BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437714.2.1
(1649 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|B77959.1|B77959 T29L16TR TAMU Arabidopsis thaliana genom... 74 9e-011
gb|AU238791.1|AU238791 AU238791 RAFL19 Arabidopsis thaliana... 74 9e-011
gb|AJ609355.1|AJ609355 AJ609355 Arabidopsis thaliana aerial... 74 9e-011
gb|AV550934.1|AV550934 AV550934 Arabidopsis thaliana roots ... 74 9e-011
gb|CK120262.1|CK120262 208d16.p1 AtM1 Arabidopsis thaliana ... 74 9e-011
emb|BX831068.1|CNS0A0N4 Arabidopsis thaliana Full-length cD... 74 9e-011
emb|BX832571.1|CNS0A0WM Arabidopsis thaliana Full-length cD... 74 9e-011
dbj|AK117952.1| Arabidopsis thaliana At5g01020 mRNA for put... 74 9e-011
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 74 9e-011
emb|AL137189.2|ATF7J8 Arabidopsis thaliana DNA chromosome 5... 74 9e-011
ref|NM_120179.2| Arabidopsis thaliana ATP binding / kinase/... 74 9e-011
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 74 9e-011
emb|AX507282.1| Sequence 1977 from Patent WO0216655 70 1e-009
gb|BT010769.1| Arabidopsis thaliana At2g26290 gene, complet... 70 1e-009
emb|BX819876.1|CNS0A80S Arabidopsis thaliana Full-length cD... 70 1e-009
gb|BT011654.1| Arabidopsis thaliana At2g26290 mRNA, complet... 70 1e-009
ref|NM_128186.1| Arabidopsis thaliana ATP binding / kinase/... 70 1e-009
gb|BU635172.1|BU635172 016F11 Infected Arabidopsis Leaf Ara... 64 8e-008
gb|CK119614.1|CK119614 211g15.p1 AtM1 Arabidopsis thaliana ... 64 8e-008
gb|T04321.1|T04321 368 Lambda-PRL2 Arabidopsis thaliana cDN... 58 5e-006
emb|BX824669.1|CNS0A5QX Arabidopsis thaliana Full-length cD... 58 5e-006
emb|BX824214.1|CNS0A7D1 Arabidopsis thaliana Full-length cD... 58 5e-006
dbj|AP000420.1| Arabidopsis thaliana genomic DNA, chromosom... 58 5e-006
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 58 5e-006
ref|NM_113789.3| Arabidopsis thaliana ATP binding / kinase/... 58 5e-006
ref|NM_001035713.1| Arabidopsis thaliana ATP binding / kina... 58 5e-006
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 58 5e-006
emb|BX822941.1|CNS0A79K Arabidopsis thaliana Full-length cD... 56 2e-005
gb|AI993345.1|AI993345 701496090 A. thaliana, Ohio State cl... 54 8e-005
gb|AY057584.1| Arabidopsis thaliana AT3g01300/T22N4_7 mRNA,... 54 8e-005
gb|AY087034.1| Arabidopsis thaliana clone 30775 mRNA, compl... 54 8e-005
emb|BX823669.1|CNS0A7UT Arabidopsis thaliana Full-length cD... 54 8e-005
dbj|AB023031.1| Arabidopsis thaliana genomic DNA, chromosom... 54 8e-005
emb|CQ804420.1| Sequence 831 from Patent WO2004035798 54 8e-005
dbj|AK221316.1| Arabidopsis thaliana mRNA for serine/threon... 54 8e-005
ref|NM_122949.1| Arabidopsis thaliana ATP binding / kinase/... 54 8e-005
ref|NM_110996.2| Arabidopsis thaliana ATP binding / kinase/... 54 8e-005
gb|AY062520.1| Arabidopsis thaliana serine/threonine specif... 52 3e-004
gb|BT002577.1| Arabidopsis thaliana serine/threonine specif... 52 3e-004
emb|BX830789.1|CNS09YQZ Arabidopsis thaliana Full-length cD... 52 3e-004
emb|BX831629.1|CNS09ZO6 Arabidopsis thaliana Full-length cD... 52 3e-004
ref|NM_121512.3| Arabidopsis thaliana ATP binding / kinase/... 52 3e-004
gb|CB074584.1|CB074584 EST02547 Early Ovule Development For... 50 0.001
gb|AC004392.1|F8K4 Arabidopsis thaliana chromosome 1 BAC F8... 50 0.001
gb|AC004484.3| Arabidopsis thaliana chromosome 2 clone T1D1... 50 0.001
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 50 0.001
ref|NM_104868.3| Arabidopsis thaliana ATP binding / kinase/... 50 0.001
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 50 0.001
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 50 0.001
gb|BP860122.1|BP860122 BP860122 RAFL21 Arabidopsis thaliana... 48 0.005
gb|CB262176.1|CB262176 72-E8863-008-010-P17-pBl2 MPIZ-ADIS-... 46 0.019
gb|AB015116.1|AB015116 AB015116 RIKEN-PMB-FL1 Arabidopsis t... 46 0.019
gb|BP842769.1|BP842769 BP842769 RAFL21 Arabidopsis thaliana... 46 0.019
gb|BP848471.1|BP848471 BP848471 RAFL21 Arabidopsis thaliana... 46 0.019
gb|U82401.1|ATU82401 Arabidopsis thaliana putative protein ... 46 0.019
gb|AQ959855.1|AQ959855 LEREN65TF LERE Arabidopsis thaliana ... 44 0.076
gb|BH911004.1|BH911004 SALK_064489.56.00.x Arabidopsis thal... 42 0.30
gb|BP830687.1|BP830687 BP830687 RAFL19 Arabidopsis thaliana... 42 0.30
gb|BP833138.1|BP833138 BP833138 RAFL19 Arabidopsis thaliana... 42 0.30
gb|BP842708.1|BP842708 BP842708 RAFL21 Arabidopsis thaliana... 42 0.30
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 42 0.30
gb|AC023628.3|AC023628 Arabidopsis thaliana chromosome I BA... 42 0.30
gb|AC015448.4|AC015448 Arabidopsis thaliana chromosome I BA... 42 0.30
emb|BX818954.1|CNS0A9XB Arabidopsis thaliana Full-length cD... 42 0.30
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 42 0.30
gb|AY735499.1| Arabidopsis thaliana hypothetical protein AT... 42 0.30
emb|AL080253.2|ATF9F13 Arabidopsis thaliana DNA chromosome ... 42 0.30
emb|AL021961.2|ATF28A23 Arabidopsis thaliana DNA chromosome... 42 0.30
emb|AL161553.2|ATCHRIV53 Arabidopsis thaliana DNA chromosom... 42 0.30
emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosom... 42 0.30
emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosom... 42 0.30
ref|NM_104066.1| Arabidopsis thaliana kinase AT1G51860 mRNA... 42 0.30
ref|NM_104067.1| Arabidopsis thaliana ATP binding / kinase/... 42 0.30
ref|NM_118164.2| Arabidopsis thaliana kinase AT4G20450 mRNA... 42 0.30
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 42 0.30
>gb|B77959.1|B77959 T29L16TR TAMU Arabidopsis thaliana genomic clone T29L16, DNA sequence
Length = 668
Score = 73.8 bits (37), Expect = 9e-011
Identities = 154/193 (79%)
Strand = Plus / Plus
Query: 1262 agttaacctcggtaagccattctctgtgcccttgatgtccatctttgttgagcaccttga 1321
|||| ||||| ||||||||||| | ||| || || |||| || ||||| || |||||||
Sbjct: 40 agttgacctctgtaagccattcacggtgaccctggagtccctccttgttaaggaccttga 99
Query: 1322 ctgcaacaggcagtgacttcagcccaaccctgacattttcatctatgtaacccttgtaaa 1381
| |||||||| || ||||| || || || | || ||| ||||| |||||||||||||| |
Sbjct: 100 cggcaacagggagagacttgaggccgacgcggagattgtcatcaatgtaacccttgtaga 159
Query: 1382 cggtcccaaatcctccttcgccaagaacataatcaacacggaagctctttgtgattgtct 1441
|||| || || || ||||| || || | |||||| ||||||||||| ||||| ||||
Sbjct: 160 cggtaccgaaaccaccttctccgagtatataatctgggcggaagctcttggtgatggtct 219
Query: 1442 ctagctcaaacaa 1454
| |||||||||||
Sbjct: 220 caagctcaaacaa 232
>gb|AU238791.1|AU238791 AU238791 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-14-C10 5',
mRNA sequence
Length = 630
Score = 73.8 bits (37), Expect = 9e-011
Identities = 154/193 (79%)
Strand = Plus / Minus
Query: 1262 agttaacctcggtaagccattctctgtgcccttgatgtccatctttgttgagcaccttga 1321
|||| ||||| ||||||||||| | ||| || || |||| || ||||| || |||||||
Sbjct: 520 agttgacctctgtaagccattcacggtgaccctggagtccctccttgttaaggaccttga 461
Query: 1322 ctgcaacaggcagtgacttcagcccaaccctgacattttcatctatgtaacccttgtaaa 1381
| |||||||| || ||||| || || || | || ||| ||||| |||||||||||||| |
Sbjct: 460 cggcaacagggagagacttgaggccgacgcggagattgtcatcaatgtaacccttgtaga 401
Query: 1382 cggtcccaaatcctccttcgccaagaacataatcaacacggaagctctttgtgattgtct 1441
|||| || || || ||||| || || | |||||| ||||||||||| ||||| ||||
Sbjct: 400 cggtaccgaaaccaccttctccgagtatataatctgggcggaagctcttggtgatggtct 341
Query: 1442 ctagctcaaacaa 1454
| |||||||||||
Sbjct: 340 caagctcaaacaa 328
>gb|AJ609355.1|AJ609355 AJ609355 Arabidopsis thaliana aerial vegetative tissues 4-weeks old
Arabidopsis thaliana cDNA clone a209A5 5', mRNA sequence
Length = 787
Score = 73.8 bits (37), Expect = 9e-011
Identities = 154/193 (79%)
Strand = Plus / Minus
Query: 1262 agttaacctcggtaagccattctctgtgcccttgatgtccatctttgttgagcaccttga 1321
|||| ||||| ||||||||||| | ||| || || |||| || ||||| || |||||||
Sbjct: 473 agttgacctctgtaagccattcacggtgaccctggagtccctccttgttaaggaccttga 414
Query: 1322 ctgcaacaggcagtgacttcagcccaaccctgacattttcatctatgtaacccttgtaaa 1381
| |||||||| || ||||| || || || | || ||| ||||| |||||||||||||| |
Sbjct: 413 cggcaacagggagagacttgaggccgacgcggagattgtcatcaatgtaacccttgtaga 354
Query: 1382 cggtcccaaatcctccttcgccaagaacataatcaacacggaagctctttgtgattgtct 1441
|||| || || || ||||| || || | |||||| ||||||||||| ||||| ||||
Sbjct: 353 cggtaccgaaaccaccttctccgagtatataatctgggcggaagctcttggtgatggtct 294
Query: 1442 ctagctcaaacaa 1454
| |||||||||||
Sbjct: 293 caagctcaaacaa 281
>gb|AV550934.1|AV550934 AV550934 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ119d10R 5', mRNA sequence
Length = 549
Score = 73.8 bits (37), Expect = 9e-011
Identities = 154/193 (79%)
Strand = Plus / Minus
Query: 1262 agttaacctcggtaagccattctctgtgcccttgatgtccatctttgttgagcaccttga 1321
|||| ||||| ||||||||||| | ||| || || |||| || ||||| || |||||||
Sbjct: 471 agttgacctctgtaagccattcacggtgaccctggagtccctccttgttaaggaccttga 412
Query: 1322 ctgcaacaggcagtgacttcagcccaaccctgacattttcatctatgtaacccttgtaaa 1381
| |||||||| || ||||| || || || | || ||| ||||| |||||||||||||| |
Sbjct: 411 cggcaacagggagagacttgaggccgacgcggagattgtcatcaatgtaacccttgtaga 352
Query: 1382 cggtcccaaatcctccttcgccaagaacataatcaacacggaagctctttgtgattgtct 1441
|||| || || || ||||| || || | |||||| ||||||||||| ||||| ||||
Sbjct: 351 cggtaccgaaaccaccttctccgagtatataatctgggcggaagctcttggtgatggtct 292
Query: 1442 ctagctcaaacaa 1454
| |||||||||||
Sbjct: 291 caagctcaaacaa 279
>gb|CK120262.1|CK120262 208d16.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011D16208
5-PRIME, mRNA sequence
Length = 803
Score = 73.8 bits (37), Expect = 9e-011
Identities = 154/193 (79%)
Strand = Plus / Minus
Query: 1262 agttaacctcggtaagccattctctgtgcccttgatgtccatctttgttgagcaccttga 1321
|||| ||||| ||||||||||| | ||| || || |||| || ||||| || |||||||
Sbjct: 346 agttgacctctgtaagccattcacggtgaccctggagtccctccttgttaaggaccttga 287
Query: 1322 ctgcaacaggcagtgacttcagcccaaccctgacattttcatctatgtaacccttgtaaa 1381
| |||||||| || ||||| || || || | || ||| ||||| |||||||||||||| |
Sbjct: 286 cggcaacagggagagacttgaggccgacgcggagattgtcatcaatgtaacccttgtaga 227
Query: 1382 cggtcccaaatcctccttcgccaagaacataatcaacacggaagctctttgtgattgtct 1441
|||| || || || ||||| || || | |||||| ||||||||||| ||||| ||||
Sbjct: 226 cggtaccgaaaccaccttctccgagtatataatctgggcggaagctcttggtgatggtct 167
Query: 1442 ctagctcaaacaa 1454
| |||||||||||
Sbjct: 166 caagctcaaacaa 154
Score = 63.9 bits (32), Expect = 8e-008
Identities = 176/224 (78%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgt 927
|||||||| || |||||||||||||| ||||||||||| || || || ||||| || ||
Sbjct: 740 gtcaagtgtccagtcatcacatattctggggcagcatagccataagtacccataactcga 681
Query: 928 gtcgacacatgcgtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagt 987
|| || ||||| || | |||||| | || ||| |||| || | |||||| || || ||
Sbjct: 680 gttgatacatgggtttcatcaccctggggtccagctttagctaagccaaaatctgaaagc 621
Query: 988 ttggcagtataatcggagtccagcagaatgtttgatgtcttgaaatctctgtagatgacg 1047
||||| || || |||||||| ||||| || || || ||||||||||| || || || ||
Sbjct: 620 ttggcggtgtagtcggagtcaagcagtatattggaagtcttgaaatccctataaataacc 561
Query: 1048 ggcctttgagcgttgtggaggcaagcgagccctttagcggctcc 1091
|| |||| ||| ||||||||| |||| || ||||| || |||||
Sbjct: 560 ggtctttcagcattgtggaggaaagcaaggcctttcgcagctcc 517
>emb|BX831068.1|CNS0A0N4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS55ZC05 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1507
Score = 73.8 bits (37), Expect = 9e-011
Identities = 154/193 (79%)
Strand = Plus / Minus
Query: 1262 agttaacctcggtaagccattctctgtgcccttgatgtccatctttgttgagcaccttga 1321
|||| ||||| ||||||||||| | ||| || || |||| || ||||| || |||||||
Sbjct: 492 agttgacctctgtaagccattcacggtgaccctggagtccctccttgttaaggaccttga 433
Query: 1322 ctgcaacaggcagtgacttcagcccaaccctgacattttcatctatgtaacccttgtaaa 1381
| |||||||| || ||||| || || || | || ||| ||||| |||||||||||||| |
Sbjct: 432 cggcaacagggagagacttgaggccgacgcggagattgtcatcaatgtaacccttgtaga 373
Query: 1382 cggtcccaaatcctccttcgccaagaacataatcaacacggaagctctttgtgattgtct 1441
|||| || || || ||||| || || | |||||| ||||||||||| ||||| ||||
Sbjct: 372 cggtaccgaaaccaccttctccgagtatataatctgggcggaagctcttggtgatggtct 313
Query: 1442 ctagctcaaacaa 1454
| |||||||||||
Sbjct: 312 caagctcaaacaa 300
Score = 63.9 bits (32), Expect = 8e-008
Identities = 176/224 (78%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgt 927
|||||||| || |||||||||||||| ||||||||||| || || || ||||| || ||
Sbjct: 886 gtcaagtgtccagtcatcacatattctggggcagcatagccataagtacccataactcga 827
Query: 928 gtcgacacatgcgtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagt 987
|| || ||||| || | |||||| | || ||| |||| || | |||||| || || ||
Sbjct: 826 gttgatacatgggtttcatcaccctggggtccagctttagctaagccaaaatctgaaagc 767
Query: 988 ttggcagtataatcggagtccagcagaatgtttgatgtcttgaaatctctgtagatgacg 1047
||||| || || |||||||| ||||| || || || ||||||||||| || || || ||
Sbjct: 766 ttggcggtgtagtcggagtcaagcagtatattggaagtcttgaaatccctataaataacc 707
Query: 1048 ggcctttgagcgttgtggaggcaagcgagccctttagcggctcc 1091
|| |||| ||| ||||||||| |||| || ||||| || |||||
Sbjct: 706 ggtctttcagcattgtggaggaaagcaaggcctttcgcagctcc 663
>emb|BX832571.1|CNS0A0WM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH81ZB04 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1578
Score = 73.8 bits (37), Expect = 9e-011
Identities = 154/193 (79%)
Strand = Plus / Minus
Query: 1262 agttaacctcggtaagccattctctgtgcccttgatgtccatctttgttgagcaccttga 1321
|||| ||||| ||||||||||| | ||| || || |||| || ||||| || |||||||
Sbjct: 491 agttgacctctgtaagccattcacggtgaccctggagtccctccttgttaaggaccttga 432
Query: 1322 ctgcaacaggcagtgacttcagcccaaccctgacattttcatctatgtaacccttgtaaa 1381
| |||||||| || ||||| || || || | || ||| ||||| |||||||||||||| |
Sbjct: 431 cggcaacagggagagacttgaggccgacgcggagattgtcatcaatgtaacccttgtaga 372
Query: 1382 cggtcccaaatcctccttcgccaagaacataatcaacacggaagctctttgtgattgtct 1441
|||| || || || ||||| || || | |||||| ||||||||||| ||||| ||||
Sbjct: 371 cggtaccgaaaccaccttctccgagtatataatctgggcggaagctcttggtgatggtct 312
Query: 1442 ctagctcaaacaa 1454
| |||||||||||
Sbjct: 311 caagctcaaacaa 299
Score = 63.9 bits (32), Expect = 8e-008
Identities = 176/224 (78%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgt 927
|||||||| || |||||||||||||| ||||||||||| || || || ||||| || ||
Sbjct: 885 gtcaagtgtccagtcatcacatattctggggcagcatagccataagtacccataactcga 826
Query: 928 gtcgacacatgcgtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagt 987
|| || ||||| || | |||||| | || ||| |||| || | |||||| || || ||
Sbjct: 825 gttgatacatgggtttcatcaccctggggtccagctttagctaagccaaaatctgaaagc 766
Query: 988 ttggcagtataatcggagtccagcagaatgtttgatgtcttgaaatctctgtagatgacg 1047
||||| || || |||||||| ||||| || || || ||||||||||| || || || ||
Sbjct: 765 ttggcggtgtagtcggagtcaagcagtatattggaagtcttgaaatccctataaataacc 706
Query: 1048 ggcctttgagcgttgtggaggcaagcgagccctttagcggctcc 1091
|| |||| ||| ||||||||| |||| || ||||| || |||||
Sbjct: 705 ggtctttcagcattgtggaggaaagcaaggcctttcgcagctcc 662
>dbj|AK117952.1| Arabidopsis thaliana At5g01020 mRNA for putative protein kinase,
complete cds, clone: RAFL19-14-C10
Length = 1778
Score = 73.8 bits (37), Expect = 9e-011
Identities = 154/193 (79%)
Strand = Plus / Minus
Query: 1262 agttaacctcggtaagccattctctgtgcccttgatgtccatctttgttgagcaccttga 1321
|||| ||||| ||||||||||| | ||| || || |||| || ||||| || |||||||
Sbjct: 520 agttgacctctgtaagccattcacggtgaccctggagtccctccttgttaaggaccttga 461
Query: 1322 ctgcaacaggcagtgacttcagcccaaccctgacattttcatctatgtaacccttgtaaa 1381
| |||||||| || ||||| || || || | || ||| ||||| |||||||||||||| |
Sbjct: 460 cggcaacagggagagacttgaggccgacgcggagattgtcatcaatgtaacccttgtaga 401
Query: 1382 cggtcccaaatcctccttcgccaagaacataatcaacacggaagctctttgtgattgtct 1441
|||| || || || ||||| || || | |||||| ||||||||||| ||||| ||||
Sbjct: 400 cggtaccgaaaccaccttctccgagtatataatctgggcggaagctcttggtgatggtct 341
Query: 1442 ctagctcaaacaa 1454
| |||||||||||
Sbjct: 340 caagctcaaacaa 328
Score = 63.9 bits (32), Expect = 8e-008
Identities = 176/224 (78%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgt 927
|||||||| || |||||||||||||| ||||||||||| || || || ||||| || ||
Sbjct: 914 gtcaagtgtccagtcatcacatattctggggcagcatagccataagtacccataactcga 855
Query: 928 gtcgacacatgcgtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagt 987
|| || ||||| || | |||||| | || ||| |||| || | |||||| || || ||
Sbjct: 854 gttgatacatgggtttcatcaccctggggtccagctttagctaagccaaaatctgaaagc 795
Query: 988 ttggcagtataatcggagtccagcagaatgtttgatgtcttgaaatctctgtagatgacg 1047
||||| || || |||||||| ||||| || || || ||||||||||| || || || ||
Sbjct: 794 ttggcggtgtagtcggagtcaagcagtatattggaagtcttgaaatccctataaataacc 735
Query: 1048 ggcctttgagcgttgtggaggcaagcgagccctttagcggctcc 1091
|| |||| ||| ||||||||| |||| || ||||| || |||||
Sbjct: 734 ggtctttcagcattgtggaggaaagcaaggcctttcgcagctcc 691
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 73.8 bits (37), Expect = 9e-011
Identities = 154/193 (79%)
Strand = Plus / Plus
Query: 1262 agttaacctcggtaagccattctctgtgcccttgatgtccatctttgttgagcaccttga 1321
|||| ||||| ||||||||||| | ||| || || |||| || ||||| || |||||||
Sbjct: 7384 agttgacctctgtaagccattcacggtgaccctggagtccctccttgttaaggaccttga 7443
Query: 1322 ctgcaacaggcagtgacttcagcccaaccctgacattttcatctatgtaacccttgtaaa 1381
| |||||||| || ||||| || || || | || ||| ||||| |||||||||||||| |
Sbjct: 7444 cggcaacagggagagacttgaggccgacgcggagattgtcatcaatgtaacccttgtaga 7503
Query: 1382 cggtcccaaatcctccttcgccaagaacataatcaacacggaagctctttgtgattgtct 1441
|||| || || || ||||| || || | |||||| ||||||||||| ||||| ||||
Sbjct: 7504 cggtaccgaaaccaccttctccgagtatataatctgggcggaagctcttggtgatggtct 7563
Query: 1442 ctagctcaaacaa 1454
| |||||||||||
Sbjct: 7564 caagctcaaacaa 7576
Score = 54.0 bits (27), Expect = 8e-005
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 1207 tcgcagcaatatccgatcaacttcaccaaatttggatgc 1245
||||||||||||||||||| |||||||| ||| ||||||
Sbjct: 12805892 tcgcagcaatatccgatcagcttcaccagattcggatgc 12805854
Score = 44.1 bits (22), Expect = 0.076
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 880 gtcatcacatattcaggggcagcata 905
|||||||||||||| |||||||||||
Sbjct: 6770 gtcatcacatattctggggcagcata 6795
>emb|AL137189.2|ATF7J8 Arabidopsis thaliana DNA chromosome 5, BAC clone F7J8 (ESSA project)
Length = 118507
Score = 73.8 bits (37), Expect = 9e-011
Identities = 154/193 (79%)
Strand = Plus / Plus
Query: 1262 agttaacctcggtaagccattctctgtgcccttgatgtccatctttgttgagcaccttga 1321
|||| ||||| ||||||||||| | ||| || || |||| || ||||| || |||||||
Sbjct: 3245 agttgacctctgtaagccattcacggtgaccctggagtccctccttgttaaggaccttga 3304
Query: 1322 ctgcaacaggcagtgacttcagcccaaccctgacattttcatctatgtaacccttgtaaa 1381
| |||||||| || ||||| || || || | || ||| ||||| |||||||||||||| |
Sbjct: 3305 cggcaacagggagagacttgaggccgacgcggagattgtcatcaatgtaacccttgtaga 3364
Query: 1382 cggtcccaaatcctccttcgccaagaacataatcaacacggaagctctttgtgattgtct 1441
|||| || || || ||||| || || | |||||| ||||||||||| ||||| ||||
Sbjct: 3365 cggtaccgaaaccaccttctccgagtatataatctgggcggaagctcttggtgatggtct 3424
Query: 1442 ctagctcaaacaa 1454
| |||||||||||
Sbjct: 3425 caagctcaaacaa 3437
Score = 44.1 bits (22), Expect = 0.076
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 880 gtcatcacatattcaggggcagcata 905
|||||||||||||| |||||||||||
Sbjct: 2631 gtcatcacatattctggggcagcata 2656
>ref|NM_120179.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
serine/threonine kinase/ protein-tyrosine kinase
AT5G01020 mRNA, complete cds
Length = 1799
Score = 73.8 bits (37), Expect = 9e-011
Identities = 154/193 (79%)
Strand = Plus / Minus
Query: 1262 agttaacctcggtaagccattctctgtgcccttgatgtccatctttgttgagcaccttga 1321
|||| ||||| ||||||||||| | ||| || || |||| || ||||| || |||||||
Sbjct: 541 agttgacctctgtaagccattcacggtgaccctggagtccctccttgttaaggaccttga 482
Query: 1322 ctgcaacaggcagtgacttcagcccaaccctgacattttcatctatgtaacccttgtaaa 1381
| |||||||| || ||||| || || || | || ||| ||||| |||||||||||||| |
Sbjct: 481 cggcaacagggagagacttgaggccgacgcggagattgtcatcaatgtaacccttgtaga 422
Query: 1382 cggtcccaaatcctccttcgccaagaacataatcaacacggaagctctttgtgattgtct 1441
|||| || || || ||||| || || | |||||| ||||||||||| ||||| ||||
Sbjct: 421 cggtaccgaaaccaccttctccgagtatataatctgggcggaagctcttggtgatggtct 362
Query: 1442 ctagctcaaacaa 1454
| |||||||||||
Sbjct: 361 caagctcaaacaa 349
Score = 63.9 bits (32), Expect = 8e-008
Identities = 176/224 (78%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgt 927
|||||||| || |||||||||||||| ||||||||||| || || || ||||| || ||
Sbjct: 935 gtcaagtgtccagtcatcacatattctggggcagcatagccataagtacccataactcga 876
Query: 928 gtcgacacatgcgtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagt 987
|| || ||||| || | |||||| | || ||| |||| || | |||||| || || ||
Sbjct: 875 gttgatacatgggtttcatcaccctggggtccagctttagctaagccaaaatctgaaagc 816
Query: 988 ttggcagtataatcggagtccagcagaatgtttgatgtcttgaaatctctgtagatgacg 1047
||||| || || |||||||| ||||| || || || ||||||||||| || || || ||
Sbjct: 815 ttggcggtgtagtcggagtcaagcagtatattggaagtcttgaaatccctataaataacc 756
Query: 1048 ggcctttgagcgttgtggaggcaagcgagccctttagcggctcc 1091
|| |||| ||| ||||||||| |||| || ||||| || |||||
Sbjct: 755 ggtctttcagcattgtggaggaaagcaaggcctttcgcagctcc 712
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 73.8 bits (37), Expect = 9e-011
Identities = 154/193 (79%)
Strand = Plus / Plus
Query: 1262 agttaacctcggtaagccattctctgtgcccttgatgtccatctttgttgagcaccttga 1321
|||| ||||| ||||||||||| | ||| || || |||| || ||||| || |||||||
Sbjct: 7827 agttgacctctgtaagccattcacggtgaccctggagtccctccttgttaaggaccttga 7886
Query: 1322 ctgcaacaggcagtgacttcagcccaaccctgacattttcatctatgtaacccttgtaaa 1381
| |||||||| || ||||| || || || | || ||| ||||| |||||||||||||| |
Sbjct: 7887 cggcaacagggagagacttgaggccgacgcggagattgtcatcaatgtaacccttgtaga 7946
Query: 1382 cggtcccaaatcctccttcgccaagaacataatcaacacggaagctctttgtgattgtct 1441
|||| || || || ||||| || || | |||||| ||||||||||| ||||| ||||
Sbjct: 7947 cggtaccgaaaccaccttctccgagtatataatctgggcggaagctcttggtgatggtct 8006
Query: 1442 ctagctcaaacaa 1454
| |||||||||||
Sbjct: 8007 caagctcaaacaa 8019
Score = 54.0 bits (27), Expect = 8e-005
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 1207 tcgcagcaatatccgatcaacttcaccaaatttggatgc 1245
||||||||||||||||||| |||||||| ||| ||||||
Sbjct: 13779747 tcgcagcaatatccgatcagcttcaccagattcggatgc 13779709
Score = 44.1 bits (22), Expect = 0.076
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 880 gtcatcacatattcaggggcagcata 905
|||||||||||||| |||||||||||
Sbjct: 7213 gtcatcacatattctggggcagcata 7238
>emb|AX507282.1| Sequence 1977 from Patent WO0216655
Length = 1275
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgt 927
||||| ||||| ||||| | |||||| || ||||||||||| | ||||||||||| ||
Sbjct: 818 gtcaaatgaccagtcatgatatattcgggcgcagcataaccttgtgttcccatcactcgg 759
Query: 928 gtcgacacatgcgtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagt 987
|| | |||||||| || || |||||||| |||||||| || || || |||||||| | |
Sbjct: 758 gtagttacatgcgtatgttcgccttcaggtccatctttggctagaccgaagtcagataat 699
Query: 988 ttggcagtataatcggagtccagcagaatgtttgatgtcttgaaatctctgtagatgac 1046
||||| |||| |||||||| | || ||||| || || || || ||||||||||||||
Sbjct: 698 ttggcgttatagtcggagtctaacaatatgttagaggttttaaagtctctgtagatgac 640
>gb|BT010769.1| Arabidopsis thaliana At2g26290 gene, complete cds
Length = 977
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgt 927
||||| ||||| ||||| | |||||| || ||||||||||| | ||||||||||| ||
Sbjct: 420 gtcaaatgaccagtcatgatatattcgggcgcagcataaccttgtgttcccatcactcgg 361
Query: 928 gtcgacacatgcgtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagt 987
|| | |||||||| || || |||||||| |||||||| || || || |||||||| | |
Sbjct: 360 gtagttacatgcgtatgttcgccttcaggtccatctttggctagaccgaagtcagataat 301
Query: 988 ttggcagtataatcggagtccagcagaatgtttgatgtcttgaaatctctgtagatgac 1046
||||| |||| |||||||| | || ||||| || || || || ||||||||||||||
Sbjct: 300 ttggcgttatagtcggagtctaacaatatgttagaggttttaaagtctctgtagatgac 242
>emb|BX819876.1|CNS0A80S Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS41ZA05 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1111
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgt 927
||||| ||||| ||||| | |||||| || ||||||||||| | ||||||||||| ||
Sbjct: 479 gtcaaatgaccagtcatgatatattcgggcgcagcataaccttgtgttcccatcactcgg 420
Query: 928 gtcgacacatgcgtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagt 987
|| | |||||||| || || |||||||| |||||||| || || || |||||||| | |
Sbjct: 419 gtagttacatgcgtatgttcgccttcaggtccatctttggctagaccgaagtcagataat 360
Query: 988 ttggcagtataatcggagtccagcagaatgtttgatgtcttgaaatctctgtagatgac 1046
||||| |||| |||||||| | || ||||| || || || || ||||||||||||||
Sbjct: 359 ttggcgttatagtcggagtctaacaatatgttagaggttttaaagtctctgtagatgac 301
>gb|BT011654.1| Arabidopsis thaliana At2g26290 mRNA, complete cds
Length = 765
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgt 927
||||| ||||| ||||| | |||||| || ||||||||||| | ||||||||||| ||
Sbjct: 308 gtcaaatgaccagtcatgatatattcgggcgcagcataaccttgtgttcccatcactcgg 249
Query: 928 gtcgacacatgcgtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagt 987
|| | |||||||| || || |||||||| |||||||| || || || |||||||| | |
Sbjct: 248 gtagttacatgcgtatgttcgccttcaggtccatctttggctagaccgaagtcagataat 189
Query: 988 ttggcagtataatcggagtccagcagaatgtttgatgtcttgaaatctctgtagatgac 1046
||||| |||| |||||||| | || ||||| || || || || ||||||||||||||
Sbjct: 188 ttggcgttatagtcggagtctaacaatatgttagaggttttaaagtctctgtagatgac 130
>ref|NM_128186.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
serine/threonine kinase/ protein-tyrosine kinase
AT2G26290 mRNA, complete cds
Length = 1275
Score = 69.9 bits (35), Expect = 1e-009
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgt 927
||||| ||||| ||||| | |||||| || ||||||||||| | ||||||||||| ||
Sbjct: 818 gtcaaatgaccagtcatgatatattcgggcgcagcataaccttgtgttcccatcactcgg 759
Query: 928 gtcgacacatgcgtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagt 987
|| | |||||||| || || |||||||| |||||||| || || || |||||||| | |
Sbjct: 758 gtagttacatgcgtatgttcgccttcaggtccatctttggctagaccgaagtcagataat 699
Query: 988 ttggcagtataatcggagtccagcagaatgtttgatgtcttgaaatctctgtagatgac 1046
||||| |||| |||||||| | || ||||| || || || || ||||||||||||||
Sbjct: 698 ttggcgttatagtcggagtctaacaatatgttagaggttttaaagtctctgtagatgac 640
>gb|BU635172.1|BU635172 016F11 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 692
Score = 63.9 bits (32), Expect = 8e-008
Identities = 176/224 (78%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgt 927
|||||||| || |||||||||||||| ||||||||||| || || || ||||| || ||
Sbjct: 351 gtcaagtgtccagtcatcacatattctggggcagcatagccataagtacccataactcga 292
Query: 928 gtcgacacatgcgtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagt 987
|| || ||||| || | |||||| | || ||| |||| || | |||||| || || ||
Sbjct: 291 gttgatacatgggtttcatcaccctggggtccagctttagctaagccaaaatctgaaagc 232
Query: 988 ttggcagtataatcggagtccagcagaatgtttgatgtcttgaaatctctgtagatgacg 1047
||||| || || |||||||| ||||| || || || ||||||||||| || || || ||
Sbjct: 231 ttggcggtgtagtcggagtcaagcagtatattggaagtcttgaaatccctataaataacc 172
Query: 1048 ggcctttgagcgttgtggaggcaagcgagccctttagcggctcc 1091
|| |||| ||| ||||||||| |||| || ||||| || |||||
Sbjct: 171 ggtctttcagcattgtggaggaaagcaaggcctttcgcagctcc 128
>gb|CK119614.1|CK119614 211g15.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011G15211
5-PRIME, mRNA sequence
Length = 526
Score = 63.9 bits (32), Expect = 8e-008
Identities = 176/224 (78%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgt 927
|||||||| || |||||||||||||| ||||||||||| || || || ||||| || ||
Sbjct: 238 gtcaagtgtccagtcatcacatattctggggcagcatagccataagtacccataactcga 179
Query: 928 gtcgacacatgcgtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagt 987
|| || ||||| || | |||||| | || ||| |||| || | |||||| || || ||
Sbjct: 178 gttgatacatgggtttcatcaccctggggtccagctttagctaagccaaaatctgaaagc 119
Query: 988 ttggcagtataatcggagtccagcagaatgtttgatgtcttgaaatctctgtagatgacg 1047
||||| || || |||||||| ||||| || || || ||||||||||| || || || ||
Sbjct: 118 ttggcggtgtagtcggagtcaagcagtatattggaagtcttgaaatccctataaataacc 59
Query: 1048 ggcctttgagcgttgtggaggcaagcgagccctttagcggctcc 1091
|| |||| ||| ||||||||| |||| || ||||| || |||||
Sbjct: 58 ggtctttcagcattgtggaggaaagcaaggcctttcgcagctcc 15
>gb|T04321.1|T04321 368 Lambda-PRL2 Arabidopsis thaliana cDNA clone 37E7T7, mRNA
sequence
Length = 400
Score = 58.0 bits (29), Expect = 5e-006
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccat 920
||||| ||||||||||||||||||||||| || ||||||||
Sbjct: 273 gtcattacatattcaggggcagcataaccataagttcccat 233
>emb|BX824669.1|CNS0A5QX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH63ZD06 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1497
Score = 58.0 bits (29), Expect = 5e-006
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccat 920
||||| ||||||||||||||||||||||| || ||||||||
Sbjct: 707 gtcattacatattcaggggcagcataaccataagttcccat 667
>emb|BX824214.1|CNS0A7D1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH30ZC07 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2419
Score = 58.0 bits (29), Expect = 5e-006
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccat 920
||||| ||||||||||||||||||||||| || ||||||||
Sbjct: 1590 gtcattacatattcaggggcagcataaccataagttcccat 1550
>dbj|AP000420.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MZN14
Length = 82890
Score = 58.0 bits (29), Expect = 5e-006
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccat 920
||||| ||||||||||||||||||||||| || ||||||||
Sbjct: 59475 gtcattacatattcaggggcagcataaccataagttcccat 59435
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 58.0 bits (29), Expect = 5e-006
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccat 920
||||| ||||||||||||||||||||||| || ||||||||
Sbjct: 10681239 gtcattacatattcaggggcagcataaccataagttcccat 10681199
>ref|NM_113789.3| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
serine/threonine kinase/ protein-tyrosine kinase
AT3G28690 transcript variant AT3G28690.1 mRNA, complete
cds
Length = 2468
Score = 58.0 bits (29), Expect = 5e-006
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccat 920
||||| ||||||||||||||||||||||| || ||||||||
Sbjct: 1592 gtcattacatattcaggggcagcataaccataagttcccat 1552
>ref|NM_001035713.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
serine/threonine kinase/ protein-tyrosine kinase
AT3G28690 transcript variant AT3G28690.2 mRNA, complete
cds
Length = 1710
Score = 58.0 bits (29), Expect = 5e-006
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccat 920
||||| ||||||||||||||||||||||| || ||||||||
Sbjct: 834 gtcattacatattcaggggcagcataaccataagttcccat 794
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 58.0 bits (29), Expect = 5e-006
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccat 920
||||| ||||||||||||||||||||||| || ||||||||
Sbjct: 10758145 gtcattacatattcaggggcagcataaccataagttcccat 10758105
>emb|BX822941.1|CNS0A79K Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB74ZE12 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1509
Score = 56.0 bits (28), Expect = 2e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 871 aagtgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgtgtc 930
|||||||||||||| ||||| || |||||||| ||||| || || |||||||| || ||
Sbjct: 826 aagtgaccggtcattacatactcgggggcagcgtaaccataagtgcccatcactcgagta 767
Query: 931 gacacatg 938
||||||||
Sbjct: 766 gacacatg 759
>gb|AI993345.1|AI993345 701496090 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701496090, mRNA sequence
Length = 529
Score = 54.0 bits (27), Expect = 8e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgt 927
||||||||||||||||| ||||| || |||||||| ||||| || || ||||| || ||
Sbjct: 260 gtcaagtgaccggtcattacatactcgggggcagcgtaaccataagtgcccatgactcga 201
Query: 928 gtcgacacatg 938
|| ||||||||
Sbjct: 200 gtagacacatg 190
>gb|AY057584.1| Arabidopsis thaliana AT3g01300/T22N4_7 mRNA, complete cds
Length = 1841
Score = 54.0 bits (27), Expect = 8e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgt 927
||||||||||||||||| ||||| || |||||||| ||||| || || ||||| || ||
Sbjct: 1120 gtcaagtgaccggtcattacatactcgggggcagcgtaaccataagtgcccatgactcga 1061
Query: 928 gtcgacacatg 938
|| ||||||||
Sbjct: 1060 gtagacacatg 1050
>gb|AY087034.1| Arabidopsis thaliana clone 30775 mRNA, complete sequence
Length = 1923
Score = 54.0 bits (27), Expect = 8e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgt 927
||||||||||||||||| ||||| || |||||||| ||||| || || ||||| || ||
Sbjct: 1221 gtcaagtgaccggtcattacatactcgggggcagcgtaaccataagtgcccatgactcga 1162
Query: 928 gtcgacacatg 938
|| ||||||||
Sbjct: 1161 gtagacacatg 1151
>emb|BX823669.1|CNS0A7UT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS64ZG09 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1887
Score = 54.0 bits (27), Expect = 8e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgt 927
||||||||||||||||| ||||| || |||||||| ||||| || || ||||| || ||
Sbjct: 1212 gtcaagtgaccggtcattacatactcgggggcagcgtaaccataagtgcccatgactcga 1153
Query: 928 gtcgacacatg 938
|| ||||||||
Sbjct: 1152 gtagacacatg 1142
>dbj|AB023031.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2K18
Length = 41465
Score = 54.0 bits (27), Expect = 8e-005
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 1207 tcgcagcaatatccgatcaacttcaccaaatttggatgc 1245
||||||||||||||||||| |||||||| ||| ||||||
Sbjct: 13874 tcgcagcaatatccgatcagcttcaccagattcggatgc 13836
>emb|CQ804420.1| Sequence 831 from Patent WO2004035798
Length = 1473
Score = 54.0 bits (27), Expect = 8e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgt 927
||||||||||||||||| ||||| || |||||||| ||||| || || ||||| || ||
Sbjct: 971 gtcaagtgaccggtcattacatactcgggggcagcgtaaccataagtgcccatgactcga 912
Query: 928 gtcgacacatg 938
|| ||||||||
Sbjct: 911 gtagacacatg 901
>dbj|AK221316.1| Arabidopsis thaliana mRNA for serine/threonine protein kinase-like,
complete cds, clone: RAFL25-10-E11
Length = 1593
Score = 54.0 bits (27), Expect = 8e-005
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 1207 tcgcagcaatatccgatcaacttcaccaaatttggatgc 1245
||||||||||||||||||| |||||||| ||| ||||||
Sbjct: 458 tcgcagcaatatccgatcagcttcaccagattcggatgc 420
>ref|NM_122949.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
serine/threonine kinase/ protein-tyrosine kinase
AT5G35580 mRNA, complete cds
Length = 1374
Score = 54.0 bits (27), Expect = 8e-005
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 1207 tcgcagcaatatccgatcaacttcaccaaatttggatgc 1245
||||||||||||||||||| |||||||| ||| ||||||
Sbjct: 479 tcgcagcaatatccgatcagcttcaccagattcggatgc 441
>ref|NM_110996.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
serine/threonine kinase/ protein-tyrosine kinase
AT3G01300 mRNA, complete cds
Length = 1942
Score = 54.0 bits (27), Expect = 8e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgt 927
||||||||||||||||| ||||| || |||||||| ||||| || || ||||| || ||
Sbjct: 1221 gtcaagtgaccggtcattacatactcgggggcagcgtaaccataagtgcccatgactcga 1162
Query: 928 gtcgacacatg 938
|| ||||||||
Sbjct: 1161 gtagacacatg 1151
>gb|AY062520.1| Arabidopsis thaliana serine/threonine specific protein kinase-like
(At5g15080; F2G14_200) mRNA, complete cds
Length = 1950
Score = 52.0 bits (26), Expect = 3e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcata 905
||||||||||||||||| |||||||| || ||||||||
Sbjct: 1275 gtcaagtgaccggtcattacatattcgggagcagcata 1238
>gb|BT002577.1| Arabidopsis thaliana serine/threonine specific protein kinase-like
(At5g15080) mRNA, complete cds
Length = 1529
Score = 52.0 bits (26), Expect = 3e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcata 905
||||||||||||||||| |||||||| || ||||||||
Sbjct: 989 gtcaagtgaccggtcattacatattcgggagcagcata 952
>emb|BX830789.1|CNS09YQZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS23ZC08 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1934
Score = 52.0 bits (26), Expect = 3e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcata 905
||||||||||||||||| |||||||| || ||||||||
Sbjct: 1219 gtcaagtgaccggtcattacatattcgggagcagcata 1182
>emb|BX831629.1|CNS09ZO6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH1ZD07 of Hormone Treated Callus of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1806
Score = 52.0 bits (26), Expect = 3e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcata 905
||||||||||||||||| |||||||| || ||||||||
Sbjct: 1187 gtcaagtgaccggtcattacatattcgggagcagcata 1150
>ref|NM_121512.3| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
serine/threonine kinase/ protein-tyrosine kinase
AT5G15080 mRNA, complete cds
Length = 2001
Score = 52.0 bits (26), Expect = 3e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 868 gtcaagtgaccggtcatcacatattcaggggcagcata 905
||||||||||||||||| |||||||| || ||||||||
Sbjct: 1275 gtcaagtgaccggtcattacatattcgggagcagcata 1238
>gb|CB074584.1|CB074584 EST02547 Early Ovule Development Forward Subtracted Library
Arabidopsis thaliana cDNA clone 1D4F2 similar to
putative protein kinase PK5, mRNA sequence
Length = 798
Score = 50.1 bits (25), Expect = 0.001
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 874 tgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgtgtcgac 933
|||||||||||| |||||||||||||| || ||||| |||||||| || | ||| |||
Sbjct: 199 tgaccggtcatcgcatattcaggggcacagtatccgtatgttcccatgactcttgtggac 140
Query: 934 acatg 938
|||||
Sbjct: 139 acatg 135
>gb|AC004392.1|F8K4 Arabidopsis thaliana chromosome 1 BAC F8K4 sequence, complete sequence
Length = 115641
Score = 50.1 bits (25), Expect = 0.001
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 874 tgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgtgtcgac 933
|||||||||||| |||||||||||||| || ||||| |||||||| || | ||| |||
Sbjct: 40489 tgaccggtcatcgcatattcaggggcacagtatccgtatgttcccatgactcttgtggac 40548
Query: 934 acatg 938
|||||
Sbjct: 40549 acatg 40553
>gb|AC004484.3| Arabidopsis thaliana chromosome 2 clone T1D16 map B68, complete
sequence
Length = 82212
Score = 50.1 bits (25), Expect = 0.001
Identities = 85/105 (80%)
Strand = Plus / Minus
Query: 888 atattcaggggcagcataaccgtaggttcccatcacccgtgtcgacacatgcgtctgatc 947
|||||| || ||||||||||| | ||||||||||| || || | |||||||| || ||
Sbjct: 27469 atattcgggcgcagcataaccttgtgttcccatcactcgggtagttacatgcgtatgttc 27410
Query: 948 accttcagggccatcttttgcgaggccaaagtcagacagtttggc 992
|||||||| |||||||| || || || |||||||| | ||||||
Sbjct: 27409 gccttcaggtccatctttggctagaccgaagtcagataatttggc 27365
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 50.1 bits (25), Expect = 0.001
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 874 tgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgtgtcgac 933
|||||||||||| |||||||||||||| || ||||| |||||||| || | ||| |||
Sbjct: 7104864 tgaccggtcatcgcatattcaggggcacagtatccgtatgttcccatgactcttgtggac 7104923
Query: 934 acatg 938
|||||
Sbjct: 7104924 acatg 7104928
Score = 42.1 bits (21), Expect = 0.30
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 841 ccgaagctgtacacgtcactc 861
|||||||||||||||||||||
Sbjct: 3622501 ccgaagctgtacacgtcactc 3622521
Score = 42.1 bits (21), Expect = 0.30
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 841 ccgaagctgtacacgtcactc 861
|||||||||||||||||||||
Sbjct: 3617256 ccgaagctgtacacgtcactc 3617276
>ref|NM_104868.3| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
serine/threonine kinase/ protein-tyrosine kinase
AT1G61860 mRNA, complete cds
Length = 1390
Score = 50.1 bits (25), Expect = 0.001
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 874 tgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgtgtcgac 933
|||||||||||| |||||||||||||| || ||||| |||||||| || | ||| |||
Sbjct: 794 tgaccggtcatcgcatattcaggggcacagtatccgtatgttcccatgactcttgtggac 735
Query: 934 acatg 938
|||||
Sbjct: 734 acatg 730
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 50.1 bits (25), Expect = 0.001
Identities = 85/105 (80%)
Strand = Plus / Plus
Query: 888 atattcaggggcagcataaccgtaggttcccatcacccgtgtcgacacatgcgtctgatc 947
|||||| || ||||||||||| | ||||||||||| || || | |||||||| || ||
Sbjct: 11199877 atattcgggcgcagcataaccttgtgttcccatcactcgggtagttacatgcgtatgttc 11199936
Query: 948 accttcagggccatcttttgcgaggccaaagtcagacagtttggc 992
|||||||| |||||||| || || || |||||||| | ||||||
Sbjct: 11199937 gccttcaggtccatctttggctagaccgaagtcagataatttggc 11199981
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 50.1 bits (25), Expect = 0.001
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 874 tgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgtgtcgac 933
|||||||||||| |||||||||||||| || ||||| |||||||| || | ||| |||
Sbjct: 22867213 tgaccggtcatcgcatattcaggggcacagtatccgtatgttcccatgactcttgtggac 22867272
Query: 934 acatg 938
|||||
Sbjct: 22867273 acatg 22867277
Score = 42.1 bits (21), Expect = 0.30
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 841 ccgaagctgtacacgtcactc 861
|||||||||||||||||||||
Sbjct: 19266906 ccgaagctgtacacgtcactc 19266926
Score = 42.1 bits (21), Expect = 0.30
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 841 ccgaagctgtacacgtcactc 861
|||||||||||||||||||||
Sbjct: 19261661 ccgaagctgtacacgtcactc 19261681
Score = 42.1 bits (21), Expect = 0.30
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 19 aaagcaaagcaaagcaaagca 39
|||||||||||||||||||||
Sbjct: 151056 aaagcaaagcaaagcaaagca 151076
Score = 42.1 bits (21), Expect = 0.30
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 19 aaagcaaagcaaagcaaagca 39
|||||||||||||||||||||
Sbjct: 151051 aaagcaaagcaaagcaaagca 151071
>gb|BP860122.1|BP860122 BP860122 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-43-C10 5',
mRNA sequence
Length = 369
Score = 48.1 bits (24), Expect = 0.005
Identities = 72/88 (81%)
Strand = Plus / Minus
Query: 1367 tgtaacccttgtaaacggtcccaaatcctccttcgccaagaacataatcaacacggaagc 1426
||||||||||||| ||||| || || || ||||| || || | |||||| |||||||
Sbjct: 369 tgtaacccttgtagacggtaccgaaaccaccttctccgagtatataatctgggcggaagc 310
Query: 1427 tctttgtgattgtctctagctcaaacaa 1454
|||| ||||| ||||| |||||||||||
Sbjct: 309 tcttggtgatggtctcaagctcaaacaa 282
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 632,274
Number of Sequences: 1013581
Number of extensions: 632274
Number of successful extensions: 52231
Number of sequences better than 0.5: 75
Number of HSP's better than 0.5 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47981
Number of HSP's gapped (non-prelim): 4171
length of query: 1649
length of database: 908,940,872
effective HSP length: 21
effective length of query: 1628
effective length of database: 887,655,671
effective search space: 1445103432388
effective search space used: 1445103432388
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)