggatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttc 431
Query: 233 cataagctccgcaacaagttctactgccc 261
|| ||||| | |||||||||| ||||||
Sbjct: 430 cacaagctgaggaacaagttcttctgccc 402
>gb|CK118458.1|CK118458 217a10.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011A10217
5-PRIME, mRNA sequence
Length = 527
Score = 97.6 bits (49), Expect = 2e-018
Identities = 124/149 (83%)
Strand = Plus / Plus
Query: 113 atcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccac 172
||||| |||||| | ||||| || |||||||| |||||||| || || ||||| ||||||
Sbjct: 38 atcggtaagcaccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccac 97
Query: 173 cgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttc 232
| ||||||||||||||||||||||| || |||||||| || ||||| ||| | || |||
Sbjct: 98 aggatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttc 157
Query: 233 cataagctccgcaacaagttctactgccc 261
|| ||||| | |||||||||| ||||||
Sbjct: 158 cacaagctgaggaacaagttcttctgccc 186
>gb|CK120214.1|CK120214 208h18.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011H18208
5-PRIME, mRNA sequence
Length = 568
Score = 97.6 bits (49), Expect = 2e-018
Identities = 124/149 (83%)
Strand = Plus / Plus
Query: 113 atcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccac 172
||||| |||||| | ||||| || |||||||| |||||||| || || ||||| ||||||
Sbjct: 47 atcggtaagcaccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccac 106
Query: 173 cgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttc 232
| ||||||||||||||||||||||| || |||||||| || ||||| ||| | || |||
Sbjct: 107 aggatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttc 166
Query: 233 cataagctccgcaacaagttctactgccc 261
|| ||||| | |||||||||| ||||||
Sbjct: 167 cacaagctgaggaacaagttcttctgccc 195
>gb|BP560948.1|BP560948 BP560948 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-15-E14 5',
mRNA sequence
Length = 665
Score = 97.6 bits (49), Expect = 2e-018
Identities = 124/149 (83%)
Strand = Plus / Plus
Query: 113 atcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccac 172
||||| |||||| | ||||| || |||||||| |||||||| || || ||||| ||||||
Sbjct: 115 atcggtaagcaccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccac 174
Query: 173 cgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttc 232
| ||||||||||||||||||||||| || |||||||| || ||||| ||| | || |||
Sbjct: 175 aggatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttc 234
Query: 233 cataagctccgcaacaagttctactgccc 261
|| ||||| | |||||||||| ||||||
Sbjct: 235 cacaagctgaggaacaagttcttctgccc 263
>gb|BP560558.2|BP560558 BP560558 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-09-J06 5',
mRNA sequence
Length = 343
Score = 97.6 bits (49), Expect = 2e-018
Identities = 124/149 (83%)
Strand = Plus / Plus
Query: 113 atcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccac 172
||||| |||||| | ||||| || |||||||| |||||||| || || ||||| ||||||
Sbjct: 114 atcggtaagcaccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccac 173
Query: 173 cgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttc 232
| ||||||||||||||||||||||| || |||||||| || ||||| ||| | || |||
Sbjct: 174 aggatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttc 233
Query: 233 cataagctccgcaacaagttctactgccc 261
|| ||||| | |||||||||| ||||||
Sbjct: 234 cacaagctgaggaacaagttcttctgccc 262
>gb|BP806410.1|BP806410 BP806410 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-09-L07 5',
mRNA sequence
Length = 383
Score = 97.6 bits (49), Expect = 2e-018
Identities = 124/149 (83%)
Strand = Plus / Plus
Query: 113 atcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccac 172
||||| |||||| | ||||| || |||||||| |||||||| || || ||||| ||||||
Sbjct: 113 atcggtaagcaccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccac 172
Query: 173 cgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttc 232
| ||||||||||||||||||||||| || |||||||| || ||||| ||| | || |||
Sbjct: 173 aggatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttc 232
Query: 233 cataagctccgcaacaagttctactgccc 261
|| ||||| | |||||||||| ||||||
Sbjct: 233 cacaagctgaggaacaagttcttctgccc 261
>gb|BP834337.1|BP834337 BP834337 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-99-I12 5',
mRNA sequence
Length = 400
Score = 97.6 bits (49), Expect = 2e-018
Identities = 124/149 (83%)
Strand = Plus / Plus
Query: 113 atcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccac 172
||||| |||||| | ||||| || |||||||| |||||||| || || ||||| ||||||
Sbjct: 114 atcggtaagcaccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccac 173
Query: 173 cgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttc 232
| ||||||||||||||||||||||| || |||||||| || ||||| ||| | || |||
Sbjct: 174 aggatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttc 233
Query: 233 cataagctccgcaacaagttctactgccc 261
|| ||||| | |||||||||| ||||||
Sbjct: 234 cacaagctgaggaacaagttcttctgccc 262
>gb|BP841943.1|BP841943 BP841943 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-52-K20 5',
mRNA sequence
Length = 388
Score = 97.6 bits (49), Expect = 2e-018
Identities = 124/149 (83%)
Strand = Plus / Plus
Query: 113 atcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccac 172
||||| |||||| | ||||| || |||||||| |||||||| || || ||||| ||||||
Sbjct: 107 atcggtaagcaccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccac 166
Query: 173 cgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttc 232
| ||||||||||||||||||||||| || |||||||| || ||||| ||| | || |||
Sbjct: 167 aggatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttc 226
Query: 233 cataagctccgcaacaagttctactgccc 261
|| ||||| | |||||||||| ||||||
Sbjct: 227 cacaagctgaggaacaagttcttctgccc 255
>emb|BX817859.1|CNS0AEEA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL45ZD07 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 646
Score = 97.6 bits (49), Expect = 2e-018
Identities = 124/149 (83%)
Strand = Plus / Plus
Query: 113 atcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccac 172
||||| |||||| | ||||| || |||||||| |||||||| || || ||||| ||||||
Sbjct: 102 atcggtaagcaccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccac 161
Query: 173 cgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttc 232
| ||||||||||||||||||||||| || |||||||| || ||||| ||| | || |||
Sbjct: 162 aggatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgaggtatttc 221
Query: 233 cataagctccgcaacaagttctactgccc 261
|| ||||| | |||||||||| ||||||
Sbjct: 222 cacaagctgaggaacaagttcttctgccc 250
>gb|BP837247.1|BP837247 BP837247 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-19-M17 5',
mRNA sequence
Length = 387
Score = 95.6 bits (48), Expect = 1e-017
Identities = 162/200 (81%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || ||||| |||||| || || || ||||| |||
Sbjct: 61 ttcaagaagaacaggaagaagagaggtcacgtcagcgccggacatggacgtatcggtaag 120
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| |||||||| || || ||||| |||||| | ||||||
Sbjct: 121 caccgtaagcatcccggaggtcgtggtaacgctggaggtatgcatcaccacaggatcctc 180
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||| ||||||||||| || |||||||| || ||||| ||| | || ||||| |||||
Sbjct: 181 ttcgaaaagtaccatccaggttacttcggtaaagttggtatgaggtatttccacaagctg 240
Query: 242 cgcaacaagttctactgccc 261
| |||||||||| ||||||
Sbjct: 241 aggaacaagttcttctgccc 260
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 304,473
Number of Sequences: 1013581
Number of extensions: 304473
Number of successful extensions: 25061
Number of sequences better than 0.5: 152
Number of HSP's better than 0.5 without gapping: 153
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 24141
Number of HSP's gapped (non-prelim): 913
length of query: 699
length of database: 908,940,872
effective HSP length: 20
effective length of query: 679
effective length of database: 888,669,252
effective search space: 603406422108
effective search space used: 603406422108
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)