BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2441110.2.1
(643 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB257018.1|CB257018 51-E010797-027-001-E07-T7R MPIZ-ADIS... 123 4e-026
gb|BP562751.2|BP562751 BP562751 RAFL14 Arabidopsis thaliana... 123 4e-026
gb|AY070378.1| Arabidopsis thaliana putative Sar1 GTP bindi... 123 4e-026
gb|AY117363.1| Arabidopsis thaliana putative Sar1 GTP bindi... 123 4e-026
ref|NM_116121.4| Arabidopsis thaliana GTP binding AT3G62560... 123 4e-026
gb|CA781972.1|CA781972 008D07AF Infected Arabidopsis Leaf A... 115 1e-023
gb|CB260783.1|CB260783 65-E9408-012-002-B09-t7r MPIZ-ADIS-0... 115 1e-023
gb|AV552901.1|AV552901 AV552901 Arabidopsis thaliana roots ... 115 1e-023
gb|M95795.1|ATHGTPB Arabidopsis thaliana GTP-binding Sarl p... 115 1e-023
gb|AY072220.1| Arabidopsis thaliana putative GTP-binding pr... 115 1e-023
gb|AY096599.1| Arabidopsis thaliana putative GTP-binding pr... 115 1e-023
gb|AY085815.1| Arabidopsis thaliana clone 1854 mRNA, comple... 115 1e-023
ref|NM_104512.2| Arabidopsis thaliana SAR1 (SECRETION-ASSOC... 115 1e-023
gb|AC069159.8|AC069159 Arabidopsis thaliana chromosome 1 BA... 105 9e-021
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 105 9e-021
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 105 9e-021
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 103 4e-020
gb|BU636578.1|BU636578 008D06 Infected Arabidopsis Leaf Ara... 82 1e-013
gb|AV565941.1|AV565941 AV565941 Arabidopsis thaliana green ... 82 1e-013
gb|BP787073.1|BP787073 BP787073 RAFL7 Arabidopsis thaliana ... 82 1e-013
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 76 8e-012
gb|AC003114.1|T12M4 Arabidopsis thaliana chromosome 1 BAC T... 76 8e-012
gb|AU226742.1|AU226742 AU226742 RAFL14 Arabidopsis thaliana... 74 3e-011
gb|CB257839.1|CB257839 44-E011083-014-003-H12-T7R MPIZ-ADIS... 74 3e-011
gb|BP796332.1|BP796332 BP796332 RAFL5 Arabidopsis thaliana ... 74 3e-011
gb|BP798611.1|BP798611 BP798611 RAFL14 Arabidopsis thaliana... 74 3e-011
gb|BP856044.1|BP856044 BP856044 RAFL21 Arabidopsis thaliana... 74 3e-011
gb|U56929.1|ATU56929 Arabidospis thaliana GTP binding prote... 74 3e-011
gb|AY065357.1| Arabidopsis thaliana putative SAR1/GTP-bindi... 74 3e-011
gb|AY090921.1| Arabidopsis thaliana putative GTP-binding pr... 74 3e-011
gb|AY096699.1| Arabidopsis thaliana putative SAR1/GTP-bindi... 74 3e-011
gb|AY088765.1| Arabidopsis thaliana clone 94610 mRNA, compl... 74 3e-011
emb|BX827737.1|CNS0A32X Arabidopsis thaliana Full-length cD... 74 3e-011
ref|NM_116440.2| Arabidopsis thaliana ASAR1; GTP binding AT... 74 3e-011
ref|NM_100788.3| Arabidopsis thaliana ATSAR1/ATSARA1A; GTP ... 74 3e-011
gb|N37802.1|N37802 19029 Lambda-PRL2 Arabidopsis thaliana c... 72 1e-010
gb|BH810290.1|BH810290 SALK_048796 Arabidopsis thaliana TDN... 70 5e-010
gb|BP566240.1|BP566240 BP566240 RAFL14 Arabidopsis thaliana... 70 5e-010
gb|BP563740.1|BP563740 BP563740 RAFL14 Arabidopsis thaliana... 68 2e-009
gb|BP665675.1|BP665675 BP665675 RAFL21 Arabidopsis thaliana... 68 2e-009
gb|BP663592.1|BP663592 BP663592 RAFL21 Arabidopsis thaliana... 66 8e-009
gb|BP632260.1|BP632260 BP632260 RAFL17 Arabidopsis thaliana... 60 5e-007
gb|BP655222.1|BP655222 BP655222 RAFL19 Arabidopsis thaliana... 60 5e-007
gb|BP807256.1|BP807256 BP807256 RAFL16 Arabidopsis thaliana... 60 5e-007
gb|Z26132.1|Z26132 ATTS1404 Versailles-VC Arabidopsis thali... 60 5e-007
gb|AA597933.1|AA597933 29182 Lambda-PRL2 Arabidopsis thalia... 58 2e-006
gb|AA713305.1|AA713305 32865 Lambda-PRL2 Arabidopsis thalia... 58 2e-006
gb|AI996950.1|AI996950 701551307 A. thaliana, Columbia Col-... 58 2e-006
gb|AV801001.1|AV801001 AV801001 RAFL9 Arabidopsis thaliana ... 58 2e-006
gb|AV804199.1|AV804199 AV804199 RAFL9 Arabidopsis thaliana ... 58 2e-006
gb|CD530117.1|CD530117 39L16 Arabidopsis Leaf Senescence Li... 58 2e-006
gb|CD533898.1|CD533898 34F22 Arabidopsis Leaf Senescence Li... 58 2e-006
gb|AV553155.1|AV553155 AV553155 Arabidopsis thaliana roots ... 58 2e-006
gb|AV562558.1|AV562558 AV562558 Arabidopsis thaliana green ... 58 2e-006
gb|BP567665.1|BP567665 BP567665 RAFL14 Arabidopsis thaliana... 58 2e-006
gb|BP630511.1|BP630511 BP630511 RAFL17 Arabidopsis thaliana... 58 2e-006
gb|BP633728.1|BP633728 BP633728 RAFL17 Arabidopsis thaliana... 58 2e-006
gb|BP642148.1|BP642148 BP642148 RAFL19 Arabidopsis thaliana... 58 2e-006
gb|BP781897.1|BP781897 BP781897 RAFL7 Arabidopsis thaliana ... 58 2e-006
gb|BP784845.1|BP784845 BP784845 RAFL7 Arabidopsis thaliana ... 58 2e-006
gb|BP786263.1|BP786263 BP786263 RAFL7 Arabidopsis thaliana ... 58 2e-006
gb|BP790307.1|BP790307 BP790307 RAFL7 Arabidopsis thaliana ... 58 2e-006
gb|BP792103.1|BP792103 BP792103 RAFL7 Arabidopsis thaliana ... 58 2e-006
gb|BP795052.1|BP795052 BP795052 RAFL7 Arabidopsis thaliana ... 58 2e-006
gb|Z26707.1|Z26707 ATTS1784 Versailles-VC Arabidopsis thali... 58 2e-006
emb|AX461517.1| Sequence 446 from Patent WO0198480 58 2e-006
gb|AF001535.1|ATAF001535 Arabidopsis thaliana chromosome IV... 58 2e-006
emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, shor... 58 2e-006
emb|AL161493.2|ATCHRIV5 Arabidopsis thaliana DNA chromosome... 58 2e-006
gb|AF001308.1|ATAF001308 Arabidopsis thaliana BAC T10M13 fr... 58 2e-006
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 58 2e-006
gb|BP862893.1|BP862893 BP862893 RAFL21 Arabidopsis thaliana... 56 8e-006
gb|BU636415.1|BU636415 051H06 Infected Arabidopsis Leaf Ara... 54 3e-005
gb|CB255669.1|CB255669 27-E010904-027-001-E07-T7R MPIZ-ADIS... 54 3e-005
gb|BP580566.1|BP580566 BP580566 RAFL14 Arabidopsis thaliana... 54 3e-005
gb|BP648007.1|BP648007 BP648007 RAFL19 Arabidopsis thaliana... 54 3e-005
gb|BP831232.1|BP831232 BP831232 RAFL19 Arabidopsis thaliana... 54 3e-005
gb|BP860874.1|BP860874 BP860874 RAFL21 Arabidopsis thaliana... 54 3e-005
gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BA... 54 3e-005
ref|NM_100142.2| Arabidopsis thaliana GTP binding AT1G02620... 54 3e-005
gb|AA395856.1|AA395856 25844 Lambda-PRL2 Arabidopsis thalia... 52 1e-004
gb|T04723.1|T04723 770 Lambda-PRL2 Arabidopsis thaliana cDN... 52 1e-004
gb|AV824463.1|AV824463 AV824463 RAFL6 Arabidopsis thaliana ... 52 1e-004
gb|BP811424.1|BP811424 BP811424 RAFL16 Arabidopsis thaliana... 52 1e-004
gb|BP859844.1|BP859844 BP859844 RAFL21 Arabidopsis thaliana... 52 1e-004
gb|AV812558.1|AV812558 AV812558 RAFL9 Arabidopsis thaliana ... 50 5e-004
gb|BP589547.1|BP589547 BP589547 RAFL15 Arabidopsis thaliana... 50 5e-004
gb|BP597403.1|BP597403 BP597403 RAFL15 Arabidopsis thaliana... 50 5e-004
gb|BP602497.1|BP602497 BP602497 RAFL16 Arabidopsis thaliana... 50 5e-004
gb|BP605301.1|BP605301 BP605301 RAFL16 Arabidopsis thaliana... 50 5e-004
gb|BP624260.1|BP624260 BP624260 RAFL17 Arabidopsis thaliana... 50 5e-004
gb|BP634908.1|BP634908 BP634908 RAFL17 Arabidopsis thaliana... 50 5e-004
gb|BP670331.1|BP670331 BP670331 RAFL21 Arabidopsis thaliana... 50 5e-004
gb|AI998662.1|AI998662 701546483 A. thaliana, Columbia Col-... 48 0.002
gb|AV814313.1|AV814313 AV814313 RAFL9 Arabidopsis thaliana ... 48 0.002
gb|CB261903.1|CB261903 82-E8879-008-014-C22-pBl2 MPIZ-ADIS-... 48 0.002
gb|AV543560.1|AV543560 AV543560 Arabidopsis thaliana roots ... 48 0.002
gb|BP577556.1|BP577556 BP577556 RAFL14 Arabidopsis thaliana... 48 0.002
gb|BP597152.1|BP597152 BP597152 RAFL15 Arabidopsis thaliana... 48 0.002
gb|BP629366.1|BP629366 BP629366 RAFL17 Arabidopsis thaliana... 48 0.002
gb|BP630184.1|BP630184 BP630184 RAFL17 Arabidopsis thaliana... 48 0.002
gb|BP638874.1|BP638874 BP638874 RAFL19 Arabidopsis thaliana... 48 0.002
gb|BP788428.1|BP788428 BP788428 RAFL7 Arabidopsis thaliana ... 48 0.002
gb|BP829563.1|BP829563 BP829563 RAFL19 Arabidopsis thaliana... 48 0.002
gb|BP833088.1|BP833088 BP833088 RAFL19 Arabidopsis thaliana... 48 0.002
gb|BZ595490.1|BZ595490 SALK_087289.39.75.x Arabidopsis thal... 46 0.007
gb|Z29057.1|Z29057 ATTS2070 Ors-A Arabidopsis thaliana cDNA... 46 0.007
gb|BP592345.1|BP592345 BP592345 RAFL15 Arabidopsis thaliana... 46 0.007
gb|BP622688.1|BP622688 BP622688 RAFL17 Arabidopsis thaliana... 46 0.007
gb|BP661521.1|BP661521 BP661521 RAFL21 Arabidopsis thaliana... 46 0.007
gb|BP838529.1|BP838529 BP838529 RAFL19 Arabidopsis thaliana... 46 0.007
gb|BP865412.1|BP865412 BP865412 RAFL21 Arabidopsis thaliana... 46 0.007
emb|BX841951.1|CNS09Y4S Arabidopsis thaliana Full-length cD... 46 0.007
gb|BP572172.1|BP572172 BP572172 RAFL14 Arabidopsis thaliana... 44 0.029
gb|BP605925.1|BP605925 BP605925 RAFL16 Arabidopsis thaliana... 44 0.029
gb|BP665560.1|BP665560 BP665560 RAFL21 Arabidopsis thaliana... 44 0.029
gb|BP824789.1|BP824789 BP824789 RAFL19 Arabidopsis thaliana... 44 0.029
gb|BP837618.1|BP837618 BP837618 RAFL19 Arabidopsis thaliana... 44 0.029
gb|BP841938.1|BP841938 BP841938 RAFL21 Arabidopsis thaliana... 44 0.029
gb|T22678.1|T22678 4686 Lambda-PRL2 Arabidopsis thaliana cD... 42 0.12
gb|R90183.1|R90183 16538 Lambda-PRL2 Arabidopsis thaliana c... 42 0.12
gb|CB257019.1|CB257019 51-E010846-027-001-E07-spP1 MPIZ-ADI... 42 0.12
gb|BP842883.1|BP842883 BP842883 RAFL21 Arabidopsis thaliana... 42 0.12
gb|BP857027.1|BP857027 BP857027 RAFL21 Arabidopsis thaliana... 42 0.12
emb|AL943718.1| Arabidopsis thaliana T-DNA flanking sequenc... 40 0.46
gb|CW839846.1|CW839846 GT8990.Ds3.11.07.2002.jw72.577 Arabi... 40 0.46
gb|CZ559781.1|CZ559781 GT8990.Ds3+AD1.06.07.2005.naomi.1139... 40 0.46
gb|H37623.1|H37623 15752 Lambda-PRL2 Arabidopsis thaliana c... 40 0.46
gb|AV786240.1|AV786240 AV786240 RAFL6 Arabidopsis thaliana ... 40 0.46
gb|BP568948.1|BP568948 BP568948 RAFL14 Arabidopsis thaliana... 40 0.46
gb|BP610173.1|BP610173 BP610173 RAFL16 Arabidopsis thaliana... 40 0.46
gb|BP611498.1|BP611498 BP611498 RAFL16 Arabidopsis thaliana... 40 0.46
gb|BP623732.1|BP623732 BP623732 RAFL17 Arabidopsis thaliana... 40 0.46
gb|BP626257.1|BP626257 BP626257 RAFL17 Arabidopsis thaliana... 40 0.46
gb|BP629609.1|BP629609 BP629609 RAFL17 Arabidopsis thaliana... 40 0.46
gb|BP657937.1|BP657937 BP657937 RAFL19 Arabidopsis thaliana... 40 0.46
gb|BP799111.1|BP799111 BP799111 RAFL14 Arabidopsis thaliana... 40 0.46
gb|AF184839.1|AF184839 Arabidopsis thaliana inhibitor tagge... 40 0.46
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 40 0.46
emb|AL391716.1|ATF21E1 Arabidopsis thaliana DNA chromosome ... 40 0.46
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 40 0.46
>gb|CB257018.1|CB257018 51-E010797-027-001-E07-T7R MPIZ-ADIS-027 Arabidopsis thaliana cDNA
clone MPIZp772E071Q 5-PRIME, mRNA sequence
Length = 628
Score = 123 bits (62), Expect = 4e-026
Identities = 170/206 (82%)
Strand = Plus / Minus
Query: 435 aggcctaggtgataccgcagctcctcttcagaggcagcatacgggatatcaatcttgttg 494
|||||||| ||||| |||||||| ||||| || ||||| ||||| || || || |||||
Sbjct: 324 aggcctagatgataacgcagctcgtcttctgatgcagcgtacggaatgtcgattttgttt 265
Query: 495 ccaaggatgagaaatggaacatttgccaaggaatcatctgacaggagagcgtccagctcc 554
||||||||||| || || |||||||| | ||| ||||| || || |||||||| |||||
Sbjct: 264 ccaaggatgaggaaagggacatttgctagggattcatcagagagaagagcgtcaagctct 205
Query: 555 ttttttgattcagcaaatcgctccttatcatacgcatctaccaggtatactacagcatca 614
|| |||||||| ||||| | ||| || ||||| ||||| || |||||||| || ||||||
Sbjct: 204 ttctttgattctgcaaacctctctttgtcatatgcatcaactaggtataccactgcatca 145
Query: 615 acctttgcgtagtaatccttccagac 640
||||| ||||| || |||||||||||
Sbjct: 144 accttagcgtaatagtccttccagac 119
>gb|BP562751.2|BP562751 BP562751 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-55-C04 5',
mRNA sequence
Length = 589
Score = 123 bits (62), Expect = 4e-026
Identities = 170/206 (82%)
Strand = Plus / Minus
Query: 435 aggcctaggtgataccgcagctcctcttcagaggcagcatacgggatatcaatcttgttg 494
|||||||| ||||| |||||||| ||||| || ||||| ||||| || || || |||||
Sbjct: 504 aggcctagatgataacgcagctcgtcttctgatgcagcgtacggaatgtcgattttgttt 445
Query: 495 ccaaggatgagaaatggaacatttgccaaggaatcatctgacaggagagcgtccagctcc 554
||||||||||| || || |||||||| | ||| ||||| || || |||||||| |||||
Sbjct: 444 ccaaggatgaggaaagggacatttgctagggattcatcagagagaagagcgtcaagctct 385
Query: 555 ttttttgattcagcaaatcgctccttatcatacgcatctaccaggtatactacagcatca 614
|| |||||||| ||||| | ||| || ||||| ||||| || |||||||| || ||||||
Sbjct: 384 ttctttgattctgcaaacctctctttgtcatatgcatcaactaggtataccactgcatca 325
Query: 615 acctttgcgtagtaatccttccagac 640
||||| ||||| || |||||||||||
Sbjct: 324 accttagcgtaatagtccttccagac 299
>gb|AY070378.1| Arabidopsis thaliana putative Sar1 GTP binding protein (At3g62560)
mRNA, complete cds
Length = 795
Score = 123 bits (62), Expect = 4e-026
Identities = 170/206 (82%)
Strand = Plus / Minus
Query: 435 aggcctaggtgataccgcagctcctcttcagaggcagcatacgggatatcaatcttgttg 494
|||||||| ||||| |||||||| ||||| || ||||| ||||| || || || |||||
Sbjct: 499 aggcctagatgataacgcagctcgtcttctgatgcagcgtacggaatgtcgattttgttt 440
Query: 495 ccaaggatgagaaatggaacatttgccaaggaatcatctgacaggagagcgtccagctcc 554
||||||||||| || || |||||||| | ||| ||||| || || |||||||| |||||
Sbjct: 439 ccaaggatgaggaaagggacatttgctagggattcatcagagagaagagcgtcaagctct 380
Query: 555 ttttttgattcagcaaatcgctccttatcatacgcatctaccaggtatactacagcatca 614
|| |||||||| ||||| | ||| || ||||| ||||| || |||||||| || ||||||
Sbjct: 379 ttctttgattctgcaaacctctctttgtcatatgcatcaactaggtataccactgcatca 320
Query: 615 acctttgcgtagtaatccttccagac 640
||||| ||||| || |||||||||||
Sbjct: 319 accttagcgtaatagtccttccagac 294
>gb|AY117363.1| Arabidopsis thaliana putative Sar1 GTP binding protein (At3g62560)
mRNA, complete cds
Length = 613
Score = 123 bits (62), Expect = 4e-026
Identities = 170/206 (82%)
Strand = Plus / Minus
Query: 435 aggcctaggtgataccgcagctcctcttcagaggcagcatacgggatatcaatcttgttg 494
|||||||| ||||| |||||||| ||||| || ||||| ||||| || || || |||||
Sbjct: 443 aggcctagatgataacgcagctcgtcttctgatgcagcgtacggaatgtcgattttgttt 384
Query: 495 ccaaggatgagaaatggaacatttgccaaggaatcatctgacaggagagcgtccagctcc 554
||||||||||| || || |||||||| | ||| ||||| || || |||||||| |||||
Sbjct: 383 ccaaggatgaggaaagggacatttgctagggattcatcagagagaagagcgtcaagctct 324
Query: 555 ttttttgattcagcaaatcgctccttatcatacgcatctaccaggtatactacagcatca 614
|| |||||||| ||||| | ||| || ||||| ||||| || |||||||| || ||||||
Sbjct: 323 ttctttgattctgcaaacctctctttgtcatatgcatcaactaggtataccactgcatca 264
Query: 615 acctttgcgtagtaatccttccagac 640
||||| ||||| || |||||||||||
Sbjct: 263 accttagcgtaatagtccttccagac 238
>ref|NM_116121.4| Arabidopsis thaliana GTP binding AT3G62560 mRNA, complete cds
Length = 803
Score = 123 bits (62), Expect = 4e-026
Identities = 170/206 (82%)
Strand = Plus / Minus
Query: 435 aggcctaggtgataccgcagctcctcttcagaggcagcatacgggatatcaatcttgttg 494
|||||||| ||||| |||||||| ||||| || ||||| ||||| || || || |||||
Sbjct: 499 aggcctagatgataacgcagctcgtcttctgatgcagcgtacggaatgtcgattttgttt 440
Query: 495 ccaaggatgagaaatggaacatttgccaaggaatcatctgacaggagagcgtccagctcc 554
||||||||||| || || |||||||| | ||| ||||| || || |||||||| |||||
Sbjct: 439 ccaaggatgaggaaagggacatttgctagggattcatcagagagaagagcgtcaagctct 380
Query: 555 ttttttgattcagcaaatcgctccttatcatacgcatctaccaggtatactacagcatca 614
|| |||||||| ||||| | ||| || ||||| ||||| || |||||||| || ||||||
Sbjct: 379 ttctttgattctgcaaacctctctttgtcatatgcatcaactaggtataccactgcatca 320
Query: 615 acctttgcgtagtaatccttccagac 640
||||| ||||| || |||||||||||
Sbjct: 319 accttagcgtaatagtccttccagac 294
>gb|CA781972.1|CA781972 008D07AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 783
Score = 115 bits (58), Expect = 1e-023
Identities = 268/338 (79%)
Strand = Plus / Minus
Query: 300 ttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaacactg 359
|||||||| || |||| ||| ||||| || ||||| || ||||| || || |||| |||
Sbjct: 636 ttgatgtactgagagagccatttgaatccctcgccataacccattttacggacaatgctg 577
Query: 360 cacatgaaaacctcaagtggccggacattggagtcgccaaggttgaccttgcccttcccg 419
|||||||| ||||||||||| || ||| ||||| || || | || |||||||| |||
Sbjct: 576 cacatgaagacctcaagtgggcgaacaccagagtctccgagcgtcactttgcccttaccg 517
Query: 420 gttgtgaagttgctaaggcctaggtgataccgcagctcctcttcagaggcagcatacggg 479
|| |||||||| | || || | |||||||| ||| || |||||||| || ||||| |||
Sbjct: 516 gtggtgaagttagtgagacccaagtgatacctcagttcgtcttcagaagctgcataaggg 457
Query: 480 atatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaatcatctgacagg 539
|||||||||||||| ||||| || ||||| || ||| |||| | || ||||| || ||
Sbjct: 456 atatcaatcttgttcccaagaatcagaaacgggacagttgcaagggcttcatccgagaga 397
Query: 540 agagcgtccagctccttttttgattcagcaaatcgctccttatcatacgcatctaccagg 599
||||| || ||||| ||||||| || ||||||| || || ||||| ||||| || |||
Sbjct: 396 agagcatcaagctctctttttgactctgcaaatctttctttgtcataagcatccacaagg 337
Query: 600 tatactacagcatcaacctttgcgtagtaatccttcca 637
|| || |||||||||||||| || |||||||| |||||
Sbjct: 336 tagacaacagcatcaaccttggcatagtaatctttcca 299
>gb|CB260783.1|CB260783 65-E9408-012-002-B09-t7r MPIZ-ADIS-012 Arabidopsis thaliana cDNA
clone MPIZp769B092Q 5-PRIME, mRNA sequence
Length = 653
Score = 115 bits (58), Expect = 1e-023
Identities = 268/338 (79%)
Strand = Plus / Minus
Query: 300 ttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaacactg 359
|||||||| || |||| ||| ||||| || ||||| || ||||| || || |||| |||
Sbjct: 634 ttgatgtactgagagagccatttgaatccctcgccataacccattttacggacaatgctg 575
Query: 360 cacatgaaaacctcaagtggccggacattggagtcgccaaggttgaccttgcccttcccg 419
|||||||| ||||||||||| || ||| ||||| || || | || |||||||| |||
Sbjct: 574 cacatgaagacctcaagtgggcgaacaccagagtctccgagcgtcactttgcccttaccg 515
Query: 420 gttgtgaagttgctaaggcctaggtgataccgcagctcctcttcagaggcagcatacggg 479
|| |||||||| | || || | |||||||| ||| || |||||||| || ||||| |||
Sbjct: 514 gtggtgaagttagtgagacccaagtgatacctcagttcgtcttcagaagctgcataaggg 455
Query: 480 atatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaatcatctgacagg 539
|||||||||||||| ||||| || ||||| || ||| |||| | || ||||| || ||
Sbjct: 454 atatcaatcttgttcccaagaatcagaaacgggacagttgcaagggcttcatccgagaga 395
Query: 540 agagcgtccagctccttttttgattcagcaaatcgctccttatcatacgcatctaccagg 599
||||| || ||||| ||||||| || ||||||| || || ||||| ||||| || |||
Sbjct: 394 agagcatcaagctctctttttgactctgcaaatctttctttgtcataagcatccacaagg 335
Query: 600 tatactacagcatcaacctttgcgtagtaatccttcca 637
|| || |||||||||||||| || |||||||| |||||
Sbjct: 334 tagacaacagcatcaaccttggcatagtaatctttcca 297
>gb|AV552901.1|AV552901 AV552901 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ48d11R 5', mRNA sequence
Length = 572
Score = 115 bits (58), Expect = 1e-023
Identities = 268/338 (79%)
Strand = Plus / Minus
Query: 300 ttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaacactg 359
|||||||| || |||| ||| ||||| || ||||| || ||||| || || |||| |||
Sbjct: 556 ttgatgtactgagagagccatttgaatccctcgccataacccattttacggacaatgctg 497
Query: 360 cacatgaaaacctcaagtggccggacattggagtcgccaaggttgaccttgcccttcccg 419
|||||||| ||||||||||| || ||| ||||| || || | || |||||||| |||
Sbjct: 496 cacatgaagacctcaagtgggcgaacaccagagtctccgagcgtcactttgcccttaccg 437
Query: 420 gttgtgaagttgctaaggcctaggtgataccgcagctcctcttcagaggcagcatacggg 479
|| |||||||| | || || | |||||||| ||| || |||||||| || ||||| |||
Sbjct: 436 gtggtgaagttagtgagacccaagtgatacctcagttcgtcttcagaagctgcataaggg 377
Query: 480 atatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaatcatctgacagg 539
|||||||||||||| ||||| || ||||| || ||| |||| | || ||||| || ||
Sbjct: 376 atatcaatcttgttcccaagaatcagaaacgggacagttgcaagggcttcatccgagaga 317
Query: 540 agagcgtccagctccttttttgattcagcaaatcgctccttatcatacgcatctaccagg 599
||||| || ||||| ||||||| || ||||||| || || ||||| ||||| || |||
Sbjct: 316 agagcatcaagctctctttttgactctgcaaatctttctttgtcataagcatccacaagg 257
Query: 600 tatactacagcatcaacctttgcgtagtaatccttcca 637
|| || |||||||||||||| || |||||||| |||||
Sbjct: 256 tagacaacagcatcaaccttggcatagtaatctttcca 219
>gb|M95795.1|ATHGTPB Arabidopsis thaliana GTP-binding Sarl protein mRNA, complete cds
Length = 905
Score = 115 bits (58), Expect = 1e-023
Identities = 268/338 (79%)
Strand = Plus / Minus
Query: 300 ttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaacactg 359
|||||||| || |||| ||| ||||| || ||||| || ||||| || || |||| |||
Sbjct: 637 ttgatgtactgagagagccatttgaatccctcgccataacccattttacggacaatgctg 578
Query: 360 cacatgaaaacctcaagtggccggacattggagtcgccaaggttgaccttgcccttcccg 419
|||||||| ||||||||||| || ||| ||||| || || | || |||||||| |||
Sbjct: 577 cacatgaagacctcaagtgggcgaacaccagagtctccgagcgtcactttgcccttaccg 518
Query: 420 gttgtgaagttgctaaggcctaggtgataccgcagctcctcttcagaggcagcatacggg 479
|| |||||||| | || || | |||||||| ||| || |||||||| || ||||| |||
Sbjct: 517 gtggtgaagttagtgagacccaagtgatacctcagttcgtcttcagaagctgcataaggg 458
Query: 480 atatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaatcatctgacagg 539
|||||||||||||| ||||| || ||||| || ||| |||| | || ||||| || ||
Sbjct: 457 atatcaatcttgttcccaagaatcagaaacgggacagttgcaagggcttcatccgagaga 398
Query: 540 agagcgtccagctccttttttgattcagcaaatcgctccttatcatacgcatctaccagg 599
||||| || ||||| ||||||| || ||||||| || || ||||| ||||| || |||
Sbjct: 397 agagcatcaagctctctttttgactctgcaaatctttctttgtcataagcatccacaagg 338
Query: 600 tatactacagcatcaacctttgcgtagtaatccttcca 637
|| || |||||||||||||| || |||||||| |||||
Sbjct: 337 tagacaacagcatcaaccttggcatagtaatctttcca 300
>gb|AY072220.1| Arabidopsis thaliana putative GTP-binding protein SAR1B (At1g56330)
mRNA, complete cds
Length = 950
Score = 115 bits (58), Expect = 1e-023
Identities = 268/338 (79%)
Strand = Plus / Minus
Query: 300 ttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaacactg 359
|||||||| || |||| ||| ||||| || ||||| || ||||| || || |||| |||
Sbjct: 643 ttgatgtactgagagagccatttgaatccctcgccataacccattttacggacaatgctg 584
Query: 360 cacatgaaaacctcaagtggccggacattggagtcgccaaggttgaccttgcccttcccg 419
|||||||| ||||||||||| || ||| ||||| || || | || |||||||| |||
Sbjct: 583 cacatgaagacctcaagtgggcgaacaccagagtctccgagcgtcactttgcccttaccg 524
Query: 420 gttgtgaagttgctaaggcctaggtgataccgcagctcctcttcagaggcagcatacggg 479
|| |||||||| | || || | |||||||| ||| || |||||||| || ||||| |||
Sbjct: 523 gtggtgaagttagtgagacccaagtgatacctcagttcgtcttcagaagctgcataaggg 464
Query: 480 atatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaatcatctgacagg 539
|||||||||||||| ||||| || ||||| || ||| |||| | || ||||| || ||
Sbjct: 463 atatcaatcttgttcccaagaatcagaaacgggacagttgcaagggcttcatccgagaga 404
Query: 540 agagcgtccagctccttttttgattcagcaaatcgctccttatcatacgcatctaccagg 599
||||| || ||||| ||||||| || ||||||| || || ||||| ||||| || |||
Sbjct: 403 agagcatcaagctctctttttgactctgcaaatctttctttgtcataagcatccacaagg 344
Query: 600 tatactacagcatcaacctttgcgtagtaatccttcca 637
|| || |||||||||||||| || |||||||| |||||
Sbjct: 343 tagacaacagcatcaaccttggcatagtaatctttcca 306
>gb|AY096599.1| Arabidopsis thaliana putative GTP-binding protein SAR1B (At1g56330)
mRNA, complete cds
Length = 613
Score = 115 bits (58), Expect = 1e-023
Identities = 268/338 (79%)
Strand = Plus / Minus
Query: 300 ttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaacactg 359
|||||||| || |||| ||| ||||| || ||||| || ||||| || || |||| |||
Sbjct: 578 ttgatgtactgagagagccatttgaatccctcgccataacccattttacggacaatgctg 519
Query: 360 cacatgaaaacctcaagtggccggacattggagtcgccaaggttgaccttgcccttcccg 419
|||||||| ||||||||||| || ||| ||||| || || | || |||||||| |||
Sbjct: 518 cacatgaagacctcaagtgggcgaacaccagagtctccgagcgtcactttgcccttaccg 459
Query: 420 gttgtgaagttgctaaggcctaggtgataccgcagctcctcttcagaggcagcatacggg 479
|| |||||||| | || || | |||||||| ||| || |||||||| || ||||| |||
Sbjct: 458 gtggtgaagttagtgagacccaagtgatacctcagttcgtcttcagaagctgcataaggg 399
Query: 480 atatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaatcatctgacagg 539
|||||||||||||| ||||| || ||||| || ||| |||| | || ||||| || ||
Sbjct: 398 atatcaatcttgttcccaagaatcagaaacgggacagttgcaagggcttcatccgagaga 339
Query: 540 agagcgtccagctccttttttgattcagcaaatcgctccttatcatacgcatctaccagg 599
||||| || ||||| ||||||| || ||||||| || || ||||| ||||| || |||
Sbjct: 338 agagcatcaagctctctttttgactctgcaaatctttctttgtcataagcatccacaagg 279
Query: 600 tatactacagcatcaacctttgcgtagtaatccttcca 637
|| || |||||||||||||| || |||||||| |||||
Sbjct: 278 tagacaacagcatcaaccttggcatagtaatctttcca 241
>gb|AY085815.1| Arabidopsis thaliana clone 1854 mRNA, complete sequence
Length = 904
Score = 115 bits (58), Expect = 1e-023
Identities = 268/338 (79%)
Strand = Plus / Minus
Query: 300 ttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaacactg 359
|||||||| || |||| ||| ||||| || ||||| || ||||| || || |||| |||
Sbjct: 649 ttgatgtactgagagagccatttgaatccctcgccataacccattttacggacaatgctg 590
Query: 360 cacatgaaaacctcaagtggccggacattggagtcgccaaggttgaccttgcccttcccg 419
|||||||| ||||||||||| || ||| ||||| || || | || |||||||| |||
Sbjct: 589 cacatgaagacctcaagtgggcgaacaccagagtctccgagcgtcactttgcccttaccg 530
Query: 420 gttgtgaagttgctaaggcctaggtgataccgcagctcctcttcagaggcagcatacggg 479
|| |||||||| | || || | |||||||| ||| || |||||||| || ||||| |||
Sbjct: 529 gtggtgaagttagtgagacccaagtgatacctcagttcgtcttcagaagctgcataaggg 470
Query: 480 atatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaatcatctgacagg 539
|||||||||||||| ||||| || ||||| || ||| |||| | || ||||| || ||
Sbjct: 469 atatcaatcttgttcccaagaatcagaaacgggacagttgcaagggcttcatccgagaga 410
Query: 540 agagcgtccagctccttttttgattcagcaaatcgctccttatcatacgcatctaccagg 599
||||| || ||||| ||||||| || ||||||| || || ||||| ||||| || |||
Sbjct: 409 agagcatcaagctctctttttgactctgcaaatctttctttgtcataagcatccacaagg 350
Query: 600 tatactacagcatcaacctttgcgtagtaatccttcca 637
|| || |||||||||||||| || |||||||| |||||
Sbjct: 349 tagacaacagcatcaaccttggcatagtaatctttcca 312
>ref|NM_104512.2| Arabidopsis thaliana SAR1 (SECRETION-ASSOCIATED RAS); GTP binding
AT1G56330 (SAR1) mRNA, complete cds
Length = 943
Score = 115 bits (58), Expect = 1e-023
Identities = 268/338 (79%)
Strand = Plus / Minus
Query: 300 ttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaacactg 359
|||||||| || |||| ||| ||||| || ||||| || ||||| || || |||| |||
Sbjct: 649 ttgatgtactgagagagccatttgaatccctcgccataacccattttacggacaatgctg 590
Query: 360 cacatgaaaacctcaagtggccggacattggagtcgccaaggttgaccttgcccttcccg 419
|||||||| ||||||||||| || ||| ||||| || || | || |||||||| |||
Sbjct: 589 cacatgaagacctcaagtgggcgaacaccagagtctccgagcgtcactttgcccttaccg 530
Query: 420 gttgtgaagttgctaaggcctaggtgataccgcagctcctcttcagaggcagcatacggg 479
|| |||||||| | || || | |||||||| ||| || |||||||| || ||||| |||
Sbjct: 529 gtggtgaagttagtgagacccaagtgatacctcagttcgtcttcagaagctgcataaggg 470
Query: 480 atatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaatcatctgacagg 539
|||||||||||||| ||||| || ||||| || ||| |||| | || ||||| || ||
Sbjct: 469 atatcaatcttgttcccaagaatcagaaacgggacagttgcaagggcttcatccgagaga 410
Query: 540 agagcgtccagctccttttttgattcagcaaatcgctccttatcatacgcatctaccagg 599
||||| || ||||| ||||||| || ||||||| || || ||||| ||||| || |||
Sbjct: 409 agagcatcaagctctctttttgactctgcaaatctttctttgtcataagcatccacaagg 350
Query: 600 tatactacagcatcaacctttgcgtagtaatccttcca 637
|| || |||||||||||||| || |||||||| |||||
Sbjct: 349 tagacaacagcatcaaccttggcatagtaatctttcca 312
>gb|AC069159.8|AC069159 Arabidopsis thaliana chromosome 1 BAC F14G9 genomic sequence, complete
sequence
Length = 111481
Score = 105 bits (53), Expect = 9e-021
Identities = 254/321 (79%)
Strand = Plus / Minus
Query: 300 ttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaacactg 359
|||||||| || |||| ||| ||||| || ||||| || ||||| || || |||| |||
Sbjct: 21369 ttgatgtactgagagagccatttgaatccctcgccataacccattttacggacaatgctg 21310
Query: 360 cacatgaaaacctcaagtggccggacattggagtcgccaaggttgaccttgcccttcccg 419
|||||||| ||||||||||| || ||| ||||| || || | || |||||||| |||
Sbjct: 21309 cacatgaagacctcaagtgggcgaacaccagagtctccgagcgtcactttgcccttaccg 21250
Query: 420 gttgtgaagttgctaaggcctaggtgataccgcagctcctcttcagaggcagcatacggg 479
|| |||||||| | || || | |||||||| ||| || |||||||| || ||||| |||
Sbjct: 21249 gtggtgaagttagtgagacccaagtgatacctcagttcgtcttcagaagctgcataaggg 21190
Query: 480 atatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaatcatctgacagg 539
|||||||||||||| ||||| || ||||| || ||| |||| | || ||||| || ||
Sbjct: 21189 atatcaatcttgttcccaagaatcagaaacgggacagttgcaagggcttcatccgagaga 21130
Query: 540 agagcgtccagctccttttttgattcagcaaatcgctccttatcatacgcatctaccagg 599
||||| || ||||| ||||||| || ||||||| || || ||||| ||||| || |||
Sbjct: 21129 agagcatcaagctctctttttgactctgcaaatctttctttgtcataagcatccacaagg 21070
Query: 600 tatactacagcatcaaccttt 620
|| || |||||||||||||||
Sbjct: 21069 tagacaacagcatcaaccttt 21049
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 105 bits (53), Expect = 9e-021
Identities = 254/321 (79%)
Strand = Plus / Plus
Query: 300 ttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaacactg 359
|||||||| || |||| ||| ||||| || ||||| || ||||| || || |||| |||
Sbjct: 5446290 ttgatgtactgagagagccatttgaatccctcgccataacccattttacggacaatgctg 5446349
Query: 360 cacatgaaaacctcaagtggccggacattggagtcgccaaggttgaccttgcccttcccg 419
|||||||| ||||||||||| || ||| ||||| || || | || |||||||| |||
Sbjct: 5446350 cacatgaagacctcaagtgggcgaacaccagagtctccgagcgtcactttgcccttaccg 5446409
Query: 420 gttgtgaagttgctaaggcctaggtgataccgcagctcctcttcagaggcagcatacggg 479
|| |||||||| | || || | |||||||| ||| || |||||||| || ||||| |||
Sbjct: 5446410 gtggtgaagttagtgagacccaagtgatacctcagttcgtcttcagaagctgcataaggg 5446469
Query: 480 atatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaatcatctgacagg 539
|||||||||||||| ||||| || ||||| || ||| |||| | || ||||| || ||
Sbjct: 5446470 atatcaatcttgttcccaagaatcagaaacgggacagttgcaagggcttcatccgagaga 5446529
Query: 540 agagcgtccagctccttttttgattcagcaaatcgctccttatcatacgcatctaccagg 599
||||| || ||||| ||||||| || ||||||| || || ||||| ||||| || |||
Sbjct: 5446530 agagcatcaagctctctttttgactctgcaaatctttctttgtcataagcatccacaagg 5446589
Query: 600 tatactacagcatcaaccttt 620
|| || |||||||||||||||
Sbjct: 5446590 tagacaacagcatcaaccttt 5446610
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 105 bits (53), Expect = 9e-021
Identities = 254/321 (79%)
Strand = Plus / Plus
Query: 300 ttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaacactg 359
|||||||| || |||| ||| ||||| || ||||| || ||||| || || |||| |||
Sbjct: 21090514 ttgatgtactgagagagccatttgaatccctcgccataacccattttacggacaatgctg 21090573
Query: 360 cacatgaaaacctcaagtggccggacattggagtcgccaaggttgaccttgcccttcccg 419
|||||||| ||||||||||| || ||| ||||| || || | || |||||||| |||
Sbjct: 21090574 cacatgaagacctcaagtgggcgaacaccagagtctccgagcgtcactttgcccttaccg 21090633
Query: 420 gttgtgaagttgctaaggcctaggtgataccgcagctcctcttcagaggcagcatacggg 479
|| |||||||| | || || | |||||||| ||| || |||||||| || ||||| |||
Sbjct: 21090634 gtggtgaagttagtgagacccaagtgatacctcagttcgtcttcagaagctgcataaggg 21090693
Query: 480 atatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaatcatctgacagg 539
|||||||||||||| ||||| || ||||| || ||| |||| | || ||||| || ||
Sbjct: 21090694 atatcaatcttgttcccaagaatcagaaacgggacagttgcaagggcttcatccgagaga 21090753
Query: 540 agagcgtccagctccttttttgattcagcaaatcgctccttatcatacgcatctaccagg 599
||||| || ||||| ||||||| || ||||||| || || ||||| ||||| || |||
Sbjct: 21090754 agagcatcaagctctctttttgactctgcaaatctttctttgtcataagcatccacaagg 21090813
Query: 600 tatactacagcatcaaccttt 620
|| || |||||||||||||||
Sbjct: 21090814 tagacaacagcatcaaccttt 21090834
Score = 75.8 bits (38), Expect = 8e-012
Identities = 254/326 (77%)
Strand = Plus / Minus
Query: 295 cctacttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaa 354
|||||||||| || || || | ||| || ||||| ||||| || ||||| ||||| || |
Sbjct: 2965944 cctacttgatatactgagatagccatttaaaaccctcgccataacccattttgcggacga 2965885
Query: 355 cactgcacatgaaaacctcaagtggccggacattggagtcgccaaggttgaccttgccct 414
||||||||||| |||||||| || || ||| ||||| |||| || || |||| |
Sbjct: 2965884 tgctgcacatgaagacctcaaggggacgaacaccagagtcttcaagattcactatgcctt 2965825
Query: 415 tcccggttgtgaagttgctaaggcctaggtgataccgcagctcctcttcagaggcagcat 474
| ||||| ||||| ||| | || |||| || ||||| ||||| ||||| |||| ||||
Sbjct: 2965824 taccggtagtgaaattggtgagacctaagtaatacctaagctcatcttctgaggatgcat 2965765
Query: 475 acgggatatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaatcatctg 534
| || |||||||||||||||||||| || ||| | ||||||||||| |||| |||||||
Sbjct: 2965764 aaggtatatcaatcttgttgccaagaataagacagggaacatttgctaaggcttcatctg 2965705
Query: 535 acaggagagcgtccagctccttttttgattcagcaaatcgctccttatcatacgcatcta 594
| | |||||||| ||||| |||| || || |||||| ||| | || || ||||| |
Sbjct: 2965704 ataaaagagcgtctagctctcttttcgactccacaaatctatccctgtcgtaagcatcca 2965645
Query: 595 ccaggtatactacagcatcaaccttt 620
| ||||| || |||||||||||||||
Sbjct: 2965644 ctaggtagacaacagcatcaaccttt 2965619
Score = 54.0 bits (27), Expect = 3e-005
Identities = 96/119 (80%)
Strand = Plus / Minus
Query: 500 gatgagaaatggaacatttgccaaggaatcatctgacaggagagcgtccagctccttttt 559
|||||| ||||| ||| | || ||||| || ||||| || || || || |||||||||||
Sbjct: 557464 gatgaggaatgggacagtggctaaggattcgtctgagagaagtgcatcaagctccttttt 557405
Query: 560 tgattcagcaaatcgctccttatcatacgcatctaccaggtatactacagcatcaacct 618
|||||| ||||||| ||||| ||||| ||||| || | ||| || | |||||||||||
Sbjct: 557404 tgattctgcaaatctctcctggtcataagcatccactaagtagaccagagcatcaacct 557346
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 103 bits (52), Expect = 4e-020
Identities = 151/184 (82%)
Strand = Plus / Minus
Query: 435 aggcctaggtgataccgcagctcctcttcagaggcagcatacgggatatcaatcttgttg 494
|||||||| ||||| |||||||| ||||| || ||||| ||||| || || || |||||
Sbjct: 23149717 aggcctagatgataacgcagctcgtcttctgatgcagcgtacggaatgtcgattttgttt 23149658
Query: 495 ccaaggatgagaaatggaacatttgccaaggaatcatctgacaggagagcgtccagctcc 554
||||||||||| || || |||||||| | ||| ||||| || || |||||||| |||||
Sbjct: 23149657 ccaaggatgaggaaagggacatttgctagggattcatcagagagaagagcgtcaagctct 23149598
Query: 555 ttttttgattcagcaaatcgctccttatcatacgcatctaccaggtatactacagcatca 614
|| |||||||| ||||| | ||| || ||||| ||||| || |||||||| || ||||||
Sbjct: 23149597 ttctttgattctgcaaacctctctttgtcatatgcatcaactaggtataccactgcatca 23149538
Query: 615 acct 618
||||
Sbjct: 23149537 acct 23149534
>gb|BU636578.1|BU636578 008D06 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 373
Score = 81.8 bits (41), Expect = 1e-013
Identities = 167/209 (79%)
Strand = Plus / Minus
Query: 300 ttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaacactg 359
|||||||| || |||| ||| ||||| || ||||| || ||||| || || |||| |||
Sbjct: 245 ttgatgtactgagagagccatttgaatccctcgccataacccattttacggacaatgctg 186
Query: 360 cacatgaaaacctcaagtggccggacattggagtcgccaaggttgaccttgcccttcccg 419
|||||||| ||||||||||| || ||| ||||| || || | || |||||||| |||
Sbjct: 185 cacatgaagacctcaagtgggcgaacaccagagtctccgagcgtcactttgcccttaccg 126
Query: 420 gttgtgaagttgctaaggcctaggtgataccgcagctcctcttcagaggcagcatacggg 479
|| |||||||| | || || | |||||||| ||| || |||||||| || ||||| |||
Sbjct: 125 gtggtgaagttagtgagacccaagtgatacctcagttcgtcttcagaagctgcataaggg 66
Query: 480 atatcaatcttgttgccaaggatgagaaa 508
|||||||||||||| ||||| || |||||
Sbjct: 65 atatcaatcttgttcccaagaatcagaaa 37
>gb|AV565941.1|AV565941 AV565941 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ233e04F 3', mRNA sequence
Length = 549
Score = 81.8 bits (41), Expect = 1e-013
Identities = 167/209 (79%)
Strand = Plus / Plus
Query: 300 ttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaacactg 359
|||||||| || |||| ||| ||||| || ||||| || ||||| || || |||| |||
Sbjct: 282 ttgatgtactgagagagccatttgaatccctcgccataacccattttacggacaatgctg 341
Query: 360 cacatgaaaacctcaagtggccggacattggagtcgccaaggttgaccttgcccttcccg 419
|||||||| ||||||||||| || ||| ||||| || || | || |||||||| |||
Sbjct: 342 cacatgaagacctcaagtgggcgaacaccagagtctccgagcgtcactttgcccttaccg 401
Query: 420 gttgtgaagttgctaaggcctaggtgataccgcagctcctcttcagaggcagcatacggg 479
|| |||||||| | || || | |||||||| ||| || |||||||| || ||||| |||
Sbjct: 402 gtggtgaagttagtgagacccaagtgatacctcagttcgtcttcagaagctgcataaggg 461
Query: 480 atatcaatcttgttgccaaggatgagaaa 508
|||||||||||||| ||||| || |||||
Sbjct: 462 atatcaatcttgttcccaagaatcagaaa 490
>gb|BP787073.1|BP787073 BP787073 RAFL7 Arabidopsis thaliana cDNA clone RAFL26-02-N22 3',
mRNA sequence
Length = 429
Score = 81.8 bits (41), Expect = 1e-013
Identities = 113/137 (82%)
Strand = Plus / Plus
Query: 435 aggcctaggtgataccgcagctcctcttcagaggcagcatacgggatatcaatcttgttg 494
|||||||| ||||| |||||||| ||||| || ||||| ||||| || || || |||||
Sbjct: 275 aggcctagatgataacgcagctcgtcttctgatgcagcgtacggaatgtcgattttgttt 334
Query: 495 ccaaggatgagaaatggaacatttgccaaggaatcatctgacaggagagcgtccagctcc 554
||||||||||| || || |||||||| | ||| ||||| || || |||||||| |||||
Sbjct: 335 ccaaggatgaggaaagggacatttgctagggattcatcagagagaagagcgtcaagctct 394
Query: 555 ttttttgattcagcaaa 571
|| |||||||| |||||
Sbjct: 395 ttctttgattctgcaaa 411
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 75.8 bits (38), Expect = 8e-012
Identities = 254/326 (77%)
Strand = Plus / Minus
Query: 295 cctacttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaa 354
|||||||||| || || || | ||| || ||||| ||||| || ||||| ||||| || |
Sbjct: 2965764 cctacttgatatactgagatagccatttaaaaccctcgccataacccattttgcggacga 2965705
Query: 355 cactgcacatgaaaacctcaagtggccggacattggagtcgccaaggttgaccttgccct 414
||||||||||| |||||||| || || ||| ||||| |||| || || |||| |
Sbjct: 2965704 tgctgcacatgaagacctcaaggggacgaacaccagagtcttcaagattcactatgcctt 2965645
Query: 415 tcccggttgtgaagttgctaaggcctaggtgataccgcagctcctcttcagaggcagcat 474
| ||||| ||||| ||| | || |||| || ||||| ||||| ||||| |||| ||||
Sbjct: 2965644 taccggtagtgaaattggtgagacctaagtaatacctaagctcatcttctgaggatgcat 2965585
Query: 475 acgggatatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaatcatctg 534
| || |||||||||||||||||||| || ||| | ||||||||||| |||| |||||||
Sbjct: 2965584 aaggtatatcaatcttgttgccaagaataagacagggaacatttgctaaggcttcatctg 2965525
Query: 535 acaggagagcgtccagctccttttttgattcagcaaatcgctccttatcatacgcatcta 594
| | |||||||| ||||| |||| || || |||||| ||| | || || ||||| |
Sbjct: 2965524 ataaaagagcgtctagctctcttttcgactccacaaatctatccctgtcgtaagcatcca 2965465
Query: 595 ccaggtatactacagcatcaaccttt 620
| ||||| || |||||||||||||||
Sbjct: 2965464 ctaggtagacaacagcatcaaccttt 2965439
Score = 54.0 bits (27), Expect = 3e-005
Identities = 96/119 (80%)
Strand = Plus / Minus
Query: 500 gatgagaaatggaacatttgccaaggaatcatctgacaggagagcgtccagctccttttt 559
|||||| ||||| ||| | || ||||| || ||||| || || || || |||||||||||
Sbjct: 557523 gatgaggaatgggacagtggctaaggattcgtctgagagaagtgcatcaagctccttttt 557464
Query: 560 tgattcagcaaatcgctccttatcatacgcatctaccaggtatactacagcatcaacct 618
|||||| ||||||| ||||| ||||| ||||| || | ||| || | |||||||||||
Sbjct: 557463 tgattctgcaaatctctcctggtcataagcatccactaagtagaccagagcatcaacct 557405
>gb|AC003114.1|T12M4 Arabidopsis thaliana chromosome 1 BAC T12M4 sequence, complete sequence
Length = 59261
Score = 75.8 bits (38), Expect = 8e-012
Identities = 254/326 (77%)
Strand = Plus / Plus
Query: 295 cctacttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaa 354
|||||||||| || || || | ||| || ||||| ||||| || ||||| ||||| || |
Sbjct: 36307 cctacttgatatactgagatagccatttaaaaccctcgccataacccattttgcggacga 36366
Query: 355 cactgcacatgaaaacctcaagtggccggacattggagtcgccaaggttgaccttgccct 414
||||||||||| |||||||| || || ||| ||||| |||| || || |||| |
Sbjct: 36367 tgctgcacatgaagacctcaaggggacgaacaccagagtcttcaagattcactatgcctt 36426
Query: 415 tcccggttgtgaagttgctaaggcctaggtgataccgcagctcctcttcagaggcagcat 474
| ||||| ||||| ||| | || |||| || ||||| ||||| ||||| |||| ||||
Sbjct: 36427 taccggtagtgaaattggtgagacctaagtaatacctaagctcatcttctgaggatgcat 36486
Query: 475 acgggatatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaatcatctg 534
| || |||||||||||||||||||| || ||| | ||||||||||| |||| |||||||
Sbjct: 36487 aaggtatatcaatcttgttgccaagaataagacagggaacatttgctaaggcttcatctg 36546
Query: 535 acaggagagcgtccagctccttttttgattcagcaaatcgctccttatcatacgcatcta 594
| | |||||||| ||||| |||| || || |||||| ||| | || || ||||| |
Sbjct: 36547 ataaaagagcgtctagctctcttttcgactccacaaatctatccctgtcgtaagcatcca 36606
Query: 595 ccaggtatactacagcatcaaccttt 620
| ||||| || |||||||||||||||
Sbjct: 36607 ctaggtagacaacagcatcaaccttt 36632
>gb|AU226742.1|AU226742 AU226742 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-55-C04 3',
mRNA sequence
Length = 432
Score = 73.8 bits (37), Expect = 3e-011
Identities = 112/137 (81%)
Strand = Plus / Plus
Query: 435 aggcctaggtgataccgcagctcctcttcagaggcagcatacgggatatcaatcttgttg 494
|||||||| ||||| |||||||| ||||| || ||||| ||||| || || || |||||
Sbjct: 282 aggcctagatgataacgcagctcgtcttctgatgcagcgtacggaatgtcgattttgttt 341
Query: 495 ccaaggatgagaaatggaacatttgccaaggaatcatctgacaggagagcgtccagctcc 554
||||||||||| || || |||||||| | ||| ||||| || || |||||||| || ||
Sbjct: 342 ccaaggatgaggaaagggacatttgctagggattcatcagagagaagagcgtcaagatct 401
Query: 555 ttttttgattcagcaaa 571
|| |||||||| |||||
Sbjct: 402 ttctttgattctgcaaa 418
>gb|CB257839.1|CB257839 44-E011083-014-003-H12-T7R MPIZ-ADIS-014 Arabidopsis thaliana cDNA
clone MPIZp771H123Q 5-PRIME, mRNA sequence
Length = 619
Score = 73.8 bits (37), Expect = 3e-011
Identities = 148/185 (80%)
Strand = Plus / Minus
Query: 453 agctcctcttcagaggcagcatacgggatatcaatcttgttgccaaggatgagaaatgga 512
||||| ||||| |||| ||||| || |||||||||||||||||||| || ||| | |||
Sbjct: 549 agctcatcttctgaggatgcataaggaatatcaatcttgttgccaagaataagacaggga 490
Query: 513 acatttgccaaggaatcatctgacaggagagcgtccagctccttttttgattcagcaaat 572
|||||||| |||| |||||||| | |||||||| ||||| |||| || || |||||
Sbjct: 489 acatttgctaaggcttcatctgataaaagagcgtctagctctcttttcgactccacaaat 430
Query: 573 cgctccttatcatacgcatctaccaggtatactacagcatcaacctttgcgtagtaatcc 632
| ||| | || || ||||| || ||||| || |||||||||||||| || ||||| ||
Sbjct: 429 ctatccctgtcgtaagcatccactaggtagacaacagcatcaaccttggcatagtagtct 370
Query: 633 ttcca 637
|||||
Sbjct: 369 ttcca 365
>gb|BP796332.1|BP796332 BP796332 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-03-E08 5',
mRNA sequence
Length = 667
Score = 73.8 bits (37), Expect = 3e-011
Identities = 139/173 (80%)
Strand = Plus / Minus
Query: 468 gcagcatacgggatatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaa 527
||||||||||| || || |||||||| || || ||||| |||||||| | || | |||
Sbjct: 506 gcagcatacggtatgtctatcttgtttcctagaatgaggaatggaacgctggctagggat 447
Query: 528 tcatctgacaggagagcgtccagctccttttttgattcagcaaatcgctccttatcatac 587
|| ||||| || || || || || |||||||||||||| ||||||| ||| || || ||
Sbjct: 446 tcgtctgagagaagtgcatcaagttccttttttgattctgcaaatctctctttgtcgtaa 387
Query: 588 gcatctaccaggtatactacagcatcaacctttgcgtagtaatccttccagac 640
||||| || ||||| || ||||| || ||||| || |||||||||||||||||
Sbjct: 386 gcatcaactaggtagaccacagcgtccaccttagcatagtaatccttccagac 334
>gb|BP798611.1|BP798611 BP798611 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-07-N14 5',
mRNA sequence
Length = 402
Score = 73.8 bits (37), Expect = 3e-011
Identities = 85/101 (84%)
Strand = Plus / Minus
Query: 540 agagcgtccagctccttttttgattcagcaaatcgctccttatcatacgcatctaccagg 599
|||||||| ||||| || |||||||| ||||| | ||| || ||||| ||||| || |||
Sbjct: 393 agagcgtcaagctctttctttgattctgcaaacctctctttgtcatatgcatcaactagg 334
Query: 600 tatactacagcatcaacctttgcgtagtaatccttccagac 640
||||| || ||||||||||| ||||| || |||||||||||
Sbjct: 333 tataccactgcatcaaccttagcgtaatagtccttccagac 293
>gb|BP856044.1|BP856044 BP856044 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-28-K13 5',
mRNA sequence
Length = 408
Score = 73.8 bits (37), Expect = 3e-011
Identities = 85/101 (84%)
Strand = Plus / Minus
Query: 540 agagcgtccagctccttttttgattcagcaaatcgctccttatcatacgcatctaccagg 599
|||||||| ||||| || |||||||| ||||| | ||| || ||||| ||||| || |||
Sbjct: 395 agagcgtcaagctctttctttgattctgcaaacctctctttttcatatgcatcaactagg 336
Query: 600 tatactacagcatcaacctttgcgtagtaatccttccagac 640
||||| || ||||||||||| ||||| || |||||||||||
Sbjct: 335 tataccactgcatcaaccttagcgtaatagtccttccagac 295
>gb|U56929.1|ATU56929 Arabidospis thaliana GTP binding protein, Sar1 homolog (ASAR1)
mRNA, complete cds
Length = 899
Score = 73.8 bits (37), Expect = 3e-011
Identities = 139/173 (80%)
Strand = Plus / Minus
Query: 468 gcagcatacgggatatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaa 527
||||||||||| || || |||||||| || || ||||| |||||||| | || | |||
Sbjct: 480 gcagcatacggtatgtctatcttgtttcctagaatgaggaatggaacgctggctagggat 421
Query: 528 tcatctgacaggagagcgtccagctccttttttgattcagcaaatcgctccttatcatac 587
|| ||||| || || || || || |||||||||||||| ||||||| ||| || || ||
Sbjct: 420 tcgtctgagagaagtgcatcaagttccttttttgattctgcaaatctctctttgtcgtaa 361
Query: 588 gcatctaccaggtatactacagcatcaacctttgcgtagtaatccttccagac 640
||||| || ||||| || ||||| || ||||| || |||||||||||||||||
Sbjct: 360 gcatcaactaggtagaccacagcgtccaccttagcatagtaatccttccagac 308
Score = 58.0 bits (29), Expect = 2e-006
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 297 tacttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaaca 356
|||||||||||||| || ||||| |||||||| || ||||| ||||| || | ||||
Sbjct: 651 tacttgatgtattgagaaacccatttgaaaccttctccgtaacccattttcctgacaatg 592
Query: 357 ctgcacatgaaaacctc 373
|||||||||||||||||
Sbjct: 591 ctgcacatgaaaacctc 575
>gb|AY065357.1| Arabidopsis thaliana putative SAR1/GTP-binding secretory factor
(At4g02080) mRNA, complete cds
Length = 926
Score = 73.8 bits (37), Expect = 3e-011
Identities = 139/173 (80%)
Strand = Plus / Minus
Query: 468 gcagcatacgggatatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaa 527
||||||||||| || || |||||||| || || ||||| |||||||| | || | |||
Sbjct: 467 gcagcatacggtatgtctatcttgtttcctagaatgaggaatggaacgctggctagggat 408
Query: 528 tcatctgacaggagagcgtccagctccttttttgattcagcaaatcgctccttatcatac 587
|| ||||| || || || || || |||||||||||||| ||||||| ||| || || ||
Sbjct: 407 tcgtctgagagaagtgcatcaagttccttttttgattctgcaaatctctctttgtcgtaa 348
Query: 588 gcatctaccaggtatactacagcatcaacctttgcgtagtaatccttccagac 640
||||| || ||||| || ||||| || ||||| || |||||||||||||||||
Sbjct: 347 gcatcaactaggtagaccacagcgtccaccttagcatagtaatccttccagac 295
Score = 58.0 bits (29), Expect = 2e-006
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 297 tacttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaaca 356
|||||||||||||| || ||||| |||||||| || ||||| ||||| || | ||||
Sbjct: 638 tacttgatgtattgagaaacccatttgaaaccttctccgtaacccattttcctgacaatg 579
Query: 357 ctgcacatgaaaacctc 373
|||||||||||||||||
Sbjct: 578 ctgcacatgaaaacctc 562
>gb|AY090921.1| Arabidopsis thaliana putative GTP-binding protein, SAR1B
(At1g09180) mRNA, complete cds
Length = 613
Score = 73.8 bits (37), Expect = 3e-011
Identities = 253/325 (77%)
Strand = Plus / Minus
Query: 295 cctacttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaa 354
|||||||||| || || || | ||| || ||||| ||||| || ||||| ||||| || |
Sbjct: 583 cctacttgatatactgagatagccatttaaaaccctcgccataacccattttgcggacga 524
Query: 355 cactgcacatgaaaacctcaagtggccggacattggagtcgccaaggttgaccttgccct 414
||||||||||| |||||||| || || ||| ||||| |||| || || |||| |
Sbjct: 523 tgctgcacatgaagacctcaaggggacgaacaccagagtcttcaagattcactatgcctt 464
Query: 415 tcccggttgtgaagttgctaaggcctaggtgataccgcagctcctcttcagaggcagcat 474
| ||||| ||||| ||| | || |||| || ||||| ||||| ||||| |||| ||||
Sbjct: 463 taccggtagtgaaattggtgagacctaagtaatacctaagctcatcttctgaggatgcat 404
Query: 475 acgggatatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaatcatctg 534
| || |||||||||||||||||||| || ||| | ||||||||||| |||| |||||||
Sbjct: 403 aaggtatatcaatcttgttgccaagaataagacagggaacatttgctaaggcttcatctg 344
Query: 535 acaggagagcgtccagctccttttttgattcagcaaatcgctccttatcatacgcatcta 594
| | |||||||| ||||| |||| || || |||||| ||| | || || ||||| |
Sbjct: 343 ataaaagagcgtctagctctcttttcgactccacaaatctatccctgtcgtaagcatcca 284
Query: 595 ccaggtatactacagcatcaacctt 619
| ||||| || ||||||||||||||
Sbjct: 283 ctaggtagacaacagcatcaacctt 259
>gb|AY096699.1| Arabidopsis thaliana putative SAR1/GTP-binding secretory factor
(At4g02080) mRNA, complete cds
Length = 613
Score = 73.8 bits (37), Expect = 3e-011
Identities = 139/173 (80%)
Strand = Plus / Minus
Query: 468 gcagcatacgggatatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaa 527
||||||||||| || || |||||||| || || ||||| |||||||| | || | |||
Sbjct: 410 gcagcatacggtatgtctatcttgtttcctagaatgaggaatggaacgctggctagggat 351
Query: 528 tcatctgacaggagagcgtccagctccttttttgattcagcaaatcgctccttatcatac 587
|| ||||| || || || || || |||||||||||||| ||||||| ||| || || ||
Sbjct: 350 tcgtctgagagaagtgcatcaagttccttttttgattctgcaaatctctctttgtcgtaa 291
Query: 588 gcatctaccaggtatactacagcatcaacctttgcgtagtaatccttccagac 640
||||| || ||||| || ||||| || ||||| || |||||||||||||||||
Sbjct: 290 gcatcaactaggtagaccacagcgtccaccttagcatagtaatccttccagac 238
Score = 58.0 bits (29), Expect = 2e-006
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 297 tacttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaaca 356
|||||||||||||| || ||||| |||||||| || ||||| ||||| || | ||||
Sbjct: 581 tacttgatgtattgagaaacccatttgaaaccttctccgtaacccattttcctgacaatg 522
Query: 357 ctgcacatgaaaacctc 373
|||||||||||||||||
Sbjct: 521 ctgcacatgaaaacctc 505
>gb|AY088765.1| Arabidopsis thaliana clone 94610 mRNA, complete sequence
Length = 884
Score = 73.8 bits (37), Expect = 3e-011
Identities = 139/173 (80%)
Strand = Plus / Minus
Query: 468 gcagcatacgggatatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaa 527
||||||||||| || || |||||||| || || ||||| |||||||| | || | |||
Sbjct: 502 gcagcatacggtatgtctatcttgtttcctagaatgaggaatggaacgctggctagggat 443
Query: 528 tcatctgacaggagagcgtccagctccttttttgattcagcaaatcgctccttatcatac 587
|| ||||| || || || || || |||||||||||||| ||||||| ||| || || ||
Sbjct: 442 tcgtctgagagaagtgcatcaagttccttttttgattctgcaaatctctctttgtcgtaa 383
Query: 588 gcatctaccaggtatactacagcatcaacctttgcgtagtaatccttccagac 640
||||| || ||||| || ||||| || ||||| || |||||||||||||||||
Sbjct: 382 gcatcaactaggtagaccacagcgtccaccttagcatagtaatccttccagac 330
Score = 58.0 bits (29), Expect = 2e-006
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 297 tacttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaaca 356
|||||||||||||| || ||||| |||||||| || ||||| ||||| || | ||||
Sbjct: 673 tacttgatgtattgagaaacccatttgaaaccttctccgtaacccattttcctgacaatg 614
Query: 357 ctgcacatgaaaacctc 373
|||||||||||||||||
Sbjct: 613 ctgcacatgaaaacctc 597
>emb|BX827737.1|CNS0A32X Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH16ZD04 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 685
Score = 73.8 bits (37), Expect = 3e-011
Identities = 139/173 (80%)
Strand = Plus / Minus
Query: 468 gcagcatacgggatatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaa 527
||||||||||| || || |||||||| || || ||||| |||||||| | || | |||
Sbjct: 283 gcagcatacggtatgtctatcttgtttcctagaatgaggaatggaacgctggctagggat 224
Query: 528 tcatctgacaggagagcgtccagctccttttttgattcagcaaatcgctccttatcatac 587
|| ||||| || || || || || |||||||||||||| ||||||| ||| || || ||
Sbjct: 223 tcgtctgagagaagtgcatcaagttccttttttgattctgcaaatctctctttgtcgtaa 164
Query: 588 gcatctaccaggtatactacagcatcaacctttgcgtagtaatccttccagac 640
||||| || ||||| || ||||| || ||||| || |||||||||||||||||
Sbjct: 163 gcatcaactaggtagaccacagcgtccaccttagcatagtaatccttccagac 111
Score = 58.0 bits (29), Expect = 2e-006
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 297 tacttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaaca 356
|||||||||||||| || ||||| |||||||| || ||||| ||||| || | ||||
Sbjct: 454 tacttgatgtattgagaaacccatttgaaaccttctccgtaacccattttcctgacaatg 395
Query: 357 ctgcacatgaaaacctc 373
|||||||||||||||||
Sbjct: 394 ctgcacatgaaaacctc 378
>ref|NM_116440.2| Arabidopsis thaliana ASAR1; GTP binding AT4G02080 (ASAR1) mRNA,
complete cds
Length = 903
Score = 73.8 bits (37), Expect = 3e-011
Identities = 139/173 (80%)
Strand = Plus / Minus
Query: 468 gcagcatacgggatatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaa 527
||||||||||| || || |||||||| || || ||||| |||||||| | || | |||
Sbjct: 502 gcagcatacggtatgtctatcttgtttcctagaatgaggaatggaacgctggctagggat 443
Query: 528 tcatctgacaggagagcgtccagctccttttttgattcagcaaatcgctccttatcatac 587
|| ||||| || || || || || |||||||||||||| ||||||| ||| || || ||
Sbjct: 442 tcgtctgagagaagtgcatcaagttccttttttgattctgcaaatctctctttgtcgtaa 383
Query: 588 gcatctaccaggtatactacagcatcaacctttgcgtagtaatccttccagac 640
||||| || ||||| || ||||| || ||||| || |||||||||||||||||
Sbjct: 382 gcatcaactaggtagaccacagcgtccaccttagcatagtaatccttccagac 330
Score = 58.0 bits (29), Expect = 2e-006
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 297 tacttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaaca 356
|||||||||||||| || ||||| |||||||| || ||||| ||||| || | ||||
Sbjct: 673 tacttgatgtattgagaaacccatttgaaaccttctccgtaacccattttcctgacaatg 614
Query: 357 ctgcacatgaaaacctc 373
|||||||||||||||||
Sbjct: 613 ctgcacatgaaaacctc 597
>ref|NM_100788.3| Arabidopsis thaliana ATSAR1/ATSARA1A; GTP binding AT1G09180
(ATSAR1/ATSARA1A) mRNA, complete cds
Length = 737
Score = 73.8 bits (37), Expect = 3e-011
Identities = 253/325 (77%)
Strand = Plus / Minus
Query: 295 cctacttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaa 354
|||||||||| || || || | ||| || ||||| ||||| || ||||| ||||| || |
Sbjct: 707 cctacttgatatactgagatagccatttaaaaccctcgccataacccattttgcggacga 648
Query: 355 cactgcacatgaaaacctcaagtggccggacattggagtcgccaaggttgaccttgccct 414
||||||||||| |||||||| || || ||| ||||| |||| || || |||| |
Sbjct: 647 tgctgcacatgaagacctcaaggggacgaacaccagagtcttcaagattcactatgcctt 588
Query: 415 tcccggttgtgaagttgctaaggcctaggtgataccgcagctcctcttcagaggcagcat 474
| ||||| ||||| ||| | || |||| || ||||| ||||| ||||| |||| ||||
Sbjct: 587 taccggtagtgaaattggtgagacctaagtaatacctaagctcatcttctgaggatgcat 528
Query: 475 acgggatatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaatcatctg 534
| || |||||||||||||||||||| || ||| | ||||||||||| |||| |||||||
Sbjct: 527 aaggtatatcaatcttgttgccaagaataagacagggaacatttgctaaggcttcatctg 468
Query: 535 acaggagagcgtccagctccttttttgattcagcaaatcgctccttatcatacgcatcta 594
| | |||||||| ||||| |||| || || |||||| ||| | || || ||||| |
Sbjct: 467 ataaaagagcgtctagctctcttttcgactccacaaatctatccctgtcgtaagcatcca 408
Query: 595 ccaggtatactacagcatcaacctt 619
| ||||| || ||||||||||||||
Sbjct: 407 ctaggtagacaacagcatcaacctt 383
>gb|N37802.1|N37802 19029 Lambda-PRL2 Arabidopsis thaliana cDNA clone 210M17T7, mRNA
sequence
Length = 488
Score = 71.9 bits (36), Expect = 1e-010
Identities = 138/173 (79%)
Strand = Plus / Minus
Query: 468 gcagcatacgggatatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaa 527
||||||||||| || || |||||||| || || ||||| |||||||| | || | |||
Sbjct: 314 gcagcatacggnatgtctatcttgttncctagaatgaggaatggaacgctggctagggat 255
Query: 528 tcatctgacaggagagcgtccagctccttttttgattcagcaaatcgctccttatcatac 587
|| ||||| || || || || || |||||||||||||| | ||||| ||| || || ||
Sbjct: 254 tcgtctgagagaagtgcatcaagttccttttttgattctgnaaatctctctttgtcgtaa 195
Query: 588 gcatctaccaggtatactacagcatcaacctttgcgtagtaatccttccagac 640
||||| || ||||| || ||||| || ||||| || |||||||||||||||||
Sbjct: 194 gcatcaactaggtagaccacagcgtccaccttagcatagtaatccttccagac 142
>gb|BH810290.1|BH810290 SALK_048796 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_048796, DNA sequence
Length = 458
Score = 69.9 bits (35), Expect = 5e-010
Identities = 203/259 (78%)
Strand = Plus / Minus
Query: 295 cctacttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaa 354
|||||||||| || || || | ||| || ||||| ||||| || ||||| ||||| || |
Sbjct: 272 cctacttgatatactgagatagccatttaaaaccctcgccataacccattttgcggacga 213
Query: 355 cactgcacatgaaaacctcaagtggccggacattggagtcgccaaggttgaccttgccct 414
||||||||||| |||||||| || || ||| ||||| |||| || || |||| |
Sbjct: 212 tgctgcacatgaagacctcaaggggacgaacaccagagtcttcaagattcactatgcctt 153
Query: 415 tcccggttgtgaagttgctaaggcctaggtgataccgcagctcctcttcagaggcagcat 474
| ||||| ||||| ||| | || |||| || ||||| ||||| ||||| |||| ||||
Sbjct: 152 taccggtagtgaaattggtgagacctaagtaatacctaagctcatcttctgaggatgcat 93
Query: 475 acgggatatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaatcatctg 534
| || |||||||||||||||||||| || ||| | ||||||||||| |||| |||||||
Sbjct: 92 aaggtatatcaatcttgttgccaagaataagacagggaacatttgctaaggcttcatctg 33
Query: 535 acaggagagcgtccagctc 553
| | |||||||| |||||
Sbjct: 32 ataaaagagcgtctagctc 14
>gb|BP566240.1|BP566240 BP566240 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-53-A19 3',
mRNA sequence
Length = 443
Score = 69.9 bits (35), Expect = 5e-010
Identities = 98/119 (82%)
Strand = Plus / Plus
Query: 435 aggcctaggtgataccgcagctcctcttcagaggcagcatacgggatatcaatcttgttg 494
|||||||| ||||| ||||||| ||||| || ||||| ||||| || || || |||||
Sbjct: 309 aggcctagatgataaggcagctcgtcttctgatgcagcgtacggaatgtcgattttgttt 368
Query: 495 ccaaggatgagaaatggaacatttgccaaggaatcatctgacaggagagcgtccagctc 553
||||||||||| || || |||||||| | ||| ||||| || || ||||||||||||||
Sbjct: 369 ccaaggatgaggaaagggacatttgctagggattcatccgagagaagagcgtccagctc 427
>gb|BP563740.1|BP563740 BP563740 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-04-G15 3',
mRNA sequence
Length = 429
Score = 67.9 bits (34), Expect = 2e-009
Identities = 155/194 (79%), Gaps = 1/194 (0%)
Strand = Plus / Plus
Query: 300 ttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaacactg 359
|||||||| || |||| ||| ||||| || ||||| || ||||| || || |||| |||
Sbjct: 237 ttgatgtactgagagagccatttgaatccctcgccataacccattttacggacaatgctg 296
Query: 360 cacatgaaaacctcaagtggccggacattggagtcgccaaggttgaccttgcccttcccg 419
|||||||| || |||||||| || |||| ||||| || || | || |||||||| |||
Sbjct: 297 cacatgaagac-tcaagtgggcgaacatcagagtctccgagcgtcactttgcccttaccg 355
Query: 420 gttgtgaagttgctaaggcctaggtgataccgcagctcctcttcagaggcagcatacggg 479
|| |||||||| | || || | |||||||| ||| || |||||||| || ||||| |||
Sbjct: 356 gtggtgaagttagtgagacccaagtgatacctcagttcgtcttcagaagctgcataaggg 415
Query: 480 atatcaatcttgtt 493
||||||||||||||
Sbjct: 416 atatcaatcttgtt 429
>gb|BP665675.1|BP665675 BP665675 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-17-D06 3',
mRNA sequence
Length = 427
Score = 67.9 bits (34), Expect = 2e-009
Identities = 154/194 (79%)
Strand = Plus / Plus
Query: 300 ttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaacactg 359
|||||||| || |||| ||| ||||| || ||||| || ||||| || || |||| |||
Sbjct: 120 ttgatgtactgagagagccatttgaatccctcgccataacccattttacggacaatgctg 179
Query: 360 cacatgaaaacctcaagtggccggacattggagtcgccaaggttgaccttgcccttcccg 419
|||||||| ||||||||||| || ||| ||||| || || | || |||||||| |||
Sbjct: 180 cacatgaagacctcaagtgggcgaacaccagagtctccgagcgtcactttgcccttaccg 239
Query: 420 gttgtgaagttgctaaggcctaggtgataccgcagctcctcttcagaggcagcatacggg 479
|| |||||||| | || || | |||||||| ||| || |||||||| || | ||| |||
Sbjct: 240 gtggtgaagttagtgagacccaagtgatacctcagttcgtcttcagaagctggataaggg 299
Query: 480 atatcaatcttgtt 493
||||||||||||||
Sbjct: 300 atatcaatcttgtt 313
>gb|BP663592.1|BP663592 BP663592 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-48-M20 3',
mRNA sequence
Length = 341
Score = 65.9 bits (33), Expect = 8e-009
Identities = 84/101 (83%)
Strand = Plus / Plus
Query: 408 ttgcccttcccggttgtgaagttgctaaggcctaggtgataccgcagctcctcttcagag 467
|||||||| ||||| |||||||| | || || | |||||||| ||| || ||||||||
Sbjct: 224 ttgcccttaccggtggtgaagttagtgagacccaagtgatacctcagttcgtcttcagaa 283
Query: 468 gcagcatacgggatatcaatcttgttgccaaggatgagaaa 508
|| ||||| ||||||||||||||||| ||||| || |||||
Sbjct: 284 gctgcataagggatatcaatcttgttcccaagaatcagaaa 324
>gb|BP632260.1|BP632260 BP632260 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-26-H11 3',
mRNA sequence
Length = 373
Score = 60.0 bits (30), Expect = 5e-007
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 435 aggcctaggtgataccgcagctcctcttcagaggcagcatacgggatatcaatcttgttg 494
|||||||| ||||| |||||||| ||||| || ||||| ||||| || || || |||||
Sbjct: 281 aggcctagatgataacgcagctcgtcttctgatgcagcgtacggaatgtcgattttgttt 340
Query: 495 ccaaggatgagaaatggaacatttgc 520
||||||||||| || || ||||||||
Sbjct: 341 ccaaggatgaggaaagggacatttgc 366
>gb|BP655222.1|BP655222 BP655222 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-20-H21 3',
mRNA sequence
Length = 370
Score = 60.0 bits (30), Expect = 5e-007
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 435 aggcctaggtgataccgcagctcctcttcagaggcagcatacgggatatcaatcttgttg 494
|||||||| ||||| |||||||| ||||| || ||||| ||||| || || || |||||
Sbjct: 279 aggcctagatgataacgcagctcgtcttctgatgcagcgtacggaatgtcgattttgttt 338
Query: 495 ccaaggatgagaaatggaacatttgc 520
||||||||||| || || ||||||||
Sbjct: 339 ccaaggatgaggaaagggacatttgc 364
>gb|BP807256.1|BP807256 BP807256 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-13-B03 5',
mRNA sequence
Length = 399
Score = 60.0 bits (30), Expect = 5e-007
Identities = 85/102 (83%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 540 agagcgtccagctccttttttgattcagcaaatcgctccttatcatacgcatctacc-ag 598
|||||||| ||||| || |||||||| ||||| | ||| || ||||| ||||| | | ||
Sbjct: 390 agagcgtcaagctctttctttgattctgcaaacctctctttgtcatatgcatcaaactag 331
Query: 599 gtatactacagcatcaacctttgcgtagtaatccttccagac 640
|||||| || ||||||||||| ||||| || |||||||||||
Sbjct: 330 gtataccactgcatcaaccttagcgtaatagtccttccagac 289
>gb|Z26132.1|Z26132 ATTS1404 Versailles-VC Arabidopsis thaliana cDNA clone VCVCD07 5'
similar to GTP-binding protein., mRNA sequence
Length = 417
Score = 60.0 bits (30), Expect = 5e-007
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 556 tttttgattcagcaaatcgctccttatcatacgcatctaccaggtatactacagcatcaa 615
|||||||||| ||||||| ||| || || || ||||| || ||||| || ||||| || |
Sbjct: 355 tttttgattctgcaaatctctctttgtcgtaagcatcaactaggtagaccacagcgtcna 296
Query: 616 cctttgcgtagtaatccttccagac 640
|||| || |||||||||||||||||
Sbjct: 295 ccttagcatagtaatccttccagac 271
>gb|AA597933.1|AA597933 29182 Lambda-PRL2 Arabidopsis thaliana cDNA clone 247P17T7, mRNA
sequence
Length = 411
Score = 58.0 bits (29), Expect = 2e-006
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 297 tacttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaaca 356
|||||||||||||| || ||||| |||||||| || ||||| ||||| || | ||||
Sbjct: 265 tacttgatgtattgagaaacccatttgaaaccttctccgtaacccattttcctgacaatg 206
Query: 357 ctgcacatgaaaacctc 373
|||||||||||||||||
Sbjct: 205 ctgcacatgaaaacctc 189
>gb|AA713305.1|AA713305 32865 Lambda-PRL2 Arabidopsis thaliana cDNA clone 249B2T7, mRNA
sequence
Length = 454
Score = 58.0 bits (29), Expect = 2e-006
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 297 tacttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaaca 356
|||||||||||||| || ||||| |||||||| || ||||| ||||| || | ||||
Sbjct: 237 tacttgatgtattgagaaacccatttgaaaccttctccgtaacccattttcctgacaatg 178
Query: 357 ctgcacatgaaaacctc 373
|||||||||||||||||
Sbjct: 177 ctgcacatgaaaacctc 161
>gb|AI996950.1|AI996950 701551307 A. thaliana, Columbia Col-0, root-2 Arabidopsis thaliana
cDNA clone 701551307, mRNA sequence
Length = 517
Score = 58.0 bits (29), Expect = 2e-006
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 297 tacttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaaca 356
|||||||||||||| || ||||| |||||||| || ||||| ||||| || | ||||
Sbjct: 191 tacttgatgtattgagaaacccatttgaaaccttctccgtaacccattttcctgacaatg 250
Query: 357 ctgcacatgaaaacctc 373
|||||||||||||||||
Sbjct: 251 ctgcacatgaaaacctc 267
Score = 44.1 bits (22), Expect = 0.029
Identities = 85/106 (80%)
Strand = Plus / Plus
Query: 468 gcagcatacgggatatcaatcttgttgccaaggatgagaaatggaacatttgccaaggaa 527
||||||||||| || || |||||||| || || ||||| |||||||| | || | |||
Sbjct: 362 gcagcatacggtatgtctatcttgtttcctagaatgaggaatggaacgctggctagggat 421
Query: 528 tcatctgacaggagagcgtccagctccttttttgattcagcaaatc 573
|| ||||| || || || || || |||||||||||||| |||||||
Sbjct: 422 tcgtctgagagaagtgcatcaagttccttttttgattctgcaaatc 467
>gb|AV801001.1|AV801001 AV801001 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-26-G06 3',
mRNA sequence
Length = 408
Score = 58.0 bits (29), Expect = 2e-006
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 297 tacttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaaca 356
|||||||||||||| || ||||| |||||||| || ||||| ||||| || | ||||
Sbjct: 231 tacttgatgtattgagaaacccatttgaaaccttctccgtaacccattttcctgacaatg 290
Query: 357 ctgcacatgaaaacctc 373
|||||||||||||||||
Sbjct: 291 ctgcacatgaaaacctc 307
>gb|AV804199.1|AV804199 AV804199 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-38-E06 3',
mRNA sequence
Length = 414
Score = 58.0 bits (29), Expect = 2e-006
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 297 tacttgatgtattgggagacccacttgaaaccatcgccgtagcccatcttgcgaacaaca 356
|||||||||||||| || ||||| |||||||| || ||||| ||||| || | ||||
Sbjct: 231 tacttgatgtattgagaaacccatttgaaaccttctccgtaacccattttcctgacaatg 290
Query: 357 ctgcacatgaaaacctc 373
|||||||||||||||||
Sbjct: 291 ctgcacatgaaaacctc 307
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 301,263
Number of Sequences: 1013581
Number of extensions: 301263
Number of successful extensions: 21611
Number of sequences better than 0.5: 142
Number of HSP's better than 0.5 without gapping: 139
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 20285
Number of HSP's gapped (non-prelim): 1303
length of query: 643
length of database: 908,940,872
effective HSP length: 20
effective length of query: 623
effective length of database: 888,669,252
effective search space: 553640943996
effective search space used: 553640943996
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)