BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805320.2.1
(955 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AA395569.1|AA395569 27366 Lambda-PRL2 Arabidopsis thalia... 76 1e-011
gb|AA395573.1|AA395573 27370 Lambda-PRL2 Arabidopsis thalia... 76 1e-011
gb|AA597431.1|AA597431 29702 Lambda-PRL2 Arabidopsis thalia... 76 1e-011
gb|AA041150.1|AA041150 24416 CD4-13 Arabidopsis thaliana cD... 76 1e-011
gb|AA042294.1|AA042294 24631 CD4-13 Arabidopsis thaliana cD... 76 1e-011
gb|AI998053.1|AI998053 701672845 A. thaliana, Columbia Col-... 76 1e-011
gb|BE038367.1|BE038367 AA12E12 AA Arabidopsis thaliana cDNA... 76 1e-011
gb|AV784440.1|AV784440 AV784440 RAFL5 Arabidopsis thaliana ... 76 1e-011
gb|AV788199.1|AV788199 AV788199 RAFL6 Arabidopsis thaliana ... 76 1e-011
gb|AV790253.1|AV790253 AV790253 RAFL6 Arabidopsis thaliana ... 76 1e-011
gb|AV819260.1|AV819260 AV819260 RAFL11 Arabidopsis thaliana... 76 1e-011
gb|AV823470.1|AV823470 AV823470 RAFL5 Arabidopsis thaliana ... 76 1e-011
gb|CB260674.1|CB260674 77-E9409-012-002-J22-t7r MPIZ-ADIS-0... 76 1e-011
gb|CB264047.1|CB264047 93-E014996-035-003-J24-T7R MPIZ-ADIS... 76 1e-011
gb|CB264472.1|CB264472 59-E014993-035-003-E15-T7R MPIZ-ADIS... 76 1e-011
gb|CB264569.1|CB264569 50-E015024-035-004-D14-T7R MPIZ-ADIS... 76 1e-011
gb|CD532519.1|CD532519 27L22 Arabidopsis Leaf Senescence Li... 76 1e-011
gb|AV440816.1|AV440816 AV440816 Arabidopsis thaliana above-... 76 1e-011
gb|AV442487.1|AV442487 AV442487 Arabidopsis thaliana above-... 76 1e-011
gb|AV522073.1|AV522073 AV522073 Arabidopsis thaliana aboveg... 76 1e-011
gb|CK117828.1|CK117828 209o05.p1 AtM1 Arabidopsis thaliana ... 76 1e-011
gb|CK120495.1|CK120495 218i03.p1 AtM1 Arabidopsis thaliana ... 76 1e-011
gb|CK120859.1|CK120859 205m15.p1 AtM1 Arabidopsis thaliana ... 76 1e-011
gb|BP583959.1|BP583959 BP583959 RAFL14 Arabidopsis thaliana... 76 1e-011
gb|BP590615.1|BP590615 BP590615 RAFL15 Arabidopsis thaliana... 76 1e-011
gb|BP590807.1|BP590807 BP590807 RAFL15 Arabidopsis thaliana... 76 1e-011
gb|BP604146.1|BP604146 BP604146 RAFL16 Arabidopsis thaliana... 76 1e-011
gb|BP613728.1|BP613728 BP613728 RAFL16 Arabidopsis thaliana... 76 1e-011
gb|BP625892.1|BP625892 BP625892 RAFL17 Arabidopsis thaliana... 76 1e-011
gb|BP654385.1|BP654385 BP654385 RAFL19 Arabidopsis thaliana... 76 1e-011
gb|BP656163.1|BP656163 BP656163 RAFL19 Arabidopsis thaliana... 76 1e-011
gb|BP785536.1|BP785536 BP785536 RAFL7 Arabidopsis thaliana ... 76 1e-011
gb|BP789578.1|BP789578 BP789578 RAFL7 Arabidopsis thaliana ... 76 1e-011
gb|U60981.1|ATU60981 Arabidopsis thaliana Skp1p homolog mRN... 76 1e-011
gb|U70034.1|ATU70034 Arabidopsis thaliana homologue to SKP1... 76 1e-011
gb|AF059294.1|AF059294 Arabidopsis thaliana Skp1 homolog (S... 76 1e-011
gb|U97020.1|ATU97020 Arabidopsis thaliana UFO binding prote... 76 1e-011
gb|AF132729.1|AF132729 Arabidopsis thaliana SKP1-like prote... 76 1e-011
gb|AY080884.1| Arabidopsis thaliana putative SKP1/ASK1 prot... 76 1e-011
gb|AY113971.1| Arabidopsis thaliana putative SKP1/ASK1 prot... 76 1e-011
gb|AC007396.6|AC007396 Genomic sequence for Arabidopsis tha... 76 1e-011
emb|BX814497.1|CNS0ACA2 Arabidopsis thaliana Full-length cD... 76 1e-011
emb|BX814213.1|CNS0AEBI Arabidopsis thaliana Full-length cD... 76 1e-011
emb|BX814344.1|CNS0AEA0 Arabidopsis thaliana Full-length cD... 76 1e-011
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 76 1e-011
ref|NM_106245.3| Arabidopsis thaliana SKP1 (ARABIDOPSIS SKP... 76 1e-011
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 76 1e-011
gb|Z33819.1|Z33819 ATTS2910 Versailles-VB Arabidopsis thali... 72 2e-010
gb|T46728.1|T46728 9991 Lambda-PRL2 Arabidopsis thaliana cD... 70 8e-010
gb|BP825321.1|BP825321 BP825321 RAFL19 Arabidopsis thaliana... 68 3e-009
gb|BP838569.1|BP838569 BP838569 RAFL19 Arabidopsis thaliana... 68 3e-009
gb|BP850337.1|BP850337 BP850337 RAFL21 Arabidopsis thaliana... 68 3e-009
emb|BX814298.1|CNS0AEA8 Arabidopsis thaliana Full-length cD... 68 3e-009
gb|AV810388.1|AV810388 AV810388 RAFL9 Arabidopsis thaliana ... 64 5e-008
gb|BP588997.1|BP588997 BP588997 RAFL15 Arabidopsis thaliana... 64 5e-008
gb|Z30088.1|Z30088 ATTS1579 AC16H Arabidopsis thaliana cDNA... 62 2e-007
gb|AA712791.1|AA712791 32350 Lambda-PRL2 Arabidopsis thalia... 62 2e-007
gb|R90504.1|R90504 16859 Lambda-PRL2 Arabidopsis thaliana c... 62 2e-007
gb|BE524603.1|BE524603 M52A12STM Arabidopsis developing see... 62 2e-007
gb|AV551927.1|AV551927 AV551927 Arabidopsis thaliana roots ... 62 2e-007
gb|BP797059.1|BP797059 BP797059 RAFL14 Arabidopsis thaliana... 62 2e-007
gb|BP801363.1|BP801363 BP801363 RAFL14 Arabidopsis thaliana... 62 2e-007
gb|BP803233.1|BP803233 BP803233 RAFL14 Arabidopsis thaliana... 62 2e-007
gb|BP809134.1|BP809134 BP809134 RAFL16 Arabidopsis thaliana... 62 2e-007
gb|BP812292.1|BP812292 BP812292 RAFL19 Arabidopsis thaliana... 62 2e-007
gb|BP812937.1|BP812937 BP812937 RAFL19 Arabidopsis thaliana... 62 2e-007
gb|BP813647.1|BP813647 BP813647 RAFL19 Arabidopsis thaliana... 62 2e-007
gb|BP818388.1|BP818388 BP818388 RAFL19 Arabidopsis thaliana... 62 2e-007
gb|BP820738.1|BP820738 BP820738 RAFL19 Arabidopsis thaliana... 62 2e-007
gb|BP822593.1|BP822593 BP822593 RAFL19 Arabidopsis thaliana... 62 2e-007
gb|BP826289.1|BP826289 BP826289 RAFL19 Arabidopsis thaliana... 62 2e-007
gb|BP833459.1|BP833459 BP833459 RAFL19 Arabidopsis thaliana... 62 2e-007
gb|BP834608.1|BP834608 BP834608 RAFL19 Arabidopsis thaliana... 62 2e-007
gb|BP840324.1|BP840324 BP840324 RAFL19 Arabidopsis thaliana... 62 2e-007
gb|BP851223.1|BP851223 BP851223 RAFL21 Arabidopsis thaliana... 62 2e-007
gb|BP857820.1|BP857820 BP857820 RAFL21 Arabidopsis thaliana... 62 2e-007
gb|BP869108.1|BP869108 BP869108 RAFL21 Arabidopsis thaliana... 62 2e-007
emb|BX814051.1|CNS0AEAP Arabidopsis thaliana Full-length cD... 62 2e-007
gb|AV790187.1|AV790187 AV790187 RAFL6 Arabidopsis thaliana ... 60 7e-007
gb|BP635207.1|BP635207 BP635207 RAFL17 Arabidopsis thaliana... 60 7e-007
gb|BP854823.1|BP854823 BP854823 RAFL21 Arabidopsis thaliana... 60 7e-007
gb|BH611721.1|BH611721 SALK_031601 Arabidopsis thaliana TDN... 58 3e-006
gb|BZ286981.1|BZ286981 SALK_020330.55.75.x Arabidopsis thal... 58 3e-006
gb|BP647114.1|BP647114 BP647114 RAFL19 Arabidopsis thaliana... 58 3e-006
emb|AL773145.1| Arabidopsis thaliana transposon insertion S... 58 3e-006
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 58 3e-006
emb|AL035521.1|ATF10M10 Arabidopsis thaliana DNA chromosome... 58 3e-006
emb|AL023094.2|ATT4L20 Arabidopsis thaliana DNA chromosome ... 58 3e-006
emb|AL021961.2|ATF28A23 Arabidopsis thaliana DNA chromosome... 58 3e-006
emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosom... 58 3e-006
ref|NM_119584.1| Arabidopsis thaliana ASK11 (ARABIDOPSIS SK... 58 3e-006
ref|NM_119612.1| Arabidopsis thaliana ASK12; protein bindin... 58 3e-006
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 58 3e-006
emb|BX662544.1| Arabidopsis thaliana T-DNA flanking sequenc... 56 1e-005
gb|AY200437.1|AY200437 AY200437 Arabidopsis thaliana Landsb... 56 1e-005
gb|N37394.1|N37394 18621 Lambda-PRL2 Arabidopsis thaliana c... 56 1e-005
gb|R65040.1|R65040 13544 Lambda-PRL2 Arabidopsis thaliana c... 56 1e-005
gb|T46664.1|T46664 9927 Lambda-PRL2 Arabidopsis thaliana cD... 56 1e-005
gb|BP820372.1|BP820372 BP820372 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BP829835.1|BP829835 BP829835 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BP831421.1|BP831421 BP831421 RAFL19 Arabidopsis thaliana... 56 1e-005
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 56 1e-005
emb|AL138647.1|ATF24G16 Arabidopsis thaliana DNA chromosome... 56 1e-005
emb|AL138658.1|ATT2O9 Arabidopsis thaliana DNA chromosome 3... 56 1e-005
ref|NM_115864.1| Arabidopsis thaliana ASK13; protein bindin... 56 1e-005
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 56 1e-005
gb|AV797026.1|AV797026 AV797026 RAFL9 Arabidopsis thaliana ... 54 5e-005
gb|AV827010.1|AV827010 AV827010 RAFL9 Arabidopsis thaliana ... 54 5e-005
gb|BP814459.1|BP814459 BP814459 RAFL19 Arabidopsis thaliana... 54 5e-005
gb|BP817499.1|BP817499 BP817499 RAFL19 Arabidopsis thaliana... 54 5e-005
gb|BP830609.1|BP830609 BP830609 RAFL19 Arabidopsis thaliana... 54 5e-005
gb|BP840968.1|BP840968 BP840968 RAFL19 Arabidopsis thaliana... 54 5e-005
gb|BP852361.1|BP852361 BP852361 RAFL21 Arabidopsis thaliana... 54 5e-005
gb|AY058205.1| Arabidopsis thaliana At1g20140/T20H2_8 mRNA,... 54 5e-005
gb|AY098980.1| Arabidopsis thaliana At1g20140/T20H2_8 mRNA,... 54 5e-005
emb|BX818214.1|CNS0AB2X Arabidopsis thaliana Full-length cD... 54 5e-005
emb|BX817718.1|CNS0AE5H Arabidopsis thaliana Full-length cD... 54 5e-005
ref|NM_101868.3| Arabidopsis thaliana ASK4; ubiquitin-prote... 54 5e-005
gb|AQ251269.1|AQ251269 F19P21-T7 IGF Arabidopsis thaliana g... 52 2e-004
gb|H37059.1|H37059 15188 Lambda-PRL2 Arabidopsis thaliana c... 52 2e-004
gb|N37534.1|N37534 18761 Lambda-PRL2 Arabidopsis thaliana c... 52 2e-004
gb|T43521.1|T43521 6784 Lambda-PRL2 Arabidopsis thaliana cD... 52 2e-004
gb|BP640153.1|BP640153 BP640153 RAFL19 Arabidopsis thaliana... 52 2e-004
gb|BP822452.1|BP822452 BP822452 RAFL19 Arabidopsis thaliana... 52 2e-004
gb|Z30902.1|Z30902 ATTS2655 Versailles-VB Arabidopsis thali... 50 7e-004
gb|T88438.1|T88438 12134 Lambda-PRL2 Arabidopsis thaliana c... 50 7e-004
gb|R30009.1|R30009 12614 Lambda-PRL2 Arabidopsis thaliana c... 50 7e-004
gb|BP805151.1|BP805151 BP805151 RAFL16 Arabidopsis thaliana... 50 7e-004
gb|BH789939.1|BH789939 SALK_052841.30.20.x Arabidopsis thal... 46 0.011
gb|T76658.1|T76658 11436 Lambda-PRL2 Arabidopsis thaliana c... 46 0.011
gb|BP818406.1|BP818406 BP818406 RAFL19 Arabidopsis thaliana... 46 0.011
gb|AQ251358.1|AQ251358 F25I20-T7 IGF Arabidopsis thaliana g... 44 0.044
gb|BP823033.1|BP823033 BP823033 RAFL19 Arabidopsis thaliana... 44 0.044
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 44 0.044
gb|AC022472.2|T20H2 Sequence of BAC T20H2 from Arabidopsis ... 44 0.044
gb|B23999.1|B23999 F18B24TF IGF Arabidopsis thaliana genomi... 42 0.17
gb|AY199591.1|AY199591 AY199591 Arabidopsis thaliana Landsb... 42 0.17
gb|T45102.1|T45102 8365 Lambda-PRL2 Arabidopsis thaliana cD... 42 0.17
gb|AV787189.1|AV787189 AV787189 RAFL6 Arabidopsis thaliana ... 42 0.17
gb|AV824667.1|AV824667 AV824667 RAFL6 Arabidopsis thaliana ... 42 0.17
gb|BX841469.1|BX841469 BX841469 Arabidopsis thaliana Siliqu... 42 0.17
gb|AY052700.1| Arabidopsis thaliana At2g25700/F3N11.15 mRNA... 42 0.17
gb|AY139806.1| Arabidopsis thaliana At2g25700/F3N11.15 mRNA... 42 0.17
gb|AC006053.3| Arabidopsis thaliana chromosome 2 clone F3N1... 42 0.17
dbj|AB025634.1| Arabidopsis thaliana genomic DNA, chromosom... 42 0.17
gb|DQ056601.1| Arabidopsis thaliana putative E3 ubiquitin l... 42 0.17
gb|DQ056602.1| Arabidopsis thaliana E3 ubiquitin ligase SCF... 42 0.17
ref|NM_113078.1| Arabidopsis thaliana ASK8; ubiquitin-prote... 42 0.17
ref|NM_113080.1| Arabidopsis thaliana ASK9 (ARABIDOPSIS SKP... 42 0.17
ref|NM_113081.1| Arabidopsis thaliana ASK10; ubiquitin-prot... 42 0.17
ref|NM_128129.2| Arabidopsis thaliana ASK3; protein binding... 42 0.17
ref|NM_113079.2| Arabidopsis thaliana ASK7; ubiquitin-prote... 42 0.17
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 42 0.17
>gb|AA395569.1|AA395569 27366 Lambda-PRL2 Arabidopsis thaliana cDNA clone 317C9T7 5', mRNA
sequence
Length = 367
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 128 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 69
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 68 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 9
Query: 467 ca 468
||
Sbjct: 8 ca 7
>gb|AA395573.1|AA395573 27370 Lambda-PRL2 Arabidopsis thaliana cDNA clone 317E9T7 5', mRNA
sequence
Length = 368
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 128 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 69
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 68 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 9
Query: 467 ca 468
||
Sbjct: 8 ca 7
>gb|AA597431.1|AA597431 29702 Lambda-PRL2 Arabidopsis thaliana cDNA clone 198F20T7, mRNA
sequence
Length = 367
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 128 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 69
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 68 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 9
Query: 467 ca 468
||
Sbjct: 8 ca 7
>gb|AA041150.1|AA041150 24416 CD4-13 Arabidopsis thaliana cDNA clone E2C2T7, mRNA sequence
Length = 587
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 208 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 267
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 268 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 327
Query: 467 ca 468
||
Sbjct: 328 ca 329
>gb|AA042294.1|AA042294 24631 CD4-13 Arabidopsis thaliana cDNA clone E6B10T7, mRNA sequence
Length = 600
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 182 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 241
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 242 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 301
Query: 467 ca 468
||
Sbjct: 302 ca 303
>gb|AI998053.1|AI998053 701672845 A. thaliana, Columbia Col-0, rosette-1 Arabidopsis
thaliana cDNA clone 701672845, mRNA sequence
Length = 586
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 239 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 298
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 299 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 358
Query: 467 ca 468
||
Sbjct: 359 ca 360
>gb|BE038367.1|BE038367 AA12E12 AA Arabidopsis thaliana cDNA 5', mRNA sequence
Length = 718
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 550 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 491
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 490 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 431
Query: 467 ca 468
||
Sbjct: 430 ca 429
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 265 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 206
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 205 gggactccgttgtcgacgcagtc 183
>gb|AV784440.1|AV784440 AV784440 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-19-H20 3',
mRNA sequence
Length = 693
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 207 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 266
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 267 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 326
Query: 467 ca 468
||
Sbjct: 327 ca 328
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 492 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 551
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 552 gggactccgttgtcgacgcagtc 574
>gb|AV788199.1|AV788199 AV788199 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-78-I08 3',
mRNA sequence
Length = 420
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 176 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 235
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 236 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 295
Query: 467 ca 468
||
Sbjct: 296 ca 297
>gb|AV790253.1|AV790253 AV790253 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-87-K06 3',
mRNA sequence
Length = 411
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 240 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 299
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 300 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 359
Query: 467 ca 468
||
Sbjct: 360 ca 361
>gb|AV819260.1|AV819260 AV819260 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-03-D18 3',
mRNA sequence
Length = 436
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 204 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 263
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 264 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 323
Query: 467 ca 468
||
Sbjct: 324 ca 325
>gb|AV823470.1|AV823470 AV823470 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-19-H20 5',
mRNA sequence
Length = 664
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 532 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 473
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 472 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 413
Query: 467 ca 468
||
Sbjct: 412 ca 411
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 247 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 188
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 187 gggactccgttgtcgacgcagtc 165
>gb|CB260674.1|CB260674 77-E9409-012-002-J22-t7r MPIZ-ADIS-012 Arabidopsis thaliana cDNA
clone MPIZp769J222Q 5-PRIME, mRNA sequence
Length = 669
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 540 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 481
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 480 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 421
Query: 467 ca 468
||
Sbjct: 420 ca 419
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 255 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 196
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 195 gggactccgttgtcgacgcagtc 173
>gb|CB264047.1|CB264047 93-E014996-035-003-J24-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000J243Q 5-PRIME, mRNA sequence
Length = 646
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 515 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 456
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 455 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 396
Query: 467 ca 468
||
Sbjct: 395 ca 394
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 230 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 171
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 170 gggactccgttgtcgacgcagtc 148
>gb|CB264472.1|CB264472 59-E014993-035-003-E15-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000E153Q 5-PRIME, mRNA sequence
Length = 672
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 541 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 482
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 481 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 422
Query: 467 ca 468
||
Sbjct: 421 ca 420
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 256 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 197
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 196 gggactccgttgtcgacgcagtc 174
>gb|CB264569.1|CB264569 50-E015024-035-004-D14-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000D144Q 5-PRIME, mRNA sequence
Length = 736
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 540 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 481
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 480 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 421
Query: 467 ca 468
||
Sbjct: 420 ca 419
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 255 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 196
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 195 gggactccgttgtcgacgcagtc 173
>gb|CD532519.1|CD532519 27L22 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 405
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 241 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 300
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 301 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 360
Query: 467 ca 468
||
Sbjct: 361 ca 362
>gb|AV440816.1|AV440816 AV440816 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APZ10e01_f 3', mRNA
sequence
Length = 395
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 172 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 231
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 232 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 291
Query: 467 ca 468
||
Sbjct: 292 ca 293
>gb|AV442487.1|AV442487 AV442487 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APZ10e01_r 5', mRNA
sequence
Length = 582
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 523 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 464
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 463 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 404
Query: 467 ca 468
||
Sbjct: 403 ca 402
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 238 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 179
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 178 gggactccgttgtcgacgcagtc 156
>gb|AV522073.1|AV522073 AV522073 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ72b01F 3', mRNA
sequence
Length = 309
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 176 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 235
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 236 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 295
Query: 467 ca 468
||
Sbjct: 296 ca 297
>gb|CK117828.1|CK117828 209o05.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011O05209
5-PRIME, mRNA sequence
Length = 609
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 478 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 419
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 418 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 359
Query: 467 ca 468
||
Sbjct: 358 ca 357
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 193 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 134
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 133 gggactccgttgtcgacgcagtc 111
>gb|CK120495.1|CK120495 218i03.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011I03218
5-PRIME, mRNA sequence
Length = 753
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 529 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 470
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 469 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 410
Query: 467 ca 468
||
Sbjct: 409 ca 408
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 244 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 185
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 184 gggactccgttgtcgacgcagtc 162
>gb|CK120859.1|CK120859 205m15.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011M15205
5-PRIME, mRNA sequence
Length = 609
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 478 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 419
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 418 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 359
Query: 467 ca 468
||
Sbjct: 358 ca 357
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 193 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 134
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 133 gggactccgttgtcgacgcagtc 111
>gb|BP583959.1|BP583959 BP583959 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-44-E03 3',
mRNA sequence
Length = 425
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 207 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 266
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 267 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 326
Query: 467 ca 468
||
Sbjct: 327 ca 328
>gb|BP590615.1|BP590615 BP590615 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-11-H09 3',
mRNA sequence
Length = 448
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 207 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 266
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 267 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 326
Query: 467 ca 468
||
Sbjct: 327 ca 328
>gb|BP590807.1|BP590807 BP590807 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-12-C20 3',
mRNA sequence
Length = 413
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 243 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 302
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 303 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 362
Query: 467 ca 468
||
Sbjct: 363 ca 364
>gb|BP604146.1|BP604146 BP604146 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-61-H13 3',
mRNA sequence
Length = 401
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 258 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 317
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 318 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 377
Query: 467 ca 468
||
Sbjct: 378 ca 379
>gb|BP613728.1|BP613728 BP613728 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-94-C08 3',
mRNA sequence
Length = 432
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 212 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 271
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 272 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 331
Query: 467 ca 468
||
Sbjct: 332 ca 333
>gb|BP625892.1|BP625892 BP625892 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-45-H13 3',
mRNA sequence
Length = 432
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 207 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 266
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 267 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 326
Query: 467 ca 468
||
Sbjct: 327 ca 328
>gb|BP654385.1|BP654385 BP654385 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-17-G21 3',
mRNA sequence
Length = 390
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 209 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 268
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 269 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 328
Query: 467 ca 468
||
Sbjct: 329 ca 330
>gb|BP656163.1|BP656163 BP656163 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-24-M22 3',
mRNA sequence
Length = 430
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 240 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 299
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 300 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 359
Query: 467 ca 468
||
Sbjct: 360 ca 361
>gb|BP785536.1|BP785536 BP785536 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-95-E20 3',
mRNA sequence
Length = 411
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 207 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 266
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 267 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 326
Query: 467 ca 468
||
Sbjct: 327 ca 328
>gb|BP789578.1|BP789578 BP789578 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-39-K05 3',
mRNA sequence
Length = 412
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 207 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 266
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 267 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 326
Query: 467 ca 468
||
Sbjct: 327 ca 328
>gb|U60981.1|ATU60981 Arabidopsis thaliana Skp1p homolog mRNA, complete cds
Length = 769
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 522 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 463
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 462 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 403
Query: 467 ca 468
||
Sbjct: 402 ca 401
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 237 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 178
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 177 gggactccgttgtcgacgcagtc 155
>gb|U70034.1|ATU70034 Arabidopsis thaliana homologue to SKP1 (ATskp1) mRNA, complete cds
Length = 656
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 462 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 403
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 402 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 343
Query: 467 ca 468
||
Sbjct: 342 ca 341
Score = 54.0 bits (27), Expect = 5e-005
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 177 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 118
Query: 728 gggatgccgttgtcggcgcagtc 750
||| ||||||||| |||||||
Sbjct: 117 aggactccgttgtcgacgcagtc 95
>gb|AF059294.1|AF059294 Arabidopsis thaliana Skp1 homolog (SKP1a) mRNA, complete cds
Length = 806
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 538 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 479
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 478 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 419
Query: 467 ca 468
||
Sbjct: 418 ca 417
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 253 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 194
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 193 gggactccgttgtcgacgcagtc 171
>gb|U97020.1|ATU97020 Arabidopsis thaliana UFO binding protein UIP1 mRNA, complete cds
Length = 797
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 542 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 483
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 482 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 423
Query: 467 ca 468
||
Sbjct: 422 ca 421
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 257 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 198
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 197 gggactccgttgtcgacgcagtc 175
>gb|AF132729.1|AF132729 Arabidopsis thaliana SKP1-like protein ASK10 (ASK10) mRNA, partial
cds
Length = 688
Score = 75.8 bits (38), Expect = 1e-011
Identities = 161/202 (79%)
Strand = Plus / Minus
Query: 364 gcggatctcctcttcctcctcaggggtgaagtcattcttgatgttgaaggtcttgcgaat 423
|||||||| ||| || ||||| || ||||| ||||||||||||||||| || ||| ||
Sbjct: 474 gcggatctgctcctcttcctcgggagtgaaatcattcttgatgttgaaagttcggcgtat 415
Query: 424 ctcttctggtgtcttgcccttgatcatgtcagcaacagtctgacaggtcaggtcgagcag 483
||| || || ||||||||||||||||||| || || |||| ||||| | || || ||
Sbjct: 414 ctcctcgggagtcttgcccttgatcatgttggctacggtcttgcaggtgacatcaagaag 355
Query: 484 acccttgatgttcagatagtttgcagccaagatgaggtcgaaaagcgtggcctggtcgac 543
|||||| |||| || ||||| || |||| ||| || ||||| ||||| ||||||||||
Sbjct: 354 acccttaatgtcgaggtagttggcggccaggatcagctcgaatagcgtcccctggtcgac 295
Query: 544 cttgacgaagtccgcatcccag 565
||| | ||| ||| ||||||||
Sbjct: 294 cttcaagaactccacatcccag 273
>gb|AY080884.1| Arabidopsis thaliana putative SKP1/ASK1 protein At1 (At1g75950)
mRNA, complete cds
Length = 758
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 533 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 474
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 473 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 414
Query: 467 ca 468
||
Sbjct: 413 ca 412
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 248 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 189
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 188 gggactccgttgtcgacgcagtc 166
>gb|AY113971.1| Arabidopsis thaliana putative SKP1/ASK1 protein At1 (At1g75950)
mRNA, complete cds
Length = 514
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 473 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 414
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 413 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 354
Query: 467 ca 468
||
Sbjct: 353 ca 352
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 188 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 129
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 128 gggactccgttgtcgacgcagtc 106
>gb|AC007396.6|AC007396 Genomic sequence for Arabidopsis thaliana BAC T4O12 from chromosome I,
complete sequence
Length = 95870
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 66515 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 66456
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 66455 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 66396
Query: 467 ca 468
||
Sbjct: 66395 ca 66394
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 65973 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 65914
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 65913 gggactccgttgtcgacgcagtc 65891
>emb|BX814497.1|CNS0ACA2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB77ZB10 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 708
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 463 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 404
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 403 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 344
Query: 467 ca 468
||
Sbjct: 343 ca 342
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 178 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 119
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 118 gggactccgttgtcgacgcagtc 96
>emb|BX814213.1|CNS0AEBI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB61ZB04 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 674
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 451 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 392
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 391 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 332
Query: 467 ca 468
||
Sbjct: 331 ca 330
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 166 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 107
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 106 gggactccgttgtcgacgcagtc 84
>emb|BX814344.1|CNS0AEA0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB69ZD08 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 803
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 591 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 532
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 531 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 472
Query: 467 ca 468
||
Sbjct: 471 ca 470
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 306 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 247
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 246 gggactccgttgtcgacgcagtc 224
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 12758763 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 12758704
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 12758703 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 12758644
Query: 467 ca 468
||
Sbjct: 12758643 ca 12758642
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 12758221 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 12758162
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 12758161 gggactccgttgtcgacgcagtc 12758139
>ref|NM_106245.3| Arabidopsis thaliana SKP1 (ARABIDOPSIS SKP1 HOMOLOGUE);
ubiquitin-protein ligase AT1G75950 (SKP1) mRNA, complete
cds
Length = 846
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 591 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 532
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 531 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 472
Query: 467 ca 468
||
Sbjct: 471 ca 470
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 306 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 247
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 246 gggactccgttgtcgacgcagtc 224
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 75.8 bits (38), Expect = 1e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 28521105 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 28521046
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 28521045 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 28520986
Query: 467 ca 468
||
Sbjct: 28520985 ca 28520984
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||| | ||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 28520563 acgtgcctcttgcaatactcgatcaccttggcgaggatcttgctcgtgacgttaggaaga 28520504
Query: 728 gggatgccgttgtcggcgcagtc 750
|||| ||||||||| |||||||
Sbjct: 28520503 gggactccgttgtcgacgcagtc 28520481
Score = 44.1 bits (22), Expect = 0.044
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 339 actcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcat 398
||||||| ||||||| |||||| |||| | |||| | || |||||||| ||| | || |
Sbjct: 6987068 actcgaacgcccacttgttctcattgcgaacctccgcctcttcctcaggtgtgtaatcgt 6987009
Query: 399 tcttgatgttgaag 412
||||||||||||||
Sbjct: 6987008 tcttgatgttgaag 6986995
>gb|Z33819.1|Z33819 ATTS2910 Versailles-VB Arabidopsis thaliana cDNA clone VBVYF07,
mRNA sequence
Length = 298
Score = 71.9 bits (36), Expect = 2e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 167 gcccattggttctctctgcgaacctcttcctcttcctcnggtgtgaagtcgttcttaatg 226
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || ||| ||||||||||| ||||| || |||||||| || ||||| ||||||
Sbjct: 227 ttgaacgttgngcggatctcttctggagtctttcctttgatcatatccgcaactgtctga 286
Query: 467 ca 468
||
Sbjct: 287 ca 288
>gb|T46728.1|T46728 9991 Lambda-PRL2 Arabidopsis thaliana cDNA clone 141J8T7, mRNA
sequence
Length = 369
Score = 69.9 bits (35), Expect = 8e-010
Identities = 100/122 (81%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 126 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 67
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || ||||| || || ||||| ||||||
Sbjct: 66 ttgaacgttgtgcggatctcttctggagtctttcctttgatnatatccgcaactgtctga 7
Query: 467 ca 468
||
Sbjct: 6 ca 5
>gb|BP825321.1|BP825321 BP825321 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-68-D08 5',
mRNA sequence
Length = 384
Score = 67.9 bits (34), Expect = 3e-009
Identities = 100/122 (81%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||| ||||| | ||| || || ||||| || |||||||| ||||| |||
Sbjct: 244 gcccattggttctctctgcgaacctcttcctcttcctctggtgtgaagtcgttcttaatg 185
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
||||| || |||| ||||||||||| ||||| || |||||||| || ||||| |||||
Sbjct: 184 ttgaacgttgtgcggatctcttctggagtctttcctttgatcatatccgcaactttctga 125
Query: 467 ca 468
||
Sbjct: 124 ca 123
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 436,748
Number of Sequences: 1013581
Number of extensions: 436748
Number of successful extensions: 36233
Number of sequences better than 0.5: 153
Number of HSP's better than 0.5 without gapping: 147
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 34109
Number of HSP's gapped (non-prelim): 2132
length of query: 955
length of database: 908,940,872
effective HSP length: 20
effective length of query: 935
effective length of database: 888,669,252
effective search space: 830905750620
effective search space used: 830905750620
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)