BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2405010.2.1
(1644 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY042880.1| Arabidopsis thaliana similar to dihydroflavo... 256 1e-065
gb|BT001220.1| Arabidopsis thaliana similar to dihydroflavo... 256 1e-065
ref|NM_100694.2| Arabidopsis thaliana AXS2 (UDP-D-APIOSE/UD... 256 1e-065
gb|AY088462.1| Arabidopsis thaliana clone 6892 mRNA, comple... 234 4e-059
gb|BU635643.1|BU635643 026H09 Infected Arabidopsis Leaf Ara... 200 5e-049
gb|BP561046.1|BP561046 BP561046 RAFL5 Arabidopsis thaliana ... 192 1e-046
gb|BU635357.1|BU635357 021A04 Infected Arabidopsis Leaf Ara... 186 8e-045
gb|AY735589.1| Arabidopsis thaliana hypothetical protein AT... 172 1e-040
gb|CF652774.1|CF652774 75-L020580-066-004-F20-SP6P MPIZ-ADI... 168 2e-039
gb|AV552526.1|AV552526 AV552526 Arabidopsis thaliana roots ... 168 2e-039
gb|AF361574.1| Arabidopsis thaliana At2g27860/F15K20.4 mRNA... 168 2e-039
gb|BT001016.1| Arabidopsis thaliana At2g27860/F15K20.4 mRNA... 168 2e-039
gb|AY086830.1| Arabidopsis thaliana clone 28205 mRNA, compl... 168 2e-039
gb|AY442191.1| Arabidopsis thaliana UDP-D-apiose/UDP-D-xylo... 168 2e-039
emb|CQ806258.1| Sequence 2669 from Patent WO2004035798 168 2e-039
gb|AY924751.1| Arabidopsis thaliana hypothetical protein (A... 168 2e-039
ref|NM_128345.2| Arabidopsis thaliana AXS1 (UDP-D-APIOSE/UD... 168 2e-039
gb|AV519260.1|AV519260 AV519260 Arabidopsis thaliana aboveg... 149 2e-033
gb|AI992663.1|AI992663 701498317 A. thaliana, Ohio State cl... 145 3e-032
gb|CF651865.1|CF651865 19-L020577-066-004-E05-SP6P MPIZ-ADI... 145 3e-032
gb|CA781608.1|CA781608 028F05AF Infected Arabidopsis Leaf A... 141 4e-031
gb|AV536830.1|AV536830 AV536830 Arabidopsis thaliana liquid... 129 2e-027
gb|BP560667.1|BP560667 BP560667 RAFL4 Arabidopsis thaliana ... 129 2e-027
gb|Z38091.1|Z38091 ATTS4231 Versailles-VB Arabidopsis thali... 125 3e-026
gb|T22941.1|T22941 4949 Lambda-PRL2 Arabidopsis thaliana cD... 125 3e-026
gb|F13818.1|F13818 ATTS4740 Versailles-VB Arabidopsis thali... 115 3e-023
gb|AV552647.1|AV552647 AV552647 Arabidopsis thaliana roots ... 105 2e-020
gb|AV442601.1|AV442601 AV442601 Arabidopsis thaliana above-... 100 1e-018
gb|B08054.1|B08054 F19A23-Sp6.1 IGF Arabidopsis thaliana ge... 78 5e-012
gb|B27467.1|B27467 T8P12TF TAMU Arabidopsis thaliana genomi... 78 5e-012
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 78 5e-012
gb|AC011438.3|AC011438 Genomic sequence for Arabidopsis tha... 78 5e-012
gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K... 78 5e-012
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 78 5e-012
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 78 5e-012
gb|AV521251.1|AV521251 AV521251 Arabidopsis thaliana aboveg... 76 2e-011
gb|AV551332.1|AV551332 AV551332 Arabidopsis thaliana roots ... 76 2e-011
gb|T43628.1|T43628 6891 Lambda-PRL2 Arabidopsis thaliana cD... 68 5e-009
gb|AV782482.1|AV782482 AV782482 RAFL4 Arabidopsis thaliana ... 68 5e-009
gb|CB261664.1|CB261664 91-E9723-008-016-F23-pBl2 MPIZ-ADIS-... 68 5e-009
gb|CB256019.1|CB256019 06-E012744-027-007-L02-T7R MPIZ-ADIS... 66 2e-008
gb|CB257882.1|CB257882 95-E011797-014-004-M23-T7R MPIZ-ADIS... 66 2e-008
gb|CB257884.1|CB257884 95-E011801-014-004-M23-T7R MPIZ-ADIS... 66 2e-008
gb|CB258370.1|CB258370 32-E011082-014-003-P07-T7R MPIZ-ADIS... 62 3e-007
gb|CB262501.1|CB262501 58-E8975-008-017-C16-pBl2 MPIZ-ADIS-... 62 3e-007
gb|AV563008.1|AV563008 AV563008 Arabidopsis thaliana green ... 62 3e-007
gb|BP796435.1|BP796435 BP796435 RAFL5 Arabidopsis thaliana ... 62 3e-007
gb|R84049.1|R84049 16008 Lambda-PRL2 Arabidopsis thaliana c... 52 3e-004
gb|AQ249659.1|AQ249659 F19A23-Sp6.2 IGF Arabidopsis thalian... 50 0.001
emb|AL095446.1|CNS00XX4 Arabidopsis thaliana genome survey ... 50 0.001
gb|BZ377836.1|BZ377836 SALK_106285.26.70.x Arabidopsis thal... 46 0.019
gb|AA712188.1|AA712188 31916 Lambda-PRL2 Arabidopsis thalia... 46 0.019
gb|T20444.1|T20444 2452 Lambda-PRL2 Arabidopsis thaliana cD... 46 0.019
gb|AV806845.1|AV806845 AV806845 RAFL9 Arabidopsis thaliana ... 46 0.019
gb|AV538101.1|AV538101 AV538101 Arabidopsis thaliana roots ... 46 0.019
gb|AV544060.1|AV544060 AV544060 Arabidopsis thaliana roots ... 46 0.019
gb|AV544172.1|AV544172 AV544172 Arabidopsis thaliana roots ... 46 0.019
gb|BP575818.1|BP575818 BP575818 RAFL14 Arabidopsis thaliana... 46 0.019
gb|BP580003.1|BP580003 BP580003 RAFL14 Arabidopsis thaliana... 46 0.019
gb|BP582506.1|BP582506 BP582506 RAFL14 Arabidopsis thaliana... 46 0.019
gb|BP584741.1|BP584741 BP584741 RAFL14 Arabidopsis thaliana... 46 0.019
gb|AV795973.1|AV795973 AV795973 RAFL9 Arabidopsis thaliana ... 44 0.076
gb|BZ377837.1|BZ377837 SALK_106286.35.15.x Arabidopsis thal... 42 0.30
gb|AV540480.1|AV540480 AV540480 Arabidopsis thaliana roots ... 42 0.30
>gb|AY042880.1| Arabidopsis thaliana similar to dihydroflavonol reductase (T23G18.6)
mRNA, complete cds
Length = 1561
Score = 256 bits (129), Expect = 1e-065
Identities = 504/629 (80%)
Strand = Plus / Minus
Query: 600 acttcattgttcggattcccaacattgaagatgtggccattggctcgagcaggattttca 659
||||||||||| || || || ||||||||||| || |||||||||| | ||||||||
Sbjct: 971 acttcattgtttgggttgcctacattgaagatatgcccattggctctctctggattttcg 912
Query: 660 atcatcagcactacagcttcgatagcatccttgatgtagacaaaggttctctgagactga 719
||||||| | ||||||||||||||||| |||||||||| ||||||||||| || |
Sbjct: 911 atcatcaaaaggacagcttcgatagcatctttgatgtagatgaaggttctctgtgattct 852
Query: 720 cccccatcaacaagcttcaagggctctctccggagcagattgttactgaagcaagccaaa 779
|| ||||| |||||||| | ||||| | || || ||||||||||| ||||| || | |
Sbjct: 851 ccaccatccacaagcttgagaggctcccgtcgcagaagattgttactaaagcacgctaga 792
Query: 780 acccgaggcacaccctcgctaggaccatcgacaccaggaatgaaatccatccttggccca 839
||||| || |||||||||||||||||||| | ||||| |||||||||||||| || |||
Sbjct: 791 acccgtgggacaccctcgctaggaccatcaatgccagggatgaaatccatcctaggtcca 732
Query: 840 atccaattaaaaggtctcacgattgtgaattcaaggccattttctgcaccttcagcaaat 899
||||| || || ||||| || || ||||| || || ||||| || ||||| ||||| |
Sbjct: 731 atccagttgaatggtcttacaatggtgaactcgagtccattctcagcaccctcagcgtaa 672
Query: 900 acaagcctctcaataagttgcttcgcgcaagcataggaccatctttgtttcacgattgga 959
||||| ||||||||||||||||| || |||||||| ||||| || || ||| | |||| |
Sbjct: 671 acaagtctctcaataagttgctttgcacaagcatatgaccacctctgcttctcaattgaa 612
Query: 960 ccaaaaatacagggcgactcatcttctttaagaacataaaattcaggttccttgcggagc 1019
||||| || || || || ||||||||| || |||||||||||||| |||| || ||
Sbjct: 611 ccaaagatgcaaggggatatatcttctttgagtacataaaattcaggatcctgacgcaga 552
Query: 1020 gggtggtctttggggaggaagctgccgatggtcttgccatagacctcgcacgtggagaag 1079
|| || || || || || ||||| || || || || ||||| || || || ||||| |||
Sbjct: 551 ggatgatcctttggaagaaagcttcctatagtttttccatacacttcacaagtggaaaag 492
Query: 1080 tggatgagacgcttgctgttctcggagcagtacttgaccactgggagtgcatcgatgaag 1139
|| || ||||||||| ||||||| |||||||| || ||||||||||| ||||| |||||
Sbjct: 491 tgaatcagacgcttgttgttctctgagcagtatttaaccactgggagagcatcaatgaaa 432
Query: 1140 ttgctgtagatggtgtcaagggggcgagtgttgtagtccgccggcgtgcagatagccgcc 1199
||||||||||| |||||||| || || || ||||| || || || || ||||| || ||
Sbjct: 431 ttgctgtagatagtgtcaagaggacgcgtattgtaatctgctggagtacagatcgcagct 372
Query: 1200 aggttgatggtcagatcggccatcttgat 1228
|| || || |||||||| |||||||||||
Sbjct: 371 agatttatcgtcagatctgccatcttgat 343
Score = 46.1 bits (23), Expect = 0.019
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 440 gttgattatagtcatgtcggggatcctcttgtcgctatcatcgtatccttc 490
|||||| || |||||||| ||||| ||||||||||| ||||| || |||||
Sbjct: 1131 gttgatgatggtcatgtctgggattctcttgtcgctgtcatcataaccttc 1081
Score = 44.1 bits (22), Expect = 0.076
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1377 agcttctcgcagaggtgggagccgatgaagccgccggcgccaatcatgca 1426
|||||||||||||| || ||||| ||||| || ||||| || ||||||||
Sbjct: 194 agcttctcgcagagatgagagccaatgaaacctccggcaccgatcatgca 145
>gb|BT001220.1| Arabidopsis thaliana similar to dihydroflavonol reductase (At1g08200)
mRNA, complete cds
Length = 1212
Score = 256 bits (129), Expect = 1e-065
Identities = 504/629 (80%)
Strand = Plus / Minus
Query: 600 acttcattgttcggattcccaacattgaagatgtggccattggctcgagcaggattttca 659
||||||||||| || || || ||||||||||| || |||||||||| | ||||||||
Sbjct: 887 acttcattgtttgggttgcctacattgaagatatgcccattggctctctctggattttcg 828
Query: 660 atcatcagcactacagcttcgatagcatccttgatgtagacaaaggttctctgagactga 719
||||||| | ||||||||||||||||| |||||||||| ||||||||||| || |
Sbjct: 827 atcatcaaaaggacagcttcgatagcatctttgatgtagatgaaggttctctgtgattct 768
Query: 720 cccccatcaacaagcttcaagggctctctccggagcagattgttactgaagcaagccaaa 779
|| ||||| |||||||| | ||||| | || || ||||||||||| ||||| || | |
Sbjct: 767 ccaccatccacaagcttgagaggctcccgtcgcagaagattgttactaaagcacgctaga 708
Query: 780 acccgaggcacaccctcgctaggaccatcgacaccaggaatgaaatccatccttggccca 839
||||| || |||||||||||||||||||| | ||||| |||||||||||||| || |||
Sbjct: 707 acccgtgggacaccctcgctaggaccatcaatgccagggatgaaatccatcctaggtcca 648
Query: 840 atccaattaaaaggtctcacgattgtgaattcaaggccattttctgcaccttcagcaaat 899
||||| || || ||||| || || ||||| || || ||||| || ||||| ||||| |
Sbjct: 647 atccagttgaatggtcttacaatggtgaactcgagtccattctcagcaccctcagcgtaa 588
Query: 900 acaagcctctcaataagttgcttcgcgcaagcataggaccatctttgtttcacgattgga 959
||||| ||||||||||||||||| || |||||||| ||||| || || ||| | |||| |
Sbjct: 587 acaagtctctcaataagttgctttgcacaagcatatgaccacctctgcttctcaattgaa 528
Query: 960 ccaaaaatacagggcgactcatcttctttaagaacataaaattcaggttccttgcggagc 1019
||||| || || || || ||||||||| || |||||||||||||| |||| || ||
Sbjct: 527 ccaaagatgcaaggggatatatcttctttgagtacataaaattcaggatcctgacgcaga 468
Query: 1020 gggtggtctttggggaggaagctgccgatggtcttgccatagacctcgcacgtggagaag 1079
|| || || || || || ||||| || || || || ||||| || || || ||||| |||
Sbjct: 467 ggatgatcctttggaagaaagcttcctatagtttttccatacacttcacaagtggaaaag 408
Query: 1080 tggatgagacgcttgctgttctcggagcagtacttgaccactgggagtgcatcgatgaag 1139
|| || ||||||||| ||||||| |||||||| || ||||||||||| ||||| |||||
Sbjct: 407 tgaatcagacgcttgttgttctctgagcagtatttaaccactgggagagcatcaatgaaa 348
Query: 1140 ttgctgtagatggtgtcaagggggcgagtgttgtagtccgccggcgtgcagatagccgcc 1199
||||||||||| |||||||| || || || ||||| || || || || ||||| || ||
Sbjct: 347 ttgctgtagatagtgtcaagaggacgcgtattgtaatctgctggagtacagatcgcagct 288
Query: 1200 aggttgatggtcagatcggccatcttgat 1228
|| || || |||||||| |||||||||||
Sbjct: 287 agatttatcgtcagatctgccatcttgat 259
Score = 46.1 bits (23), Expect = 0.019
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 440 gttgattatagtcatgtcggggatcctcttgtcgctatcatcgtatccttc 490
|||||| || |||||||| ||||| ||||||||||| ||||| || |||||
Sbjct: 1047 gttgatgatggtcatgtctgggattctcttgtcgctgtcatcataaccttc 997
>ref|NM_100694.2| Arabidopsis thaliana AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2)
AT1G08200 (AXS2) mRNA, complete cds
Length = 1672
Score = 256 bits (129), Expect = 1e-065
Identities = 504/629 (80%)
Strand = Plus / Minus
Query: 600 acttcattgttcggattcccaacattgaagatgtggccattggctcgagcaggattttca 659
||||||||||| || || || ||||||||||| || |||||||||| | ||||||||
Sbjct: 990 acttcattgtttgggttgcctacattgaagatatgcccattggctctctctggattttcg 931
Query: 660 atcatcagcactacagcttcgatagcatccttgatgtagacaaaggttctctgagactga 719
||||||| | ||||||||||||||||| |||||||||| ||||||||||| || |
Sbjct: 930 atcatcaaaaggacagcttcgatagcatctttgatgtagatgaaggttctctgtgattct 871
Query: 720 cccccatcaacaagcttcaagggctctctccggagcagattgttactgaagcaagccaaa 779
|| ||||| |||||||| | ||||| | || || ||||||||||| ||||| || | |
Sbjct: 870 ccaccatccacaagcttgagaggctcccgtcgcagaagattgttactaaagcacgctaga 811
Query: 780 acccgaggcacaccctcgctaggaccatcgacaccaggaatgaaatccatccttggccca 839
||||| || |||||||||||||||||||| | ||||| |||||||||||||| || |||
Sbjct: 810 acccgtgggacaccctcgctaggaccatcaatgccagggatgaaatccatcctaggtcca 751
Query: 840 atccaattaaaaggtctcacgattgtgaattcaaggccattttctgcaccttcagcaaat 899
||||| || || ||||| || || ||||| || || ||||| || ||||| ||||| |
Sbjct: 750 atccagttgaatggtcttacaatggtgaactcgagtccattctcagcaccctcagcgtaa 691
Query: 900 acaagcctctcaataagttgcttcgcgcaagcataggaccatctttgtttcacgattgga 959
||||| ||||||||||||||||| || |||||||| ||||| || || ||| | |||| |
Sbjct: 690 acaagtctctcaataagttgctttgcacaagcatatgaccacctctgcttctcaattgaa 631
Query: 960 ccaaaaatacagggcgactcatcttctttaagaacataaaattcaggttccttgcggagc 1019
||||| || || || || ||||||||| || |||||||||||||| |||| || ||
Sbjct: 630 ccaaagatgcaaggggatatatcttctttgagtacataaaattcaggatcctgacgcaga 571
Query: 1020 gggtggtctttggggaggaagctgccgatggtcttgccatagacctcgcacgtggagaag 1079
|| || || || || || ||||| || || || || ||||| || || || ||||| |||
Sbjct: 570 ggatgatcctttggaagaaagcttcctatagtttttccatacacttcacaagtggaaaag 511
Query: 1080 tggatgagacgcttgctgttctcggagcagtacttgaccactgggagtgcatcgatgaag 1139
|| || ||||||||| ||||||| |||||||| || ||||||||||| ||||| |||||
Sbjct: 510 tgaatcagacgcttgttgttctctgagcagtatttaaccactgggagagcatcaatgaaa 451
Query: 1140 ttgctgtagatggtgtcaagggggcgagtgttgtagtccgccggcgtgcagatagccgcc 1199
||||||||||| |||||||| || || || ||||| || || || || ||||| || ||
Sbjct: 450 ttgctgtagatagtgtcaagaggacgcgtattgtaatctgctggagtacagatcgcagct 391
Query: 1200 aggttgatggtcagatcggccatcttgat 1228
|| || || |||||||| |||||||||||
Sbjct: 390 agatttatcgtcagatctgccatcttgat 362
Score = 46.1 bits (23), Expect = 0.019
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 440 gttgattatagtcatgtcggggatcctcttgtcgctatcatcgtatccttc 490
|||||| || |||||||| ||||| ||||||||||| ||||| || |||||
Sbjct: 1150 gttgatgatggtcatgtctgggattctcttgtcgctgtcatcataaccttc 1100
>gb|AY088462.1| Arabidopsis thaliana clone 6892 mRNA, complete sequence
Length = 1573
Score = 234 bits (118), Expect = 4e-059
Identities = 526/662 (79%)
Strand = Plus / Minus
Query: 600 acttcattgttcggattcccaacattgaagatgtggccattggctcgagcaggattttca 659
||||||||||| || || || ||||||||||| || |||||||||| | ||||||||
Sbjct: 989 acttcattgtttgggttgcctacattgaagatatgcccattggctctctctggattttcg 930
Query: 660 atcatcagcactacagcttcgatagcatccttgatgtagacaaaggttctctgagactga 719
||||||| | ||||||||||||||||| |||||||||| ||||||||||| || |
Sbjct: 929 atcatcaaaaggacagcttcgatagcatctttgatgtagatgaaggttctctgtgattct 870
Query: 720 cccccatcaacaagcttcaagggctctctccggagcagattgttactgaagcaagccaaa 779
|| ||||| |||||||| | ||||| | || || || |||||||| ||||| || | |
Sbjct: 869 ccaccatccacaagcttgagaggctcccgtcgcagaaggttgttactaaagcacgctaga 810
Query: 780 acccgaggcacaccctcgctaggaccatcgacaccaggaatgaaatccatccttggccca 839
||||| || ||||||||||| |||||||| | ||||| |||||||||||||| || |||
Sbjct: 809 acccgtgggacaccctcgctgggaccatcaatgccagggatgaaatccatcctaggtcca 750
Query: 840 atccaattaaaaggtctcacgattgtgaattcaaggccattttctgcaccttcagcaaat 899
||||| || || ||||| || || ||||| || || ||||| || ||||| ||||| |
Sbjct: 749 atccagttgaatggtctaacaatggtgaactcgagtccattctcagcaccctcagcgtaa 690
Query: 900 acaagcctctcaataagttgcttcgcgcaagcataggaccatctttgtttcacgattgga 959
||||| ||||| ||||||||||| || |||||||| ||||| || || ||| | |||| |
Sbjct: 689 acaagtctctctataagttgctttgcacaagcatatgaccacctctgcttctcaattgaa 630
Query: 960 ccaaaaatacagggcgactcatcttctttaagaacataaaattcaggttccttgcggagc 1019
||||| || || || || ||||||||| || |||||||||||||| || | || ||
Sbjct: 629 ccaaagatgcaaggggatatatcttctttgagtacataaaattcaggatcttgacgcaga 570
Query: 1020 gggtggtctttggggaggaagctgccgatggtcttgccatagacctcgcacgtggagaag 1079
|| || || || || || ||||| || || || || ||||| || || || ||||| |||
Sbjct: 569 ggatgatcctttggaagaaagcttcctatagtttttccatacacttcacaagtggaaaag 510
Query: 1080 tggatgagacgcttgctgttctcggagcagtacttgaccactgggagtgcatcgatgaag 1139
|| || ||||||||| ||||||| ||||||||||| ||||||||||| ||||| |||||
Sbjct: 509 tgaatcagacgcttgttgttctctgagcagtacttaaccactgggagagcatcaatgaaa 450
Query: 1140 ttgctgtagatggtgtcaagggggcgagtgttgtagtccgccggcgtgcagatagccgcc 1199
||||||||||| |||||||| || || || ||||| || || || || ||||| || ||
Sbjct: 449 ttgctgtagatagtgtcaagaggacgcgtattgtaatctgcgggagtacagatcgcagct 390
Query: 1200 aggttgatggtcagatcggccatcttgatgagcccctcgagcctggagtcattcttgatg 1259
|| || || |||||||| ||||||||||| || || ||||| || || |||| ||| |||
Sbjct: 389 agatttatcgtcagatctgccatcttgatcagtccttcgagtctagaatcatgcttaatg 330
Query: 1260 tt 1261
||
Sbjct: 329 tt 328
Score = 46.1 bits (23), Expect = 0.019
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 440 gttgattatagtcatgtcggggatcctcttgtcgctatcatcgtatccttc 490
|||||| || |||||||| ||||| ||||||||||| ||||| || |||||
Sbjct: 1149 gttgatgatggtcatgtctgggattctcttgtcgctgtcatcataaccttc 1099
>gb|BU635643.1|BU635643 026H09 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 712
Score = 200 bits (101), Expect = 5e-049
Identities = 380/473 (80%)
Strand = Plus / Minus
Query: 756 agattgttactgaagcaagccaaaacccgaggcacaccctcgctaggaccatcgacacca 815
||||||||||| ||||| || | |||||| || |||||||||||||||||||| | |||
Sbjct: 680 agattgttactaaagcacgctagaacccgtgggacaccctcgctaggaccatcaatgcca 621
Query: 816 ggaatgaaatccatccttggcccaatccaattaaaaggtctcacgattgtgaattcaagg 875
|| |||||||||||||| || |||||||| || || ||||| || || ||||| || ||
Sbjct: 620 gggatgaaatccatcctaggtccaatccagttgaatggtcttacaatggtgaactcgagt 561
Query: 876 ccattttctgcaccttcagcaaatacaagcctctcaataagttgcttcgcgcaagcatag 935
||||| || ||||| ||||| | ||||| ||||||||||||||||| || ||||||||
Sbjct: 560 ccattctcagcaccctcagcgtaaacaagtctctcaataagttgctttgcacaagcatat 501
Query: 936 gaccatctttgtttcacgattggaccaaaaatacagggcgactcatcttctttaagaaca 995
||||| || || ||| | |||| |||||| || || || || ||||||||| || |||
Sbjct: 500 gaccacctctgcttctcaattgaaccaaagatgcaaggggatatatcttctttgagtaca 441
Query: 996 taaaattcaggttccttgcggagcgggtggtctttggggaggaagctgccgatggtcttg 1055
||||||||||| |||| || || || || || || || || ||||| || || || ||
Sbjct: 440 taaaattcaggatcctgacgcagaggatgatcctttggaagaaagcttcctatagttttt 381
Query: 1056 ccatagacctcgcacgtggagaagtggatgagacgcttgctgttctcggagcagtacttg 1115
||||| || || || ||||| ||||| || ||||||||| ||||||| |||||||| ||
Sbjct: 380 ccatacacttcacaagtggaaaagtgaatcagacgcttgttgttctctgagcagtattta 321
Query: 1116 accactgggagtgcatcgatgaagttgctgtagatggtgtcaagggggcgagtgttgtag 1175
||||||||||| ||||| ||||| ||||||||||| |||||||| || || || |||||
Sbjct: 320 accactgggagagcatcaatgaaattgctgtagatagtgtcaagaggacgcgtattgtaa 261
Query: 1176 tccgccggcgtgcagatagccgccaggttgatggtcagatcggccatcttgat 1228
|| || || || ||||| || || || || || |||||||| |||||||||||
Sbjct: 260 tctgctggagtacagatcgcagctagatttatcgtcagatctgccatcttgat 208
>gb|BP561046.1|BP561046 BP561046 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-21-H15 5', mRNA
sequence
Length = 660
Score = 192 bits (97), Expect = 1e-046
Identities = 379/473 (80%)
Strand = Plus / Minus
Query: 756 agattgttactgaagcaagccaaaacccgaggcacaccctcgctaggaccatcgacacca 815
||||||||||| ||||| || | |||||| || |||||||||||||||||||| | |||
Sbjct: 622 agattgttactaaagcacgctagaacccgtgggacaccctcgctaggaccatcaatgcca 563
Query: 816 ggaatgaaatccatccttggcccaatccaattaaaaggtctcacgattgtgaattcaagg 875
|| |||||||||||||| || |||||||| || || ||||| || || ||||| || ||
Sbjct: 562 gggatgaaatccatcctaggtccaatccagttgaatggtcttacaatggtgaactcgagt 503
Query: 876 ccattttctgcaccttcagcaaatacaagcctctcaataagttgcttcgcgcaagcatag 935
||||| || ||||| ||||| | ||||| ||||||||||||||||| || ||||||||
Sbjct: 502 ccattctcagcaccctcagcgtaaacaagtctctcaataagttgctttgcacaagcatat 443
Query: 936 gaccatctttgtttcacgattggaccaaaaatacagggcgactcatcttctttaagaaca 995
||||| || || ||| | |||| |||||| || || || || ||||||||| || |||
Sbjct: 442 gaccacctctgcttctcaattgaaccaaagatgcaaggggatatatcttctttgagtaca 383
Query: 996 taaaattcaggttccttgcggagcgggtggtctttggggaggaagctgccgatggtcttg 1055
||||||||||| |||| || || || || || || || || ||||| || || || ||
Sbjct: 382 taaaattcaggatcctgacgcagaggatgatcctttggaagaaagcttcctatagttttt 323
Query: 1056 ccatagacctcgcacgtggagaagtggatgagacgcttgctgttctcggagcagtacttg 1115
||||| | || || ||||| ||||| || ||||||||| ||||||| |||||||| ||
Sbjct: 322 ccatactcttcacaagtggaaaagtgaatcagacgcttgttgttctctgagcagtattta 263
Query: 1116 accactgggagtgcatcgatgaagttgctgtagatggtgtcaagggggcgagtgttgtag 1175
||||||||||| ||||| ||||| ||||||||||| |||||||| || || || |||||
Sbjct: 262 accactgggagagcatcaatgaaattgctgtagatagtgtcaagaggacgcgtattgtaa 203
Query: 1176 tccgccggcgtgcagatagccgccaggttgatggtcagatcggccatcttgat 1228
|| || || || ||||| || || || || || |||||||| |||||||||||
Sbjct: 202 tctgctggagtacagatcgcagctagatttatcgtcagatctgccatcttgat 150
>gb|BU635357.1|BU635357 021A04 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 792
Score = 186 bits (94), Expect = 8e-045
Identities = 380/474 (80%), Gaps = 1/474 (0%)
Strand = Plus / Minus
Query: 756 agattgttactgaagcaagccaaaacccgaggcacaccctcgctaggaccatcgacacca 815
||||||||||| ||||| || | |||||| || |||||||||||||||||||| | |||
Sbjct: 788 agattgttactaaagcacgctagaacccgtgggacaccctcgctaggaccatcaatgcca 729
Query: 816 ggaatgaaat-ccatccttggcccaatccaattaaaaggtctcacgattgtgaattcaag 874
|| ||||||| ||||||| || |||||||| || || ||||| || || ||||| || ||
Sbjct: 728 gggatgaaatcccatcctaggtccaatccagttgaatggtcttacaatggtgaactcgag 669
Query: 875 gccattttctgcaccttcagcaaatacaagcctctcaataagttgcttcgcgcaagcata 934
||||| || ||||| ||||| | ||||| ||||||||||||||||| || ||||||||
Sbjct: 668 tccattctcagcaccctcagcgtaaacaagtctctcaataagttgctttgcacaagcata 609
Query: 935 ggaccatctttgtttcacgattggaccaaaaatacagggcgactcatcttctttaagaac 994
||||| || || ||| | |||| |||||| || || || || ||||||||| || ||
Sbjct: 608 tgaccacctctgcttctcaattgaaccaaagatgcaaggggatatatcttctttgagtac 549
Query: 995 ataaaattcaggttccttgcggagcgggtggtctttggggaggaagctgccgatggtctt 1054
|||||||||||| |||| || || || || || || || || ||||| || || || ||
Sbjct: 548 ataaaattcaggatcctgacgcagaggatgatcctttggaagaaagcttcctatagtttt 489
Query: 1055 gccatagacctcgcacgtggagaagtggatgagacgcttgctgttctcggagcagtactt 1114
||||| || || || ||||| ||||| || ||||||||| ||||||| |||||||| ||
Sbjct: 488 tccatacacttcacaagtggaaaagtgaatcagacgcttgttgttctctgagcagtattt 429
Query: 1115 gaccactgggagtgcatcgatgaagttgctgtagatggtgtcaagggggcgagtgttgta 1174
||||||||||| ||||| ||||| ||||||||||| |||||||| || || || |||||
Sbjct: 428 aaccactgggagagcatcaatgaaattgctgtagatagtgtcaagaggacgcgtattgta 369
Query: 1175 gtccgccggcgtgcagatagccgccaggttgatggtcagatcggccatcttgat 1228
|| || || || ||||| || || || || || |||||||| |||||||||||
Sbjct: 368 atctgctggagtacagatcgcagctagatttatcgtcagatctgccatcttgat 315
>gb|AY735589.1| Arabidopsis thaliana hypothetical protein AT2G27860 mRNA, complete
cds
Length = 1514
Score = 172 bits (87), Expect = 1e-040
Identities = 475/605 (78%)
Strand = Plus / Minus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||| ||||| |||||||||| || | || || || |||||||| ||||||||
Sbjct: 996 tttgcgtaaacctcggtcatcatttcagcgagctgtcttactgtaacttcgttgttcggg 937
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| || || ||||||||||| ||||| || | | || ||||||||||||| | |||
Sbjct: 936 ttgcctacgttgaagatgtgcccatttgccctctctgggttttcaatcatcaaaaggaca 877
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
||||| |||||||| ||||||||||| || |||||||| || | || ||||| ||||||
Sbjct: 876 gcttcaatagcatcattgatgtagacgaaagttctctgtgattctccaccatctacaagc 817
Query: 735 ttcaagggctctctccggagcagattgttactgaagcaagccaaaacccgaggcacaccc 794
|| | ||||| | || || ||||||||||| ||||| || | || || || |||||
Sbjct: 816 ttgagrggctcacgacgtagaagattgttactaaagcaggcaaggacacgtgggacacct 757
Query: 795 tcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaattaaaaggt 854
|||||||||||||| | || || |||||||||||||| || |||||||| |||||||||
Sbjct: 756 tcgctaggaccatcaatgccggggatgaaatccatcctaggtccaatccagttaaaaggt 697
Query: 855 ctcacgattgtgaattcaaggccattttctgcaccttcagcaaatacaagcctctcaata 914
| ||||| ||||| ||||| ||||| || ||||| ||||| | ||||| ||||||||
Sbjct: 696 cgtacgatggtgaactcaagcccattctcagcaccctcagcgtaaacaagtctctcaatc 637
Query: 915 agttgcttcgcgcaagcataggaccatctttgtttcacgattggaccaaaaatacagggc 974
|||||||| || || ||||| ||||| || || ||| | |||| |||||| || || ||
Sbjct: 636 agttgctttgcacacgcatatgaccacctctgcttctcaattgaaccaaatatgcaaggg 577
Query: 975 gactcatcttctttaagaacataaaattcaggttccttgcggagcgggtggtctttgggg 1034
|| |||||||||||||||||| || |||| || | || || || || || || ||
Sbjct: 576 gaaatatcttctttaagaacatagaaagcaggatcatcacgcagaggatgatccttagga 517
Query: 1035 aggaagctgccgatggtcttgccatagacctcgcacgtggagaagtggatgagacgcttg 1094
|| ||||| || ||||| || ||||| || || || || || ||||| ||||||||||||
Sbjct: 516 agaaagcttccaatggtttttccataaacttcacaggtagaaaagtgaatgagacgcttg 457
Query: 1095 ctgttctcggagcagtacttgaccactgggagtgcatcgatgaagttgctgtagatggtg 1154
||||||| || ||||| || || ||||| || ||||| ||||| ||||||||||| ||
Sbjct: 456 ttgttctcagaacagtatttcacaactggaagcgcatcaatgaaattgctgtagatagta 397
Query: 1155 tcaag 1159
|||||
Sbjct: 396 tcaag 392
>gb|CF652774.1|CF652774 75-L020580-066-004-F20-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001F204Q 5-PRIME, mRNA sequence
Length = 798
Score = 168 bits (85), Expect = 2e-039
Identities = 277/341 (81%)
Strand = Plus / Minus
Query: 600 acttcattgttcggattcccaacattgaagatgtggccattggctcgagcaggattttca 659
||||||||||| || || || ||||||||||| || |||||||||| | ||||||||
Sbjct: 348 acttcattgtttgggttgcctacattgaagatatgcccattggctctctctggattttcg 289
Query: 660 atcatcagcactacagcttcgatagcatccttgatgtagacaaaggttctctgagactga 719
||||||| | ||||||||||||||||| |||||||||| ||||||||||| || |
Sbjct: 288 atcatcaaaaggacagcttcgatagcatctttgatgtagatgaaggttctctgtgattct 229
Query: 720 cccccatcaacaagcttcaagggctctctccggagcagattgttactgaagcaagccaaa 779
|| ||||| |||||||| | ||||| | || || ||||||||||| ||||| || | |
Sbjct: 228 ccaccatccacaagcttgagaggctcccgtcgcagaagattgttactaaagcacgctaga 169
Query: 780 acccgaggcacaccctcgctaggaccatcgacaccaggaatgaaatccatccttggccca 839
||||| || |||||||||||||||||||| | ||||| |||||||||||||| || |||
Sbjct: 168 acccgtgggacaccctcgctaggaccatcaatgccagggatgaaatccatcctaggtcca 109
Query: 840 atccaattaaaaggtctcacgattgtgaattcaaggccattttctgcaccttcagcaaat 899
||||| || || ||||| || || ||||| | || ||||| || ||||| ||||| |
Sbjct: 108 atccagttgaatggtcttacaatggtgaactggagtccattctcagcaccctcagcgtaa 49
Query: 900 acaagcctctcaataagttgcttcgcgcaagcataggacca 940
||||| ||||||||||||||||| || |||||||| |||||
Sbjct: 48 acaagtctctcaataagttgctttgcacaagcatatgacca 8
Score = 46.1 bits (23), Expect = 0.019
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 440 gttgattatagtcatgtcggggatcctcttgtcgctatcatcgtatccttc 490
|||||| || |||||||| ||||| ||||||||||| ||||| || |||||
Sbjct: 508 gttgatgatggtcatgtctgggattctcttgtcgctgtcatcataaccttc 458
>gb|AV552526.1|AV552526 AV552526 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ32b06R 5', mRNA sequence
Length = 371
Score = 168 bits (85), Expect = 2e-039
Identities = 278/341 (81%), Gaps = 1/341 (0%)
Strand = Plus / Minus
Query: 600 acttcattgttcggattcccaacattgaagatgtggccattggctcgagcaggattttca 659
||||||||||| || || || ||||||||||| || |||||||||| | ||||||||
Sbjct: 359 acttcattgttggg-ttgcctacattgaagatatgcccattggctctctctggattttcg 301
Query: 660 atcatcagcactacagcttcgatagcatccttgatgtagacaaaggttctctgagactga 719
||||||| | ||||||||||||||||| |||||||||| ||||||||||| || |
Sbjct: 300 atcatcaaaaggacagcttcgatagcatctttgatgtagatgaaggttctctgtgattct 241
Query: 720 cccccatcaacaagcttcaagggctctctccggagcagattgttactgaagcaagccaaa 779
|| ||||| |||||||| | ||||| | || || ||||||||||| ||||| || | |
Sbjct: 240 ccaccatccacaagcttgagaggctcccgtcgcagaagattgttactaaagcacgctaga 181
Query: 780 acccgaggcacaccctcgctaggaccatcgacaccaggaatgaaatccatccttggccca 839
||||| || |||||||||||||||||||| | ||||| |||||||||||||| || |||
Sbjct: 180 acccgtgggacaccctcgctaggaccatcaatgccagggatgaaatccatcctaggtcca 121
Query: 840 atccaattaaaaggtctcacgattgtgaattcaaggccattttctgcaccttcagcaaat 899
||||| || || ||||| || || ||||| || || ||||| || ||||| ||||| |
Sbjct: 120 atccagttgaatggtcttacaatggtgaactcgagtccattctcagcaccctcagcgtaa 61
Query: 900 acaagcctctcaataagttgcttcgcgcaagcataggacca 940
||||| ||||||||||||||||| || |||||||| |||||
Sbjct: 60 acaagtctctcaataagttgctttgcacaagcatatgacca 20
>gb|AF361574.1| Arabidopsis thaliana At2g27860/F15K20.4 mRNA, complete cds
Length = 1386
Score = 168 bits (85), Expect = 2e-039
Identities = 475/605 (78%)
Strand = Plus / Minus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||| ||||| |||||||||| || | || || || |||||||| ||||||||
Sbjct: 984 tttgcgtaaacctcggtcatcatttcagcgagctgtcttactgtaacttcgttgttcggg 925
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| || || ||||||||||| ||||| || | | || ||||||||||||| | |||
Sbjct: 924 ttgcctacgttgaagatgtgcccatttgccctctctgggttttcaatcatcaaaaggaca 865
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
||||| |||||||| ||||||||||| || |||||||| || | || ||||| ||||||
Sbjct: 864 gcttcaatagcatcattgatgtagacgaaagttctctgtgattctccaccatctacaagc 805
Query: 735 ttcaagggctctctccggagcagattgttactgaagcaagccaaaacccgaggcacaccc 794
|| | ||||| | || || ||||||||||| ||||| || | || || || |||||
Sbjct: 804 ttgagaggctcacgacgtagaagattgttactaaagcaggcaaggacacgtgggacacct 745
Query: 795 tcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaattaaaaggt 854
|||||||||||||| | || || |||||||||||||| || |||||||| |||||||||
Sbjct: 744 tcgctaggaccatcaatgccggggatgaaatccatcctaggtccaatccagttaaaaggt 685
Query: 855 ctcacgattgtgaattcaaggccattttctgcaccttcagcaaatacaagcctctcaata 914
| ||||| ||||| ||||| ||||| || ||||| ||||| | ||||| ||||||||
Sbjct: 684 cgtacgatggtgaactcaagcccattctcagcaccctcagcgtaaacaagtctctcaatc 625
Query: 915 agttgcttcgcgcaagcataggaccatctttgtttcacgattggaccaaaaatacagggc 974
|||||||| || || ||||| ||||| || || ||| | |||| |||||| || || ||
Sbjct: 624 agttgctttgcacacgcatatgaccacctctgcttctcaattgaaccaaatatgcaaggg 565
Query: 975 gactcatcttctttaagaacataaaattcaggttccttgcggagcgggtggtctttgggg 1034
|| |||||||||||||||||| || |||| || | || || || || || || ||
Sbjct: 564 gaaatatcttctttaagaacatagaaagcaggatcatcacgcagaggatgatccttagga 505
Query: 1035 aggaagctgccgatggtcttgccatagacctcgcacgtggagaagtggatgagacgcttg 1094
|| ||||| || ||||| || ||||| || || || || || ||||| ||||||||||||
Sbjct: 504 agaaagcttccaatggtttttccataaacttcacaggtagaaaagtgaatgagacgcttg 445
Query: 1095 ctgttctcggagcagtacttgaccactgggagtgcatcgatgaagttgctgtagatggtg 1154
||||||| || ||||| || || ||||| || ||||| ||||| ||||||||||| ||
Sbjct: 444 ttgttctcagaacagtatttcacaactggaagcgcatcaatgaaattgctgtagatagta 385
Query: 1155 tcaag 1159
|||||
Sbjct: 384 tcaag 380
>gb|BT001016.1| Arabidopsis thaliana At2g27860/F15K20.4 mRNA, complete cds
Length = 1170
Score = 168 bits (85), Expect = 2e-039
Identities = 475/605 (78%)
Strand = Plus / Minus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||| ||||| |||||||||| || | || || || |||||||| ||||||||
Sbjct: 932 tttgcgtaaacctcggtcatcatttcagcgagctgtcttactgtaacttcgttgttcggg 873
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| || || ||||||||||| ||||| || | | || ||||||||||||| | |||
Sbjct: 872 ttgcctacgttgaagatgtgcccatttgccctctctgggttttcaatcatcaaaaggaca 813
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
||||| |||||||| ||||||||||| || |||||||| || | || ||||| ||||||
Sbjct: 812 gcttcaatagcatcattgatgtagacgaaagttctctgtgattctccaccatctacaagc 753
Query: 735 ttcaagggctctctccggagcagattgttactgaagcaagccaaaacccgaggcacaccc 794
|| | ||||| | || || ||||||||||| ||||| || | || || || |||||
Sbjct: 752 ttgagaggctcacgacgtagaagattgttactaaagcaggcaaggacacgtgggacacct 693
Query: 795 tcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaattaaaaggt 854
|||||||||||||| | || || |||||||||||||| || |||||||| |||||||||
Sbjct: 692 tcgctaggaccatcaatgccggggatgaaatccatcctaggtccaatccagttaaaaggt 633
Query: 855 ctcacgattgtgaattcaaggccattttctgcaccttcagcaaatacaagcctctcaata 914
| ||||| ||||| ||||| ||||| || ||||| ||||| | ||||| ||||||||
Sbjct: 632 cgtacgatggtgaactcaagcccattctcagcaccctcagcgtaaacaagtctctcaatc 573
Query: 915 agttgcttcgcgcaagcataggaccatctttgtttcacgattggaccaaaaatacagggc 974
|||||||| || || ||||| ||||| || || ||| | |||| |||||| || || ||
Sbjct: 572 agttgctttgcacacgcatatgaccacctctgcttctcaattgaaccaaatatgcaaggg 513
Query: 975 gactcatcttctttaagaacataaaattcaggttccttgcggagcgggtggtctttgggg 1034
|| |||||||||||||||||| || |||| || | || || || || || || ||
Sbjct: 512 gaaatatcttctttaagaacatagaaagcaggatcatcacgcagaggatgatccttagga 453
Query: 1035 aggaagctgccgatggtcttgccatagacctcgcacgtggagaagtggatgagacgcttg 1094
|| ||||| || ||||| || ||||| || || || || || ||||| ||||||||||||
Sbjct: 452 agaaagcttccaatggtttttccataaacttcacaggtagaaaagtgaatgagacgcttg 393
Query: 1095 ctgttctcggagcagtacttgaccactgggagtgcatcgatgaagttgctgtagatggtg 1154
||||||| || ||||| || || ||||| || ||||| ||||| ||||||||||| ||
Sbjct: 392 ttgttctcagaacagtatttcacaactggaagcgcatcaatgaaattgctgtagatagta 333
Query: 1155 tcaag 1159
|||||
Sbjct: 332 tcaag 328
>gb|AY086830.1| Arabidopsis thaliana clone 28205 mRNA, complete sequence
Length = 1496
Score = 168 bits (85), Expect = 2e-039
Identities = 475/605 (78%)
Strand = Plus / Minus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||| ||||| |||||||||| || | || || || |||||||| ||||||||
Sbjct: 990 tttgcgtaaacctcggtcatcatttcagcgagctgtcttactgtaacttcgttgttcggg 931
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| || || ||||||||||| ||||| || | | || ||||||||||||| | |||
Sbjct: 930 ttgcctacgttgaagatgtgcccatttgccctctctgggttttcaatcatcaaaaggaca 871
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
||||| |||||||| ||||||||||| || |||||||| || | || ||||| ||||||
Sbjct: 870 gcttcaatagcatcattgatgtagacgaaagttctctgtgattctccaccatctacaagc 811
Query: 735 ttcaagggctctctccggagcagattgttactgaagcaagccaaaacccgaggcacaccc 794
|| | ||||| | || || ||||||||||| ||||| || | || || || |||||
Sbjct: 810 ttgagaggctcacgacgtagaagattgttactaaagcaggcaaggacacgtgggacacct 751
Query: 795 tcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaattaaaaggt 854
|||||||||||||| | || || |||||||||||||| || |||||||| |||||||||
Sbjct: 750 tcgctaggaccatcaatgccggggatgaaatccatcctaggtccaatccagttaaaaggt 691
Query: 855 ctcacgattgtgaattcaaggccattttctgcaccttcagcaaatacaagcctctcaata 914
| ||||| ||||| ||||| ||||| || ||||| ||||| | ||||| ||||||||
Sbjct: 690 cgtacgatggtgaactcaagcccattctcagcaccctcagcgtaaacaagtctctcaatc 631
Query: 915 agttgcttcgcgcaagcataggaccatctttgtttcacgattggaccaaaaatacagggc 974
|||||||| || || ||||| ||||| || || ||| | |||| |||||| || || ||
Sbjct: 630 agttgctttgcacacgcatatgaccacctctgcttctcaattgaaccaaatatgcaaggg 571
Query: 975 gactcatcttctttaagaacataaaattcaggttccttgcggagcgggtggtctttgggg 1034
|| |||||||||||||||||| || |||| || | || || || || || || ||
Sbjct: 570 gaaatatcttctttaagaacatagaaagcaggatcatcacgcagaggatgatccttagga 511
Query: 1035 aggaagctgccgatggtcttgccatagacctcgcacgtggagaagtggatgagacgcttg 1094
|| ||||| || ||||| || ||||| || || || || || ||||| ||||||||||||
Sbjct: 510 agaaagcttccaatggtttttccataaacttcacaggtagaaaagtgaatgagacgcttg 451
Query: 1095 ctgttctcggagcagtacttgaccactgggagtgcatcgatgaagttgctgtagatggtg 1154
||||||| || ||||| || || ||||| || ||||| ||||| ||||||||||| ||
Sbjct: 450 ttgttctcagaacagtatttcacaactggaagcgcatcaatgaaattgctgtagatagta 391
Query: 1155 tcaag 1159
|||||
Sbjct: 390 tcaag 386
>gb|AY442191.1| Arabidopsis thaliana UDP-D-apiose/UDP-D-xylose synthase (AXS1) mRNA,
complete cds
Length = 1170
Score = 168 bits (85), Expect = 2e-039
Identities = 475/605 (78%)
Strand = Plus / Minus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||| ||||| |||||||||| || | || || || |||||||| ||||||||
Sbjct: 932 tttgcgtaaacctcggtcatcatttcagcgagctgtcttactgtaacttcgttgttcggg 873
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| || || ||||||||||| ||||| || | | || ||||||||||||| | |||
Sbjct: 872 ttgcctacgttgaagatgtgcccatttgccctctctgggttttcaatcatcaaaaggaca 813
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
||||| |||||||| ||||||||||| || |||||||| || | || ||||| ||||||
Sbjct: 812 gcttcaatagcatcattgatgtagacgaaagttctctgtgattctccaccatctacaagc 753
Query: 735 ttcaagggctctctccggagcagattgttactgaagcaagccaaaacccgaggcacaccc 794
|| | ||||| | || || ||||||||||| ||||| || | || || || |||||
Sbjct: 752 ttgagaggctcacgacgtagaagattgttactaaagcaggcaaggacacgtgggacacct 693
Query: 795 tcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaattaaaaggt 854
|||||||||||||| | || || |||||||||||||| || |||||||| |||||||||
Sbjct: 692 tcgctaggaccatcaatgccggggatgaaatccatcctaggtccaatccagttaaaaggt 633
Query: 855 ctcacgattgtgaattcaaggccattttctgcaccttcagcaaatacaagcctctcaata 914
| ||||| ||||| ||||| ||||| || ||||| ||||| | ||||| ||||||||
Sbjct: 632 cgtacgatggtgaactcaagcccattctcagcaccctcagcgtaaacaagtctctcaatc 573
Query: 915 agttgcttcgcgcaagcataggaccatctttgtttcacgattggaccaaaaatacagggc 974
|||||||| || || ||||| ||||| || || ||| | |||| |||||| || || ||
Sbjct: 572 agttgctttgcacacgcatatgaccacctctgcttctcaattgaaccaaatatgcaaggg 513
Query: 975 gactcatcttctttaagaacataaaattcaggttccttgcggagcgggtggtctttgggg 1034
|| |||||||||||||||||| || |||| || | || || || || || || ||
Sbjct: 512 gaaatatcttctttaagaacatagaaagcaggatcatcacgcagaggatgatccttagga 453
Query: 1035 aggaagctgccgatggtcttgccatagacctcgcacgtggagaagtggatgagacgcttg 1094
|| ||||| || ||||| || ||||| || || || || || ||||| ||||||||||||
Sbjct: 452 agaaagcttccaatggtttttccataaacttcacaggtagaaaagtgaatgagacgcttg 393
Query: 1095 ctgttctcggagcagtacttgaccactgggagtgcatcgatgaagttgctgtagatggtg 1154
||||||| || ||||| || || ||||| || ||||| ||||| ||||||||||| ||
Sbjct: 392 ttgttctcagaacagtatttcacaactggaagcgcatcaatgaaattgctgtagatagta 333
Query: 1155 tcaag 1159
|||||
Sbjct: 332 tcaag 328
>emb|CQ806258.1| Sequence 2669 from Patent WO2004035798
Length = 1170
Score = 168 bits (85), Expect = 2e-039
Identities = 475/605 (78%)
Strand = Plus / Minus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||| ||||| |||||||||| || | || || || |||||||| ||||||||
Sbjct: 932 tttgcgtaaacctcggtcatcatttcagcgagctgtcttactgtaacttcgttgttcggg 873
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| || || ||||||||||| ||||| || | | || ||||||||||||| | |||
Sbjct: 872 ttgcctacgttgaagatgtgcccatttgccctctctgggttttcaatcatcaaaaggaca 813
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
||||| |||||||| ||||||||||| || |||||||| || | || ||||| ||||||
Sbjct: 812 gcttcaatagcatcattgatgtagacgaaagttctctgtgattctccaccatctacaagc 753
Query: 735 ttcaagggctctctccggagcagattgttactgaagcaagccaaaacccgaggcacaccc 794
|| | ||||| | || || ||||||||||| ||||| || | || || || |||||
Sbjct: 752 ttgagaggctcacgacgtagaagattgttactaaagcaggcaaggacacgtgggacacct 693
Query: 795 tcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaattaaaaggt 854
|||||||||||||| | || || |||||||||||||| || |||||||| |||||||||
Sbjct: 692 tcgctaggaccatcaatgccggggatgaaatccatcctaggtccaatccagttaaaaggt 633
Query: 855 ctcacgattgtgaattcaaggccattttctgcaccttcagcaaatacaagcctctcaata 914
| ||||| ||||| ||||| ||||| || ||||| ||||| | ||||| ||||||||
Sbjct: 632 cgtacgatggtgaactcaagcccattctcagcaccctcagcgtaaacaagtctctcaatc 573
Query: 915 agttgcttcgcgcaagcataggaccatctttgtttcacgattggaccaaaaatacagggc 974
|||||||| || || ||||| ||||| || || ||| | |||| |||||| || || ||
Sbjct: 572 agttgctttgcacacgcatatgaccacctctgcttctcaattgaaccaaatatgcaaggg 513
Query: 975 gactcatcttctttaagaacataaaattcaggttccttgcggagcgggtggtctttgggg 1034
|| |||||||||||||||||| || |||| || | || || || || || || ||
Sbjct: 512 gaaatatcttctttaagaacatagaaagcaggatcatcacgcagaggatgatccttagga 453
Query: 1035 aggaagctgccgatggtcttgccatagacctcgcacgtggagaagtggatgagacgcttg 1094
|| ||||| || ||||| || ||||| || || || || || ||||| ||||||||||||
Sbjct: 452 agaaagcttccaatggtttttccataaacttcacaggtagaaaagtgaatgagacgcttg 393
Query: 1095 ctgttctcggagcagtacttgaccactgggagtgcatcgatgaagttgctgtagatggtg 1154
||||||| || ||||| || || ||||| || ||||| ||||| ||||||||||| ||
Sbjct: 392 ttgttctcagaacagtatttcacaactggaagcgcatcaatgaaattgctgtagatagta 333
Query: 1155 tcaag 1159
|||||
Sbjct: 332 tcaag 328
>gb|AY924751.1| Arabidopsis thaliana hypothetical protein (At2g27860) mRNA, complete
cds
Length = 1170
Score = 168 bits (85), Expect = 2e-039
Identities = 475/605 (78%)
Strand = Plus / Minus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||| ||||| |||||||||| || | || || || |||||||| ||||||||
Sbjct: 932 tttgcgtaaacctcggtcatcatttcagcgagctgtcttactgtaacttcgttgttcggg 873
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| || || ||||||||||| ||||| || | | || ||||||||||||| | |||
Sbjct: 872 ttgcctacgttgaagatgtgcccatttgccctctctgggttttcaatcatcaaaaggaca 813
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
||||| |||||||| ||||||||||| || |||||||| || | || ||||| ||||||
Sbjct: 812 gcttcaatagcatcattgatgtagacgaaagttctctgtgattctccaccatctacaagc 753
Query: 735 ttcaagggctctctccggagcagattgttactgaagcaagccaaaacccgaggcacaccc 794
|| | ||||| | || || ||||||||||| ||||| || | || || || |||||
Sbjct: 752 ttgagaggctcacgacgtagaagattgttactaaagcaggcaaggacacgtgggacacct 693
Query: 795 tcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaattaaaaggt 854
|||||||||||||| | || || |||||||||||||| || |||||||| |||||||||
Sbjct: 692 tcgctaggaccatcaatgccggggatgaaatccatcctaggtccaatccagttaaaaggt 633
Query: 855 ctcacgattgtgaattcaaggccattttctgcaccttcagcaaatacaagcctctcaata 914
| ||||| ||||| ||||| ||||| || ||||| ||||| | ||||| ||||||||
Sbjct: 632 cgtacgatggtgaactcaagcccattctcagcaccctcagcgtaaacaagtctctcaatc 573
Query: 915 agttgcttcgcgcaagcataggaccatctttgtttcacgattggaccaaaaatacagggc 974
|||||||| || || ||||| ||||| || || ||| | |||| |||||| || || ||
Sbjct: 572 agttgctttgcacacgcatatgaccacctctgcttctcaattgaaccaaatatgcaaggg 513
Query: 975 gactcatcttctttaagaacataaaattcaggttccttgcggagcgggtggtctttgggg 1034
|| |||||||||||||||||| || |||| || | || || || || || || ||
Sbjct: 512 gaaatatcttctttaagaacatagaaagcaggatcatcacgcagaggatgatccttagga 453
Query: 1035 aggaagctgccgatggtcttgccatagacctcgcacgtggagaagtggatgagacgcttg 1094
|| ||||| || ||||| || ||||| || || || || || ||||| ||||||||||||
Sbjct: 452 agaaagcttccaatggtttttccataaacttcacaggtagaaaagtgaatgagacgcttg 393
Query: 1095 ctgttctcggagcagtacttgaccactgggagtgcatcgatgaagttgctgtagatggtg 1154
||||||| || ||||| || || ||||| || ||||| ||||| ||||||||||| ||
Sbjct: 392 ttgttctcagaacagtatttcacaactggaagcgcatcaatgaaattgctgtagatagta 333
Query: 1155 tcaag 1159
|||||
Sbjct: 332 tcaag 328
>ref|NM_128345.2| Arabidopsis thaliana AXS1 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 1)
AT2G27860 (AXS1) mRNA, complete cds
Length = 1516
Score = 168 bits (85), Expect = 2e-039
Identities = 475/605 (78%)
Strand = Plus / Minus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||| ||||| |||||||||| || | || || || |||||||| ||||||||
Sbjct: 987 tttgcgtaaacctcggtcatcatttcagcgagctgtcttactgtaacttcgttgttcggg 928
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| || || ||||||||||| ||||| || | | || ||||||||||||| | |||
Sbjct: 927 ttgcctacgttgaagatgtgcccatttgccctctctgggttttcaatcatcaaaaggaca 868
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
||||| |||||||| ||||||||||| || |||||||| || | || ||||| ||||||
Sbjct: 867 gcttcaatagcatcattgatgtagacgaaagttctctgtgattctccaccatctacaagc 808
Query: 735 ttcaagggctctctccggagcagattgttactgaagcaagccaaaacccgaggcacaccc 794
|| | ||||| | || || ||||||||||| ||||| || | || || || |||||
Sbjct: 807 ttgagaggctcacgacgtagaagattgttactaaagcaggcaaggacacgtgggacacct 748
Query: 795 tcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaattaaaaggt 854
|||||||||||||| | || || |||||||||||||| || |||||||| |||||||||
Sbjct: 747 tcgctaggaccatcaatgccggggatgaaatccatcctaggtccaatccagttaaaaggt 688
Query: 855 ctcacgattgtgaattcaaggccattttctgcaccttcagcaaatacaagcctctcaata 914
| ||||| ||||| ||||| ||||| || ||||| ||||| | ||||| ||||||||
Sbjct: 687 cgtacgatggtgaactcaagcccattctcagcaccctcagcgtaaacaagtctctcaatc 628
Query: 915 agttgcttcgcgcaagcataggaccatctttgtttcacgattggaccaaaaatacagggc 974
|||||||| || || ||||| ||||| || || ||| | |||| |||||| || || ||
Sbjct: 627 agttgctttgcacacgcatatgaccacctctgcttctcaattgaaccaaatatgcaaggg 568
Query: 975 gactcatcttctttaagaacataaaattcaggttccttgcggagcgggtggtctttgggg 1034
|| |||||||||||||||||| || |||| || | || || || || || || ||
Sbjct: 567 gaaatatcttctttaagaacatagaaagcaggatcatcacgcagaggatgatccttagga 508
Query: 1035 aggaagctgccgatggtcttgccatagacctcgcacgtggagaagtggatgagacgcttg 1094
|| ||||| || ||||| || ||||| || || || || || ||||| ||||||||||||
Sbjct: 507 agaaagcttccaatggtttttccataaacttcacaggtagaaaagtgaatgagacgcttg 448
Query: 1095 ctgttctcggagcagtacttgaccactgggagtgcatcgatgaagttgctgtagatggtg 1154
||||||| || ||||| || || ||||| || ||||| ||||| ||||||||||| ||
Sbjct: 447 ttgttctcagaacagtatttcacaactggaagcgcatcaatgaaattgctgtagatagta 388
Query: 1155 tcaag 1159
|||||
Sbjct: 387 tcaag 383
>gb|AV519260.1|AV519260 AV519260 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD53c07F 3', mRNA
sequence
Length = 617
Score = 149 bits (75), Expect = 2e-033
Identities = 351/443 (79%)
Strand = Plus / Plus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||| ||||| |||||||||| || | || || || |||||||| ||||||||
Sbjct: 158 tttgcgtaaacctcggtcatcatttcagcgagctgtcttactgtaacttcgttgttcggg 217
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| || || ||||||||||| ||||| || | | || ||||||||||||| | |||
Sbjct: 218 ttgcctacgttgaagatgtgcccatttgccctctctgggttttcaatcatcaaaaggaca 277
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
||||| |||||||| ||||||||||| || |||||||| || | || ||||| ||||||
Sbjct: 278 gcttcaatagcatcattgatgtagacgaaagttctctgtgattctccaccatctacaagc 337
Query: 735 ttcaagggctctctccggagcagattgttactgaagcaagccaaaacccgaggcacaccc 794
|| | ||||| | || || ||||||||||| ||||| || | || || || |||||
Sbjct: 338 ttgagaggctcacgacgtagaagattgttactaaagcaggcaaggacacgtgggacacct 397
Query: 795 tcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaattaaaaggt 854
|||||||||||||| | || || |||||||||||||| || |||||||| |||||||||
Sbjct: 398 tcgctaggaccatcaatgccggggatgaaatccatcctaggtccaatccagttaaaaggt 457
Query: 855 ctcacgattgtgaattcaaggccattttctgcaccttcagcaaatacaagcctctcaata 914
| ||||| ||||| ||||| ||||| || ||||| ||||| | ||||| ||||||||
Sbjct: 458 cgtacgatggtgaactcaagcccattctcagcaccctcagcgtaaacaagtctctcaatc 517
Query: 915 agttgcttcgcgcaagcataggaccatctttgtttcacgattggaccaaaaatacagggc 974
|||||||| || || ||||| ||||| || || ||| | |||| |||||| || || ||
Sbjct: 518 agttgctttgcacacgcatatgaccacctctgcttctcaattgaaccaaatatgcaaggg 577
Query: 975 gactcatcttctttaagaacata 997
|| ||||||||||||||||||
Sbjct: 578 gaaatatcttctttaagaacata 600
>gb|AI992663.1|AI992663 701498317 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701498317, mRNA sequence
Length = 512
Score = 145 bits (73), Expect = 3e-032
Identities = 319/401 (79%)
Strand = Plus / Minus
Query: 597 gtaacttcattgttcggattcccaacattgaagatgtggccattggctcgagcaggattt 656
|||||||| |||||||| || || || ||||||||||| ||||| || | | || |||
Sbjct: 425 gtaacttcgttgttcgggttgcctacgttgaagatgtgcccatttgccctctctgggttt 366
Query: 657 tcaatcatcagcactacagcttcgatagcatccttgatgtagacaaaggttctctgagac 716
|||||||||| | |||||||| |||||||| ||||||||||| || |||||||| ||
Sbjct: 365 tcaatcatcaaaaggacagcttcaatagcatcattgatgtagacgaaagttctctgtgat 306
Query: 717 tgacccccatcaacaagcttcaagggctctctccggagcagattgttactgaagcaagcc 776
| || ||||| |||||||| | ||||| | || || ||||||||||| ||||| ||
Sbjct: 305 tctccaccatctacaagcttgagaggctcacgacgtagaagattgttactaaagcaggca 246
Query: 777 aaaacccgaggcacaccctcgctaggaccatcgacaccaggaatgaaatccatccttggc 836
| || || || ||||| |||||||||||||| | || || |||||||||||||| ||
Sbjct: 245 aggacacgtgggacaccttcgctaggaccatcaatgccggggatgaaatccatcctaggt 186
Query: 837 ccaatccaattaaaaggtctcacgattgtgaattcaaggccattttctgcaccttcagca 896
|||||||| |||||||||| ||||| ||||| ||||| ||||| || ||||| |||||
Sbjct: 185 ccaatccagttaaaaggtcgtacgatggtgaactcaagcccattctcagcaccctcagcg 126
Query: 897 aatacaagcctctcaataagttgcttcgcgcaagcataggaccatctttgtttcacgatt 956
| ||||| |||||||| |||||||| || || ||||| ||||| || || ||| | |||
Sbjct: 125 taaacaagtctctcaatcagttgctttgcacacgcatatgaccacctctgcttctcaatt 66
Query: 957 ggaccaaaaatacagggcgactcatcttctttaagaacata 997
| |||||| || || || || ||||||||||||||||||
Sbjct: 65 gaaccaaatatgcaaggggaaatatcttctttaagaacata 25
>gb|CF651865.1|CF651865 19-L020577-066-004-E05-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001E054Q 5-PRIME, mRNA sequence
Length = 879
Score = 145 bits (73), Expect = 3e-032
Identities = 396/504 (78%)
Strand = Plus / Minus
Query: 656 ttcaatcatcagcactacagcttcgatagcatccttgatgtagacaaaggttctctgaga 715
||||||||||| | |||||||| |||||||| ||||||||||| || |||||||| ||
Sbjct: 879 ttcaatcatcaaaaggacagcttcaatagcatcattgatgtagacgaaagttctctgtga 820
Query: 716 ctgacccccatcaacaagcttcaagggctctctccggagcagattgttactgaagcaagc 775
| || ||||| ||||||| | ||||| | || || ||||||||||| ||||| ||
Sbjct: 819 ttctccaccatctacaagctgnagaggctcacgacgtagaagattgttactaaagcaggc 760
Query: 776 caaaacccgaggcacaccctcgctaggaccatcgacaccaggaatgaaatccatccttgg 835
| || || || ||||| |||||||||||||| | || || |||||||||||||| ||
Sbjct: 759 aaggacacgtgggacaccttcgctaggaccatcaatgccggggatgaaatccatcctagg 700
Query: 836 cccaatccaattaaaaggtctcacgattgtgaattcaaggccattttctgcaccttcagc 895
|||||||| |||||||||| ||||| ||||| ||||| ||||| || ||||| |||||
Sbjct: 699 tccaatccagttaaaaggtcgtacgatggtgaactcaagcccattctcagcaccctcagc 640
Query: 896 aaatacaagcctctcaataagttgcttcgcgcaagcataggaccatctttgtttcacgat 955
| ||||| |||||||| |||||||| || || ||||| ||||| || || ||| | ||
Sbjct: 639 gtaaacaagtctctcaatcagttgctttgcacacgcatatgaccacctctgcttctcaat 580
Query: 956 tggaccaaaaatacagggcgactcatcttctttaagaacataaaattcaggttccttgcg 1015
|| |||||| || || || || |||||||||||||||||| || |||| || | ||
Sbjct: 579 tgaaccaaatatgcaaggggaaatatcttctttaagaacatagaaagcaggatcatcacg 520
Query: 1016 gagcgggtggtctttggggaggaagctgccgatggtcttgccatagacctcgcacgtgga 1075
|| || || || || || || ||||| || ||||| || ||||| || || || || ||
Sbjct: 519 cagaggatgatccttaggaagaaagcttccaatggtttttccataaacttcacaggtaga 460
Query: 1076 gaagtggatgagacgcttgctgttctcggagcagtacttgaccactgggagtgcatcgat 1135
||||| |||||||||||| ||||||| || ||||| || || ||||| || ||||| ||
Sbjct: 459 aaagtgaatgagacgcttgttgttctcagaacagtatttcacaactggaagcgcatcaat 400
Query: 1136 gaagttgctgtagatggtgtcaag 1159
||| ||||||||||| || |||||
Sbjct: 399 gaaattgctgtagatagtatcaag 376
>gb|CA781608.1|CA781608 028F05AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 660
Score = 141 bits (71), Expect = 4e-031
Identities = 262/323 (81%), Gaps = 2/323 (0%)
Strand = Plus / Minus
Query: 600 acttcattgttcggattcccaacattgaagatgtggccattggctcgagcaggattttca 659
||||||||||| || || || ||||||||||| || |||||||||| | ||||||||
Sbjct: 336 acttcattgtttgggttgcctacattgaagatatgcccattggctctctctggattttcg 277
Query: 660 atcatcagcactacagcttcgatagcatccttgatgtagacaaaggttctctgagactga 719
||||||| | ||||||||||||||||| |||||||||| ||||||||||| || |
Sbjct: 276 atcatcaaaaggacagcttcgatagcatctttgatgtagatgaaggttctctgtgattct 217
Query: 720 cccccatcaacaagcttcaagggctctctccggagcagattgttactgaagcaagccaaa 779
|| ||||| |||||||| | ||||| | || || ||||||||||| ||||| || | |
Sbjct: 216 ccaccatccacaagcttgagaggctcccgtcgcagaagattgttactaaagcacgctaga 157
Query: 780 acccgaggcacaccctcgctaggaccatcgacaccaggaatgaaatccatccttggccca 839
||||| || |||||||||||||||||||| | ||||| |||||||||||||| || |||
Sbjct: 156 acccgtgggacaccctcgctaggaccatcaatgccagggatgaaatccatcctaggtcca 97
Query: 840 atccaattaaaaggtctcacgattgtgaattcaaggccattttctgcaccttcagcaaat 899
||||| || ||||||| || || ||||| || || ||||| || ||||| || | |||
Sbjct: 96 atccagtt-gaaggtcttacaatggtgaactcgagtccattctcagcaccctcggtaaa- 39
Query: 900 acaagcctctcaataagttgctt 922
|||| |||||||||||||||||
Sbjct: 38 ccaagtctctcaataagttgctt 16
Score = 46.1 bits (23), Expect = 0.019
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 440 gttgattatagtcatgtcggggatcctcttgtcgctatcatcgtatccttc 490
|||||| || |||||||| ||||| ||||||||||| ||||| || |||||
Sbjct: 496 gttgatgatggtcatgtctgggattctcttgtcgctgtcatcataaccttc 446
>gb|AV536830.1|AV536830 AV536830 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII0593R 5', mRNA
sequence
Length = 424
Score = 129 bits (65), Expect = 2e-027
Identities = 263/329 (79%)
Strand = Plus / Minus
Query: 900 acaagcctctcaataagttgcttcgcgcaagcataggaccatctttgtttcacgattgga 959
||||| ||||||||||||||||| || |||||||| ||||| || || ||| | |||| |
Sbjct: 389 acaagtctctcaataagttgctttgcacaagcatatgaccacctctgcttctcaattgaa 330
Query: 960 ccaaaaatacagggcgactcatcttctttaagaacataaaattcaggttccttgcggagc 1019
||||| || || || || ||||||||| || |||||||||||||| |||| || ||
Sbjct: 329 ccaaagatgcaaggggatatatcttctttgagtacataaaattcaggatcctgacgcaga 270
Query: 1020 gggtggtctttggggaggaagctgccgatggtcttgccatagacctcgcacgtggagaag 1079
|| || || || || || ||||| || || || || ||||| || || || ||||| |||
Sbjct: 269 ggatgatcctttggaagaaagcttcctatagtttttccatacacttcacaagtggaaaag 210
Query: 1080 tggatgagacgcttgctgttctcggagcagtacttgaccactgggagtgcatcgatgaag 1139
|| || ||||||||| ||||||| |||||||| || ||||||||||| ||||| |||||
Sbjct: 209 tgaatcagacgcttgttgttctctgagcagtatttaaccactgggagagcatcaatgaaa 150
Query: 1140 ttgctgtagatggtgtcaagggggcgagtgttgtagtccgccggcgtgcagatagccgcc 1199
||||||||||| |||||||| || || || ||||| || || || || ||||| || ||
Sbjct: 149 ttgctgtagatagtgtcaagaggacgcgtattgtaatctgctggagtacagatcgcagct 90
Query: 1200 aggttgatggtcagatcggccatcttgat 1228
|| || || |||||||| |||||||||||
Sbjct: 89 agatttatcgtcagatctgccatcttgat 61
>gb|BP560667.1|BP560667 BP560667 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-17-M23 5', mRNA
sequence
Length = 674
Score = 129 bits (65), Expect = 2e-027
Identities = 262/328 (79%)
Strand = Plus / Minus
Query: 901 caagcctctcaataagttgcttcgcgcaagcataggaccatctttgtttcacgattggac 960
|||| ||||||||||||||||| || |||||||| ||||| || || ||| | |||| ||
Sbjct: 672 caagtctctcaataagttgcttngcacaagcatatgaccacctctgcttctcaattgaac 613
Query: 961 caaaaatacagggcgactcatcttctttaagaacataaaattcaggttccttgcggagcg 1020
|||| || || || || ||||||||| || |||||||||||||| |||| || || |
Sbjct: 612 caaagatgcaaggggatatatcttctttgagtacataaaattcaggatcctgacgcagag 553
Query: 1021 ggtggtctttggggaggaagctgccgatggtcttgccatagacctcgcacgtggagaagt 1080
| || || || || || ||||| || || || || ||||| || || || ||||| ||||
Sbjct: 552 gatgatcctttggaagaaagcttcctatagtttttccatacacttcacaagtggaaaagt 493
Query: 1081 ggatgagacgcttgctgttctcggagcagtacttgaccactgggagtgcatcgatgaagt 1140
| || ||||||||| ||||||| |||||||| || ||||||||||| ||||| ||||| |
Sbjct: 492 gaatcagacgcttgttgttctctgagcagtatttaaccactgggagagcatcaatgaaat 433
Query: 1141 tgctgtagatggtgtcaagggggcgagtgttgtagtccgccggcgtgcagatagccgcca 1200
|||||||||| |||||||| || || || ||||| || || || || ||||| || || |
Sbjct: 432 tgctgtagatagtgtcaagaggacgcgtattgtaatctgctggagtacagatcgcagcta 373
Query: 1201 ggttgatggtcagatcggccatcttgat 1228
| || || |||||||| |||||||||||
Sbjct: 372 gatttatcgtcagatctgccatcttgat 345
>gb|Z38091.1|Z38091 ATTS4231 Versailles-VB Arabidopsis thaliana cDNA clone VBVMF07,
mRNA sequence
Length = 423
Score = 125 bits (63), Expect = 3e-026
Identities = 231/287 (80%)
Strand = Plus / Minus
Query: 654 ttttcaatcatcagcactacagcttcgatagcatccttgatgtagacaaaggttctctga 713
||||||||||||| | |||||||| |||||||| ||||||||||| || ||||||||
Sbjct: 400 ttttcaatcatcaaaaggacagcttcaatagcatcattgatgtagacgaaagttctctgt 341
Query: 714 gactgacccccatcaacaagcttcaagggctctctccggagcagattgttactgaagcaa 773
|| | || ||||| |||||||| | ||||| | || || ||||||||||| |||||
Sbjct: 340 gattctccaccatctacaagcttgagaggctcacgacgtagaagattgttactaaagcag 281
Query: 774 gccaaaacccgaggcacaccctcgctaggaccatcgacaccaggaatgaaatccatcctt 833
|| | || || || ||||| |||||||||||||| | || || ||||||||||||||
Sbjct: 280 gcaaggacacgtgggacaccttcgctaggaccatcaatgccggggatgaaatccatccta 221
Query: 834 ggcccaatccaattaaaaggtctcacgattgtgaattcaaggccattttctgcaccttca 893
|| |||||||| |||||||||| ||||| ||||| ||||| ||||| || ||||| |||
Sbjct: 220 ggtccaatccagttaaaaggtcgtacgatggtgaactcaagcccattctcagcaccctca 161
Query: 894 gcaaatacaagcctctcaataagttgcttcgcgcaagcataggacca 940
|| | ||||| |||||||| |||||||| || || ||||| |||||
Sbjct: 160 gcgtaaacaagtctctcaatcagttgctttgcacacgcatatgacca 114
>gb|T22941.1|T22941 4949 Lambda-PRL2 Arabidopsis thaliana cDNA clone 108D23T7, mRNA
sequence
Length = 560
Score = 125 bits (63), Expect = 3e-026
Identities = 231/287 (80%)
Strand = Plus / Minus
Query: 654 ttttcaatcatcagcactacagcttcgatagcatccttgatgtagacaaaggttctctga 713
||||||||||||| | |||||||| |||||||| ||||||||||| || ||||||||
Sbjct: 292 ttttcaatcatcaaaaggacagcttcaatagcatcattgatgtagacgaaagttctctgt 233
Query: 714 gactgacccccatcaacaagcttcaagggctctctccggagcagattgttactgaagcaa 773
|| | || ||||| |||||||| | ||||| | || || ||||||||||| |||||
Sbjct: 232 gattctccaccatctacaagcttgagaggctcacgacgtagaagattgttactaaagcag 173
Query: 774 gccaaaacccgaggcacaccctcgctaggaccatcgacaccaggaatgaaatccatcctt 833
|| | || || || ||||| |||||||||||||| | || || ||||||||||||||
Sbjct: 172 gcaaggacacgtgggacaccttcgctaggaccatcaatgccggggatgaaatccatccta 113
Query: 834 ggcccaatccaattaaaaggtctcacgattgtgaattcaaggccattttctgcaccttca 893
|| |||||||| |||||||||| ||||| ||||| ||||| ||||| || ||||| |||
Sbjct: 112 ggtccaatccagttaaaaggtcgtacgatggtgaactcaagcccattctcagcaccctca 53
Query: 894 gcaaatacaagcctctcaataagttgcttcgcgcaagcataggacca 940
|| | ||||| |||||||| |||||||| || || ||||| |||||
Sbjct: 52 gcgtaaacaagtctctcaatcagttgctttgcacacgcatatgacca 6
>gb|F13818.1|F13818 ATTS4740 Versailles-VB Arabidopsis thaliana cDNA clone VBVPF05, mRNA
sequence
Length = 323
Score = 115 bits (58), Expect = 3e-023
Identities = 209/260 (80%)
Strand = Plus / Minus
Query: 900 acaagcctctcaataagttgcttcgcgcaagcataggaccatctttgtttcacgattgga 959
||||| ||||||||||||||||| || |||||||| ||||| || || ||| | |||| |
Sbjct: 265 acaagtctctcaataagttgctttgcacaagcatatgaccacctctgcttctcaattgaa 206
Query: 960 ccaaaaatacagggcgactcatcttctttaagaacataaaattcaggttccttgcggagc 1019
||||| || || || || ||||||||| || |||||||||||||| |||| || ||
Sbjct: 205 ccaaagatgcaaggggatatatcttctttgagtacataaaattcaggatcctgacgcaga 146
Query: 1020 gggtggtctttggggaggaagctgccgatggtcttgccatagacctcgcacgtggagaag 1079
|| || || || || || ||||| || || || || ||||| || || || ||||| |||
Sbjct: 145 ggatgatcctttggaagaaagcttcctatagtttttccatacacttcacaagtggaaaag 86
Query: 1080 tggatgagacgcttgctgttctcggagcagtacttgaccactgggagtgcatcgatgaag 1139
|| || ||||||||| ||||||| ||||||| || ||||||||||| ||||| |||||
Sbjct: 85 tgaatcagacgcttgttgttctcnnagcagtatttaaccactgggagagcatcaatgaaa 26
Query: 1140 ttgctgtagatggtgtcaag 1159
||||||||||| ||||||||
Sbjct: 25 ttgctgtagatagtgtcaag 6
>gb|AV552647.1|AV552647 AV552647 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ35c03R 5', mRNA sequence
Length = 558
Score = 105 bits (53), Expect = 2e-020
Identities = 200/249 (80%)
Strand = Plus / Minus
Query: 980 atcttctttaagaacataaaattcaggttccttgcggagcgggtggtctttggggaggaa 1039
||||||||| || |||||||||||||| |||| || || || || || || || || ||
Sbjct: 547 atcttctttgagtacataaaattcaggatcctgacgcagaggatgatcctttggaagaaa 488
Query: 1040 gctgccgatggtcttgccatagacctcgcacgtggagaagtggatgagacgcttgctgtt 1099
||| || || || || ||||| || || || ||||| ||||| || ||||||||| ||||
Sbjct: 487 gcttcctatagtttttccatacacttcacaagtggaaaagtgaatcagacgcttgttgtt 428
Query: 1100 ctcggagcagtacttgaccactgggagtgcatcgatgaagttgctgtagatggtgtcaag 1159
||| |||||||| || ||||||||||| ||||| ||||| ||||||||||| ||||||||
Sbjct: 427 ctctgagcagtatttaaccactgggagagcatcaatgaaattgctgtagatagtgtcaag 368
Query: 1160 ggggcgagtgttgtagtccgccggcgtgcagatagccgccaggttgatggtcagatcggc 1219
|| || || ||||| || || || || ||||| || || || || || |||||||| ||
Sbjct: 367 aggacgcgtattgtaatctgctggagtacagatcgcagctagatttatcgtcagatctgc 308
Query: 1220 catcttgat 1228
|||||||||
Sbjct: 307 catcttgat 299
>gb|AV442601.1|AV442601 AV442601 Arabidopsis thaliana above-ground organ two to six-week old
Arabidopsis thaliana cDNA clone APZ31b01_r 5', mRNA
sequence
Length = 533
Score = 99.6 bits (50), Expect = 1e-018
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 1071 gtggagaagtggatgagacgcttgctgttctcggagcagtacttgaccactgggagtgca 1130
||||| ||||| || ||||||||| ||||||| |||||||| || ||||||||||| |||
Sbjct: 451 gtggaaaagtgaatcagacgcttgttgttctctgagcagtatttaaccactgggagagca 392
Query: 1131 tcgatgaagttgctgtagatggtgtcaagggggcgagtgttgtagtccgccggcgtgcag 1190
|| ||||| ||||||||||| |||||||| || || || ||||| || || || || |||
Sbjct: 391 tcaatgaaattgctgtagatagtgtcaagaggacgcgtattgtaatctgctggagtacag 332
Query: 1191 atagccgccaggttgatggtcagatcggccatcttgat 1228
|| || || || || || |||||||| |||||||||||
Sbjct: 331 atcgcagctagatttatcgtcagatctgccatcttgat 294
>gb|B08054.1|B08054 F19A23-Sp6.1 IGF Arabidopsis thaliana genomic clone F19A23, DNA
sequence
Length = 1155
Score = 77.8 bits (39), Expect = 5e-012
Identities = 111/135 (82%)
Strand = Plus / Plus
Query: 761 gttactgaagcaagccaaaacccgaggcacaccctcgctaggaccatcgacaccaggaat 820
|||||| ||||| || | |||||| || |||||||||||||||||||| | ||||| ||
Sbjct: 419 gttactaaagcacgctagaacccgtgggacaccctcgctaggaccatcaatgccagggat 478
Query: 821 gaaatccatccttggcccaatccaattaaaaggtctcacgattgtgaattcaaggccatt 880
|||||||||||| || |||||||| || || ||||| || || ||||| || || |||||
Sbjct: 479 gaaatccatcctaggtccaatccagttgaatggtcttacaatggtgaactcgagtccatt 538
Query: 881 ttctgcaccttcagc 895
|| ||||| |||||
Sbjct: 539 ctcagcaccctcagc 553
Score = 58.0 bits (29), Expect = 5e-006
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 672 acagcttcgatagcatccttgatgtagacaaaggttctctg 712
||||||||||||||||| |||||||||| |||||||||||
Sbjct: 241 acagcttcgatagcatctttgatgtagatgaaggttctctg 281
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 900 acaagcctctcaataagttgcttcgcgcaagcataggacca 940
||||| ||||||||||||||||| || |||||||| |||||
Sbjct: 639 acaagtctctcaataagttgctttgcacaagcatatgacca 679
>gb|B27467.1|B27467 T8P12TF TAMU Arabidopsis thaliana genomic clone T8P12, DNA sequence
Length = 564
Score = 77.8 bits (39), Expect = 5e-012
Identities = 90/107 (84%)
Strand = Plus / Plus
Query: 789 acaccctcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaatta 848
||||| |||||||||||||| | || || |||||||||||||| || |||||||| |||
Sbjct: 80 acaccttcgctaggaccatcaatgccggggatgaaatccatcctaggtccaatccagtta 139
Query: 849 aaaggtctcacgattgtgaattcaaggccattttctgcaccttcagc 895
||||||| ||||| ||||| ||||| ||||| || ||||| |||||
Sbjct: 140 aaaggtcgtacgatggtgaactcaagcccattctcagcaccctcagc 186
Score = 44.1 bits (22), Expect = 0.076
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 900 acaagcctctcaataagttgcttcgcgcaagcataggaccatctttgtttcacgattgga 959
||||| |||||||| |||||||| || || ||||| ||||| || || ||| | |||| |
Sbjct: 266 acaagtctctcaatcagttgctttgcacacgcatatgaccacctctgcttctcaattgaa 325
Query: 960 ccaaaaatacagggcgactcatcttctttaagaacata 997
||||| || || || || ||||||||||||||||||
Sbjct: 326 ccaaatatgcaaggggaaatatcttctttaagaacata 363
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 77.8 bits (39), Expect = 5e-012
Identities = 111/135 (82%)
Strand = Plus / Plus
Query: 761 gttactgaagcaagccaaaacccgaggcacaccctcgctaggaccatcgacaccaggaat 820
|||||| ||||| || | |||||| || |||||||||||||||||||| | ||||| ||
Sbjct: 2574911 gttactaaagcacgctagaacccgtgggacaccctcgctaggaccatcaatgccagggat 2574970
Query: 821 gaaatccatccttggcccaatccaattaaaaggtctcacgattgtgaattcaaggccatt 880
|||||||||||| || |||||||| || || ||||| || || ||||| || || |||||
Sbjct: 2574971 gaaatccatcctaggtccaatccagttgaatggtcttacaatggtgaactcgagtccatt 2575030
Query: 881 ttctgcaccttcagc 895
|| ||||| |||||
Sbjct: 2575031 ctcagcaccctcagc 2575045
Score = 63.9 bits (32), Expect = 8e-008
Identities = 92/112 (82%)
Strand = Plus / Plus
Query: 900 acaagcctctcaataagttgcttcgcgcaagcataggaccatctttgtttcacgattgga 959
||||| ||||||||||||||||| || |||||||| ||||| || || ||| | |||| |
Sbjct: 2575131 acaagtctctcaataagttgctttgcacaagcatatgaccacctctgcttctcaattgaa 2575190
Query: 960 ccaaaaatacagggcgactcatcttctttaagaacataaaattcaggttcct 1011
||||| || || || || ||||||||| || |||||||||||||| ||||
Sbjct: 2575191 ccaaagatgcaaggggatatatcttctttgagtacataaaattcaggatcct 2575242
Score = 58.0 bits (29), Expect = 5e-006
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 672 acagcttcgatagcatccttgatgtagacaaaggttctctg 712
||||||||||||||||| |||||||||| |||||||||||
Sbjct: 2574733 acagcttcgatagcatctttgatgtagatgaaggttctctg 2574773
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1116 accactgggagtgcatcgatgaagttgctgtagatggtgtcaag 1159
||||||||||| ||||| ||||| ||||||||||| ||||||||
Sbjct: 2575936 accactgggagagcatcaatgaaattgctgtagatagtgtcaag 2575979
Score = 46.1 bits (23), Expect = 0.019
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 440 gttgattatagtcatgtcggggatcctcttgtcgctatcatcgtatccttc 490
|||||| || |||||||| ||||| ||||||||||| ||||| || |||||
Sbjct: 2574312 gttgatgatggtcatgtctgggattctcttgtcgctgtcatcataaccttc 2574362
Score = 44.1 bits (22), Expect = 0.076
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 600 acttcattgttcggattcccaacattgaagatgtggccattggctc 645
||||||||||| || || || ||||||||||| || ||||||||||
Sbjct: 2574565 acttcattgtttgggttgcctacattgaagatatgcccattggctc 2574610
>gb|AC011438.3|AC011438 Genomic sequence for Arabidopsis thaliana BAC T23G18 from chromosome I,
complete sequence
Length = 91470
Score = 77.8 bits (39), Expect = 5e-012
Identities = 111/135 (82%)
Strand = Plus / Plus
Query: 761 gttactgaagcaagccaaaacccgaggcacaccctcgctaggaccatcgacaccaggaat 820
|||||| ||||| || | |||||| || |||||||||||||||||||| | ||||| ||
Sbjct: 32985 gttactaaagcacgctagaacccgtgggacaccctcgctaggaccatcaatgccagggat 33044
Query: 821 gaaatccatccttggcccaatccaattaaaaggtctcacgattgtgaattcaaggccatt 880
|||||||||||| || |||||||| || || ||||| || || ||||| || || |||||
Sbjct: 33045 gaaatccatcctaggtccaatccagttgaatggtcttacaatggtgaactcgagtccatt 33104
Query: 881 ttctgcaccttcagc 895
|| ||||| |||||
Sbjct: 33105 ctcagcaccctcagc 33119
Score = 63.9 bits (32), Expect = 8e-008
Identities = 92/112 (82%)
Strand = Plus / Plus
Query: 900 acaagcctctcaataagttgcttcgcgcaagcataggaccatctttgtttcacgattgga 959
||||| ||||||||||||||||| || |||||||| ||||| || || ||| | |||| |
Sbjct: 33205 acaagtctctcaataagttgctttgcacaagcatatgaccacctctgcttctcaattgaa 33264
Query: 960 ccaaaaatacagggcgactcatcttctttaagaacataaaattcaggttcct 1011
||||| || || || || ||||||||| || |||||||||||||| ||||
Sbjct: 33265 ccaaagatgcaaggggatatatcttctttgagtacataaaattcaggatcct 33316
Score = 58.0 bits (29), Expect = 5e-006
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 672 acagcttcgatagcatccttgatgtagacaaaggttctctg 712
||||||||||||||||| |||||||||| |||||||||||
Sbjct: 32807 acagcttcgatagcatctttgatgtagatgaaggttctctg 32847
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1116 accactgggagtgcatcgatgaagttgctgtagatggtgtcaag 1159
||||||||||| ||||| ||||| ||||||||||| ||||||||
Sbjct: 34010 accactgggagagcatcaatgaaattgctgtagatagtgtcaag 34053
Score = 46.1 bits (23), Expect = 0.019
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 440 gttgattatagtcatgtcggggatcctcttgtcgctatcatcgtatccttc 490
|||||| || |||||||| ||||| ||||||||||| ||||| || |||||
Sbjct: 32386 gttgatgatggtcatgtctgggattctcttgtcgctgtcatcataaccttc 32436
Score = 44.1 bits (22), Expect = 0.076
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 600 acttcattgttcggattcccaacattgaagatgtggccattggctc 645
||||||||||| || || || ||||||||||| || ||||||||||
Sbjct: 32639 acttcattgtttgggttgcctacattgaagatatgcccattggctc 32684
>gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K20 map B68, complete
sequence
Length = 118196
Score = 77.8 bits (39), Expect = 5e-012
Identities = 90/107 (84%)
Strand = Plus / Minus
Query: 789 acaccctcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaatta 848
||||| |||||||||||||| | || || |||||||||||||| || |||||||| |||
Sbjct: 14144 acaccttcgctaggaccatcaatgccggggatgaaatccatcctaggtccaatccagtta 14085
Query: 849 aaaggtctcacgattgtgaattcaaggccattttctgcaccttcagc 895
||||||| ||||| ||||| ||||| ||||| || ||||| |||||
Sbjct: 14084 aaaggtcgtacgatggtgaactcaagcccattctcagcaccctcagc 14038
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 672 acagcttcgatagcatccttgatgtagacaaaggttctctg 712
|||||||| |||||||| ||||||||||| || ||||||||
Sbjct: 14349 acagcttcaatagcatcattgatgtagacgaaagttctctg 14309
Score = 44.1 bits (22), Expect = 0.076
Identities = 79/98 (80%)
Strand = Plus / Minus
Query: 900 acaagcctctcaataagttgcttcgcgcaagcataggaccatctttgtttcacgattgga 959
||||| |||||||| |||||||| || || ||||| ||||| || || ||| | |||| |
Sbjct: 13958 acaagtctctcaatcagttgctttgcacacgcatatgaccacctctgcttctcaattgaa 13899
Query: 960 ccaaaaatacagggcgactcatcttctttaagaacata 997
||||| || || || || ||||||||||||||||||
Sbjct: 13898 ccaaatatgcaaggggaaatatcttctttaagaacata 13861
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 77.8 bits (39), Expect = 5e-012
Identities = 90/107 (84%)
Strand = Plus / Plus
Query: 789 acaccctcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaatta 848
||||| |||||||||||||| | || || |||||||||||||| || |||||||| |||
Sbjct: 11872610 acaccttcgctaggaccatcaatgccggggatgaaatccatcctaggtccaatccagtta 11872669
Query: 849 aaaggtctcacgattgtgaattcaaggccattttctgcaccttcagc 895
||||||| ||||| ||||| ||||| ||||| || ||||| |||||
Sbjct: 11872670 aaaggtcgtacgatggtgaactcaagcccattctcagcaccctcagc 11872716
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 672 acagcttcgatagcatccttgatgtagacaaaggttctctg 712
|||||||| |||||||| ||||||||||| || ||||||||
Sbjct: 11872405 acagcttcaatagcatcattgatgtagacgaaagttctctg 11872445
Score = 44.1 bits (22), Expect = 0.076
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 900 acaagcctctcaataagttgcttcgcgcaagcataggaccatctttgtttcacgattgga 959
||||| |||||||| |||||||| || || ||||| ||||| || || ||| | |||| |
Sbjct: 11872796 acaagtctctcaatcagttgctttgcacacgcatatgaccacctctgcttctcaattgaa 11872855
Query: 960 ccaaaaatacagggcgactcatcttctttaagaacata 997
||||| || || || || ||||||||||||||||||
Sbjct: 11872856 ccaaatatgcaaggggaaatatcttctttaagaacata 11872893
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 77.8 bits (39), Expect = 5e-012
Identities = 111/135 (82%)
Strand = Plus / Plus
Query: 761 gttactgaagcaagccaaaacccgaggcacaccctcgctaggaccatcgacaccaggaat 820
|||||| ||||| || | |||||| || |||||||||||||||||||| | ||||| ||
Sbjct: 2575064 gttactaaagcacgctagaacccgtgggacaccctcgctaggaccatcaatgccagggat 2575123
Query: 821 gaaatccatccttggcccaatccaattaaaaggtctcacgattgtgaattcaaggccatt 880
|||||||||||| || |||||||| || || ||||| || || ||||| || || |||||
Sbjct: 2575124 gaaatccatcctaggtccaatccagttgaatggtcttacaatggtgaactcgagtccatt 2575183
Query: 881 ttctgcaccttcagc 895
|| ||||| |||||
Sbjct: 2575184 ctcagcaccctcagc 2575198
Score = 63.9 bits (32), Expect = 8e-008
Identities = 92/112 (82%)
Strand = Plus / Plus
Query: 900 acaagcctctcaataagttgcttcgcgcaagcataggaccatctttgtttcacgattgga 959
||||| ||||||||||||||||| || |||||||| ||||| || || ||| | |||| |
Sbjct: 2575284 acaagtctctcaataagttgctttgcacaagcatatgaccacctctgcttctcaattgaa 2575343
Query: 960 ccaaaaatacagggcgactcatcttctttaagaacataaaattcaggttcct 1011
||||| || || || || ||||||||| || |||||||||||||| ||||
Sbjct: 2575344 ccaaagatgcaaggggatatatcttctttgagtacataaaattcaggatcct 2575395
Score = 58.0 bits (29), Expect = 5e-006
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 672 acagcttcgatagcatccttgatgtagacaaaggttctctg 712
||||||||||||||||| |||||||||| |||||||||||
Sbjct: 2574886 acagcttcgatagcatctttgatgtagatgaaggttctctg 2574926
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1116 accactgggagtgcatcgatgaagttgctgtagatggtgtcaag 1159
||||||||||| ||||| ||||| ||||||||||| ||||||||
Sbjct: 2576089 accactgggagagcatcaatgaaattgctgtagatagtgtcaag 2576132
Score = 46.1 bits (23), Expect = 0.019
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 440 gttgattatagtcatgtcggggatcctcttgtcgctatcatcgtatccttc 490
|||||| || |||||||| ||||| ||||||||||| ||||| || |||||
Sbjct: 2574465 gttgatgatggtcatgtctgggattctcttgtcgctgtcatcataaccttc 2574515
Score = 44.1 bits (22), Expect = 0.076
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 600 acttcattgttcggattcccaacattgaagatgtggccattggctc 645
||||||||||| || || || ||||||||||| || ||||||||||
Sbjct: 2574718 acttcattgtttgggttgcctacattgaagatatgcccattggctc 2574763
>gb|AV521251.1|AV521251 AV521251 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ49a07F 3', mRNA
sequence
Length = 645
Score = 75.8 bits (38), Expect = 2e-011
Identities = 200/254 (78%)
Strand = Plus / Plus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||| ||||| |||||||||| || | || || || |||||||| ||||||||
Sbjct: 374 tttgcgtaaacctcggtcatcatttcagcgagctgtcttactgtaacttcgttgttcggg 433
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| || || ||||||||||| ||||| || | | || ||||||||||||| | |||
Sbjct: 434 ttgcctacgttgaagatgtgcccatttgccctctctgggttttcaatcatcaaaaggaca 493
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
||||| |||||||| ||||||||||| || |||||||| || | || ||||| ||||||
Sbjct: 494 gcttcaatagcatcattgatgtagacgaaagttctctgtgattctccaccatctacaagc 553
Query: 735 ttcaagggctctctccggagcagattgttactgaagcaagccaaaacccgaggcacaccc 794
|| | ||||| | || || ||||||||||| ||||| || | || || || |||||
Sbjct: 554 ttgagaggctcacgacgtagaagattgttactaaagcaggcaaggacacgtgggacacct 613
Query: 795 tcgctaggaccatc 808
||||||||||||||
Sbjct: 614 tcgctaggaccatc 627
>gb|AV551332.1|AV551332 AV551332 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ125c10R 5', mRNA sequence
Length = 551
Score = 75.8 bits (38), Expect = 2e-011
Identities = 236/302 (78%)
Strand = Plus / Minus
Query: 858 acgattgtgaattcaaggccattttctgcaccttcagcaaatacaagcctctcaataagt 917
||||| ||||| ||||| ||||| || ||||| ||||| | ||||| |||||||| |||
Sbjct: 546 acgatggtgaactcaagcccattctcagcaccctcagcgtaaacaagtctctcaatcagt 487
Query: 918 tgcttcgcgcaagcataggaccatctttgtttcacgattggaccaaaaatacagggcgac 977
||||| || || ||||| ||||| || || ||| | |||| |||||| || || || ||
Sbjct: 486 tgctttgcacacgcatatgaccacctctgcttctcaattgaaccaaatatgcaaggggaa 427
Query: 978 tcatcttctttaagaacataaaattcaggttccttgcggagcgggtggtctttggggagg 1037
|||||||||||||||||| || |||| || | || || || || || || || ||
Sbjct: 426 atatcttctttaagaacatagaaagcaggatcatcacgcagaggatgatccttaggaaga 367
Query: 1038 aagctgccgatggtcttgccatagacctcgcacgtggagaagtggatgagacgcttgctg 1097
||||| || ||||| || ||||| || || || || || ||||| |||||||||||| ||
Sbjct: 366 aagcttccaatggtttttccataaacttcacaggtagaaaagtgaatgagacgcttgttg 307
Query: 1098 ttctcggagcagtacttgaccactgggagtgcatcgatgaagttgctgtagatggtgtca 1157
||||| || ||||| || || ||||| || ||||| ||||| ||||||||||| || |||
Sbjct: 306 ttctcagaacagtatttcacaactggaagcgcatcaatgaaattgctgtagatagtatca 247
Query: 1158 ag 1159
||
Sbjct: 246 ag 245
>gb|T43628.1|T43628 6891 Lambda-PRL2 Arabidopsis thaliana cDNA clone 121L17T7, mRNA
sequence
Length = 284
Score = 67.9 bits (34), Expect = 5e-009
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 834 ggcccaatccaattaaaaggtctcacgattgtgaattcaaggccattttctgcaccttca 893
||||||||||| |||||||||| ||||| ||||| | ||| ||||| || ||||| |||
Sbjct: 188 ggcccaatccagttaaaaggtcgtacgatggtgaactnaagcccattctcagcaccctca 129
Query: 894 gcaaatacaagcctctcaataagttgcttcgcgcaagcataggaccatctttgtttcacg 953
|| | ||||| |||||||| |||||||| | || ||||| ||||| || || ||| |
Sbjct: 128 gcgtaaacaagtctctcaatcagttgctttgnacacgcatatgaccacctctgcttctca 69
Query: 954 attggaccaaaaatacagggcgactcatcttctttaagaacata 997
|||| |||||| || || || || ||||||||||||||||||
Sbjct: 68 attgaaccaaatatgcaaggggaaatatcttctttaagaacata 25
>gb|AV782482.1|AV782482 AV782482 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-17-M23 3',
mRNA sequence
Length = 686
Score = 67.9 bits (34), Expect = 5e-009
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 600 acttcattgttcggattcccaacattgaagatgtggccattggctcgagcaggattttca 659
||||||||||| || || || ||||||||||| || |||||||||| | ||||||||
Sbjct: 589 acttcattgtttgggttgcctacattgaagatatgcccattggctctctctggattttcg 648
Query: 660 atcatcagcactacagcttcgatagcatccttgatgta 697
||||||| | ||||||||||||||||| ||||||||
Sbjct: 649 atcatcaaaaggacagcttcgatagcatctttgatgta 686
Score = 46.1 bits (23), Expect = 0.019
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 440 gttgattatagtcatgtcggggatcctcttgtcgctatcatcgtatccttc 490
|||||| || |||||||| ||||| ||||||||||| ||||| || |||||
Sbjct: 429 gttgatgatggtcatgtctgggattctcttgtcgctgtcatcataaccttc 479
>gb|CB261664.1|CB261664 91-E9723-008-016-F23-pBl2 MPIZ-ADIS-008 Arabidopsis thaliana cDNA
clone MPIZp767F2316Q 5-PRIME, mRNA sequence
Length = 592
Score = 67.9 bits (34), Expect = 5e-009
Identities = 127/158 (80%)
Strand = Plus / Plus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||| ||||| |||||||||| || | || || || |||||||| ||||||||
Sbjct: 395 tttgcgtaaacctcggtcatcatttcagcgagctgtcttactgtaacttcgttgttcggg 454
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| || || ||||||||||| ||||| || | | || ||||||||||||| | |||
Sbjct: 455 ttgcctacgttgaagatgtgcccatttgccctctctgggttttcaatcatcaaaaggaca 514
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctg 712
||||| |||||||| ||||||||||| || ||||||||
Sbjct: 515 gcttcaatagcatcattgatgtagacgaaagttctctg 552
>gb|CB256019.1|CB256019 06-E012744-027-007-L02-T7R MPIZ-ADIS-027 Arabidopsis thaliana cDNA
clone MPIZp772L027Q 5-PRIME, mRNA sequence
Length = 614
Score = 65.9 bits (33), Expect = 2e-008
Identities = 120/149 (80%)
Strand = Plus / Minus
Query: 1077 aagtggatgagacgcttgctgttctcggagcagtacttgaccactgggagtgcatcgatg 1136
||||| |||||||||||| ||||||| || ||||| || || ||||| || ||||| |||
Sbjct: 447 aagtgaatgagacgcttgttgttctcagaacagtatttcacaactggaagcgcatcaatg 388
Query: 1137 aagttgctgtagatggtgtcaagggggcgagtgttgtagtccgccggcgtgcagatagcc 1196
|| ||||||||||| || ||||| || || || ||||| || || || || ||||| ||
Sbjct: 387 aaattgctgtagatagtatcaagaggacgtgtattgtaatcagctggagtacagatcgca 328
Query: 1197 gccaggttgatggtcagatcggccatctt 1225
|| ||||| || ||||||| ||||||||
Sbjct: 327 gcaaggtttataatcagatccgccatctt 299
>gb|CB257882.1|CB257882 95-E011797-014-004-M23-T7R MPIZ-ADIS-014 Arabidopsis thaliana cDNA
clone MPIZp771M234Q 5-PRIME, mRNA sequence
Length = 644
Score = 65.9 bits (33), Expect = 2e-008
Identities = 120/149 (80%)
Strand = Plus / Minus
Query: 1077 aagtggatgagacgcttgctgttctcggagcagtacttgaccactgggagtgcatcgatg 1136
||||| |||||||||||| ||||||| || ||||| || || ||||| || ||||| |||
Sbjct: 464 aagtgaatgagacgcttgttgttctcagaacagtatttcacaactggaagcgcatcaatg 405
Query: 1137 aagttgctgtagatggtgtcaagggggcgagtgttgtagtccgccggcgtgcagatagcc 1196
|| ||||||||||| || ||||| || || || ||||| || || || || ||||| ||
Sbjct: 404 aaattgctgtagatagtatcaagaggacgtgtattgtaatcagctggagtacagatcgca 345
Query: 1197 gccaggttgatggtcagatcggccatctt 1225
|| ||||| || ||||||| ||||||||
Sbjct: 344 gcaaggtttataatcagatccgccatctt 316
>gb|CB257884.1|CB257884 95-E011801-014-004-M23-T7R MPIZ-ADIS-014 Arabidopsis thaliana cDNA
clone MPIZp771M234Q 5-PRIME, mRNA sequence
Length = 631
Score = 65.9 bits (33), Expect = 2e-008
Identities = 120/149 (80%)
Strand = Plus / Minus
Query: 1077 aagtggatgagacgcttgctgttctcggagcagtacttgaccactgggagtgcatcgatg 1136
||||| |||||||||||| ||||||| || ||||| || || ||||| || ||||| |||
Sbjct: 464 aagtgaatgagacgcttgttgttctcagaacagtatttcacaactggaagcgcatcaatg 405
Query: 1137 aagttgctgtagatggtgtcaagggggcgagtgttgtagtccgccggcgtgcagatagcc 1196
|| ||||||||||| || ||||| || || || ||||| || || || || ||||| ||
Sbjct: 404 aaattgctgtagatagtatcaagaggacgtgtattgtaatcagctggagtacagatcgca 345
Query: 1197 gccaggttgatggtcagatcggccatctt 1225
|| ||||| || ||||||| ||||||||
Sbjct: 344 gcaaggtttataatcagatccgccatctt 316
>gb|CB258370.1|CB258370 32-E011082-014-003-P07-T7R MPIZ-ADIS-014 Arabidopsis thaliana cDNA
clone MPIZp771P073Q 5-PRIME, mRNA sequence
Length = 583
Score = 61.9 bits (31), Expect = 3e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 1077 aagtggatgagacgcttgctgttctcggagcagtacttgaccactgggagtgcatcgatg 1136
||||| |||||||||||| ||||||| || ||||| || || ||||| || ||||| |||
Sbjct: 448 aagtgaatgagacgcttgttgttctcagaacagtatttcacaactggaagcgcatcaatg 389
Query: 1137 aagttgctgtagatggtgtcaag 1159
|| ||||||||||| || |||||
Sbjct: 388 aaattgctgtagatagtatcaag 366
>gb|CB262501.1|CB262501 58-E8975-008-017-C16-pBl2 MPIZ-ADIS-008 Arabidopsis thaliana cDNA
clone MPIZp767C1617Q 5-PRIME, mRNA sequence
Length = 438
Score = 61.9 bits (31), Expect = 3e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 1077 aagtggatgagacgcttgctgttctcggagcagtacttgaccactgggagtgcatcgatg 1136
||||| |||||||||||| ||||||| || ||||| || || ||||| || ||||| |||
Sbjct: 304 aagtgaatgagacgcttgttgttctcagaacagtatttcacaactggaagcgcatcaatg 245
Query: 1137 aagttgctgtagatggtgtcaag 1159
|| ||||||||||| || |||||
Sbjct: 244 aaattgctgtagatagtatcaag 222
>gb|AV563008.1|AV563008 AV563008 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ179h08F 3', mRNA sequence
Length = 459
Score = 61.9 bits (31), Expect = 3e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 1077 aagtggatgagacgcttgctgttctcggagcagtacttgaccactgggagtgcatcgatg 1136
||||| |||||||||||| ||||||| || ||||| || || ||||| || ||||| |||
Sbjct: 429 aagtgaatgagacgcttgttgttctcagaacagtatttcacaactggaagcgcatcaatg 370
Query: 1137 aagttgctgtagatggtgtcaag 1159
|| ||||||||||| || |||||
Sbjct: 369 aaattgctgtagatagtatcaag 347
>gb|BP796435.1|BP796435 BP796435 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-05-L21 5', mRNA
sequence
Length = 670
Score = 61.9 bits (31), Expect = 3e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 1077 aagtggatgagacgcttgctgttctcggagcagtacttgaccactgggagtgcatcgatg 1136
||||| |||||||||||| ||||||| || ||||| || || ||||| || ||||| |||
Sbjct: 465 aagtgaatgagacgcttgttgttctcagaacagtatttcacaactggaagcgcatcaatg 406
Query: 1137 aagttgctgtagatggtgtcaag 1159
|| ||||||||||| || |||||
Sbjct: 405 aaattgctgtagatagtatcaag 383
>gb|R84049.1|R84049 16008 Lambda-PRL2 Arabidopsis thaliana cDNA clone 130N17T7, mRNA
sequence
Length = 269
Score = 52.0 bits (26), Expect = 3e-004
Identities = 109/137 (79%)
Strand = Plus / Minus
Query: 672 acagcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaaca 731
|||||||| |||||||| ||||||||||| || |||||||| || | || ||||| |||
Sbjct: 157 acagcttcaatagcatcattgatgtagacgaaagttctctgtgattctccaccatctaca 98
Query: 732 agcttcaagggctctctccggagcagattgttactgaagcaagccaaaacccgaggcaca 791
||||| | ||||| | || || ||||||||||| ||||| || | | || || |||
Sbjct: 97 agcttgagaggctcacgacgtagaagattgttactaaagcaggcaagganacgtgggaca 38
Query: 792 ccctcgctaggaccatc 808
|| ||||||||||||||
Sbjct: 37 ccttcgctaggaccatc 21
>gb|AQ249659.1|AQ249659 F19A23-Sp6.2 IGF Arabidopsis thaliana genomic clone F19A23, DNA
sequence
Length = 658
Score = 50.1 bits (25), Expect = 0.001
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 761 gttactgaagcaagccaaaacccgaggcacaccctcgctaggaccatcgacaccaggaat 820
|||||| |||| || |||| ||| || |||||||||||||||||||| | |||| ||
Sbjct: 274 gttactanagcacgctaaaaaccgtgggacaccctcgctaggaccatcaatgccagagat 333
Query: 821 gaaatccatcct 832
||||||||||||
Sbjct: 334 gaaatccatcct 345
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 672 acagcttcgatagcatccttgatgtagacaaaggttctctg 712
||||||||||||||||| |||||||| | |||||||||||
Sbjct: 96 acagcttcgatagcatctttgatgtaaatgaaggttctctg 136
>emb|AL095446.1|CNS00XX4 Arabidopsis thaliana genome survey sequence T7 end of BAC T15B8 of
TAMU library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 128
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 672 acagcttcgatagcatccttgatgtagacaaaggttctctg 712
|||||||| |||||||| ||||||||||| || ||||||||
Sbjct: 119 acagcttcaatagcatcattgatgtagacgaaagttctctg 79
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 636,022
Number of Sequences: 1013581
Number of extensions: 636022
Number of successful extensions: 45632
Number of sequences better than 0.5: 64
Number of HSP's better than 0.5 without gapping: 62
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 44669
Number of HSP's gapped (non-prelim): 892
length of query: 1644
length of database: 908,940,872
effective HSP length: 21
effective length of query: 1623
effective length of database: 887,655,671
effective search space: 1440665154033
effective search space used: 1440665154033
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)