BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2306429.2.1
(1175 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF080118.1|F8M12 Arabidopsis thaliana BAC F8M12 86 2e-014
gb|AY140073.1| Arabidopsis thaliana UDP-galactose 4-epimera... 86 2e-014
gb|AY065354.1| Arabidopsis thaliana putative UDP-galactose ... 86 2e-014
gb|AY117180.1| Arabidopsis thaliana putative UDP-galactose ... 86 2e-014
emb|BX827643.1|CNS0A2DZ Arabidopsis thaliana Full-length cD... 86 2e-014
emb|BX827147.1|CNS0A3P3 Arabidopsis thaliana Full-length cD... 86 2e-014
emb|BX827895.1|CNS0A3UR Arabidopsis thaliana Full-length cD... 86 2e-014
emb|BX826665.1|CNS0A44W Arabidopsis thaliana Full-length cD... 86 2e-014
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 86 2e-014
emb|AL049525.1|ATF25I24 Arabidopsis thaliana DNA chromosome... 86 2e-014
emb|AL161518.2|ATCHRIV30 Arabidopsis thaliana DNA chromosom... 86 2e-014
ref|NM_117165.2| Arabidopsis thaliana triacylglycerol lipas... 86 2e-014
ref|NM_117166.2| Arabidopsis thaliana NAD binding / UDP-glu... 86 2e-014
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 86 2e-014
gb|AY084615.1| Arabidopsis thaliana clone 11330 mRNA, compl... 82 2e-013
gb|BT008539.1| Arabidopsis thaliana clone U51171 putative U... 82 2e-013
dbj|AK118722.1| Arabidopsis thaliana At4g23920 mRNA for put... 82 2e-013
emb|AL078468.1|ATT32A16 Arabidopsis thaliana DNA chromosome... 82 2e-013
emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosom... 82 2e-013
ref|NM_118524.2| Arabidopsis thaliana NAD binding / UDP-glu... 82 2e-013
gb|AY085528.1| Arabidopsis thaliana clone 15608 mRNA, compl... 78 4e-012
gb|BZ660593.1|BZ660593 SALK_024044.33.30.x Arabidopsis thal... 74 6e-011
gb|BT011226.1| Arabidopsis thaliana 58 4e-006
emb|BX818643.1|CNS0AAWT Arabidopsis thaliana Full-length cD... 58 4e-006
emb|BX817161.1|CNS0ABLN Arabidopsis thaliana Full-length cD... 58 4e-006
emb|BX813435.1|CNS0AC0X Arabidopsis thaliana Full-length cD... 58 4e-006
emb|BX815944.1|CNS0ABVK Arabidopsis thaliana Full-length cD... 58 4e-006
emb|BX816595.1|CNS0ABW1 Arabidopsis thaliana Full-length cD... 58 4e-006
gb|BT012154.1| Arabidopsis thaliana At1g64440 mRNA, complet... 58 4e-006
ref|NM_105119.3| Arabidopsis thaliana RHD1 (ROOT HAIR DEFEC... 58 4e-006
gb|AC009519.4|AC009519 Genomic sequence for Arabidopsis tha... 56 1e-005
gb|AC066689.5|AC066689 Arabidopsis thaliana chromosome 1 BA... 56 1e-005
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 56 1e-005
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 56 1e-005
emb|BX841511.1|CNS09YH0 Arabidopsis thaliana Full-length cD... 52 2e-004
gb|AY094481.1| Arabidopsis thaliana At1g63180/F16M19_8 mRNA... 46 0.014
gb|AY085887.1| Arabidopsis thaliana clone 1932 mRNA, comple... 46 0.014
gb|AC010795.5|AC010795 Arabidopsis thaliana chromosome 1 BA... 46 0.014
dbj|AK117913.1| Arabidopsis thaliana At1g63180 mRNA for put... 46 0.014
ref|NM_104996.3| Arabidopsis thaliana NAD binding / UDP-glu... 46 0.014
gb|F13966.1|F13966 ATTS4888 Versailles-VB Arabidopsis thali... 44 0.054
gb|AU229988.1|AU229988 AU229988 RAFL19 Arabidopsis thaliana... 44 0.054
gb|BP622585.1|BP622585 BP622585 RAFL17 Arabidopsis thaliana... 44 0.054
gb|BP639411.1|BP639411 BP639411 RAFL19 Arabidopsis thaliana... 44 0.054
emb|BX663925.1| Arabidopsis thaliana transposon insertion S... 42 0.21
>gb|AF080118.1|F8M12 Arabidopsis thaliana BAC F8M12
Length = 103673
Score = 85.7 bits (43), Expect = 2e-014
Identities = 109/131 (83%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
||||||||||| || || |||||||| |||||||| |||||||| ||||||||||| |
Sbjct: 30385 gaatggaagattatattgcttaggtatttcaatcctgttggtgcacatcctagtggtgac 30444
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || ||||| || || ||||| |||||||| ||||||| ||| || ||||| ||
Sbjct: 30445 attggtgaagaccctcgtggtattccaaacaatctcatgccctttgtacaacaagtggct 30504
Query: 153 gttggtaggag 163
|||||||||||
Sbjct: 30505 gttggtaggag 30515
>gb|AY140073.1| Arabidopsis thaliana UDP-galactose 4-epimerase-like protein
(At4g10960) mRNA, complete cds
Length = 2800
Score = 85.7 bits (43), Expect = 2e-014
Identities = 109/131 (83%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
||||||||||| || || |||||||| |||||||| |||||||| ||||||||||| |
Sbjct: 602 gaatggaagattatattgcttaggtatttcaatcctgttggtgcacatcctagtggtgac 661
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || ||||| || || ||||| |||||||| ||||||| ||| || ||||| ||
Sbjct: 662 attggtgaagaccctcgtggtattccaaacaatctcatgccctttgtacaacaagtggct 721
Query: 153 gttggtaggag 163
|||||||||||
Sbjct: 722 gttggtaggag 732
>gb|AY065354.1| Arabidopsis thaliana putative UDP-galactose 4-epimerase (At4g10960)
mRNA, complete cds
Length = 1356
Score = 85.7 bits (43), Expect = 2e-014
Identities = 109/131 (83%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
||||||||||| || || |||||||| |||||||| |||||||| ||||||||||| |
Sbjct: 602 gaatggaagattatattgcttaggtatttcaatcctgttggtgcacatcctagtggtgac 661
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || ||||| || || ||||| |||||||| ||||||| ||| || ||||| ||
Sbjct: 662 attggtgaagaccctcgtggtattccaaacaatctcatgccctttgtacaacaagtggct 721
Query: 153 gttggtaggag 163
|||||||||||
Sbjct: 722 gttggtaggag 732
>gb|AY117180.1| Arabidopsis thaliana putative UDP-galactose 4-epimerase (At4g10960)
mRNA, complete cds
Length = 1087
Score = 85.7 bits (43), Expect = 2e-014
Identities = 109/131 (83%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
||||||||||| || || |||||||| |||||||| |||||||| ||||||||||| |
Sbjct: 520 gaatggaagattatattgcttaggtatttcaatcctgttggtgcacatcctagtggtgac 579
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || ||||| || || ||||| |||||||| ||||||| ||| || ||||| ||
Sbjct: 580 attggtgaagaccctcgtggtattccaaacaatctcatgccctttgtacaacaagtggct 639
Query: 153 gttggtaggag 163
|||||||||||
Sbjct: 640 gttggtaggag 650
>emb|BX827643.1|CNS0A2DZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS8ZA03 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1272
Score = 85.7 bits (43), Expect = 2e-014
Identities = 109/131 (83%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
||||||||||| || || |||||||| |||||||| |||||||| ||||||||||| |
Sbjct: 568 gaatggaagattatattgcttaggtatttcaatcctgttggtgcacatcctagtggtgac 627
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || ||||| || || ||||| |||||||| ||||||| ||| || ||||| ||
Sbjct: 628 attggtgaagaccctcgtggtattccaaacaatctcatgccctttgtacaacaagtggct 687
Query: 153 gttggtaggag 163
|||||||||||
Sbjct: 688 gttggtaggag 698
>emb|BX827147.1|CNS0A3P3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS16ZC07 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1253
Score = 85.7 bits (43), Expect = 2e-014
Identities = 109/131 (83%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
||||||||||| || || |||||||| |||||||| |||||||| ||||||||||| |
Sbjct: 585 gaatggaagattatattgcttaggtatttcaatcctgttggtgcacatcctagtggtgac 644
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || ||||| || || ||||| |||||||| ||||||| ||| || ||||| ||
Sbjct: 645 attggtgaagaccctcgtggtattccaaacaatctcatgccctttgtacaacaagtggct 704
Query: 153 gttggtaggag 163
|||||||||||
Sbjct: 705 gttggtaggag 715
>emb|BX827895.1|CNS0A3UR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH32ZD08 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1339
Score = 85.7 bits (43), Expect = 2e-014
Identities = 109/131 (83%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
||||||||||| || || |||||||| |||||||| |||||||| ||||||||||| |
Sbjct: 643 gaatggaagattatattgcttaggtatttcaatcctgttggtgcacatcctagtggtgac 702
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || ||||| || || ||||| |||||||| ||||||| ||| || ||||| ||
Sbjct: 703 attggtgaagaccctcgtggtattccaaacaatctcatgccctttgtacaacaagtggct 762
Query: 153 gttggtaggag 163
|||||||||||
Sbjct: 763 gttggtaggag 773
>emb|BX826665.1|CNS0A44W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB52ZC08 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1305
Score = 85.7 bits (43), Expect = 2e-014
Identities = 109/131 (83%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
||||||||||| || || |||||||| |||||||| |||||||| ||||||||||| |
Sbjct: 582 gaatggaagattatattgcttaggtatttcaatcctgttggtgcacatcctagtggtgac 641
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || ||||| || || ||||| |||||||| ||||||| ||| || ||||| ||
Sbjct: 642 attggtgaagaccctcgtggtattccaaacaatctcatgccctttgtacaacaagtggct 701
Query: 153 gttggtaggag 163
|||||||||||
Sbjct: 702 gttggtaggag 712
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 85.7 bits (43), Expect = 2e-014
Identities = 109/131 (83%)
Strand = Plus / Minus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
||||||||||| || || |||||||| |||||||| |||||||| ||||||||||| |
Sbjct: 2629722 gaatggaagattatattgcttaggtatttcaatcctgttggtgcacatcctagtggtgac 2629663
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || ||||| || || ||||| |||||||| ||||||| ||| || ||||| ||
Sbjct: 2629662 attggtgaagaccctcgtggtattccaaacaatctcatgccctttgtacaacaagtggct 2629603
Query: 153 gttggtaggag 163
|||||||||||
Sbjct: 2629602 gttggtaggag 2629592
Score = 81.8 bits (41), Expect = 2e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
|||||||||||||| || ||||| |||||||| || |||||||| ||||||||||| ||
Sbjct: 8345409 gaatggaagatcatattgcttagatacttcaaccctgttggtgcacatcctagtggttac 8345468
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || || || | ||| ||||||||||||| ||||| ||||| || ||||||||
Sbjct: 8345469 attggtgaagatcctcttggagttcccaacaatctcatgccttatgtccaacaagttgca 8345528
Query: 153 gttgg 157
|||||
Sbjct: 8345529 gttgg 8345533
>emb|AL049525.1|ATF25I24 Arabidopsis thaliana DNA chromosome 4, BAC clone F25I24 (ESSA project)
Length = 95799
Score = 85.7 bits (43), Expect = 2e-014
Identities = 109/131 (83%)
Strand = Plus / Minus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
||||||||||| || || |||||||| |||||||| |||||||| ||||||||||| |
Sbjct: 73339 gaatggaagattatattgcttaggtatttcaatcctgttggtgcacatcctagtggtgac 73280
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || ||||| || || ||||| |||||||| ||||||| ||| || ||||| ||
Sbjct: 73279 attggtgaagaccctcgtggtattccaaacaatctcatgccctttgtacaacaagtggct 73220
Query: 153 gttggtaggag 163
|||||||||||
Sbjct: 73219 gttggtaggag 73209
>emb|AL161518.2|ATCHRIV30 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 30
Length = 198136
Score = 85.7 bits (43), Expect = 2e-014
Identities = 109/131 (83%)
Strand = Plus / Minus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
||||||||||| || || |||||||| |||||||| |||||||| ||||||||||| |
Sbjct: 154363 gaatggaagattatattgcttaggtatttcaatcctgttggtgcacatcctagtggtgac 154304
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || ||||| || || ||||| |||||||| ||||||| ||| || ||||| ||
Sbjct: 154303 attggtgaagaccctcgtggtattccaaacaatctcatgccctttgtacaacaagtggct 154244
Query: 153 gttggtaggag 163
|||||||||||
Sbjct: 154243 gttggtaggag 154233
>ref|NM_117165.2| Arabidopsis thaliana triacylglycerol lipase AT4G10955 mRNA,
complete cds
Length = 2749
Score = 85.7 bits (43), Expect = 2e-014
Identities = 109/131 (83%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
||||||||||| || || |||||||| |||||||| |||||||| ||||||||||| |
Sbjct: 603 gaatggaagattatattgcttaggtatttcaatcctgttggtgcacatcctagtggtgac 662
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || ||||| || || ||||| |||||||| ||||||| ||| || ||||| ||
Sbjct: 663 attggtgaagaccctcgtggtattccaaacaatctcatgccctttgtacaacaagtggct 722
Query: 153 gttggtaggag 163
|||||||||||
Sbjct: 723 gttggtaggag 733
>ref|NM_117166.2| Arabidopsis thaliana NAD binding / UDP-glucose 4-epimerase/
catalytic AT4G10960 mRNA, complete cds
Length = 2827
Score = 85.7 bits (43), Expect = 2e-014
Identities = 109/131 (83%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
||||||||||| || || |||||||| |||||||| |||||||| ||||||||||| |
Sbjct: 598 gaatggaagattatattgcttaggtatttcaatcctgttggtgcacatcctagtggtgac 657
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || ||||| || || ||||| |||||||| ||||||| ||| || ||||| ||
Sbjct: 658 attggtgaagaccctcgtggtattccaaacaatctcatgccctttgtacaacaagtggct 717
Query: 153 gttggtaggag 163
|||||||||||
Sbjct: 718 gttggtaggag 728
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 85.7 bits (43), Expect = 2e-014
Identities = 109/131 (83%)
Strand = Plus / Minus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
||||||||||| || || |||||||| |||||||| |||||||| ||||||||||| |
Sbjct: 6716987 gaatggaagattatattgcttaggtatttcaatcctgttggtgcacatcctagtggtgac 6716928
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || ||||| || || ||||| |||||||| ||||||| ||| || ||||| ||
Sbjct: 6716927 attggtgaagaccctcgtggtattccaaacaatctcatgccctttgtacaacaagtggct 6716868
Query: 153 gttggtaggag 163
|||||||||||
Sbjct: 6716867 gttggtaggag 6716857
Score = 81.8 bits (41), Expect = 2e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
|||||||||||||| || ||||| |||||||| || |||||||| ||||||||||| ||
Sbjct: 12432647 gaatggaagatcatattgcttagatacttcaaccctgttggtgcacatcctagtggttac 12432706
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || || || | ||| ||||||||||||| ||||| ||||| || ||||||||
Sbjct: 12432707 attggtgaagatcctcttggagttcccaacaatctcatgccttatgtccaacaagttgca 12432766
Query: 153 gttgg 157
|||||
Sbjct: 12432767 gttgg 12432771
>gb|AY084615.1| Arabidopsis thaliana clone 11330 mRNA, complete sequence
Length = 1316
Score = 81.8 bits (41), Expect = 2e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
|||||||||||||| || ||||| |||||||| || |||||||| ||||||||||| ||
Sbjct: 582 gaatggaagatcatattgcttagatacttcaaccctgttggtgcacatcctagtggttac 641
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || || || | ||| ||||||||||||| ||||| ||||| || ||||||||
Sbjct: 642 attggtgaagatcctcttggagttcccaacaatctcatgccttatgtccaacaagttgca 701
Query: 153 gttgg 157
|||||
Sbjct: 702 gttgg 706
>gb|BT008539.1| Arabidopsis thaliana clone U51171 putative UDPglucose 4-epimerase
(At4g23920) mRNA, complete cds
Length = 1084
Score = 81.8 bits (41), Expect = 2e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
|||||||||||||| || ||||| |||||||| || |||||||| ||||||||||| ||
Sbjct: 517 gaatggaagatcatattgcttagatacttcaaccctgttggtgcacatcctagtggttac 576
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || || || | ||| ||||||||||||| ||||| ||||| || ||||||||
Sbjct: 577 attggtgaagatcctcttggagttcccaacaatctcatgccttatgtccaacaagttgca 636
Query: 153 gttgg 157
|||||
Sbjct: 637 gttgg 641
>dbj|AK118722.1| Arabidopsis thaliana At4g23920 mRNA for putative UDPglucose
4-epimerase, complete cds, clone: RAFL21-04-N18
Length = 1393
Score = 81.8 bits (41), Expect = 2e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
|||||||||||||| || ||||| |||||||| || |||||||| ||||||||||| ||
Sbjct: 667 gaatggaagatcatattgcttagatacttcaaccctgttggtgcacatcctagtggttac 726
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || || || | ||| ||||||||||||| ||||| ||||| || ||||||||
Sbjct: 727 attggtgaagatcctcttggagttcccaacaatctcatgccttatgtccaacaagttgca 786
Query: 153 gttgg 157
|||||
Sbjct: 787 gttgg 791
>emb|AL078468.1|ATT32A16 Arabidopsis thaliana DNA chromosome 4, BAC clone T32A16 (ESSA project)
Length = 89826
Score = 81.8 bits (41), Expect = 2e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
|||||||||||||| || ||||| |||||||| || |||||||| ||||||||||| ||
Sbjct: 42116 gaatggaagatcatattgcttagatacttcaaccctgttggtgcacatcctagtggttac 42175
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || || || | ||| ||||||||||||| ||||| ||||| || ||||||||
Sbjct: 42176 attggtgaagatcctcttggagttcccaacaatctcatgccttatgtccaacaagttgca 42235
Query: 153 gttgg 157
|||||
Sbjct: 42236 gttgg 42240
>emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 60
Length = 196677
Score = 81.8 bits (41), Expect = 2e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
|||||||||||||| || ||||| |||||||| || |||||||| ||||||||||| ||
Sbjct: 92022 gaatggaagatcatattgcttagatacttcaaccctgttggtgcacatcctagtggttac 92081
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || || || | ||| ||||||||||||| ||||| ||||| || ||||||||
Sbjct: 92082 attggtgaagatcctcttggagttcccaacaatctcatgccttatgtccaacaagttgca 92141
Query: 153 gttgg 157
|||||
Sbjct: 92142 gttgg 92146
>ref|NM_118524.2| Arabidopsis thaliana NAD binding / UDP-glucose 4-epimerase/
catalytic AT4G23920 mRNA, complete cds
Length = 1390
Score = 81.8 bits (41), Expect = 2e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
|||||||||||||| || ||||| |||||||| || |||||||| ||||||||||| ||
Sbjct: 656 gaatggaagatcatattgcttagatacttcaaccctgttggtgcacatcctagtggttac 715
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || || || | ||| ||||||||||||| ||||| ||||| || ||||||||
Sbjct: 716 attggtgaagatcctcttggagttcccaacaatctcatgccttatgtccaacaagttgca 775
Query: 153 gttgg 157
|||||
Sbjct: 776 gttgg 780
>gb|AY085528.1| Arabidopsis thaliana clone 15608 mRNA, complete sequence
Length = 1286
Score = 77.8 bits (39), Expect = 4e-012
Identities = 108/131 (82%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
||||||||||| || || |||||||| |||||||| |||||||| ||||||||||| |
Sbjct: 598 gaatggaagattatattgcttaggtatttcaatcctgttggtgcacatcctagtggtgac 657
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || ||||| || || ||||| |||||||| ||||| | ||| || ||||| ||
Sbjct: 658 attggtgaagaccctcgtggtattccaaacaatctcatgccttttgtacaacaagtcgct 717
Query: 153 gttggtaggag 163
|||||||||||
Sbjct: 718 gttggtaggag 728
>gb|BZ660593.1|BZ660593 SALK_024044.33.30.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_024044.33.30.x,
DNA sequence
Length = 365
Score = 73.8 bits (37), Expect = 6e-011
Identities = 103/125 (82%)
Strand = Plus / Minus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctcatcctagtggatat 92
|||||||||||||| || ||||| |||||||| || |||||||| |||| |||||| ||
Sbjct: 318 gaatggaagatcatattgcttagatacttcaaccctgttggtgcacatcatagtggttac 259
Query: 93 cttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcagcaagttgcg 152
|||| || || || | ||| ||||||||||||| ||||| ||||| || ||||||||
Sbjct: 258 attggtgaagatcctcttggagttcccaacaatctcatgccttatgtccaacaagttgca 199
Query: 153 gttgg 157
|||||
Sbjct: 198 gttgg 194
>gb|BT011226.1| Arabidopsis thaliana
Length = 1368
Score = 58.0 bits (29), Expect = 4e-006
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 309 tacaaccttggaaccggaagaggtacatctgtgctggagattgttaaagcatttgagaag 368
|||||||| |||||||||| ||| ||| | ||| ||||||| ||| | |||||||||||
Sbjct: 829 tacaacctgggaaccggaaaaggaacaacagtgttggagatggttgatgcatttgagaaa 888
Query: 369 gcttctgggaagaaaat 385
|||||||| | ||||||
Sbjct: 889 gcttctggaatgaaaat 905
>emb|BX818643.1|CNS0AAWT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL8ZE11 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1254
Score = 58.0 bits (29), Expect = 4e-006
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 309 tacaaccttggaaccggaagaggtacatctgtgctggagattgttaaagcatttgagaag 368
|||||||| |||||||||| ||| ||| | ||| ||||||| ||| | |||||||||||
Sbjct: 843 tacaacctgggaaccggaaaaggaacaacagtgttggagatggttgatgcatttgagaaa 902
Query: 369 gcttctgggaagaaaat 385
|||||||| | ||||||
Sbjct: 903 gcttctggaatgaaaat 919
>emb|BX817161.1|CNS0ABLN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH8ZE10 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1388
Score = 58.0 bits (29), Expect = 4e-006
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 309 tacaaccttggaaccggaagaggtacatctgtgctggagattgttaaagcatttgagaag 368
|||||||| |||||||||| ||| ||| | ||| ||||||| ||| | |||||||||||
Sbjct: 837 tacaacctgggaaccggaaaaggaacaacagtgttggagatggttgatgcatttgagaaa 896
Query: 369 gcttctgggaagaaaat 385
|||||||| | ||||||
Sbjct: 897 gcttctggaatgaaaat 913
>emb|BX813435.1|CNS0AC0X Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB17ZE12 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1315
Score = 58.0 bits (29), Expect = 4e-006
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 309 tacaaccttggaaccggaagaggtacatctgtgctggagattgttaaagcatttgagaag 368
|||||||| |||||||||| ||| ||| | ||| ||||||| ||| | |||||||||||
Sbjct: 813 tacaacctgggaaccggaaaaggaacaacagtgttggagatggttgatgcatttgagaaa 872
Query: 369 gcttctgggaagaaaat 385
|||||||| | ||||||
Sbjct: 873 gcttctggaatgaaaat 889
>emb|BX815944.1|CNS0ABVK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH19ZC12 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1353
Score = 58.0 bits (29), Expect = 4e-006
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 309 tacaaccttggaaccggaagaggtacatctgtgctggagattgttaaagcatttgagaag 368
|||||||| |||||||||| ||| ||| | ||| ||||||| ||| | |||||||||||
Sbjct: 848 tacaacctgggaaccggaaaaggaacaacagtgttggagatggttgatgcatttgagaaa 907
Query: 369 gcttctgggaagaaaat 385
|||||||| | ||||||
Sbjct: 908 gcttctggaatgaaaat 924
>emb|BX816595.1|CNS0ABW1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH58ZA04 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1362
Score = 58.0 bits (29), Expect = 4e-006
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 309 tacaaccttggaaccggaagaggtacatctgtgctggagattgttaaagcatttgagaag 368
|||||||| |||||||||| ||| ||| | ||| ||||||| ||| | |||||||||||
Sbjct: 849 tacaacctgggaaccggaaaaggaacaacagtgttggagatggttgatgcatttgagaaa 908
Query: 369 gcttctgggaagaaaat 385
|||||||| | ||||||
Sbjct: 909 gcttctggaatgaaaat 925
>gb|BT012154.1| Arabidopsis thaliana At1g64440 mRNA, complete cds
Length = 1047
Score = 58.0 bits (29), Expect = 4e-006
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 309 tacaaccttggaaccggaagaggtacatctgtgctggagattgttaaagcatttgagaag 368
|||||||| |||||||||| ||| ||| | ||| ||||||| ||| | |||||||||||
Sbjct: 790 tacaacctgggaaccggaaaaggaacaacagtgttggagatggttgatgcatttgagaaa 849
Query: 369 gcttctgggaagaaaat 385
|||||||| | ||||||
Sbjct: 850 gcttctggaatgaaaat 866
>ref|NM_105119.3| Arabidopsis thaliana RHD1 (ROOT HAIR DEFECTIVE 1) AT1G64440 (RHD1)
mRNA, complete cds
Length = 1440
Score = 58.0 bits (29), Expect = 4e-006
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 309 tacaaccttggaaccggaagaggtacatctgtgctggagattgttaaagcatttgagaag 368
|||||||| |||||||||| ||| ||| | ||| ||||||| ||| | |||||||||||
Sbjct: 849 tacaacctgggaaccggaaaaggaacaacagtgttggagatggttgatgcatttgagaaa 908
Query: 369 gcttctgggaagaaaat 385
|||||||| | ||||||
Sbjct: 909 gcttctggaatgaaaat 925
>gb|AC009519.4|AC009519 Genomic sequence for Arabidopsis thaliana BAC F1N19 from chromosome
I, complete sequence
Length = 113172
Score = 56.0 bits (28), Expect = 1e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 309 tacaaccttggaaccggaagaggtacatctgtgctggagattgttaaagcatttgagaag 368
|||||||| |||||||||| ||| ||| | ||| ||||||| ||| | |||||||||||
Sbjct: 7367 tacaacctgggaaccggaaaaggaacaacagtgttggagatggttgatgcatttgagaaa 7426
Query: 369 gcttctgg 376
||||||||
Sbjct: 7427 gcttctgg 7434
>gb|AC066689.5|AC066689 Arabidopsis thaliana chromosome 1 BAC F15H21 genomic sequence,
complete sequence
Length = 96887
Score = 56.0 bits (28), Expect = 1e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 309 tacaaccttggaaccggaagaggtacatctgtgctggagattgttaaagcatttgagaag 368
|||||||| |||||||||| ||| ||| | ||| ||||||| ||| | |||||||||||
Sbjct: 4595 tacaacctgggaaccggaaaaggaacaacagtgttggagatggttgatgcatttgagaaa 4536
Query: 369 gcttctgg 376
||||||||
Sbjct: 4535 gcttctgg 4528
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 56.0 bits (28), Expect = 1e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 309 tacaaccttggaaccggaagaggtacatctgtgctggagattgttaaagcatttgagaag 368
|||||||| |||||||||| ||| ||| | ||| ||||||| ||| | |||||||||||
Sbjct: 8180394 tacaacctgggaaccggaaaaggaacaacagtgttggagatggttgatgcatttgagaaa 8180453
Query: 369 gcttctgg 376
||||||||
Sbjct: 8180454 gcttctgg 8180461
Score = 46.1 bits (23), Expect = 0.014
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctca 79
||||||||||| ||| | || |||||||||||||| ||||| |||||
Sbjct: 7669762 gaatggaagataattcttctgaggtacttcaatccggttggagctca 7669716
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 56.0 bits (28), Expect = 1e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 309 tacaaccttggaaccggaagaggtacatctgtgctggagattgttaaagcatttgagaag 368
|||||||| |||||||||| ||| ||| | ||| ||||||| ||| | |||||||||||
Sbjct: 23942742 tacaacctgggaaccggaaaaggaacaacagtgttggagatggttgatgcatttgagaaa 23942801
Query: 369 gcttctgg 376
||||||||
Sbjct: 23942802 gcttctgg 23942809
Score = 46.1 bits (23), Expect = 0.014
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctca 79
||||||||||| ||| | || |||||||||||||| ||||| |||||
Sbjct: 23432111 gaatggaagataattcttctgaggtacttcaatccggttggagctca 23432065
>emb|BX841511.1|CNS09YH0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB11ZF11 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1136
Score = 52.0 bits (26), Expect = 2e-004
Identities = 86/106 (81%)
Strand = Plus / Plus
Query: 46 ttttacttaggtacttcaatccagttggtgctcatcctagtggatatcttggcgaggacc 105
|||| ||||| |||||||| || |||||||| ||||||||||| || |||| || || |
Sbjct: 578 tttttcttagatacttcaaccctgttggtgcacatcctagtggttacattggtgaagatc 637
Query: 106 cacgaggaattcccaacaatcttatgccctatgttcagcaagttgc 151
| | ||| | ||||||||||| ||||| ||||| || ||||||||
Sbjct: 638 ctcttggagtacccaacaatctcatgccttatgtccaacaagttgc 683
>gb|AY094481.1| Arabidopsis thaliana At1g63180/F16M19_8 mRNA sequence
Length = 1240
Score = 46.1 bits (23), Expect = 0.014
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctca 79
||||||||||| ||| | || |||||||||||||| ||||| |||||
Sbjct: 552 gaatggaagataattcttctgaggtacttcaatccggttggagctca 598
Score = 44.1 bits (22), Expect = 0.054
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 467 ctggaaagcaaaatacggtattgaagagatgtgccgcgaccaatggaactgggc 520
|||||| |||||||| || |||| ||||||||| | || ||||||||||||||
Sbjct: 986 ctggaaggcaaaatatggagttgatgagatgtgcagagatcaatggaactgggc 1039
>gb|AY085887.1| Arabidopsis thaliana clone 1932 mRNA, complete sequence
Length = 1397
Score = 46.1 bits (23), Expect = 0.014
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctca 79
||||||||||| ||| | || |||||||||||||| ||||| |||||
Sbjct: 728 gaatggaagataattcttctgaggtacttcaatccggttggagctca 774
Score = 44.1 bits (22), Expect = 0.054
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 467 ctggaaagcaaaatacggtattgaagagatgtgccgcgaccaatggaactgggc 520
|||||| |||||||| || |||| ||||||||| | || ||||||||||||||
Sbjct: 1162 ctggaaggcaaaatatggagttgatgagatgtgcagagatcaatggaactgggc 1215
>gb|AC010795.5|AC010795 Arabidopsis thaliana chromosome 1 BAC F16M19 genomic sequence, complete
sequence
Length = 100512
Score = 46.1 bits (23), Expect = 0.014
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctca 79
||||||||||| ||| | || |||||||||||||| ||||| |||||
Sbjct: 79673 gaatggaagataattcttctgaggtacttcaatccggttggagctca 79627
>dbj|AK117913.1| Arabidopsis thaliana At1g63180 mRNA for putative uridine
diphosphate glucose epimerase, complete cds, clone:
RAFL19-09-L10
Length = 1263
Score = 46.1 bits (23), Expect = 0.014
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctca 79
||||||||||| ||| | || |||||||||||||| ||||| |||||
Sbjct: 583 gaatggaagataattcttctgaggtacttcaatccggttggagctca 629
Score = 44.1 bits (22), Expect = 0.054
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 467 ctggaaagcaaaatacggtattgaagagatgtgccgcgaccaatggaactgggc 520
|||||| |||||||| || |||| ||||||||| | || ||||||||||||||
Sbjct: 1017 ctggaaggcaaaatatggagttgatgagatgtgcagagatcaatggaactgggc 1070
>ref|NM_104996.3| Arabidopsis thaliana NAD binding / UDP-glucose 4-epimerase/
catalytic AT1G63180 mRNA, complete cds
Length = 1393
Score = 46.1 bits (23), Expect = 0.014
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttggtgctca 79
||||||||||| ||| | || |||||||||||||| ||||| |||||
Sbjct: 721 gaatggaagataattcttctgaggtacttcaatccggttggagctca 767
Score = 44.1 bits (22), Expect = 0.054
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 467 ctggaaagcaaaatacggtattgaagagatgtgccgcgaccaatggaactgggc 520
|||||| |||||||| || |||| ||||||||| | || ||||||||||||||
Sbjct: 1155 ctggaaggcaaaatatggagttgatgagatgtgcagagatcaatggaactgggc 1208
>gb|F13966.1|F13966 ATTS4888 Versailles-VB Arabidopsis thaliana cDNA clone VBVVG02 3'
similar to UDP-GLUCOSE 4-EPIMERASE, mRNA sequence
Length = 414
Score = 44.1 bits (22), Expect = 0.054
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 467 ctggaaagcaaaatacggtattgaagagatgtgccgcgaccaatggaactgggc 520
|||||| |||||||| || |||| ||||||||| | || ||||||||||||||
Sbjct: 234 ctggaaggcaaaatatggagttgatgagatgtgcagagatcaatggaactgggc 181
>gb|AU229988.1|AU229988 AU229988 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-09-L10 3',
mRNA sequence
Length = 402
Score = 44.1 bits (22), Expect = 0.054
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 467 ctggaaagcaaaatacggtattgaagagatgtgccgcgaccaatggaactgggc 520
|||||| |||||||| || |||| ||||||||| | || ||||||||||||||
Sbjct: 240 ctggaaggcaaaatatggagttgatgagatgtgcagagatcaatggaactgggc 187
>gb|BP622585.1|BP622585 BP622585 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-03-L19 3',
mRNA sequence
Length = 374
Score = 44.1 bits (22), Expect = 0.054
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 467 ctggaaagcaaaatacggtattgaagagatgtgccgcgaccaatggaactgggc 520
|||||| |||||||| || |||| ||||||||| | || ||||||||||||||
Sbjct: 238 ctggaaggcaaaatatggagttgatgagatgtgcagagatcaatggaactgggc 185
>gb|BP639411.1|BP639411 BP639411 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-47-L07 3',
mRNA sequence
Length = 404
Score = 44.1 bits (22), Expect = 0.054
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 467 ctggaaagcaaaatacggtattgaagagatgtgccgcgaccaatggaactgggc 520
|||||| |||||||| || |||| ||||||||| | || ||||||||||||||
Sbjct: 208 ctggaaggcaaaatatggagttgatgagatgtgcagagatcaatggaactgggc 155
>emb|BX663925.1| Arabidopsis thaliana transposon insertion STS GT_5.51331,
sequence tagged site
Length = 101
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 33 gaatggaagatcattttacttaggtacttcaatccagttgg 73
|||||||||||||| || ||||| |||||||| || |||||
Sbjct: 65 gaatggaagatcatattgcttagatacttcaaccctgttgg 25
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 517,712
Number of Sequences: 1013581
Number of extensions: 517712
Number of successful extensions: 35007
Number of sequences better than 0.5: 45
Number of HSP's better than 0.5 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33634
Number of HSP's gapped (non-prelim): 1364
length of query: 1175
length of database: 908,940,872
effective HSP length: 20
effective length of query: 1155
effective length of database: 888,669,252
effective search space: 1026412986060
effective search space used: 1026412986060
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)