BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161295.2.1
(1475 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV553003.1|AV553003 AV553003 Arabidopsis thaliana roots ... 285 1e-074
gb|AY050389.1| Arabidopsis thaliana AT3g62830/F26K9_260 mRN... 285 1e-074
gb|AY143897.1| Arabidopsis thaliana At3g62830/F26K9_260 mRN... 285 1e-074
emb|BX825822.1|CNS0A4P6 Arabidopsis thaliana Full-length cD... 285 1e-074
ref|NM_116148.1| Arabidopsis thaliana UXS2 (UDP-GLUCURONIC ... 285 1e-074
emb|Z49239.1|ATD18MR A.thaliana mRNA for putative dTDP-gluc... 270 6e-070
gb|AF361617.1| Arabidopsis thaliana AT3g62830/F26K9_260 mRN... 270 6e-070
gb|AF387788.1| Arabidopsis thaliana UDP-glucuronic acid dec... 270 6e-070
gb|AV550208.1|AV550208 AV550208 Arabidopsis thaliana roots ... 264 4e-068
emb|AX505495.1| Sequence 190 from Patent WO0216655 218 2e-054
gb|BT022016.1| Arabidopsis thaliana At2g47650 gene, complet... 218 2e-054
ref|NM_130333.1| Arabidopsis thaliana UXS4 (UDP-XYLOSE SYNT... 218 2e-054
gb|CB185735.2|CB185735 EST00661 Arabidopsis avirulent Pseud... 196 8e-048
gb|AV541133.1|AV541133 AV541133 Arabidopsis thaliana roots ... 176 7e-042
gb|N37324.1|N37324 18551 Lambda-PRL2 Arabidopsis thaliana c... 163 1e-037
gb|AV782529.1|AV782529 AV782529 RAFL4 Arabidopsis thaliana ... 141 4e-031
gb|AV521021.1|AV521021 AV521021 Arabidopsis thaliana aboveg... 141 4e-031
gb|AV537418.1|AV537418 AV537418 Arabidopsis thaliana roots ... 141 4e-031
gb|AV538824.1|AV538824 AV538824 Arabidopsis thaliana roots ... 139 2e-030
gb|AV541838.1|AV541838 AV541838 Arabidopsis thaliana roots ... 131 4e-028
gb|AV533768.1|AV533768 AV533768 Arabidopsis thaliana flower... 117 6e-024
gb|R90332.1|R90332 16687 Lambda-PRL2 Arabidopsis thaliana c... 115 2e-023
gb|AV551147.1|AV551147 AV551147 Arabidopsis thaliana roots ... 96 2e-017
gb|CB260122.1|CB260122 94-E9601-013-003-K24-t7r MPIZ-ADIS-0... 94 8e-017
gb|AV549274.1|AV549274 AV549274 Arabidopsis thaliana roots ... 94 8e-017
gb|AY065075.1| Arabidopsis thaliana dTDP-glucose 4-6-dehydr... 94 8e-017
gb|AF387787.1| Arabidopsis thaliana UDP-glucuronic acid dec... 94 8e-017
gb|BT003355.1| Arabidopsis thaliana dTDP-glucose 4-6-dehydr... 94 8e-017
emb|BX822635.1|CNS0A7MG Arabidopsis thaliana Full-length cD... 94 8e-017
emb|BX823214.1|CNS0A7KG Arabidopsis thaliana Full-length cD... 94 8e-017
ref|NM_180363.1| Arabidopsis thaliana UXS1 (UDP-GLUCURONIC ... 94 8e-017
ref|NM_115212.2| Arabidopsis thaliana UXS1 (UDP-GLUCURONIC ... 94 8e-017
gb|BZ354118.1|BZ354118 SALK_123223.47.80.x Arabidopsis thal... 92 3e-016
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 92 3e-016
emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome ... 92 3e-016
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 92 3e-016
gb|CB255558.1|CB255558 38-E010697-019-002-K10-T7R MPIZ-ADIS... 90 1e-015
emb|BX823176.1|CNS0A7M4 Arabidopsis thaliana Full-length cD... 86 2e-014
gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B... 84 8e-014
gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A... 84 8e-014
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 84 8e-014
gb|N38350.1|N38350 19577 Lambda-PRL2 Arabidopsis thaliana c... 70 1e-009
gb|BE530488.1|BE530488 M77D03STM Arabidopsis developing see... 66 2e-008
emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome ... 62 3e-007
gb|AQ967293.1|AQ967293 LERIQ83TF LERG Arabidopsis thaliana ... 58 5e-006
gb|AQ969939.1|AQ969939 LERJR50TF LERG Arabidopsis thaliana ... 58 5e-006
gb|BP582514.1|BP582514 BP582514 RAFL14 Arabidopsis thaliana... 58 5e-006
gb|BP585895.1|BP585895 BP585895 RAFL15 Arabidopsis thaliana... 58 5e-006
gb|AQ969940.1|AQ969940 LERJR50TR LERG Arabidopsis thaliana ... 56 2e-005
gb|BX839560.1|BX839560 BX839560 Arabidopsis thaliana Adult ... 52 3e-004
gb|CK121683.1|CK121683 202b24.p1 AtM1 Arabidopsis thaliana ... 52 3e-004
gb|AY072098.1| Arabidopsis thaliana putative dTDP-glucose 4... 52 3e-004
gb|AY096586.1| Arabidopsis thaliana putative dTDP-glucose 4... 52 3e-004
gb|AY087118.1| Arabidopsis thaliana clone 31901 mRNA, compl... 52 3e-004
emb|BX824968.1|CNS0A6QT Arabidopsis thaliana Full-length cD... 52 3e-004
emb|BX823718.1|CNS0A7QP Arabidopsis thaliana Full-length cD... 52 3e-004
ref|NM_114511.2| Arabidopsis thaliana UXS5; catalytic AT3G4... 52 3e-004
ref|NM_001035743.1| Arabidopsis thaliana UXS5; catalytic AT... 52 3e-004
gb|H76303.1|H76303 18008 Lambda-PRL2 Arabidopsis thaliana c... 50 0.001
gb|BE530706.1|BE530706 M78I20STM Arabidopsis developing see... 50 0.001
gb|AV782290.1|AV782290 AV782290 RAFL4 Arabidopsis thaliana ... 50 0.001
gb|BP571979.1|BP571979 BP571979 RAFL14 Arabidopsis thaliana... 50 0.001
gb|CD530058.1|CD530058 27F15 Arabidopsis Leaf Senescence Li... 48 0.004
gb|BX834349.1|BX834349 BX834349 Arabidopsis thaliana Adult ... 48 0.004
gb|AV439961.1|AV439961 AV439961 Arabidopsis thaliana above-... 48 0.004
gb|AI100480.1|AI100480 34855 Lambda-PRL2 Arabidopsis thalia... 46 0.017
gb|BP564295.1|BP564295 BP564295 RAFL14 Arabidopsis thaliana... 46 0.017
gb|BP575347.1|BP575347 BP575347 RAFL14 Arabidopsis thaliana... 46 0.017
gb|AV567402.1|AV567402 AV567402 Arabidopsis thaliana green ... 44 0.068
gb|BP593145.1|BP593145 BP593145 RAFL15 Arabidopsis thaliana... 44 0.068
gb|CW800989.1|CW800989 WiscDsLox293-296invD4 Arabidopsis th... 42 0.27
gb|BE521467.1|BE521467 M19G5STM Arabidopsis developing seed... 42 0.27
gb|AV788561.1|AV788561 AV788561 RAFL6 Arabidopsis thaliana ... 42 0.27
gb|AV814478.1|AV814478 AV814478 RAFL9 Arabidopsis thaliana ... 42 0.27
gb|AV829784.1|AV829784 AV829784 RAFL9 Arabidopsis thaliana ... 42 0.27
gb|AU237002.1|AU237002 AU237002 RAFL15 Arabidopsis thaliana... 42 0.27
gb|BP565000.1|BP565000 BP565000 RAFL14 Arabidopsis thaliana... 42 0.27
emb|AL133298.1|ATF18L15 Arabidopsis thaliana DNA chromosome... 42 0.27
gb|B97419.1|B97419 T33K13TF TAMU Arabidopsis thaliana genom... 40 1.1
gb|AV820936.1|AV820936 AV820936 RAFL11 Arabidopsis thaliana... 40 1.1
gb|AV822186.1|AV822186 AV822186 RAFL5 Arabidopsis thaliana ... 40 1.1
gb|CB260697.1|CB260697 73-E9517-012-003-A10-T7R MPIZ-ADIS-0... 40 1.1
gb|AV527350.1|AV527350 AV527350 Arabidopsis thaliana aboveg... 40 1.1
gb|BP592035.1|BP592035 BP592035 RAFL15 Arabidopsis thaliana... 40 1.1
gb|CB252277.1|CB252277 30-E018429-019-008-L07-T7R MPIZ-ADIS... 40 1.1
gb|AF375442.1| Arabidopsis thaliana AT5g59290/mnc17_180 mRN... 40 1.1
gb|AY093958.1| Arabidopsis thaliana AT5g59290/mnc17_180 mRN... 40 1.1
gb|AF387789.1| Arabidopsis thaliana UDP-glucuronic acid dec... 40 1.1
emb|AJ530507.1|ATH530507 Arabidopsis thaliana T-DNA flankin... 40 1.1
gb|AY088443.1| Arabidopsis thaliana clone 6701 mRNA, comple... 40 1.1
emb|BX832416.1|CNS0A12Y Arabidopsis thaliana Full-length cD... 40 1.1
dbj|AB016890.1| Arabidopsis thaliana genomic DNA, chromosom... 40 1.1
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 40 1.1
ref|NM_125319.2| Arabidopsis thaliana UXS3 (UDP-GLUCURONIC ... 40 1.1
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 40 1.1
gb|B27400.1|B27400 T7A14TF TAMU Arabidopsis thaliana genomi... 38 4.2
gb|CL474567.1|CL474567 SAIL_221_H03.v1 SAIL Collection Arab... 38 4.2
emb|CR401929.1| Arabidopsis thaliana T-DNA flanking sequenc... 38 4.2
gb|BE039137.1|BE039137 AB14B03 AB Arabidopsis thaliana cDNA... 38 4.2
gb|AU228060.1|AU228060 AU228060 RAFL15 Arabidopsis thaliana... 38 4.2
gb|AU228873.1|AU228873 AU228873 RAFL16 Arabidopsis thaliana... 38 4.2
gb|AV555321.1|AV555321 AV555321 Arabidopsis thaliana green ... 38 4.2
gb|AV559947.1|AV559947 AV559947 Arabidopsis thaliana green ... 38 4.2
gb|AV566547.1|AV566547 AV566547 Arabidopsis thaliana green ... 38 4.2
gb|BP605726.1|BP605726 BP605726 RAFL16 Arabidopsis thaliana... 38 4.2
gb|AF174429.1|AF174429 Arabidopsis thaliana FH protein inte... 38 4.2
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 38 4.2
gb|BT004154.1| Arabidopsis thaliana clone RAFL15-45-A08 (R5... 38 4.2
gb|BT004640.1| Arabidopsis thaliana At1g55740 gene, complet... 38 4.2
gb|BT005468.1| Arabidopsis thaliana clone U50061 unknown pr... 38 4.2
gb|AC004809.1|F13M7 Arabidopsis thaliana chromosome 1 BAC F... 38 4.2
gb|AC002328.2|AC002328 Genomic sequence for Arabidopsis tha... 38 4.2
emb|BX833139.1|CNS09Z21 Arabidopsis thaliana Full-length cD... 38 4.2
emb|BX815114.1|CNS0ACRG Arabidopsis thaliana Full-length cD... 38 4.2
emb|BX815973.1|CNS0AD0Z Arabidopsis thaliana Full-length cD... 38 4.2
emb|BX816891.1|CNS0AD0M Arabidopsis thaliana Full-length cD... 38 4.2
dbj|AB017059.1| Arabidopsis thaliana genomic DNA, chromosom... 38 4.2
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 38 4.2
ref|NM_104450.2| Arabidopsis thaliana hydrolase, hydrolyzin... 38 4.2
ref|NM_180862.1| Arabidopsis thaliana FIP2; protein binding... 38 4.2
ref|NM_124882.2| Arabidopsis thaliana FIP2; protein binding... 38 4.2
ref|NM_100361.3| Arabidopsis thaliana unknown protein AT1G0... 38 4.2
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 38 4.2
>gb|AV553003.1|AV553003 AV553003 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ51d02R 5', mRNA sequence
Length = 542
Score = 285 bits (144), Expect = 1e-074
Identities = 348/416 (83%)
Strand = Plus / Minus
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||| ||||| || ||||| ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 472 tggaccaccttagcgagctcgagcatcgtgaattcaccagggttaccgaggttgaatggg 413
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| ||||| || ||||||||||| |||||| ||| |||||||||||||||||| |||||
Sbjct: 412 ccgacatgttctccttccatcagtctcatcaaaccttcaaccagatcagaaacaaattgg 353
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
|||||||| || ||||| |||||||| ||||| ||||| ||||| ||||| ||||||||
Sbjct: 352 aaactccttgtctgcttcccatcaccgtaaacagtcaatggctctttccttagtgcctgt 293
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattg 778
||||| |||||||| |||||||| ||||| || || ||||| | || ||||| || |||
Sbjct: 292 gcaacgaagttactaacaacacgcccatcatctatacacattcttggaccataggtgttg 233
Query: 779 aagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtt 838
||||| | || || || ||||||| |||||||| ||||| || ||||||||||||||
Sbjct: 232 aagatcctagcaattctgacctcaacattggcacctcggtgatagtccatggtcaacgtc 173
Query: 839 tcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccc 898
|| || ||||| || || |||||||| || || | ||||| |||||||| || ||||||
Sbjct: 172 tctgccgtacgttttccttcatcgtagcaactacgaacaccaatgggattaacgttgccc 113
Query: 899 cagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtact 954
||||||||||| ||||| || ||||| |||||||||||||| ||||||||||||||
Sbjct: 112 cagtaagtctcaacctgaggatgctgcagaggatcaccataaacctcactggtact 57
>gb|AY050389.1| Arabidopsis thaliana AT3g62830/F26K9_260 mRNA, complete cds
Length = 1701
Score = 285 bits (144), Expect = 1e-074
Identities = 348/416 (83%)
Strand = Plus / Minus
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||| ||||| || ||||| ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 1259 tggaccaccttagcgagctcgagcatcgtgaattcaccagggttaccgaggttgaatggg 1200
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| ||||| || ||||||||||| |||||| ||| |||||||||||||||||| |||||
Sbjct: 1199 ccgacatgttctccttccatcagtctcatcaaaccttcaaccagatcagaaacaaattgg 1140
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
|||||||| || ||||| |||||||| ||||| ||||| ||||| ||||| ||||||||
Sbjct: 1139 aaactccttgtctgcttcccatcaccgtaaacagtcaatggctctttccttagtgcctgt 1080
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattg 778
||||| |||||||| |||||||| ||||| || || ||||| | || ||||| || |||
Sbjct: 1079 gcaacgaagttactaacaacacgcccatcatctatacacattcttggaccataggtgttg 1020
Query: 779 aagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtt 838
||||| | || || || ||||||| |||||||| ||||| || ||||||||||||||
Sbjct: 1019 aagatcctagcaattctgacctcaacattggcacctcggtgatagtccatggtcaacgtc 960
Query: 839 tcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccc 898
|| || ||||| || || |||||||| || || | ||||| |||||||| || ||||||
Sbjct: 959 tctgccgtacgttttccttcatcgtagcaactacgaacaccaatgggattaacgttgccc 900
Query: 899 cagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtact 954
||||||||||| ||||| || ||||| |||||||||||||| ||||||||||||||
Sbjct: 899 cagtaagtctcaacctgaggatgctgcagaggatcaccataaacctcactggtact 844
>gb|AY143897.1| Arabidopsis thaliana At3g62830/F26K9_260 mRNA, complete cds
Length = 1338
Score = 285 bits (144), Expect = 1e-074
Identities = 348/416 (83%)
Strand = Plus / Minus
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||| ||||| || ||||| ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 1106 tggaccaccttagcgagctcgagcatcgtgaattcaccagggttaccgaggttgaatggg 1047
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| ||||| || ||||||||||| |||||| ||| |||||||||||||||||| |||||
Sbjct: 1046 ccgacatgttctccttccatcagtctcatcaaaccttcaaccagatcagaaacaaattgg 987
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
|||||||| || ||||| |||||||| ||||| ||||| ||||| ||||| ||||||||
Sbjct: 986 aaactccttgtctgcttcccatcaccgtaaacagtcaatggctctttccttagtgcctgt 927
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattg 778
||||| |||||||| |||||||| ||||| || || ||||| | || ||||| || |||
Sbjct: 926 gcaacgaagttactaacaacacgcccatcatctatacacattcttggaccataggtgttg 867
Query: 779 aagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtt 838
||||| | || || || ||||||| |||||||| ||||| || ||||||||||||||
Sbjct: 866 aagatcctagcaattctgacctcaacattggcacctcggtgatagtccatggtcaacgtc 807
Query: 839 tcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccc 898
|| || ||||| || || |||||||| || || | ||||| |||||||| || ||||||
Sbjct: 806 tctgccgtacgttttccttcatcgtagcaactacgaacaccaatgggattaacgttgccc 747
Query: 899 cagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtact 954
||||||||||| ||||| || ||||| |||||||||||||| ||||||||||||||
Sbjct: 746 cagtaagtctcaacctgaggatgctgcagaggatcaccataaacctcactggtact 691
>emb|BX825822.1|CNS0A4P6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL65ZB07 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 923
Score = 285 bits (144), Expect = 1e-074
Identities = 348/416 (83%)
Strand = Plus / Minus
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||| ||||| || ||||| ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 477 tggaccaccttagcgagctcgagcatcgtgaattcaccagggttaccgaggttgaatggg 418
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| ||||| || ||||||||||| |||||| ||| |||||||||||||||||| |||||
Sbjct: 417 ccgacatgttctccttccatcagtctcatcaaaccttcaaccagatcagaaacaaattgg 358
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
|||||||| || ||||| |||||||| ||||| ||||| ||||| ||||| ||||||||
Sbjct: 357 aaactccttgtctgcttcccatcaccgtaaacagtcaatggctctttccttagtgcctgt 298
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattg 778
||||| |||||||| |||||||| ||||| || || ||||| | || ||||| || |||
Sbjct: 297 gcaacgaagttactaacaacacgcccatcatctatacacattcttggaccataggtgttg 238
Query: 779 aagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtt 838
||||| | || || || ||||||| |||||||| ||||| || ||||||||||||||
Sbjct: 237 aagatcctagcaattctgacctcaacattggcacctcggtgatagtccatggtcaacgtc 178
Query: 839 tcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccc 898
|| || ||||| || || |||||||| || || | ||||| |||||||| || ||||||
Sbjct: 177 tctgccgtacgttttccttcatcgtagcaactacgaacaccaatgggattaacgttgccc 118
Query: 899 cagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtact 954
||||||||||| ||||| || ||||| |||||||||||||| ||||||||||||||
Sbjct: 117 cagtaagtctcaacctgaggatgctgcagaggatcaccataaacctcactggtact 62
>ref|NM_116148.1| Arabidopsis thaliana UXS2 (UDP-GLUCURONIC ACID DECARBOXYLASE 2);
catalytic/ dTDP-glucose 4,6-dehydratase AT3G62830 (UXS2)
mRNA, complete cds
Length = 1338
Score = 285 bits (144), Expect = 1e-074
Identities = 348/416 (83%)
Strand = Plus / Minus
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||| ||||| || ||||| ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 1106 tggaccaccttagcgagctcgagcatcgtgaattcaccagggttaccgaggttgaatggg 1047
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| ||||| || ||||||||||| |||||| ||| |||||||||||||||||| |||||
Sbjct: 1046 ccgacatgttctccttccatcagtctcatcaaaccttcaaccagatcagaaacaaattgg 987
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
|||||||| || ||||| |||||||| ||||| ||||| ||||| ||||| ||||||||
Sbjct: 986 aaactccttgtctgcttcccatcaccgtaaacagtcaatggctctttccttagtgcctgt 927
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattg 778
||||| |||||||| |||||||| ||||| || || ||||| | || ||||| || |||
Sbjct: 926 gcaacgaagttactaacaacacgcccatcatctatacacattcttggaccataggtgttg 867
Query: 779 aagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtt 838
||||| | || || || ||||||| |||||||| ||||| || ||||||||||||||
Sbjct: 866 aagatcctagcaattctgacctcaacattggcacctcggtgatagtccatggtcaacgtc 807
Query: 839 tcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccc 898
|| || ||||| || || |||||||| || || | ||||| |||||||| || ||||||
Sbjct: 806 tctgccgtacgttttccttcatcgtagcaactacgaacaccaatgggattaacgttgccc 747
Query: 899 cagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtact 954
||||||||||| ||||| || ||||| |||||||||||||| ||||||||||||||
Sbjct: 746 cagtaagtctcaacctgaggatgctgcagaggatcaccataaacctcactggtact 691
>emb|Z49239.1|ATD18MR A.thaliana mRNA for putative dTDP-glucose 4-6-dehydratases
Length = 1660
Score = 270 bits (136), Expect = 6e-070
Identities = 346/416 (83%)
Strand = Plus / Minus
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||| ||||| || ||||| ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 1245 tggaccaccttagcgagctcgagcatcgtgaattcaccagggttaccgaggttgaatggg 1186
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| ||||| || ||||||||||| |||||| ||| |||||||||||||||||| |||||
Sbjct: 1185 ccgacatgttcaccttccatcagtctcatcaaaccttcaaccagatcagaaacaaattgg 1126
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
|||||||| || ||||| |||||||| ||||| ||||| ||||| ||||| ||||||||
Sbjct: 1125 aaactccttgtctgcttcccatcaccgtaaacagtcaatggctctttccttagtgcctgt 1066
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattg 778
||||| |||||||| |||||||| ||||| || || ||||| | || ||||| || |||
Sbjct: 1065 gcaacgaagttactaacaacacgcccatcatctatacacattcttggaccataggtgttg 1006
Query: 779 aagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtt 838
||||| | || || || ||||||| |||| || ||||| || ||||||||||||||
Sbjct: 1005 aagatcctagcaattctgacctcaacattggaccctcggtgatagtccatggtcaacgtc 946
Query: 839 tcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccc 898
|| || ||||| || || |||||||| || || | ||||| |||||||| || ||||||
Sbjct: 945 tctgccgtacgttttccttcatcgtagcaactacgaacaccaatgggattaacgttgccc 886
Query: 899 cagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtact 954
||||||||||| ||||| || ||||| |||||||||||||| ||||||||||||||
Sbjct: 885 cagtaagtctcaacctgaggatgctgcagaggatcaccataaacctcactggtact 830
>gb|AF361617.1| Arabidopsis thaliana AT3g62830/F26K9_260 mRNA, complete cds
Length = 1663
Score = 270 bits (136), Expect = 6e-070
Identities = 346/416 (83%)
Strand = Plus / Minus
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||| ||||| || ||||| ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 1259 tggaccaccttagcgagctcgagcatcgtgaattcaccagggttaccgaggttgaatggg 1200
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| ||||| || ||||||||||| |||||| ||| |||||||||||||||||| |||||
Sbjct: 1199 ccgacatgttcaccttccatcagtctcatcaaaccttcaaccagatcagaaacaaattgg 1140
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
|||||||| || ||||| |||||||| ||||| ||||| ||||| ||||| ||||||||
Sbjct: 1139 aaactccttgtctgcttcccatcaccgtaaacagtcaatggctctttccttagtgcctgt 1080
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattg 778
||||| |||||||| |||||||| ||||| || || ||||| | || ||||| || |||
Sbjct: 1079 gcaacgaagttactaacaacacgcccatcatctatacacattcttggaccataggtgttg 1020
Query: 779 aagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtt 838
||||| | || || || ||||||| |||| || ||||| || ||||||||||||||
Sbjct: 1019 aagatcctagcaattctgacctcaacattggaccctcggtgatagtccatggtcaacgtc 960
Query: 839 tcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccc 898
|| || ||||| || || |||||||| || || | ||||| |||||||| || ||||||
Sbjct: 959 tctgccgtacgttttccttcatcgtagcaactacgaacaccaatgggattaacgttgccc 900
Query: 899 cagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtact 954
||||||||||| ||||| || ||||| |||||||||||||| ||||||||||||||
Sbjct: 899 cagtaagtctcaacctgaggatgctgcagaggatcaccataaacctcactggtact 844
>gb|AF387788.1| Arabidopsis thaliana UDP-glucuronic acid decarboxylase (UXS2) mRNA,
complete cds
Length = 1338
Score = 270 bits (136), Expect = 6e-070
Identities = 346/416 (83%)
Strand = Plus / Minus
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||| ||||| || ||||| ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 1106 tggaccaccttagcgagctcgagcatcgtgaattcaccagggttaccgaggttgaatggg 1047
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| ||||| || ||||||||||| |||||| ||| |||||||||||||||||| |||||
Sbjct: 1046 ccgacatgttcaccttccatcagtctcatcaaaccttcaaccagatcagaaacaaattgg 987
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
|||||||| || ||||| |||||||| ||||| ||||| ||||| ||||| ||||||||
Sbjct: 986 aaactccttgtctgcttcccatcaccgtaaacagtcaatggctctttccttagtgcctgt 927
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattg 778
||||| |||||||| |||||||| ||||| || || ||||| | || ||||| || |||
Sbjct: 926 gcaacgaagttactaacaacacgcccatcatctatacacattcttggaccataggtgttg 867
Query: 779 aagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtt 838
||||| | || || || ||||||| |||| || ||||| || ||||||||||||||
Sbjct: 866 aagatcctagcaattctgacctcaacattggaccctcggtgatagtccatggtcaacgtc 807
Query: 839 tcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccc 898
|| || ||||| || || |||||||| || || | ||||| |||||||| || ||||||
Sbjct: 806 tctgccgtacgttttccttcatcgtagcaactacgaacaccaatgggattaacgttgccc 747
Query: 899 cagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtact 954
||||||||||| ||||| || ||||| |||||||||||||| ||||||||||||||
Sbjct: 746 cagtaagtctcaacctgaggatgctgcagaggatcaccataaacctcactggtact 691
>gb|AV550208.1|AV550208 AV550208 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ109f12R 5', mRNA sequence
Length = 449
Score = 264 bits (133), Expect = 4e-068
Identities = 325/389 (83%)
Strand = Plus / Minus
Query: 566 gtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatcagcttc 625
||||| || ||||||||||| ||||||||||| || ||||| || ||||||||| | ||
Sbjct: 445 gtgaattcaccagggttaccgaggttgaatgggccgacatgttctccttccatccgtctc 386
Query: 626 atcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttccatcacca 685
|||| ||| |||||||||||||||||| ||||||||||||| || ||||| ||||||||
Sbjct: 385 atcaaaccttcaaccagatcagaaacaaattggaaactccttgtctgcttcccatcaccg 326
Query: 686 taaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactgacaacacggcca 745
||||| ||||| ||||| ||||| |||||||| ||||| |||||||| |||||||| |||
Sbjct: 325 taaacagtcaatggctctttccttagtgcctgtgcaacgaagttactaacaacacgccca 266
Query: 746 tcgtcaatgcacatgcgagggccatatgtattgaagatacgtgcgatcctaacctcaagg 805
|| || || ||||| | || ||||| || |||||||| | || || || |||||||
Sbjct: 265 tcatctatacacattcttggaccataggtgttgaagatcctagcaattctgacctcaaca 206
Query: 806 ttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgtaa 865
|||||||| ||||| || |||||||||||||| || || ||||| || || ||||||||
Sbjct: 205 ttggcacctcggtgatagtccatggtcaacgtctctgccgtacgttttccttcatcgtag 146
Query: 866 cagctcctgacaccgatgggattgacattgccccagtaagtctccacctgcgggtgctgg 925
|| || | ||||| |||||||| || ||||||||||||||||| ||||| || |||||
Sbjct: 145 caactacgaacaccaatgggattaacgttgccccagtaagtctcaacctgaggatgctgc 86
Query: 926 agaggatcaccatagacctcactggtact 954
|||||||||||||| ||||||||||||||
Sbjct: 85 agaggatcaccataaacctcactggtact 57
>emb|AX505495.1| Sequence 190 from Patent WO0216655
Length = 1332
Score = 218 bits (110), Expect = 2e-054
Identities = 335/410 (81%)
Strand = Plus / Minus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
||||| || ||||| ||||||||||| || || |||||||| ||||| ||||| || |||
Sbjct: 1106 accttagcgagctcgagcatggtgaattcaccggggttaccaaggttaaatggaccgaca 1047
Query: 605 tgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactc 664
|| || || ||||||| | |||||||||| || ||||||||||| ||| | |||||||||
Sbjct: 1046 tgttctccctccatcaacctcatcagaccttccaccagatcagagacaaactggaaactc 987
Query: 665 ctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaaca 724
|| || ||||| |||||||||||||| ||||| ||||| || || | |||||| |||||
Sbjct: 986 ctagtctgcttaccatcaccataaacagtcaaaggctcttttcttaatgcctgggcaacg 927
Query: 725 aagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagata 784
||||| || || ||||| || || || || ||||| | |||||||| || ||||| ||
Sbjct: 926 aagttgctaaccacacgaccgtcatcgatacacatccttgggccataagtgttgaatatc 867
Query: 785 cgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagct 844
| || ||||||||||||| || || || | ||| || ||||||||||| || |||||
Sbjct: 866 ctagcaatcctaacctcaacattagcgcctctgtgatagtccatggtcaaagtctcagcc 807
Query: 845 gtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaa 904
||||| ||||| || |||||||| |||| |||||||||||||| || ||||||||||||
Sbjct: 806 gtacgtttgccttcgtcgtaacaactccgaacaccgatgggattaacgttgccccagtaa 747
Query: 905 gtctccacctgcgggtgctggagaggatcaccatagacctcactggtact 954
||||| ||||| || || || |||||||| |||||||||||||| |||||
Sbjct: 746 gtctcaacctgaggatgttgaagaggatctccatagacctcactcgtact 697
>gb|BT022016.1| Arabidopsis thaliana At2g47650 gene, complete cds
Length = 1480
Score = 218 bits (110), Expect = 2e-054
Identities = 335/410 (81%)
Strand = Plus / Minus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
||||| || ||||| ||||||||||| || || |||||||| ||||| ||||| || |||
Sbjct: 1118 accttagcgagctcgagcatggtgaattcaccggggttaccaaggttaaatggaccgaca 1059
Query: 605 tgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactc 664
|| || || ||||||| | |||||||||| || ||||||||||| ||| | |||||||||
Sbjct: 1058 tgttctccctccatcaacctcatcagaccttccaccagatcagagacaaactggaaactc 999
Query: 665 ctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaaca 724
|| || ||||| |||||||||||||| ||||| ||||| || || | |||||| |||||
Sbjct: 998 ctagtctgcttaccatcaccataaacagtcaaaggctcttttcttaatgcctgggcaacg 939
Query: 725 aagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagata 784
||||| || || ||||| || || || || ||||| | |||||||| || ||||| ||
Sbjct: 938 aagttgctaaccacacgaccgtcatcgatacacatccttgggccataagtgttgaatatc 879
Query: 785 cgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagct 844
| || ||||||||||||| || || || | ||| || ||||||||||| || |||||
Sbjct: 878 ctagcaatcctaacctcaacattagcgcctctgtgatagtccatggtcaaagtctcagcc 819
Query: 845 gtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaa 904
||||| ||||| || |||||||| |||| |||||||||||||| || ||||||||||||
Sbjct: 818 gtacgtttgccttcgtcgtaacaactccgaacaccgatgggattaacgttgccccagtaa 759
Query: 905 gtctccacctgcgggtgctggagaggatcaccatagacctcactggtact 954
||||| ||||| || || || |||||||| |||||||||||||| |||||
Sbjct: 758 gtctcaacctgaggatgttgaagaggatctccatagacctcactcgtact 709
>ref|NM_130333.1| Arabidopsis thaliana UXS4 (UDP-XYLOSE SYNTHASE 4); catalytic
AT2G47650 (UXS4) mRNA, complete cds
Length = 1529
Score = 218 bits (110), Expect = 2e-054
Identities = 335/410 (81%)
Strand = Plus / Minus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
||||| || ||||| ||||||||||| || || |||||||| ||||| ||||| || |||
Sbjct: 1199 accttagcgagctcgagcatggtgaattcaccggggttaccaaggttaaatggaccgaca 1140
Query: 605 tgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactc 664
|| || || ||||||| | |||||||||| || ||||||||||| ||| | |||||||||
Sbjct: 1139 tgttctccctccatcaacctcatcagaccttccaccagatcagagacaaactggaaactc 1080
Query: 665 ctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaaca 724
|| || ||||| |||||||||||||| ||||| ||||| || || | |||||| |||||
Sbjct: 1079 ctagtctgcttaccatcaccataaacagtcaaaggctcttttcttaatgcctgggcaacg 1020
Query: 725 aagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagata 784
||||| || || ||||| || || || || ||||| | |||||||| || ||||| ||
Sbjct: 1019 aagttgctaaccacacgaccgtcatcgatacacatccttgggccataagtgttgaatatc 960
Query: 785 cgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagct 844
| || ||||||||||||| || || || | ||| || ||||||||||| || |||||
Sbjct: 959 ctagcaatcctaacctcaacattagcgcctctgtgatagtccatggtcaaagtctcagcc 900
Query: 845 gtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaa 904
||||| ||||| || |||||||| |||| |||||||||||||| || ||||||||||||
Sbjct: 899 gtacgtttgccttcgtcgtaacaactccgaacaccgatgggattaacgttgccccagtaa 840
Query: 905 gtctccacctgcgggtgctggagaggatcaccatagacctcactggtact 954
||||| ||||| || || || |||||||| |||||||||||||| |||||
Sbjct: 839 gtctcaacctgaggatgttgaagaggatctccatagacctcactcgtact 790
>gb|CB185735.2|CB185735 EST00661 Arabidopsis avirulent Pseudomonas syringae subtracted
library Arabidopsis thaliana cDNA clone RPM5-E9 similar
to dTDP-glucose 4-6-dehydratase homolog, mRNA sequence
Length = 672
Score = 196 bits (99), Expect = 8e-048
Identities = 249/299 (83%)
Strand = Plus / Minus
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||| ||||| || ||||| ||||| |||| || ||||||||||| |||||||||||
Sbjct: 301 tggaccaccttagcgagctcgagcatcatgaattcaccagggttaccgaggttgaatggg 242
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| ||||| || ||||||||||| |||||| ||| |||||||||||||||||| |||||
Sbjct: 241 ccgacatgttctccttccatcagtctcatcaaaccttcaaccagatcagaaacaaattgg 182
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
|||||||| || ||||| |||||||| ||||| ||||| ||||| ||||| ||||||||
Sbjct: 181 aaactccttgtctgcttcccatcaccgtaaacagtcaatggctctttccttagtgcctgt 122
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattg 778
||||| |||||||| |||||||| ||||| || || ||||| | || ||||| || |||
Sbjct: 121 gcaacgaagttactaacaacacgcccatcatctatacacattcttggaccataggtgttg 62
Query: 779 aagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgt 837
||||| | || || || ||||||| |||||||| ||||| || ||||||||||||||
Sbjct: 61 aagatcctagcaattctgacctcaacattggcacctcggtgatagtccatggtcaacgt 3
>gb|AV541133.1|AV541133 AV541133 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ16f09F 3', mRNA sequence
Length = 594
Score = 176 bits (89), Expect = 7e-042
Identities = 179/209 (85%)
Strand = Plus / Plus
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||| ||||| || ||||| ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 374 tggaccaccttagcgagctcgagcatcgtgaattcaccagggttaccgaggttgaatggg 433
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| ||||| || ||||||||||| |||||| ||| |||||||||||||||||| |||||
Sbjct: 434 ccgacatgttctccttccatcagtctcatcaaaccttcaaccagatcagaaacaaattgg 493
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
|||||||| || ||||| ||||||| ||||| ||||| ||||| ||||| ||||||||
Sbjct: 494 aaactccttgtctgcttctcatcaccgtaaacagtcaatggctctttccttagtgcctgt 553
Query: 719 gcaacaaagttactgacaacacggccatc 747
||||| |||||||| |||||||| |||||
Sbjct: 554 gcaacgaagttactaacaacacgcccatc 582
>gb|N37324.1|N37324 18551 Lambda-PRL2 Arabidopsis thaliana cDNA clone 209L6T7, mRNA
sequence
Length = 541
Score = 163 bits (82), Expect = 1e-037
Identities = 268/331 (80%)
Strand = Plus / Minus
Query: 624 tcatcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttccatcac 683
|||||||||| || ||||||||||| ||| | ||||||||||| || ||||| |||||||
Sbjct: 341 tcatcagaccttccaccagatcagagacaaactggaaactcctagtctgcttaccatcac 282
Query: 684 cataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactgacaacacggc 743
||||||| ||||| ||||| || || | |||||| | ||| ||||| || || ||||| |
Sbjct: 281 cataaacagtcaaaggctcttttcttaatgcctgggnaacgaagttgctaaccacacgac 222
Query: 744 catcgtcaatgcacatgcgagggccatatgtattgaagatacgtgcgatcctaacctcaa 803
| || || || ||||| | |||||||| || ||||| || | || |||||||||||||
Sbjct: 221 cgtcatcgatacacatccttgggccataagtgttgaatatcctagcaatcctaacctcaa 162
Query: 804 ggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgt 863
|| || || | ||| || |||||||| || || ||||| ||||| ||||| || ||||
Sbjct: 161 cattagcgcctctgtgatagtccatggtnaaagtctcagccgtacgtttgccttcgtcgt 102
Query: 864 aacagctcctgacaccgatgggattgacattgccccagtaagtctccacctgcgggtgct 923
|||| |||| |||||||||||||| || ||||||||||||||||| ||||| || || |
Sbjct: 101 aacaactccgaacaccgatgggattaacgttgccccagtaagtctcaacctgaggatgtt 42
Query: 924 ggagaggatcaccatagacctcactggtact 954
| |||||||| |||||||||| ||| |||||
Sbjct: 41 gaagaggatctccatagacctnactcgtact 11
>gb|AV782529.1|AV782529 AV782529 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-18-J05 3',
mRNA sequence
Length = 689
Score = 141 bits (71), Expect = 4e-031
Identities = 260/323 (80%)
Strand = Plus / Plus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
||||| || ||||| ||||||||||| || || |||||||| ||||| ||||| || |||
Sbjct: 364 accttagcgagctcgagcatggtgaattcaccggggttaccaaggttaaatggaccgaca 423
Query: 605 tgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactc 664
|| || || ||||||| | |||||||||| || ||||||||||| ||| | |||||||||
Sbjct: 424 tgttctccctccatcaacctcatcagaccttccaccagatcagagacaaactggaaactc 483
Query: 665 ctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaaca 724
|| || ||||| |||||||||||||| ||||| ||||| || || | |||||| |||||
Sbjct: 484 ctagtctgcttaccatcaccataaacagtcaaaggctcttttcttaatgcctgggcaacg 543
Query: 725 aagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagata 784
||||| || || ||||| || || || || ||||| | |||||||| || ||||| ||
Sbjct: 544 aagttgctaaccacacgaccgtcatcgatacacatccttgggccataagtgttgaatatc 603
Query: 785 cgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagct 844
| || ||||||||||||| || || || | ||| || ||||||||||| || |||||
Sbjct: 604 ctagcaatcctaacctcaacattagcgcctctgtgatagtccatggtcaaagtctcagcc 663
Query: 845 gtacgcttgccctcatcgtaaca 867
||||| ||||| || ||||||||
Sbjct: 664 gtacgtttgccttcgtcgtaaca 686
>gb|AV521021.1|AV521021 AV521021 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ41d10F 3', mRNA
sequence
Length = 635
Score = 141 bits (71), Expect = 4e-031
Identities = 260/323 (80%)
Strand = Plus / Plus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
||||| || ||||| ||||||||||| || || |||||||| ||||| ||||| || |||
Sbjct: 310 accttagcgagctcgagcatggtgaattcaccggggttaccaaggttaaatggaccgaca 369
Query: 605 tgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactc 664
|| || || ||||||| | |||||||||| || ||||||||||| ||| | |||||||||
Sbjct: 370 tgttctccctccatcaacctcatcagaccttccaccagatcagagacaaactggaaactc 429
Query: 665 ctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaaca 724
|| || ||||| |||||||||||||| ||||| ||||| || || | |||||| |||||
Sbjct: 430 ctagtctgcttaccatcaccataaacagtcaaaggctcttttcttaatgcctgggcaacg 489
Query: 725 aagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagata 784
||||| || || ||||| || || || || ||||| | |||||||| || ||||| ||
Sbjct: 490 aagttgctaaccacacgaccgtcatcgatacacatccttgggccataagtgttgaatatc 549
Query: 785 cgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagct 844
| || ||||||||||||| || || || | ||| || ||||||||||| || |||||
Sbjct: 550 ctagcaatcctaacctcaacattagcgcctctgtgatagtccatggtcaaagtctcagcc 609
Query: 845 gtacgcttgccctcatcgtaaca 867
||||| ||||| || ||||||||
Sbjct: 610 gtacgtttgccttcgtcgtaaca 632
>gb|AV537418.1|AV537418 AV537418 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ05f08F 3', mRNA sequence
Length = 636
Score = 141 bits (71), Expect = 4e-031
Identities = 260/323 (80%)
Strand = Plus / Plus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
||||| || ||||| ||||||||||| || || |||||||| ||||| ||||| || |||
Sbjct: 311 accttagcgagctcgagcatggtgaattcaccggggttaccaaggttaaatggaccgaca 370
Query: 605 tgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactc 664
|| || || ||||||| | |||||||||| || ||||||||||| ||| | |||||||||
Sbjct: 371 tgttctccctccatcaacctcatcagaccttccaccagatcagagacaaactggaaactc 430
Query: 665 ctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaaca 724
|| || ||||| |||||||||||||| ||||| ||||| || || | |||||| |||||
Sbjct: 431 ctagtctgcttaccatcaccataaacagtcaaaggctcttttcttaatgcctgggcaacg 490
Query: 725 aagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagata 784
||||| || || ||||| || || || || ||||| | |||||||| || ||||| ||
Sbjct: 491 aagttgctaaccacacgaccgtcatcgatacacatccttgggccataagtgttgaatatc 550
Query: 785 cgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagct 844
| || ||||||||||||| || || || | ||| || ||||||||||| || |||||
Sbjct: 551 ctagcaatcctaacctcaacattagcgcctctgtgatagtccatggtcaaagtctcagcc 610
Query: 845 gtacgcttgccctcatcgtaaca 867
||||| ||||| || ||||||||
Sbjct: 611 gtacgtttgccttcgtcgtaaca 633
>gb|AV538824.1|AV538824 AV538824 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ121h03F 3', mRNA sequence
Length = 596
Score = 139 bits (70), Expect = 2e-030
Identities = 136/158 (86%)
Strand = Plus / Plus
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||| ||||| || ||||| ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 439 tggaccaccttagcgagctcgagcatcgtgaattcaccagggttaccgaggttgaatggg 498
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| ||||| || ||||||||||| |||||| ||| |||||||||||||||||| |||||
Sbjct: 499 ccgacatgttctccttccatcagtctcatcaaaccttcaaccagatcagaaacaaattgg 558
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaa 696
|||||||| || ||||| |||||||| ||||| |||||
Sbjct: 559 aaactccttgtctgcttcccatcaccgtaaacagtcaa 596
>gb|AV541838.1|AV541838 AV541838 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ172b02F 3', mRNA sequence
Length = 570
Score = 131 bits (66), Expect = 4e-028
Identities = 126/146 (86%)
Strand = Plus / Plus
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||| ||||| || ||||| ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 425 tggaccaccttagcgagctcgagcatcgtgaattcaccagggttaccgaggttgaatggg 484
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| ||||| || ||||||||||| |||||| ||| |||||||||||||||||| |||||
Sbjct: 485 ccgacatgttctccttccatcagtctcatcaaaccttcaaccagatcagaaacaaattgg 544
Query: 659 aaactcctggtttgctttccatcacc 684
|||||||| || ||||| ||||||||
Sbjct: 545 aaactccttgtctgcttcccatcacc 570
>gb|AV533768.1|AV533768 AV533768 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB067e08F 3', mRNA sequence
Length = 549
Score = 117 bits (59), Expect = 6e-024
Identities = 149/179 (83%)
Strand = Plus / Plus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
||||| || ||||| ||||||||||| || || |||||||| ||||| ||||| || |||
Sbjct: 367 accttagcgagctcgagcatggtgaattcaccggggttaccaaggttaaatggaccgaca 426
Query: 605 tgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactc 664
|| || || ||||||| | |||||||||| || ||||||||||| ||| | |||||||||
Sbjct: 427 tgttctccctccatcaacctcatcagaccttccaccagatcagagacaaactggaaactc 486
Query: 665 ctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaac 723
|| || ||||| |||||||||||||| ||||| ||||| || || | |||||| |||||
Sbjct: 487 ctagtctgcttaccatcaccataaacagtcaaaggctcttttcttaatgcctgggcaac 545
>gb|R90332.1|R90332 16687 Lambda-PRL2 Arabidopsis thaliana cDNA clone 192K23T7, mRNA
sequence
Length = 442
Score = 115 bits (58), Expect = 2e-023
Identities = 132/158 (83%)
Strand = Plus / Minus
Query: 797 acctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccc 856
||||||| |||||||| ||||| || |||||||||||||| || || ||||| || ||
Sbjct: 225 acctcaanattggcaccncggtgatagtccatggtcaacgtctctgccgtacgttttcct 166
Query: 857 tcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctccacctgc 916
|||||||| | || | ||||| |||||||| || ||||||||||||||||| |||||
Sbjct: 165 tcatcgtagnaactacgaacaccaatgggattaacgttgccccagtaagtctcaacctga 106
Query: 917 gggtgctggagaggatcaccatagacctcactggtact 954
|| ||||| |||||||||||||| |||| |||||||||
Sbjct: 105 ggatgctgcagaggatcaccataaacctnactggtact 68
>gb|AV551147.1|AV551147 AV551147 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ121h03R 5', mRNA sequence
Length = 344
Score = 95.6 bits (48), Expect = 2e-017
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 875 acaccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatca 934
||||| |||||||| || ||||||||||||||||| ||||| || ||||| |||||||||
Sbjct: 318 acaccaatgggattaacgttgccccagtaagtctcaacctgaggatgctgcagaggatca 259
Query: 935 ccatagacctcactggtact 954
||||| ||||||||||||||
Sbjct: 258 ccataaacctcactggtact 239
>gb|CB260122.1|CB260122 94-E9601-013-003-K24-t7r MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770K243Q 5-PRIME, mRNA sequence
Length = 499
Score = 93.7 bits (47), Expect = 8e-017
Identities = 116/139 (83%)
Strand = Plus / Minus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
||||| || ||||| ||||||||||| || || |||||||| ||||| ||||| || |||
Sbjct: 139 accttagcgagctcgagcatggtgaattcaccggggttaccaaggttaaatggaccgaca 80
Query: 605 tgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactc 664
|| || || ||||||| | |||||||||| || ||||||||||| ||| | |||||||||
Sbjct: 79 tgttctccctccatcaacctcatcagaccttccaccagatcagagacaaactggaaactc 20
Query: 665 ctggtttgctttccatcac 683
|| || ||||| |||||||
Sbjct: 19 ctagtctgcttaccatcac 1
>gb|AV549274.1|AV549274 AV549274 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ05f08R 5', mRNA sequence
Length = 281
Score = 93.7 bits (47), Expect = 8e-017
Identities = 188/235 (80%)
Strand = Plus / Minus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
||||||||||| ||| | ||||||||||| || ||||| |||||||||||||| |||||
Sbjct: 279 accagatcagagacaaactggaaactcctagtctgcttaccatcaccataaacagtcaaa 220
Query: 698 ggctccttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcac 757
||||| || || | |||||| ||||| ||||| || || ||||| || || || || |||
Sbjct: 219 ggctcttttcttaatgcctgggcaacgaagttgctaaccacacgaccgtcatcgatacac 160
Query: 758 atgcgagggccatatgtattgaagatacgtgcgatcctaacctcaaggttggcaccacgg 817
|| | |||||||| || ||||| || | || ||||||||||||| || || || | |
Sbjct: 159 atccttgggccataagtgttgaatatcctagcaatcctaacctcaacattagcgcctctg 100
Query: 818 tggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcc 872
|| || ||||||||||| || ||||| ||||| ||||| || |||||||| ||||
Sbjct: 99 tgatagtccatggtcaaagtctcagccgtacgtttgccttcgtcgtaacaactcc 45
>gb|AY065075.1| Arabidopsis thaliana dTDP-glucose 4-6-dehydratase-like protein
(F4P12.220) mRNA, complete cds
Length = 1666
Score = 93.7 bits (47), Expect = 8e-017
Identities = 329/421 (78%), Gaps = 4/421 (0%)
Strand = Plus / Minus
Query: 551 gcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccacatgctcg 610
||||| |||||||| ||||| || ||||||||||| |||||||| || || ||||| |||
Sbjct: 1204 gcaagttcaagcattgtgaattctccagggttaccaaggttgaagggtcctacatgatcg 1145
Query: 611 ccttccat--cagcttcatcagaccctcaaccagatcagaaacatattggaaactcctgg 668
|||||| |||| || || ||||| |||| |||||||||||||| || || | |
Sbjct: 1144 ttttccattaaagctaca--agtccctccaccaagtcagaaacatattgaaagctacgag 1087
Query: 669 tttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagt 728
| || ||||||||||||||||| |||| || | || | | | ||| ||||||||||
Sbjct: 1086 tctgttttccatcaccataaacagtcattgggtgtttgcgaatggtctgggcaacaaagt 1027
Query: 729 tactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagatacgtg 788
|||| |||||||| ||||| |||| |||||| | || |||||||| ||||| ||||| |
Sbjct: 1026 tactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaatacgag 967
Query: 789 cgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtac 848
| || |||||||| | ||||| ||||| |||||||||| || ||||| || ||||
Sbjct: 966 caattctaacctccacacctgcacctcggtgataatccatggccagggtttctgcagtac 907
Query: 849 gcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtct 908
|||| || ||||| || || ||||| ||||||| ||||| || || |||||||||||||
Sbjct: 906 gctttccttcatcatagcaactcctctcaccgattggattcacgtttccccagtaagtct 847
Query: 909 ccacctgcgggtgctggagaggatcaccatagacctcactggtactggtgaggaggaacc 968
| ||| || |||| || ||||| |||||||| ||||| || |||||||| || ||||
Sbjct: 846 ctttctgtggatgctcaaggggatctccatagacttcacttgtgctggtgagcagaaacc 787
Query: 969 t 969
|
Sbjct: 786 t 786
>gb|AF387787.1| Arabidopsis thaliana UDP-glucuronic acid decarboxylase (UXS1) mRNA,
complete cds
Length = 1302
Score = 93.7 bits (47), Expect = 8e-017
Identities = 200/251 (79%)
Strand = Plus / Minus
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattg 778
|||||||||||||| |||||||| ||||| |||| |||||| | || |||||||| |||
Sbjct: 929 gcaacaaagttactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttg 870
Query: 779 aagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtt 838
|| ||||| || || |||||||| | ||||| ||||| |||||||||| || |||
Sbjct: 869 aaaatacgagcaattctaacctccacacctgcacctcggtgataatccatggccagggtt 810
Query: 839 tcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccc 898
|| || |||||||| || ||||| || || ||||| ||||||| ||||| || || |||
Sbjct: 809 tctgcagtacgctttccttcatcatagcaactcctctcaccgattggattcacgtttccc 750
Query: 899 cagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtactggtg 958
||||||||||| ||| || |||| || ||||| |||||||| ||||| || ||||||
Sbjct: 749 cagtaagtctctttctgtggatgctcaaggggatctccatagacttcacttgtgctggtg 690
Query: 959 aggaggaacct 969
|| || |||||
Sbjct: 689 agcagaaacct 679
Score = 48.1 bits (24), Expect = 0.004
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 551 gcaagctcaagcatggtgaactcgccagggttacccaggttgaa 594
||||| |||||||| ||||| || ||||||||||| ||||||||
Sbjct: 1091 gcaagttcaagcattgtgaattctccagggttaccaaggttgaa 1048
>gb|BT003355.1| Arabidopsis thaliana dTDP-glucose 4-6-dehydratase-like protein
(At3g53520) mRNA, complete cds
Length = 1492
Score = 93.7 bits (47), Expect = 8e-017
Identities = 329/421 (78%), Gaps = 4/421 (0%)
Strand = Plus / Minus
Query: 551 gcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccacatgctcg 610
||||| |||||||| ||||| || ||||||||||| |||||||| || || ||||| |||
Sbjct: 1097 gcaagttcaagcattgtgaattctccagggttaccaaggttgaagggtcctacatgatcg 1038
Query: 611 ccttccat--cagcttcatcagaccctcaaccagatcagaaacatattggaaactcctgg 668
|||||| |||| || || ||||| |||| |||||||||||||| || || | |
Sbjct: 1037 ttttccattaaagctaca--agtccctccaccaagtcagaaacatattgaaagctacgag 980
Query: 669 tttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagt 728
| || ||||||||||||||||| |||| || | || | | | ||| ||||||||||
Sbjct: 979 tctgttttccatcaccataaacagtcattgggtgtttgcgaatggtctgggcaacaaagt 920
Query: 729 tactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagatacgtg 788
|||| |||||||| ||||| |||| |||||| | || |||||||| ||||| ||||| |
Sbjct: 919 tactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaatacgag 860
Query: 789 cgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtac 848
| || |||||||| | ||||| ||||| |||||||||| || ||||| || ||||
Sbjct: 859 caattctaacctccacacctgcacctcggtgataatccatggccagggtttctgcagtac 800
Query: 849 gcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtct 908
|||| || ||||| || || ||||| ||||||| ||||| || || |||||||||||||
Sbjct: 799 gctttccttcatcatagcaactcctctcaccgattggattcacgtttccccagtaagtct 740
Query: 909 ccacctgcgggtgctggagaggatcaccatagacctcactggtactggtgaggaggaacc 968
| ||| || |||| || ||||| |||||||| ||||| || |||||||| || ||||
Sbjct: 739 ctttctgtggatgctcaaggggatctccatagacttcacttgtgctggtgagcagaaacc 680
Query: 969 t 969
|
Sbjct: 679 t 679
>emb|BX822635.1|CNS0A7MG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB54ZH12 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1604
Score = 93.7 bits (47), Expect = 8e-017
Identities = 329/421 (78%), Gaps = 4/421 (0%)
Strand = Plus / Minus
Query: 551 gcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccacatgctcg 610
||||| |||||||| ||||| || ||||||||||| |||||||| || || ||||| |||
Sbjct: 1191 gcaagttcaagcattgtgaattctccagggttaccaaggttgaagggtcctacatgatcg 1132
Query: 611 ccttccat--cagcttcatcagaccctcaaccagatcagaaacatattggaaactcctgg 668
|||||| |||| || || ||||| |||| |||||||||||||| || || | |
Sbjct: 1131 ttttccattaaagctaca--agtccctccaccaagtcagaaacatattgaaagctacgag 1074
Query: 669 tttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagt 728
| || ||||||||||||||||| |||| || | || | | | ||| ||||||||||
Sbjct: 1073 tctgttttccatcaccataaacagtcattgggtgtttgcgaatggtctgggcaacaaagt 1014
Query: 729 tactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagatacgtg 788
|||| |||||||| ||||| |||| |||||| | || |||||||| ||||| ||||| |
Sbjct: 1013 tactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaatacgag 954
Query: 789 cgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtac 848
| || |||||||| | ||||| ||||| |||||||||| || ||||| || ||||
Sbjct: 953 caattctaacctccacacctgcacctcggtgataatccatggccagggtttctgcagtac 894
Query: 849 gcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtct 908
|||| || ||||| || || ||||| ||||||| ||||| || || |||||||||||||
Sbjct: 893 gctttccttcatcatagcaactcctctcaccgattggattcacgtttccccagtaagtct 834
Query: 909 ccacctgcgggtgctggagaggatcaccatagacctcactggtactggtgaggaggaacc 968
| ||| || |||| || ||||| |||||||| ||||| || |||||||| || ||||
Sbjct: 833 ctttctgtggatgctcaaggggatctccatagacttcacttgtgctggtgagcagaaacc 774
Query: 969 t 969
|
Sbjct: 773 t 773
>emb|BX823214.1|CNS0A7KG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS11ZE03 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1608
Score = 93.7 bits (47), Expect = 8e-017
Identities = 200/251 (79%)
Strand = Plus / Minus
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattg 778
|||||||||||||| |||||||| ||||| |||| |||||| | || |||||||| |||
Sbjct: 1026 gcaacaaagttactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttg 967
Query: 779 aagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtt 838
|| ||||| || || |||||||| | ||||| ||||| |||||||||| || |||
Sbjct: 966 aaaatacgagcaattctaacctccacacctgcacctcggtgataatccatggccagggtt 907
Query: 839 tcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccc 898
|| || |||||||| || ||||| || || ||||| ||||||| ||||| || || |||
Sbjct: 906 tctgcagtacgctttccttcatcatagcaactcctctcaccgattggattcacgtttccc 847
Query: 899 cagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtactggtg 958
||||||||||| ||| || |||| || ||||| |||||||| ||||| || ||||||
Sbjct: 846 cagtaagtctctttctgtggatgctcaaggggatctccatagacttcacttgtgctggtg 787
Query: 959 aggaggaacct 969
|| || |||||
Sbjct: 786 agcagaaacct 776
Score = 48.1 bits (24), Expect = 0.004
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 551 gcaagctcaagcatggtgaactcgccagggttacccaggttgaa 594
||||| |||||||| ||||| || ||||||||||| ||||||||
Sbjct: 1194 gcaagttcaagcattgtgaattctccagggttaccaaggttgaa 1151
>ref|NM_180363.1| Arabidopsis thaliana UXS1 (UDP-GLUCURONIC ACID DECARBOXYLASE 1);
catalytic AT3G53520 (UXS1) transcript variant
AT3G53520.1 mRNA, complete cds
Length = 1529
Score = 93.7 bits (47), Expect = 8e-017
Identities = 200/251 (79%)
Strand = Plus / Minus
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattg 778
|||||||||||||| |||||||| ||||| |||| |||||| | || |||||||| |||
Sbjct: 902 gcaacaaagttactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttg 843
Query: 779 aagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtt 838
|| ||||| || || |||||||| | ||||| ||||| |||||||||| || |||
Sbjct: 842 aaaatacgagcaattctaacctccacacctgcacctcggtgataatccatggccagggtt 783
Query: 839 tcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccc 898
|| || |||||||| || ||||| || || ||||| ||||||| ||||| || || |||
Sbjct: 782 tctgcagtacgctttccttcatcatagcaactcctctcaccgattggattcacgtttccc 723
Query: 899 cagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtactggtg 958
||||||||||| ||| || |||| || ||||| |||||||| ||||| || ||||||
Sbjct: 722 cagtaagtctctttctgtggatgctcaaggggatctccatagacttcacttgtgctggtg 663
Query: 959 aggaggaacct 969
|| || |||||
Sbjct: 662 agcagaaacct 652
Score = 48.1 bits (24), Expect = 0.004
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 551 gcaagctcaagcatggtgaactcgccagggttacccaggttgaa 594
||||| |||||||| ||||| || ||||||||||| ||||||||
Sbjct: 1068 gcaagttcaagcattgtgaattctccagggttaccaaggttgaa 1025
>ref|NM_115212.2| Arabidopsis thaliana UXS1 (UDP-GLUCURONIC ACID DECARBOXYLASE 1);
catalytic AT3G53520 (UXS1) transcript variant AT3G53520.2
mRNA, complete cds
Length = 1531
Score = 93.7 bits (47), Expect = 8e-017
Identities = 329/421 (78%), Gaps = 4/421 (0%)
Strand = Plus / Minus
Query: 551 gcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccacatgctcg 610
||||| |||||||| ||||| || ||||||||||| |||||||| || || ||||| |||
Sbjct: 1070 gcaagttcaagcattgtgaattctccagggttaccaaggttgaagggtcctacatgatcg 1011
Query: 611 ccttccat--cagcttcatcagaccctcaaccagatcagaaacatattggaaactcctgg 668
|||||| |||| || || ||||| |||| |||||||||||||| || || | |
Sbjct: 1010 ttttccattaaagctaca--agtccctccaccaagtcagaaacatattgaaagctacgag 953
Query: 669 tttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagt 728
| || ||||||||||||||||| |||| || | || | | | ||| ||||||||||
Sbjct: 952 tctgttttccatcaccataaacagtcattgggtgtttgcgaatggtctgggcaacaaagt 893
Query: 729 tactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagatacgtg 788
|||| |||||||| ||||| |||| |||||| | || |||||||| ||||| ||||| |
Sbjct: 892 tactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaatacgag 833
Query: 789 cgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtac 848
| || |||||||| | ||||| ||||| |||||||||| || ||||| || ||||
Sbjct: 832 caattctaacctccacacctgcacctcggtgataatccatggccagggtttctgcagtac 773
Query: 849 gcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtct 908
|||| || ||||| || || ||||| ||||||| ||||| || || |||||||||||||
Sbjct: 772 gctttccttcatcatagcaactcctctcaccgattggattcacgtttccccagtaagtct 713
Query: 909 ccacctgcgggtgctggagaggatcaccatagacctcactggtactggtgaggaggaacc 968
| ||| || |||| || ||||| |||||||| ||||| || |||||||| || ||||
Sbjct: 712 ctttctgtggatgctcaaggggatctccatagacttcacttgtgctggtgagcagaaacc 653
Query: 969 t 969
|
Sbjct: 652 t 652
>gb|BZ354118.1|BZ354118 SALK_123223.47.80.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_123223.47.80.x,
DNA sequence
Length = 279
Score = 91.7 bits (46), Expect = 3e-016
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 881 atgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatag 940
|||||||| || ||||||||||||||||| ||||| || ||||| ||||||||||||||
Sbjct: 206 atgggattaacgttgccccagtaagtctcaacctgaggatgctgcagaggatcaccataa 147
Query: 941 acctcactggtact 954
||||||||||||||
Sbjct: 146 acctcactggtact 133
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 91.7 bits (46), Expect = 3e-016
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 881 atgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatag 940
|||||||| || ||||||||||||||||| ||||| || ||||| ||||||||||||||
Sbjct: 23176615 atgggattaacgttgccccagtaagtctcaacctgaggatgctgcagaggatcaccataa 23176556
Query: 941 acctcactggtact 954
||||||||||||||
Sbjct: 23176555 acctcactggtact 23176542
Score = 87.7 bits (44), Expect = 5e-015
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
||||||||||||||| ||||||||||||| || ||||| |||||||| ||||| |||||
Sbjct: 23177559 accagatcagaaacaaattggaaactccttgtctgcttcccatcaccgtaaacagtcaat 23177500
Query: 698 ggctccttcctcagtgcctg 717
||||| ||||| ||||||||
Sbjct: 23177499 ggctctttccttagtgcctg 23177480
Score = 71.9 bits (36), Expect = 3e-010
Identities = 81/96 (84%)
Strand = Plus / Minus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
||||| || ||||| ||||| ||||| || ||||||||||| ||||||||||| || |||
Sbjct: 23178254 accttagcgagctcgagcatcgtgaattcaccagggttaccgaggttgaatgggccgaca 23178195
Query: 605 tgctcgccttccatcagcttcatcagaccctcaacc 640
|| || ||||||||||| |||||| ||| ||||||
Sbjct: 23178194 tgttctccttccatcagtctcatcaaaccttcaacc 23178159
Score = 61.9 bits (31), Expect = 3e-007
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||| |||||||||||||| |||||||| ||||| |||| |||||| | || |||||||
Sbjct: 19806640 cctgggcaacaaagttactaacaacacgcccatcatcaaggcacattctgggcccatatg 19806581
Query: 774 tattgaagatacgtgcgatcctaacct 800
| ||||| ||||| || || |||||||
Sbjct: 19806580 tgttgaaaatacgagcaattctaacct 19806554
Score = 50.1 bits (25), Expect = 0.001
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 796 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgcc 855
|||||||| |||||||| ||||| || |||||||||||||| || || ||||| || ||
Sbjct: 23177216 aacctcaacattggcacctcggtgatagtccatggtcaacgtctctgccgtacgttttcc 23177157
Query: 856 ctcatcgta 864
||||||||
Sbjct: 23177156 ttcatcgta 23177148
Score = 48.1 bits (24), Expect = 0.004
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 551 gcaagctcaagcatggtgaactcgccagggttacccaggttgaa 594
||||| |||||||| ||||| || ||||||||||| ||||||||
Sbjct: 19807001 gcaagttcaagcattgtgaattctccagggttaccaaggttgaa 19806958
Score = 44.1 bits (22), Expect = 0.068
Identities = 76/94 (80%)
Strand = Plus / Minus
Query: 876 caccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcac 935
||||||| ||||| || || |||||||||||||| ||| || |||| || ||||| |
Sbjct: 19806105 caccgattggattcacgtttccccagtaagtctctttctgtggatgctcaaggggatctc 19806046
Query: 936 catagacctcactggtactggtgaggaggaacct 969
||||||| ||||| || |||||||| || |||||
Sbjct: 19806045 catagacttcacttgtgctggtgagcagaaacct 19806012
Score = 42.1 bits (21), Expect = 0.27
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 995 agcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || |||| |||||||||||||
Sbjct: 17054499 agcatgttcagtgtgccaatcacattggtcttg 17054531
Score = 42.1 bits (21), Expect = 0.27
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 847 acgcttgccctcatcgtaacagctcctgacacc 879
||||||||| ||||| ||||||||||| |||||
Sbjct: 17054183 acgcttgccttcatcataacagctcctaacacc 17054215
Score = 40.1 bits (20), Expect = 1.1
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 644 tcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtca 695
|||||||||||||| || || | || || ||||||||||||||||| ||||
Sbjct: 19806803 tcagaaacatattgaaagctacgagtctgttttccatcaccataaacagtca 19806752
Score = 38.2 bits (19), Expect = 4.2
Identities = 49/59 (83%)
Strand = Plus / Plus
Query: 725 aagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagat 783
||||| || |||||||||||||| || ||| |||||| || ||||| || ||||||||
Sbjct: 17053953 aagttgcttacaacacggccatcatcgatgttcatgcgtggaccataagtgttgaagat 17054011
>emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BAC clone F26K9
Length = 110257
Score = 91.7 bits (46), Expect = 3e-016
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 881 atgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatag 940
|||||||| || ||||||||||||||||| ||||| || ||||| ||||||||||||||
Sbjct: 86358 atgggattaacgttgccccagtaagtctcaacctgaggatgctgcagaggatcaccataa 86299
Query: 941 acctcactggtact 954
||||||||||||||
Sbjct: 86298 acctcactggtact 86285
Score = 87.7 bits (44), Expect = 5e-015
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
||||||||||||||| ||||||||||||| || ||||| |||||||| ||||| |||||
Sbjct: 87302 accagatcagaaacaaattggaaactccttgtctgcttcccatcaccgtaaacagtcaat 87243
Query: 698 ggctccttcctcagtgcctg 717
||||| ||||| ||||||||
Sbjct: 87242 ggctctttccttagtgcctg 87223
Score = 71.9 bits (36), Expect = 3e-010
Identities = 81/96 (84%)
Strand = Plus / Minus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
||||| || ||||| ||||| ||||| || ||||||||||| ||||||||||| || |||
Sbjct: 87997 accttagcgagctcgagcatcgtgaattcaccagggttaccgaggttgaatgggccgaca 87938
Query: 605 tgctcgccttccatcagcttcatcagaccctcaacc 640
|| || ||||||||||| |||||| ||| ||||||
Sbjct: 87937 tgttctccttccatcagtctcatcaaaccttcaacc 87902
Score = 50.1 bits (25), Expect = 0.001
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 796 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgcc 855
|||||||| |||||||| ||||| || |||||||||||||| || || ||||| || ||
Sbjct: 86959 aacctcaacattggcacctcggtgatagtccatggtcaacgtctctgccgtacgttttcc 86900
Query: 856 ctcatcgta 864
||||||||
Sbjct: 86899 ttcatcgta 86891
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 91.7 bits (46), Expect = 3e-016
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 881 atgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatag 940
|||||||| || ||||||||||||||||| ||||| || ||||| ||||||||||||||
Sbjct: 23244359 atgggattaacgttgccccagtaagtctcaacctgaggatgctgcagaggatcaccataa 23244300
Query: 941 acctcactggtact 954
||||||||||||||
Sbjct: 23244299 acctcactggtact 23244286
Score = 87.7 bits (44), Expect = 5e-015
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
||||||||||||||| ||||||||||||| || ||||| |||||||| ||||| |||||
Sbjct: 23245303 accagatcagaaacaaattggaaactccttgtctgcttcccatcaccgtaaacagtcaat 23245244
Query: 698 ggctccttcctcagtgcctg 717
||||| ||||| ||||||||
Sbjct: 23245243 ggctctttccttagtgcctg 23245224
Score = 71.9 bits (36), Expect = 3e-010
Identities = 81/96 (84%)
Strand = Plus / Minus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
||||| || ||||| ||||| ||||| || ||||||||||| ||||||||||| || |||
Sbjct: 23245998 accttagcgagctcgagcatcgtgaattcaccagggttaccgaggttgaatgggccgaca 23245939
Query: 605 tgctcgccttccatcagcttcatcagaccctcaacc 640
|| || ||||||||||| |||||| ||| ||||||
Sbjct: 23245938 tgttctccttccatcagtctcatcaaaccttcaacc 23245903
Score = 61.9 bits (31), Expect = 3e-007
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||| |||||||||||||| |||||||| ||||| |||| |||||| | || |||||||
Sbjct: 19854167 cctgggcaacaaagttactaacaacacgcccatcatcaaggcacattctgggcccatatg 19854108
Query: 774 tattgaagatacgtgcgatcctaacct 800
| ||||| ||||| || || |||||||
Sbjct: 19854107 tgttgaaaatacgagcaattctaacct 19854081
Score = 50.1 bits (25), Expect = 0.001
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 796 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgcc 855
|||||||| |||||||| ||||| || |||||||||||||| || || ||||| || ||
Sbjct: 23244960 aacctcaacattggcacctcggtgatagtccatggtcaacgtctctgccgtacgttttcc 23244901
Query: 856 ctcatcgta 864
||||||||
Sbjct: 23244900 ttcatcgta 23244892
Score = 48.1 bits (24), Expect = 0.004
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 551 gcaagctcaagcatggtgaactcgccagggttacccaggttgaa 594
||||| |||||||| ||||| || ||||||||||| ||||||||
Sbjct: 19854528 gcaagttcaagcattgtgaattctccagggttaccaaggttgaa 19854485
Score = 44.1 bits (22), Expect = 0.068
Identities = 76/94 (80%)
Strand = Plus / Minus
Query: 876 caccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcac 935
||||||| ||||| || || |||||||||||||| ||| || |||| || ||||| |
Sbjct: 19853632 caccgattggattcacgtttccccagtaagtctctttctgtggatgctcaaggggatctc 19853573
Query: 936 catagacctcactggtactggtgaggaggaacct 969
||||||| ||||| || |||||||| || |||||
Sbjct: 19853572 catagacttcacttgtgctggtgagcagaaacct 19853539
Score = 42.1 bits (21), Expect = 0.27
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 995 agcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || |||| |||||||||||||
Sbjct: 17101437 agcatgttcagtgtgccaatcacattggtcttg 17101469
Score = 42.1 bits (21), Expect = 0.27
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 847 acgcttgccctcatcgtaacagctcctgacacc 879
||||||||| ||||| ||||||||||| |||||
Sbjct: 17101121 acgcttgccttcatcataacagctcctaacacc 17101153
Score = 40.1 bits (20), Expect = 1.1
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 644 tcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtca 695
|||||||||||||| || || | || || ||||||||||||||||| ||||
Sbjct: 19854330 tcagaaacatattgaaagctacgagtctgttttccatcaccataaacagtca 19854279
Score = 38.2 bits (19), Expect = 4.2
Identities = 49/59 (83%)
Strand = Plus / Plus
Query: 725 aagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagat 783
||||| || |||||||||||||| || ||| |||||| || ||||| || ||||||||
Sbjct: 17100891 aagttgcttacaacacggccatcatcgatgttcatgcgtggaccataagtgttgaagat 17100949
>gb|CB255558.1|CB255558 38-E010697-019-002-K10-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768K102Q 5-PRIME, mRNA sequence
Length = 571
Score = 89.7 bits (45), Expect = 1e-015
Identities = 81/93 (87%)
Strand = Plus / Minus
Query: 649 aacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcct 708
|||| ||||||||||||| || ||||| |||||||| ||||| ||||| ||||| |||||
Sbjct: 129 aacaaattggaaactccttgtctgcttcccatcaccgtaaacagtcaatggctctttcct 70
Query: 709 cagtgcctgagcaacaaagttactgacaacacg 741
|||||||| ||||| |||||||| ||||||||
Sbjct: 69 tagtgcctgtgcaacgaagttactaacaacacg 37
Score = 44.1 bits (22), Expect = 0.068
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 580 gttacccaggttgaatggccccacatgctcgccttccatcag 621
|||||| ||||||||||| || ||||| || |||||||||||
Sbjct: 127 gttaccgaggttgaatgggccgacatgttctccttccatcag 168
>emb|BX823176.1|CNS0A7M4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB95ZE05 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1648
Score = 85.7 bits (43), Expect = 2e-014
Identities = 328/421 (77%), Gaps = 4/421 (0%)
Strand = Plus / Minus
Query: 551 gcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccacatgctcg 610
||||| |||||||| ||||| || ||||||||||| |||||||| || || ||||| |||
Sbjct: 1248 gcaagttcaagcattgtgaattctccagggttaccaaggttgaagggtcctacatgatcg 1189
Query: 611 ccttccat--cagcttcatcagaccctcaaccagatcagaaacatattggaaactcctgg 668
|||||| |||| || || ||||| |||| |||||||||||||| || || | |
Sbjct: 1188 ttttccattaaagctaca--agtccctccaccaagtcagaaacatattgaaagctacgag 1131
Query: 669 tttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagt 728
| || ||||||||||||||||| |||| || | || | | | ||| ||||||||||
Sbjct: 1130 tctgttttccatcaccataaacagtcattgggtgtttgcgaatggtctgggcaacaaagt 1071
Query: 729 tactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagatacgtg 788
|||| |||||||| ||||| |||| |||||| | || |||||||| ||||| ||||| |
Sbjct: 1070 tactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaatacgag 1011
Query: 789 cgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtac 848
| || |||||||| | ||||| ||||| |||||||||| || ||||| || ||||
Sbjct: 1010 caattctaacctccacacctgcacctcggtgataatccatggccagggtttctgcagtac 951
Query: 849 gcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtct 908
|||| || ||||| || || ||||| ||||||| ||||| || || ||||||| |||||
Sbjct: 950 gctttccttcatcatagcaactcctctcaccgattggattcacgtttccccagtgagtct 891
Query: 909 ccacctgcgggtgctggagaggatcaccatagacctcactggtactggtgaggaggaacc 968
| ||| || |||| || ||||| |||||||| ||||| || |||||||| || ||||
Sbjct: 890 ctttctgtggatgctcaaggggatctccatagacttcacttgtgctggtgagcagaaacc 831
Query: 969 t 969
|
Sbjct: 830 t 830
>gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B22 map CIC06C03, complete
sequence
Length = 98937
Score = 83.8 bits (42), Expect = 8e-014
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 877 accgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcacc 936
|||||||||||| || ||||||||||||||||| ||||| || || || |||||||| ||
Sbjct: 8159 accgatgggattaacgttgccccagtaagtctcaacctgaggatgttgaagaggatctcc 8100
Query: 937 atagacctcactggtact 954
|||||||||||| |||||
Sbjct: 8099 atagacctcactcgtact 8082
Score = 65.9 bits (33), Expect = 2e-008
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
||||||||||| ||| | ||||||||||| || ||||| |||||||||||||| |||||
Sbjct: 8934 accagatcagagacaaactggaaactcctagtctgcttaccatcaccataaacagtcaaa 8875
Query: 698 ggctc 702
|||||
Sbjct: 8874 ggctc 8870
Score = 58.0 bits (29), Expect = 5e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
||||| || ||||| ||||||||||| || || |||||||| ||||| ||||| || |||
Sbjct: 9578 accttagcgagctcgagcatggtgaattcaccggggttaccaaggttaaatggaccgaca 9519
Query: 605 tgctcgccttccatcagcttcatcagacc 633
|| || || ||||||| | ||||||||||
Sbjct: 9518 tgttctccctccatcaacctcatcagacc 9490
Score = 42.1 bits (21), Expect = 0.27
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 824 tccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcc 872
||||||||||| || ||||| ||||| ||||| || |||||||| ||||
Sbjct: 8582 tccatggtcaaagtctcagccgtacgtttgccttcgtcgtaacaactcc 8534
>gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A22 map CIC06C03, complete
sequence
Length = 106355
Score = 83.8 bits (42), Expect = 8e-014
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 877 accgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcacc 936
|||||||||||| || ||||||||||||||||| ||||| || || || |||||||| ||
Sbjct: 7917 accgatgggattaacgttgccccagtaagtctcaacctgaggatgttgaagaggatctcc 7976
Query: 937 atagacctcactggtact 954
|||||||||||| |||||
Sbjct: 7977 atagacctcactcgtact 7994
Score = 65.9 bits (33), Expect = 2e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
||||||||||| ||| | ||||||||||| || ||||| |||||||||||||| |||||
Sbjct: 7142 accagatcagagacaaactggaaactcctagtctgcttaccatcaccataaacagtcaaa 7201
Query: 698 ggctc 702
|||||
Sbjct: 7202 ggctc 7206
Score = 58.0 bits (29), Expect = 5e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
||||| || ||||| ||||||||||| || || |||||||| ||||| ||||| || |||
Sbjct: 6498 accttagcgagctcgagcatggtgaattcaccggggttaccaaggttaaatggaccgaca 6557
Query: 605 tgctcgccttccatcagcttcatcagacc 633
|| || || ||||||| | ||||||||||
Sbjct: 6558 tgttctccctccatcaacctcatcagacc 6586
Score = 42.1 bits (21), Expect = 0.27
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 824 tccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcc 872
||||||||||| || ||||| ||||| ||||| || |||||||| ||||
Sbjct: 7494 tccatggtcaaagtctcagccgtacgtttgccttcgtcgtaacaactcc 7542
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 83.8 bits (42), Expect = 8e-014
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 877 accgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcacc 936
|||||||||||| || ||||||||||||||||| ||||| || || || |||||||| ||
Sbjct: 19547551 accgatgggattaacgttgccccagtaagtctcaacctgaggatgttgaagaggatctcc 19547610
Query: 937 atagacctcactggtact 954
|||||||||||| |||||
Sbjct: 19547611 atagacctcactcgtact 19547628
Score = 65.9 bits (33), Expect = 2e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
||||||||||| ||| | ||||||||||| || ||||| |||||||||||||| |||||
Sbjct: 19546776 accagatcagagacaaactggaaactcctagtctgcttaccatcaccataaacagtcaaa 19546835
Query: 698 ggctc 702
|||||
Sbjct: 19546836 ggctc 19546840
Score = 58.0 bits (29), Expect = 5e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
||||| || ||||| ||||||||||| || || |||||||| ||||| ||||| || |||
Sbjct: 19546132 accttagcgagctcgagcatggtgaattcaccggggttaccaaggttaaatggaccgaca 19546191
Query: 605 tgctcgccttccatcagcttcatcagacc 633
|| || || ||||||| | ||||||||||
Sbjct: 19546192 tgttctccctccatcaacctcatcagacc 19546220
Score = 42.1 bits (21), Expect = 0.27
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 824 tccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcc 872
||||||||||| || ||||| ||||| ||||| || |||||||| ||||
Sbjct: 19547128 tccatggtcaaagtctcagccgtacgtttgccttcgtcgtaacaactcc 19547176
>gb|N38350.1|N38350 19577 Lambda-PRL2 Arabidopsis thaliana cDNA clone 214G12T7 3', mRNA
sequence
Length = 500
Score = 69.9 bits (35), Expect = 1e-009
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||| ||||| || ||||| ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 87 tggaccaccttagcgagctcgagcatcgtgaattcaccagggttaccgaggttgaatggg 28
Query: 599 cccacatgctcgccttccatcag 621
|| ||||| || |||||||||||
Sbjct: 27 ccgacatgttctccttccatcag 5
>gb|BE530488.1|BE530488 M77D03STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone 600040010R1 5', mRNA sequence
Length = 256
Score = 65.9 bits (33), Expect = 2e-008
Identities = 129/161 (80%)
Strand = Plus / Minus
Query: 809 gcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgtaacag 868
||||| ||||| |||||||||| || ||||| || |||||||| || ||||| || ||
Sbjct: 189 gcacctcggtgataatccatggccagggtttctgcagtacgctttccttcatcatagcaa 130
Query: 869 ctcctgacaccgatgggattgacattgccccagtaagtctccacctgcgggtgctggaga 928
||||| ||||||| ||||| || || |||||||||||||| ||| || |||| ||
Sbjct: 129 ctcctctcaccgattggattcacgtttccccagtaagtctctttctgtggatgctcaagg 70
Query: 929 ggatcaccatagacctcactggtactggtgaggaggaacct 969
||||| |||||||| ||||| || |||||||| || |||||
Sbjct: 69 ggatctccatagacttcacttgtgctggtgagcagaaacct 29
>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12
Length = 144628
Score = 61.9 bits (31), Expect = 3e-007
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||| |||||||||||||| |||||||| ||||| |||| |||||| | || |||||||
Sbjct: 83859 cctgggcaacaaagttactaacaacacgcccatcatcaaggcacattctgggcccatatg 83800
Query: 774 tattgaagatacgtgcgatcctaacct 800
| ||||| ||||| || || |||||||
Sbjct: 83799 tgttgaaaatacgagcaattctaacct 83773
Score = 48.1 bits (24), Expect = 0.004
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 551 gcaagctcaagcatggtgaactcgccagggttacccaggttgaa 594
||||| |||||||| ||||| || ||||||||||| ||||||||
Sbjct: 84220 gcaagttcaagcattgtgaattctccagggttaccaaggttgaa 84177
Score = 44.1 bits (22), Expect = 0.068
Identities = 76/94 (80%)
Strand = Plus / Minus
Query: 876 caccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcac 935
||||||| ||||| || || |||||||||||||| ||| || |||| || ||||| |
Sbjct: 83324 caccgattggattcacgtttccccagtaagtctctttctgtggatgctcaaggggatctc 83265
Query: 936 catagacctcactggtactggtgaggaggaacct 969
||||||| ||||| || |||||||| || |||||
Sbjct: 83264 catagacttcacttgtgctggtgagcagaaacct 83231
Score = 40.1 bits (20), Expect = 1.1
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 644 tcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtca 695
|||||||||||||| || || | || || ||||||||||||||||| ||||
Sbjct: 84022 tcagaaacatattgaaagctacgagtctgttttccatcaccataaacagtca 83971
>gb|AQ967293.1|AQ967293 LERIQ83TF LERG Arabidopsis thaliana genomic clone LERIQ83, DNA
sequence
Length = 389
Score = 58.0 bits (29), Expect = 5e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
||||| || ||||| ||||||||||| || || |||||||| ||||| ||||| || |||
Sbjct: 163 accttagcgagctcgagcatggtgaattcaccggggttaccaaggttaaatggaccgaca 104
Query: 605 tgctcgccttccatcagcttcatcagacc 633
|| || || ||||||| | ||||||||||
Sbjct: 103 tgttctccctccatcaacctcatcagacc 75
>gb|AQ969939.1|AQ969939 LERJR50TF LERG Arabidopsis thaliana genomic clone LERJR50, DNA
sequence
Length = 630
Score = 58.0 bits (29), Expect = 5e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
||||| || ||||| ||||||||||| || || |||||||| ||||| ||||| || |||
Sbjct: 301 accttagcgagctcgagcatggtgaattcaccggggttaccaaggttaaatggaccgaca 242
Query: 605 tgctcgccttccatcagcttcatcagacc 633
|| || || ||||||| | ||||||||||
Sbjct: 241 tgttctccctccatcaacctcatcagacc 213
>gb|BP582514.1|BP582514 BP582514 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-36-J02 3',
mRNA sequence
Length = 457
Score = 58.0 bits (29), Expect = 5e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
||||| || ||||| ||||||||||| || || |||||||| ||||| ||||| || |||
Sbjct: 367 accttagcgagctcgagcatggtgaattcaccggggttaccaaggttaaatggaccgaca 426
Query: 605 tgctcgccttccatcagcttcatcagacc 633
|| || || ||||||| | ||||||||||
Sbjct: 427 tgttctccctccatcaacctcatcagacc 455
>gb|BP585895.1|BP585895 BP585895 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-04-E21 3',
mRNA sequence
Length = 450
Score = 58.0 bits (29), Expect = 5e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
||||| || ||||| ||||||||||| || || |||||||| ||||| ||||| || |||
Sbjct: 344 accttagcgagctcgagcatggtgaattcaccggggttaccaaggttaaatggaccgaca 403
Query: 605 tgctcgccttccatcagcttcatcagacc 633
|| || || ||||||| | ||||||||||
Sbjct: 404 tgttctccctccatcaacctcatcagacc 432
>gb|AQ969940.1|AQ969940 LERJR50TR LERG Arabidopsis thaliana genomic clone LERJR50, DNA
sequence
Length = 529
Score = 56.0 bits (28), Expect = 2e-005
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 554 agctcaagcatggtgaactcgccagggttacccaggttgaatggccccacatgctcgcct 613
||||| ||||||||||| || || |||||||| ||||| ||||| || ||||| || ||
Sbjct: 309 agctcgagcatggtgaattcaccggggttaccaaggttaaatggaccgacatgttctccc 368
Query: 614 tccatcagcttcatcagacc 633
||||||| | ||||||||||
Sbjct: 369 tccatcaacctcatcagacc 388
>gb|BX839560.1|BX839560 BX839560 Arabidopsis thaliana Adult vegetative tissue Col-0
Arabidopsis thaliana cDNA clone GSLTLS49ZB08 5PRIM, mRNA
sequence
Length = 896
Score = 52.0 bits (26), Expect = 3e-004
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgcccca 900
||||||||| ||||| ||||||||||| ||||| || || |||||||| |||||
Sbjct: 645 acgcttgccttcatcataacagctcctaacaccaattgggttgacatttcccca 592
Score = 42.1 bits (21), Expect = 0.27
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 995 agcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || |||| |||||||||||||
Sbjct: 497 agcatgttcagtgtgccaatcacattggtcttg 465
Score = 38.2 bits (19), Expect = 4.2
Identities = 49/59 (83%)
Strand = Plus / Minus
Query: 725 aagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagat 783
||||| || |||||||||||||| || |||| |||||| | ||||| || ||||||||
Sbjct: 767 aagttgctcacaacacggccatcatcgatgctcatgcgtgcaccataagtgttgaagat 709
>gb|CK121683.1|CK121683 202b24.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011B24202
5-PRIME, mRNA sequence
Length = 762
Score = 52.0 bits (26), Expect = 3e-004
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgcccca 900
||||||||| ||||| ||||||||||| ||||| || || |||||||| |||||
Sbjct: 213 acgcttgccttcatcataacagctcctaacaccaattgggttgacatttcccca 160
Score = 42.1 bits (21), Expect = 0.27
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 995 agcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || |||| |||||||||||||
Sbjct: 65 agcatgttcagtgtgccaatcacattggtcttg 33
Score = 38.2 bits (19), Expect = 4.2
Identities = 49/59 (83%)
Strand = Plus / Minus
Query: 725 aagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagat 783
||||| || |||||||||||||| || ||| |||||| || ||||| || ||||||||
Sbjct: 335 aagttgcttacaacacggccatcatcgatgttcatgcgtggaccataagtgttgaagat 277
>gb|AY072098.1| Arabidopsis thaliana putative dTDP-glucose 4-6-dehydratase
(At3g46440) mRNA, complete cds
Length = 1356
Score = 52.0 bits (26), Expect = 3e-004
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgcccca 900
||||||||| ||||| ||||||||||| ||||| || || |||||||| |||||
Sbjct: 656 acgcttgccttcatcataacagctcctaacaccaattgggttgacatttcccca 603
Score = 42.1 bits (21), Expect = 0.27
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 995 agcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || |||| |||||||||||||
Sbjct: 508 agcatgttcagtgtgccaatcacattggtcttg 476
Score = 38.2 bits (19), Expect = 4.2
Identities = 49/59 (83%)
Strand = Plus / Minus
Query: 725 aagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagat 783
||||| || |||||||||||||| || ||| |||||| || ||||| || ||||||||
Sbjct: 778 aagttgcttacaacacggccatcatcgatgttcatgcgtggaccataagtgttgaagat 720
>gb|AY096586.1| Arabidopsis thaliana putative dTDP-glucose 4-6-dehydratases
(At3g46440) mRNA, complete cds
Length = 1057
Score = 52.0 bits (26), Expect = 3e-004
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgcccca 900
||||||||| ||||| ||||||||||| ||||| || || |||||||| |||||
Sbjct: 531 acgcttgccttcatcataacagctcctaacaccaattgggttgacatttcccca 478
Score = 42.1 bits (21), Expect = 0.27
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 995 agcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || |||| |||||||||||||
Sbjct: 383 agcatgttcagtgtgccaatcacattggtcttg 351
Score = 38.2 bits (19), Expect = 4.2
Identities = 49/59 (83%)
Strand = Plus / Minus
Query: 725 aagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagat 783
||||| || |||||||||||||| || ||| |||||| || ||||| || ||||||||
Sbjct: 653 aagttgcttacaacacggccatcatcgatgttcatgcgtggaccataagtgttgaagat 595
>gb|AY087118.1| Arabidopsis thaliana clone 31901 mRNA, complete sequence
Length = 1281
Score = 52.0 bits (26), Expect = 3e-004
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgcccca 900
||||||||| ||||| ||||||||||| ||||| || || |||||||| |||||
Sbjct: 592 acgcttgccttcatcataacagctcctaacaccaattgggttgacatttcccca 539
>emb|BX824968.1|CNS0A6QT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH86ZD03 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1211
Score = 52.0 bits (26), Expect = 3e-004
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgcccca 900
||||||||| ||||| ||||||||||| ||||| || || |||||||| |||||
Sbjct: 555 acgcttgccttcatcataacagctcctaacaccaattgggttgacatttcccca 502
Score = 40.1 bits (20), Expect = 1.1
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 996 gcatgttcagagtcccaaccacattggtcttg 1027
|||||||||| || |||| |||||||||||||
Sbjct: 406 gcatgttcagtgtgccaatcacattggtcttg 375
Score = 38.2 bits (19), Expect = 4.2
Identities = 49/59 (83%)
Strand = Plus / Minus
Query: 725 aagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagat 783
||||| || |||||||||||||| || ||| |||||| || ||||| || ||||||||
Sbjct: 677 aagttgcttacaacacggccatcatcgatgttcatgcgtggaccataagtgttgaagat 619
>emb|BX823718.1|CNS0A7QP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS6ZC01 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1114
Score = 52.0 bits (26), Expect = 3e-004
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgcccca 900
||||||||| ||||| ||||||||||| ||||| || || |||||||| |||||
Sbjct: 480 acgcttgccttcatcataacagctcctaacaccaattgggttgacatttcccca 427
Score = 42.1 bits (21), Expect = 0.27
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 995 agcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || |||| |||||||||||||
Sbjct: 332 agcatgttcagtgtgccaatcacattggtcttg 300
>ref|NM_114511.2| Arabidopsis thaliana UXS5; catalytic AT3G46440 (UXS5) transcript
variant AT3G46440.1 mRNA, complete cds
Length = 1374
Score = 52.0 bits (26), Expect = 3e-004
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgcccca 900
||||||||| ||||| ||||||||||| ||||| || || |||||||| |||||
Sbjct: 656 acgcttgccttcatcataacagctcctaacaccaattgggttgacatttcccca 603
Score = 42.1 bits (21), Expect = 0.27
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 995 agcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || |||| |||||||||||||
Sbjct: 508 agcatgttcagtgtgccaatcacattggtcttg 476
Score = 38.2 bits (19), Expect = 4.2
Identities = 49/59 (83%)
Strand = Plus / Minus
Query: 725 aagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagat 783
||||| || |||||||||||||| || ||| |||||| || ||||| || ||||||||
Sbjct: 778 aagttgcttacaacacggccatcatcgatgttcatgcgtggaccataagtgttgaagat 720
>ref|NM_001035743.1| Arabidopsis thaliana UXS5; catalytic AT3G46440 (UXS5) transcript
variant AT3G46440.2 mRNA, complete cds
Length = 1464
Score = 52.0 bits (26), Expect = 3e-004
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgcccca 900
||||||||| ||||| ||||||||||| ||||| || || |||||||| |||||
Sbjct: 746 acgcttgccttcatcataacagctcctaacaccaattgggttgacatttcccca 693
Score = 42.1 bits (21), Expect = 0.27
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 995 agcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || |||| |||||||||||||
Sbjct: 598 agcatgttcagtgtgccaatcacattggtcttg 566
Score = 38.2 bits (19), Expect = 4.2
Identities = 49/59 (83%)
Strand = Plus / Minus
Query: 725 aagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagat 783
||||| || |||||||||||||| || ||| |||||| || ||||| || ||||||||
Sbjct: 868 aagttgcttacaacacggccatcatcgatgttcatgcgtggaccataagtgttgaagat 810
>gb|H76303.1|H76303 18008 Lambda-PRL2 Arabidopsis thaliana cDNA clone 200B11T7, mRNA
sequence
Length = 276
Score = 50.1 bits (25), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 551 gcaagctcaagcatggtgaactcgccagggttacccaggttgaa 594
||||| |||||||| ||||| || ||||||||||| ||||||||
Sbjct: 140 gcaaggtcaagcattgtgaantctccagggttaccaaggttgaa 97
>gb|BE530706.1|BE530706 M78I20STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone 600040277R1 5', mRNA sequence
Length = 256
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 926 agaggatcaccatagacctcactggtact 954
|||||||||||||| ||||||||||||||
Sbjct: 256 agaggatcaccataaacctcactggtact 228
>gb|AV782290.1|AV782290 AV782290 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-15-P08 3',
mRNA sequence
Length = 682
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacat 759
|||||||||||||| |||||||| ||||| |||| ||||||
Sbjct: 626 gcaacaaagttactaacaacacgcccatcatcaaggcacat 666
Score = 50.1 bits (25), Expect = 0.001
Identities = 118/147 (80%), Gaps = 4/147 (2%)
Strand = Plus / Plus
Query: 551 gcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccacatgctcg 610
||||| |||||||| ||||| || ||||||||||| |||||||| || || ||||| |||
Sbjct: 458 gcaagttcaagcattgtgaattctccagggttaccaaggttgaagggtcctacatgatcg 517
Query: 611 ccttccat--cagcttcatcagaccctcaaccagatcagaaacatattggaaactcctgg 668
|||||| |||| || || ||||| |||| |||||||||||||| || || | |
Sbjct: 518 ttttccattaaagctaca--agtccctccaccaagtcagaaacatattgaaagctacgag 575
Query: 669 tttgctttccatcaccataaaccgtca 695
| || ||||||||||||||||| ||||
Sbjct: 576 tctgttttccatcaccataaacagtca 602
>gb|BP571979.1|BP571979 BP571979 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-78-E23 3',
mRNA sequence
Length = 444
Score = 50.1 bits (25), Expect = 0.001
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
||||| || ||||| ||||||||||| || || |||||||| ||||| ||||| || |||
Sbjct: 344 accttagcgagctcgagcatggtgaattcaccggggttaccaaggttaaatggaccgaca 403
Query: 605 tgctcgccttccatcagcttcatcagacc 633
|| || || |||||| | ||||||||||
Sbjct: 404 tgttctccctccatcgacctcatcagacc 432
>gb|CD530058.1|CD530058 27F15 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 448
Score = 48.1 bits (24), Expect = 0.004
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 551 gcaagctcaagcatggtgaactcgccagggttacccaggttgaa 594
||||| |||||||| ||||| || ||||||||||| ||||||||
Sbjct: 53 gcaagttcaagcattgtgaattctccagggttaccaaggttgaa 10
>gb|BX834349.1|BX834349 BX834349 Arabidopsis thaliana Adult vegetative tissue Col-0
Arabidopsis thaliana cDNA clone GSLTLS45ZB03 3PRIM, mRNA
sequence
Length = 543
Score = 48.1 bits (24), Expect = 0.004
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 551 gcaagctcaagcatggtgaactcgccagggttacccaggttgaa 594
||||| |||||||| ||||| || ||||||||||| ||||||||
Sbjct: 395 gcaagttcaagcattgtgaattctccagggttaccaaggttgaa 438
>gb|AV439961.1|AV439961 AV439961 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APD31d11_f 3', mRNA
sequence
Length = 535
Score = 48.1 bits (24), Expect = 0.004
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 551 gcaagctcaagcatggtgaactcgccagggttacccaggttgaa 594
||||| |||||||| ||||| || ||||||||||| ||||||||
Sbjct: 430 gcaagttcaagcattgtgaattctccagggttaccaaggttgaa 473
>gb|AI100480.1|AI100480 34855 Lambda-PRL2 Arabidopsis thaliana cDNA clone 90J19XP 3', mRNA
sequence
Length = 460
Score = 46.1 bits (23), Expect = 0.017
Identities = 84/103 (81%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
||||| || ||||| ||||||||||| || | ||| |||| ||||| ||||| || |||
Sbjct: 130 accttagcgagctcgagcatggtgaattc-acgggggtaccaaggttaaatggaccgaca 72
Query: 605 tgctcgccttccatcagcttcatcagaccctcaaccagatcag 647
|| || || ||||||| | |||||||||| || ||||||||||
Sbjct: 71 tgttctccctccatcaacctcatcagaccttccaccagatcag 29
>gb|BP564295.1|BP564295 BP564295 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-07-B04 3',
mRNA sequence
Length = 442
Score = 46.1 bits (23), Expect = 0.017
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 554 agctcaagcatggtgaactcgccagggttacccaggttgaatggccccacatgctcgcct 613
||||| ||||||||||| || || |||||||| ||||| ||||| || ||||| || ||
Sbjct: 374 agctcgagcatggtgaattcaccggggttaccaaggttaaatggaccgacatgttctccc 433
Query: 614 tccatca 620
|||||||
Sbjct: 434 tccatca 440
>gb|BP575347.1|BP575347 BP575347 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-12-A08 3',
mRNA sequence
Length = 421
Score = 46.1 bits (23), Expect = 0.017
Identities = 62/75 (82%)
Strand = Plus / Plus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
||||| || ||||| ||||||||||| || || |||||||| ||||| ||||| || |||
Sbjct: 344 accttagcgagctcgagcatggtgaattcaccggggttaccaaggttaaatggaccgaca 403
Query: 605 tgctcgccttccatc 619
|| || || ||||||
Sbjct: 404 tgttctccctccatc 418
>gb|AV567402.1|AV567402 AV567402 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQL13a08F 3', mRNA sequence
Length = 418
Score = 44.1 bits (22), Expect = 0.068
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
||||| || ||||| ||||||||||| || || |||||||| ||||| ||||| || |||
Sbjct: 352 accttagcgagctcgagcatggtgaattcaccggggttaccaaggttaaatggaccgaca 411
Query: 605 tg 606
||
Sbjct: 412 tg 413
>gb|BP593145.1|BP593145 BP593145 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-20-P16 3',
mRNA sequence
Length = 442
Score = 44.1 bits (22), Expect = 0.068
Identities = 73/90 (81%)
Strand = Plus / Plus
Query: 517 tgcgttggggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgcc 576
|||||| ||||| ||||| || || || ||||| || ||| | ||||||||||| || ||
Sbjct: 334 tgcgttcgggtcaatggtctcttgaaccaccttagcgagcccgagcatggtgaattcacc 393
Query: 577 agggttacccaggttgaatggccccacatg 606
|||||||| ||||| ||||| || |||||
Sbjct: 394 ggggttaccaaggttaaatggaccgacatg 423
>gb|CW800989.1|CW800989 WiscDsLox293-296invD4 Arabidopsis thaliana T-DNA insertion flanking
sequences Arabidopsis thaliana genomic, DNA sequence
Length = 764
Score = 42.1 bits (21), Expect = 0.27
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 847 acgcttgccctcatcgtaacagctcctgacacc 879
||||||||| ||||| ||||||||||| |||||
Sbjct: 695 acgcttgccttcatcataacagctcctaacacc 727
>gb|BE521467.1|BE521467 M19G5STM Arabidopsis developing seed Arabidopsis thaliana cDNA clone
M19G5 5', mRNA sequence
Length = 333
Score = 42.1 bits (21), Expect = 0.27
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 995 agcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || |||| |||||||||||||
Sbjct: 231 agcatgttcagtgtgccaatcacattggtcttg 199
>gb|AV788561.1|AV788561 AV788561 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-80-C09 3',
mRNA sequence
Length = 420
Score = 42.1 bits (21), Expect = 0.27
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatgg 597
||||| || ||||| ||||||||||| || || |||||||| ||||| |||||
Sbjct: 364 accttagcgagctcgagcatggtgaattcaccggggttaccaaggttaaatgg 416
>gb|AV814478.1|AV814478 AV814478 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-83-C10 3',
mRNA sequence
Length = 395
Score = 42.1 bits (21), Expect = 0.27
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatgg 597
||||| || ||||| ||||||||||| || || |||||||| ||||| |||||
Sbjct: 339 accttagcgagctcgagcatggtgaattcaccggggttaccaaggttaaatgg 391
>gb|AV829784.1|AV829784 AV829784 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-55-K10 5', mRNA
sequence
Length = 606
Score = 42.1 bits (21), Expect = 0.27
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 995 agcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || |||| |||||||||||||
Sbjct: 509 agcatgttcagtgtgccaatcacattggtcttg 477
>gb|AU237002.1|AU237002 AU237002 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-41-G24 5',
mRNA sequence
Length = 556
Score = 42.1 bits (21), Expect = 0.27
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 995 agcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || |||| |||||||||||||
Sbjct: 508 agcatgttcagtgtgccaatcacattggtcttg 476
>gb|BP565000.1|BP565000 BP565000 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-10-F18 3',
mRNA sequence
Length = 414
Score = 42.1 bits (21), Expect = 0.27
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatgg 597
||||| || ||||| ||||||||||| || || |||||||| ||||| |||||
Sbjct: 346 accttagcgagctcgagcatggtgaattcaccggggttaccaaggttaaatgg 398
>emb|AL133298.1|ATF18L15 Arabidopsis thaliana DNA chromosome 3, BAC clone F18L15
Length = 100328
Score = 42.1 bits (21), Expect = 0.27
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 995 agcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || |||| |||||||||||||
Sbjct: 76638 agcatgttcagtgtgccaatcacattggtcttg 76670
Score = 42.1 bits (21), Expect = 0.27
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 847 acgcttgccctcatcgtaacagctcctgacacc 879
||||||||| ||||| ||||||||||| |||||
Sbjct: 76322 acgcttgccttcatcataacagctcctaacacc 76354
Score = 38.2 bits (19), Expect = 4.2
Identities = 49/59 (83%)
Strand = Plus / Plus
Query: 725 aagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagat 783
||||| || |||||||||||||| || ||| |||||| || ||||| || ||||||||
Sbjct: 76092 aagttgcttacaacacggccatcatcgatgttcatgcgtggaccataagtgttgaagat 76150
>gb|B97419.1|B97419 T33K13TF TAMU Arabidopsis thaliana genomic clone T33K13, DNA
sequence
Length = 185
Score = 40.1 bits (20), Expect = 1.1
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 354 cgtcttggtcgccgaagatg 373
||||||||||||||||||||
Sbjct: 30 cgtcttggtcgccgaagatg 49
>gb|AV820936.1|AV820936 AV820936 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-13-C05 3',
mRNA sequence
Length = 415
Score = 40.1 bits (20), Expect = 1.1
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 551 gcaagctcaagcatggtgaactcgccagggttacccaggt 590
||||| |||||||| ||||| || ||||||||||| ||||
Sbjct: 376 gcaagttcaagcattgtgaattctccagggttaccaaggt 415
>gb|AV822186.1|AV822186 AV822186 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-02-L20 5', mRNA
sequence
Length = 651
Score = 40.1 bits (20), Expect = 1.1
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 992 ccgagcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || || |||| |||||||||||||
Sbjct: 479 ccgagcatgttgagtgtaccaatcacattggtcttg 444
>gb|CB260697.1|CB260697 73-E9517-012-003-A10-T7R MPIZ-ADIS-012 Arabidopsis thaliana cDNA
clone MPIZp769A103Q 5-PRIME, mRNA sequence
Length = 592
Score = 40.1 bits (20), Expect = 1.1
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 992 ccgagcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || || |||| |||||||||||||
Sbjct: 494 ccgagcatgttgagtgtaccaatcacattggtcttg 459
>gb|AV527350.1|AV527350 AV527350 Arabidopsis thaliana aboveground organs two to six-week old
Arabidopsis thaliana cDNA clone APZ34h10R 5', mRNA
sequence
Length = 275
Score = 40.1 bits (20), Expect = 1.1
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 992 ccgagcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || || |||| |||||||||||||
Sbjct: 198 ccgagcatgttgagtgtaccaatcacattggtcttg 163
>gb|BP592035.1|BP592035 BP592035 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-16-N04 3',
mRNA sequence
Length = 442
Score = 40.1 bits (20), Expect = 1.1
Identities = 60/72 (83%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 560 agcatggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatc 619
||||||||||| || || |||||||| ||||| ||||| || ||||| || || ||||||
Sbjct: 361 agcatggtgaattcaccggggttaccaaggttaaatggaccgacatg-tctccctccatc 419
Query: 620 agcttcatcaga 631
| | ||||||||
Sbjct: 420 accctcatcaga 431
>gb|CB252277.1|CB252277 30-E018429-019-008-L07-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768L078Q 5-PRIME, mRNA sequence
Length = 705
Score = 40.1 bits (20), Expect = 1.1
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 992 ccgagcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || || |||| |||||||||||||
Sbjct: 456 ccgagcatgttgagtgtaccaatcacattggtcttg 421
>gb|AF375442.1| Arabidopsis thaliana AT5g59290/mnc17_180 mRNA, complete cds
Length = 1364
Score = 40.1 bits (20), Expect = 1.1
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 992 ccgagcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || || |||| |||||||||||||
Sbjct: 479 ccgagcatgttgagtgtaccaatcacattggtcttg 444
>gb|AY093958.1| Arabidopsis thaliana AT5g59290/mnc17_180 mRNA, complete cds
Length = 1029
Score = 40.1 bits (20), Expect = 1.1
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 992 ccgagcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || || |||| |||||||||||||
Sbjct: 389 ccgagcatgttgagtgtaccaatcacattggtcttg 354
>gb|AF387789.1| Arabidopsis thaliana UDP-glucuronic acid decarboxylase (UXS3) mRNA,
complete cds
Length = 1029
Score = 40.1 bits (20), Expect = 1.1
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 992 ccgagcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || || |||| |||||||||||||
Sbjct: 389 ccgagcatgttgagtgtaccaatcacattggtcttg 354
>emb|AJ530507.1|ATH530507 Arabidopsis thaliana T-DNA flanking sequence, left border, clone
211A10
Length = 400
Score = 40.1 bits (20), Expect = 1.1
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttg 592
||||| || ||||| ||||| ||||| || ||||||||||| ||||||
Sbjct: 48 accttagcgagctcgagcatcgtgaattcaccagggttaccgaggttg 1
>gb|AY088443.1| Arabidopsis thaliana clone 6701 mRNA, complete sequence
Length = 1418
Score = 40.1 bits (20), Expect = 1.1
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 992 ccgagcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || || |||| |||||||||||||
Sbjct: 535 ccgagcatgttgagtgtaccaatcacattggtcttg 500
>emb|BX832416.1|CNS0A12Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH71ZD04 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1303
Score = 40.1 bits (20), Expect = 1.1
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 992 ccgagcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || || |||| |||||||||||||
Sbjct: 461 ccgagcatgttgagtgtaccaatcacattggtcttg 426
>dbj|AB016890.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC17
Length = 75803
Score = 40.1 bits (20), Expect = 1.1
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 992 ccgagcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || || |||| |||||||||||||
Sbjct: 56275 ccgagcatgttgagtgtaccaatcacattggtcttg 56310
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 40.1 bits (20), Expect = 1.1
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 992 ccgagcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || || |||| |||||||||||||
Sbjct: 21272316 ccgagcatgttgagtgtaccaatcacattggtcttg 21272351
>ref|NM_125319.2| Arabidopsis thaliana UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE);
catalytic AT5G59290 (UXS3) mRNA, complete cds
Length = 1459
Score = 40.1 bits (20), Expect = 1.1
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 992 ccgagcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || || |||| |||||||||||||
Sbjct: 535 ccgagcatgttgagtgtaccaatcacattggtcttg 500
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 40.1 bits (20), Expect = 1.1
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 992 ccgagcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| || || |||| |||||||||||||
Sbjct: 23934229 ccgagcatgttgagtgtaccaatcacattggtcttg 23934264
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1246 tgttgttgaaaattgaaat 1264
|||||||||||||||||||
Sbjct: 22338914 tgttgttgaaaattgaaat 22338932
>gb|B27400.1|B27400 T7A14TF TAMU Arabidopsis thaliana genomic clone T7A14, DNA sequence
Length = 554
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 947 ctggtactggtgaggagga 965
|||||||||||||||||||
Sbjct: 457 ctggtactggtgaggagga 439
>gb|CL474567.1|CL474567 SAIL_221_H03.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_221_H03.v1, DNA sequence
Length = 1020
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1149 aaaacaagtaaagcataag 1167
|||||||||||||||||||
Sbjct: 919 aaaacaagtaaagcataag 901
>emb|CR401929.1| Arabidopsis thaliana T-DNA flanking sequence GK-850F04-025840,
genomic survey sequence
Length = 187
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 138 agaactgagaaagaaaaaa 156
|||||||||||||||||||
Sbjct: 34 agaactgagaaagaaaaaa 52
>gb|BE039137.1|BE039137 AB14B03 AB Arabidopsis thaliana cDNA 5' similar to metallothionein
protein 1a, mRNA sequence
Length = 708
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 33 tttataccatatatatgat 51
|||||||||||||||||||
Sbjct: 225 tttataccatatatatgat 207
>gb|AU228060.1|AU228060 AU228060 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-45-A08 3',
mRNA sequence
Length = 438
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 947 ctggtactggtgaggagga 965
|||||||||||||||||||
Sbjct: 263 ctggtactggtgaggagga 245
>gb|AU228873.1|AU228873 AU228873 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-56-K16 3',
mRNA sequence
Length = 367
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1246 tgttgttgaaaattgaaat 1264
|||||||||||||||||||
Sbjct: 308 tgttgttgaaaattgaaat 326
>gb|AV555321.1|AV555321 AV555321 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ011f05F 3', mRNA sequence
Length = 290
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 947 ctggtactggtgaggagga 965
|||||||||||||||||||
Sbjct: 245 ctggtactggtgaggagga 227
>gb|AV559947.1|AV559947 AV559947 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ126c11F 3', mRNA sequence
Length = 317
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1246 tgttgttgaaaattgaaat 1264
|||||||||||||||||||
Sbjct: 60 tgttgttgaaaattgaaat 42
>gb|AV566547.1|AV566547 AV566547 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ245f05F 3', mRNA sequence
Length = 391
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1246 tgttgttgaaaattgaaat 1264
|||||||||||||||||||
Sbjct: 42 tgttgttgaaaattgaaat 24
>gb|BP605726.1|BP605726 BP605726 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-68-A16 3',
mRNA sequence
Length = 415
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 947 ctggtactggtgaggagga 965
|||||||||||||||||||
Sbjct: 263 ctggtactggtgaggagga 245
>gb|AF174429.1|AF174429 Arabidopsis thaliana FH protein interacting protein FIP2 mRNA,
complete cds
Length = 1133
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1246 tgttgttgaaaattgaaat 1264
|||||||||||||||||||
Sbjct: 1067 tgttgttgaaaattgaaat 1085
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 947 ctggtactggtgaggagga 965
|||||||||||||||||||
Sbjct: 1359296 ctggtactggtgaggagga 1359278
>gb|BT004154.1| Arabidopsis thaliana clone RAFL15-45-A08 (R50061) unknown protein
(At1g04830) mRNA, complete cds
Length = 1628
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 947 ctggtactggtgaggagga 965
|||||||||||||||||||
Sbjct: 1350 ctggtactggtgaggagga 1368
>gb|BT004640.1| Arabidopsis thaliana At1g55740 gene, complete cds
Length = 2265
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 519 cgttggggtcgatggtgtc 537
|||||||||||||||||||
Sbjct: 1140 cgttggggtcgatggtgtc 1158
>gb|BT005468.1| Arabidopsis thaliana clone U50061 unknown protein (At1g04830) mRNA,
complete cds
Length = 1378
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 947 ctggtactggtgaggagga 965
|||||||||||||||||||
Sbjct: 1213 ctggtactggtgaggagga 1231
>gb|AC004809.1|F13M7 Arabidopsis thaliana chromosome 1 BAC F13M7 sequence, complete sequence
Length = 89713
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 947 ctggtactggtgaggagga 965
|||||||||||||||||||
Sbjct: 63374 ctggtactggtgaggagga 63392
>gb|AC002328.2|AC002328 Genomic sequence for Arabidopsis thaliana BAC F20N2 from chromosome I,
complete sequence
Length = 109171
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 519 cgttggggtcgatggtgtc 537
|||||||||||||||||||
Sbjct: 75179 cgttggggtcgatggtgtc 75161
>emb|BX833139.1|CNS09Z21 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL35ZH02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1305
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1204 agaaagcggaaaaggcaaa 1222
|||||||||||||||||||
Sbjct: 790 agaaagcggaaaaggcaaa 808
>emb|BX815114.1|CNS0ACRG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS34ZE05 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1586
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 947 ctggtactggtgaggagga 965
|||||||||||||||||||
Sbjct: 1337 ctggtactggtgaggagga 1355
>emb|BX815973.1|CNS0AD0Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH20ZC06 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1574
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 947 ctggtactggtgaggagga 965
|||||||||||||||||||
Sbjct: 1270 ctggtactggtgaggagga 1288
>emb|BX816891.1|CNS0AD0M Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH74ZG12 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1315
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 947 ctggtactggtgaggagga 965
|||||||||||||||||||
Sbjct: 1198 ctggtactggtgaggagga 1216
>dbj|AB017059.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K13P22
Length = 19971
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1246 tgttgttgaaaattgaaat 1264
|||||||||||||||||||
Sbjct: 376 tgttgttgaaaattgaaat 394
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 519 cgttggggtcgatggtgtc 537
|||||||||||||||||||
Sbjct: 5196480 cgttggggtcgatggtgtc 5196462
>ref|NM_104450.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT1G55740 mRNA, complete cds
Length = 2474
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 519 cgttggggtcgatggtgtc 537
|||||||||||||||||||
Sbjct: 1209 cgttggggtcgatggtgtc 1227
>ref|NM_180862.1| Arabidopsis thaliana FIP2; protein binding / voltage-gated potassium
channel AT5G55000 (FIP2) transcript variant AT5G55000.1
mRNA, complete cds
Length = 1266
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1246 tgttgttgaaaattgaaat 1264
|||||||||||||||||||
Sbjct: 1207 tgttgttgaaaattgaaat 1225
>ref|NM_124882.2| Arabidopsis thaliana FIP2; protein binding / voltage-gated potassium
channel AT5G55000 (FIP2) transcript variant AT5G55000.2
mRNA, complete cds
Length = 1126
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1246 tgttgttgaaaattgaaat 1264
|||||||||||||||||||
Sbjct: 1067 tgttgttgaaaattgaaat 1085
>ref|NM_100361.3| Arabidopsis thaliana unknown protein AT1G04830 mRNA, complete cds
Length = 1654
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 947 ctggtactggtgaggagga 965
|||||||||||||||||||
Sbjct: 1350 ctggtactggtgaggagga 1368
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 519 cgttggggtcgatggtgtc 537
|||||||||||||||||||
Sbjct: 20840703 cgttggggtcgatggtgtc 20840685
Score = 38.2 bits (19), Expect = 4.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 947 ctggtactggtgaggagga 965
|||||||||||||||||||
Sbjct: 1359220 ctggtactggtgaggagga 1359202
Database: At_nucl_with_EST.fasta
Posted date: May 2, 2006 2:53 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 672,128
Number of Sequences: 1013581
Number of extensions: 672128
Number of successful extensions: 50195
Number of sequences better than 10.0: 123
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 46916
Number of HSP's gapped (non-prelim): 3248
length of query: 1475
length of database: 908,940,872
effective HSP length: 21
effective length of query: 1454
effective length of database: 887,655,671
effective search space: 1290651345634
effective search space used: 1290651345634
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)