BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440612.2.2
(665 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|AL094414.1|CNS00X4G Arabidopsis thaliana genome survey ... 40 0.47
gb|BZ660566.1|BZ660566 SALK_024017.39.30.x Arabidopsis thal... 40 0.47
gb|T04082.1|T04082 32 Lambda-PRL1 Arabidopsis thaliana cDNA... 40 0.47
gb|T43215.1|T43215 6478 Lambda-PRL2 Arabidopsis thaliana cD... 40 0.47
gb|AA712335.1|AA712335 32063 Lambda-PRL2 Arabidopsis thalia... 40 0.47
gb|AA712554.1|AA712554 31687 Lambda-PRL2 Arabidopsis thalia... 40 0.47
gb|AA712693.1|AA712693 31826 Lambda-PRL2 Arabidopsis thalia... 40 0.47
gb|H37692.1|H37692 15821 Lambda-PRL2 Arabidopsis thaliana c... 40 0.47
gb|N37912.1|N37912 19139 Lambda-PRL2 Arabidopsis thaliana c... 40 0.47
gb|T42542.1|T42542 5805 Lambda-PRL2 Arabidopsis thaliana cD... 40 0.47
gb|BE038877.1|BE038877 AB05D05 AB Arabidopsis thaliana cDNA... 40 0.47
gb|AV783307.1|AV783307 AV783307 RAFL5 Arabidopsis thaliana ... 40 0.47
gb|AV819353.1|AV819353 AV819353 RAFL11 Arabidopsis thaliana... 40 0.47
gb|AV821077.1|AV821077 AV821077 RAFL11 Arabidopsis thaliana... 40 0.47
gb|AV822521.1|AV822521 AV822521 RAFL5 Arabidopsis thaliana ... 40 0.47
gb|AV824983.1|AV824983 AV824983 RAFL6 Arabidopsis thaliana ... 40 0.47
gb|CB261602.1|CB261602 94-E8881-008-014-L24-pBl2 MPIZ-ADIS-... 40 0.47
gb|CB264677.1|CB264677 41-E015024-035-004-B12-T7R MPIZ-ADIS... 40 0.47
gb|BX838516.1|BX838516 BX838516 Arabidopsis thaliana Flower... 40 0.47
gb|AV535741.1|AV535741 AV535741 Arabidopsis thaliana flower... 40 0.47
gb|AV536145.1|AV536145 AV536145 Arabidopsis thaliana liquid... 40 0.47
gb|AV549229.1|AV549229 AV549229 Arabidopsis thaliana roots ... 40 0.47
gb|AV566360.1|AV566360 AV566360 Arabidopsis thaliana green ... 40 0.47
gb|AV566873.1|AV566873 AV566873 Arabidopsis thaliana green ... 40 0.47
gb|CK117578.1|CK117578 215n16.p1 AtM1 Arabidopsis thaliana ... 40 0.47
gb|CK119154.1|CK119154 214a18.p1 AtM1 Arabidopsis thaliana ... 40 0.47
gb|CK119386.1|CK119386 201k20.p1 AtM1 Arabidopsis thaliana ... 40 0.47
gb|CK120179.1|CK120179 208i15.p1 AtM1 Arabidopsis thaliana ... 40 0.47
gb|CK122003.1|CK122003 211i17.p1 AtM1 Arabidopsis thaliana ... 40 0.47
gb|BP564445.1|BP564445 BP564445 RAFL14 Arabidopsis thaliana... 40 0.47
gb|BP567354.1|BP567354 BP567354 RAFL14 Arabidopsis thaliana... 40 0.47
gb|BP572102.1|BP572102 BP572102 RAFL14 Arabidopsis thaliana... 40 0.47
gb|BP575277.1|BP575277 BP575277 RAFL14 Arabidopsis thaliana... 40 0.47
gb|BP577242.1|BP577242 BP577242 RAFL14 Arabidopsis thaliana... 40 0.47
gb|BP579709.1|BP579709 BP579709 RAFL14 Arabidopsis thaliana... 40 0.47
gb|BP581635.1|BP581635 BP581635 RAFL14 Arabidopsis thaliana... 40 0.47
gb|BP581650.1|BP581650 BP581650 RAFL14 Arabidopsis thaliana... 40 0.47
gb|BP584617.1|BP584617 BP584617 RAFL14 Arabidopsis thaliana... 40 0.47
gb|BP589573.1|BP589573 BP589573 RAFL15 Arabidopsis thaliana... 40 0.47
gb|BP799202.1|BP799202 BP799202 RAFL14 Arabidopsis thaliana... 40 0.47
gb|BP799929.1|BP799929 BP799929 RAFL14 Arabidopsis thaliana... 40 0.47
gb|BP803989.1|BP803989 BP803989 RAFL14 Arabidopsis thaliana... 40 0.47
gb|BP817204.1|BP817204 BP817204 RAFL19 Arabidopsis thaliana... 40 0.47
gb|BP818395.1|BP818395 BP818395 RAFL19 Arabidopsis thaliana... 40 0.47
gb|BP823198.1|BP823198 BP823198 RAFL19 Arabidopsis thaliana... 40 0.47
gb|BP839771.1|BP839771 BP839771 RAFL19 Arabidopsis thaliana... 40 0.47
gb|BP843283.1|BP843283 BP843283 RAFL21 Arabidopsis thaliana... 40 0.47
gb|BP845665.1|BP845665 BP845665 RAFL21 Arabidopsis thaliana... 40 0.47
gb|BP849100.1|BP849100 BP849100 RAFL21 Arabidopsis thaliana... 40 0.47
gb|BP849300.1|BP849300 BP849300 RAFL21 Arabidopsis thaliana... 40 0.47
gb|BP860965.1|BP860965 BP860965 RAFL21 Arabidopsis thaliana... 40 0.47
gb|BP862651.1|BP862651 BP862651 RAFL21 Arabidopsis thaliana... 40 0.47
gb|Z18455.1|Z18455 ATTS0830 Grenoble-B Arabidopsis thaliana... 40 0.47
gb|AF370355.1| Arabidopsis thaliana putative protease inhib... 40 0.47
gb|AY074260.1| Arabidopsis thaliana At2g36420 mRNA sequence 40 0.47
emb|AX505922.1| Sequence 617 from Patent WO0216655 40 0.47
gb|BV007535.1| MASC_STS16445 Arabidopsis thaliana (Niederze... 40 0.47
gb|BV010732.1| MASC_STS16447 Arabidopsis thaliana (Guecking... 40 0.47
gb|BV010752.1| MASC_STS16454 Arabidopsis thaliana (Weininge... 40 0.47
gb|BV010756.1| MASC_STS16453 Arabidopsis thaliana (Landsber... 40 0.47
gb|BV010757.1| MASC_STS16452 Arabidopsis thaliana (Eifel-2 ... 40 0.47
gb|BV010758.1| MASC_STS16448 Arabidopsis thaliana (Lezoux/P... 40 0.47
gb|BV010759.1| MASC_STS16450 Arabidopsis thaliana (Koncheze... 40 0.47
gb|BV010760.1| MASC_STS16449 Arabidopsis thaliana (Cap Verd... 40 0.47
gb|BV010764.1| MASC_STS16455 Arabidopsis thaliana (Yosemite... 40 0.47
gb|AC005936.3| Arabidopsis thaliana chromosome 2 clone F5O4... 40 0.47
gb|AC006919.6| Arabidopsis thaliana chromosome 2 clone F1O1... 40 0.47
emb|BX819341.1|CNS0A7YA Arabidopsis thaliana Full-length cD... 40 0.47
emb|BX821506.1|CNS0A87W Arabidopsis thaliana Full-length cD... 40 0.47
emb|BX821920.1|CNS0A85P Arabidopsis thaliana Full-length cD... 40 0.47
emb|BX821097.1|CNS0A8AR Arabidopsis thaliana Full-length cD... 40 0.47
emb|X69139.1|ATPIIIA A.thaliana mRNA for protease inhibitor II 40 0.47
gb|AY803262.1| Arabidopsis thaliana isolate DEFL-3.2.2 defe... 40 0.47
ref|NM_129199.1| Arabidopsis thaliana unknown protein AT2G3... 40 0.47
ref|NM_126271.2| Arabidopsis thaliana LCR69/PDF2.2; proteas... 40 0.47
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 40 0.47
>emb|AL094414.1|CNS00X4G Arabidopsis thaliana genome survey sequence SP6 end of BAC T13C23
of TAMU library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 720
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 95 tggcacacgttggcgcagtt 114
>gb|BZ660566.1|BZ660566 SALK_024017.39.30.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_024017.39.30.x,
DNA sequence
Length = 481
Score = 40.1 bits (20), Expect = 0.47
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 491 gaggaggagcaggaggacgaggac 514
||||||||| ||||||||||||||
Sbjct: 259 gaggaggaggaggaggacgaggac 282
>gb|T04082.1|T04082 32 Lambda-PRL1 Arabidopsis thaliana cDNA clone SCC8T7P, mRNA
sequence
Length = 422
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 86 tggcacacgttggcgcagtt 67
>gb|T43215.1|T43215 6478 Lambda-PRL2 Arabidopsis thaliana cDNA clone 119C16T7, mRNA
sequence
Length = 370
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 148 tggcacacgttggcgcagtt 129
>gb|AA712335.1|AA712335 32063 Lambda-PRL2 Arabidopsis thaliana cDNA clone 190G10T7, mRNA
sequence
Length = 441
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 151 tggcacacgttggcgcagtt 132
>gb|AA712554.1|AA712554 31687 Lambda-PRL2 Arabidopsis thaliana cDNA clone 172H12T7, mRNA
sequence
Length = 382
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 180 tggcacacgttggcgcagtt 161
>gb|AA712693.1|AA712693 31826 Lambda-PRL2 Arabidopsis thaliana cDNA clone 178F24T7, mRNA
sequence
Length = 468
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 200 tggcacacgttggcgcagtt 181
>gb|H37692.1|H37692 15821 Lambda-PRL2 Arabidopsis thaliana cDNA clone 185C20T7, mRNA
sequence
Length = 239
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 180 tggcacacgttggcgcagtt 161
>gb|N37912.1|N37912 19139 Lambda-PRL2 Arabidopsis thaliana cDNA clone 213G20T7 3', mRNA
sequence
Length = 366
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 197 tggcacacgttggcgcagtt 178
>gb|T42542.1|T42542 5805 Lambda-PRL2 Arabidopsis thaliana cDNA clone 114A10T7, mRNA
sequence
Length = 459
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 197 tggcacacgttggcgcagtt 178
>gb|BE038877.1|BE038877 AB05D05 AB Arabidopsis thaliana cDNA 5' similar to proteinase
inhibitor ii, mRNA sequence
Length = 496
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 192 tggcacacgttggcgcagtt 173
>gb|AV783307.1|AV783307 AV783307 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-08-E12 3',
mRNA sequence
Length = 492
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 281 tggcacacgttggcgcagtt 300
>gb|AV819353.1|AV819353 AV819353 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-03-P09 3',
mRNA sequence
Length = 430
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 281 tggcacacgttggcgcagtt 300
>gb|AV821077.1|AV821077 AV821077 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-13-O18 3',
mRNA sequence
Length = 415
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 281 tggcacacgttggcgcagtt 300
>gb|AV822521.1|AV822521 AV822521 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-08-E12 5',
mRNA sequence
Length = 529
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 212 tggcacacgttggcgcagtt 193
>gb|AV824983.1|AV824983 AV824983 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-82-F11 5',
mRNA sequence
Length = 491
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 209 tggcacacgttggcgcagtt 190
>gb|CB261602.1|CB261602 94-E8881-008-014-L24-pBl2 MPIZ-ADIS-008 Arabidopsis thaliana cDNA
clone MPIZp767L2414Q 5-PRIME, mRNA sequence
Length = 426
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 70 tggcacacgttggcgcagtt 51
>gb|CB264677.1|CB264677 41-E015024-035-004-B12-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000B124Q 5-PRIME, mRNA sequence
Length = 471
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 197 tggcacacgttggcgcagtt 178
>gb|BX838516.1|BX838516 BX838516 Arabidopsis thaliana Flowers and buds Col-0 Arabidopsis
thaliana cDNA clone GSLTFB72ZE07 5PRIM, mRNA sequence
Length = 389
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 148 tggcacacgttggcgcagtt 129
>gb|AV535741.1|AV535741 AV535741 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB101d06F 3', mRNA sequence
Length = 424
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 283 tggcacacgttggcgcagtt 302
>gb|AV536145.1|AV536145 AV536145 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII0148F 3', mRNA
sequence
Length = 366
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 283 tggcacacgttggcgcagtt 302
>gb|AV549229.1|AV549229 AV549229 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ05a12R 5', mRNA sequence
Length = 379
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 190 tggcacacgttggcgcagtt 171
>gb|AV566360.1|AV566360 AV566360 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ241h04F 3', mRNA sequence
Length = 487
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 283 tggcacacgttggcgcagtt 302
>gb|AV566873.1|AV566873 AV566873 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQL02b10F 3', mRNA sequence
Length = 462
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 271 tggcacacgttggcgcagtt 290
>gb|CK117578.1|CK117578 215n16.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011N16215
5-PRIME, mRNA sequence
Length = 468
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 197 tggcacacgttggcgcagtt 178
>gb|CK119154.1|CK119154 214a18.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011A18214
5-PRIME, mRNA sequence
Length = 474
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 194 tggcacacgttggcgcagtt 175
>gb|CK119386.1|CK119386 201k20.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011K20201
5-PRIME, mRNA sequence
Length = 485
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 200 tggcacacgttggcgcagtt 181
>gb|CK120179.1|CK120179 208i15.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011I15208
5-PRIME, mRNA sequence
Length = 485
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 197 tggcacacgttggcgcagtt 178
>gb|CK122003.1|CK122003 211i17.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011I17211
5-PRIME, mRNA sequence
Length = 489
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 197 tggcacacgttggcgcagtt 178
>gb|BP564445.1|BP564445 BP564445 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-07-M08 3',
mRNA sequence
Length = 436
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 281 tggcacacgttggcgcagtt 300
>gb|BP567354.1|BP567354 BP567354 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-57-L06 3',
mRNA sequence
Length = 432
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 281 tggcacacgttggcgcagtt 300
>gb|BP572102.1|BP572102 BP572102 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-78-L13 3',
mRNA sequence
Length = 451
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 249 tggcacacgttggcgcagtt 268
>gb|BP575277.1|BP575277 BP575277 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-11-L19 3',
mRNA sequence
Length = 448
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 281 tggcacacgttggcgcagtt 300
>gb|BP577242.1|BP577242 BP577242 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-95-P05 3',
mRNA sequence
Length = 399
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 281 tggcacacgttggcgcagtt 300
>gb|BP579709.1|BP579709 BP579709 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-23-M23 3',
mRNA sequence
Length = 497
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 283 tggcacacgttggcgcagtt 302
>gb|BP581635.1|BP581635 BP581635 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-32-M14 3',
mRNA sequence
Length = 470
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 235 tggcacacgttggcgcagtt 254
>gb|BP581650.1|BP581650 BP581650 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-32-N10 3',
mRNA sequence
Length = 467
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 281 tggcacacgttggcgcagtt 300
>gb|BP584617.1|BP584617 BP584617 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-47-C18 3',
mRNA sequence
Length = 429
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 256 tggcacacgttggcgcagtt 275
>gb|BP589573.1|BP589573 BP589573 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-50-D23 3',
mRNA sequence
Length = 440
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 284 tggcacacgttggcgcagtt 303
>gb|BP799202.1|BP799202 BP799202 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-10-B14 5',
mRNA sequence
Length = 415
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 205 tggcacacgttggcgcagtt 186
>gb|BP799929.1|BP799929 BP799929 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-13-A12 5',
mRNA sequence
Length = 397
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 205 tggcacacgttggcgcagtt 186
>gb|BP803989.1|BP803989 BP803989 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-31-P07 5',
mRNA sequence
Length = 359
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 205 tggcacacgttggcgcagtt 186
>gb|BP817204.1|BP817204 BP817204 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-44-E10 5',
mRNA sequence
Length = 401
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 206 tggcacacgttggcgcagtt 187
>gb|BP818395.1|BP818395 BP818395 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-48-A03 5',
mRNA sequence
Length = 377
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 205 tggcacacgttggcgcagtt 186
>gb|BP823198.1|BP823198 BP823198 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-64-E16 5',
mRNA sequence
Length = 391
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 207 tggcacacgttggcgcagtt 188
>gb|BP839771.1|BP839771 BP839771 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-28-C05 5',
mRNA sequence
Length = 410
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 219 tggcacacgttggcgcagtt 200
>gb|BP843283.1|BP843283 BP843283 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-57-J12 5',
mRNA sequence
Length = 375
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 205 tggcacacgttggcgcagtt 186
>gb|BP845665.1|BP845665 BP845665 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-94-G17 5',
mRNA sequence
Length = 389
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 236 tggcacacgttggcgcagtt 217
>gb|BP849100.1|BP849100 BP849100 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-07-N13 5',
mRNA sequence
Length = 393
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 227 tggcacacgttggcgcagtt 208
>gb|BP849300.1|BP849300 BP849300 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-08-J22 5',
mRNA sequence
Length = 377
Score = 40.1 bits (20), Expect = 0.47
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 378 tggcacacgttggcgcagtt 397
||||||||||||||||||||
Sbjct: 366 tggcacacgttggcgcagtt 347
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 226,000
Number of Sequences: 1013581
Number of extensions: 226000
Number of successful extensions: 16293
Number of sequences better than 0.5: 77
Number of HSP's better than 0.5 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15976
Number of HSP's gapped (non-prelim): 317
length of query: 665
length of database: 908,940,872
effective HSP length: 20
effective length of query: 645
effective length of database: 888,669,252
effective search space: 573191667540
effective search space used: 573191667540
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)