BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804918.2.5
(733 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|W43275.1|W43275 22654 Lambda-PRL2 Arabidopsis thaliana c... 105 1e-020
gb|BE038784.1|BE038784 AB06G11 AB Arabidopsis thaliana cDNA... 105 1e-020
gb|AV824600.1|AV824600 AV824600 RAFL6 Arabidopsis thaliana ... 105 1e-020
gb|AV537468.1|AV537468 AV537468 Arabidopsis thaliana roots ... 105 1e-020
gb|AV549360.1|AV549360 AV549360 Arabidopsis thaliana roots ... 105 1e-020
gb|AV565172.1|AV565172 AV565172 Arabidopsis thaliana green ... 105 1e-020
gb|CK117662.1|CK117662 214j08.p1 AtM1 Arabidopsis thaliana ... 105 1e-020
gb|CK117738.1|CK117738 213p15.p1 AtM1 Arabidopsis thaliana ... 105 1e-020
gb|CK117746.1|CK117746 214c16.p1 AtM1 Arabidopsis thaliana ... 105 1e-020
gb|CK118518.1|CK118518 216n18.p1 AtM1 Arabidopsis thaliana ... 105 1e-020
gb|CK118659.1|CK118659 216g13.p1 AtM1 Arabidopsis thaliana ... 105 1e-020
gb|CK118670.1|CK118670 216h01.p1 AtM1 Arabidopsis thaliana ... 105 1e-020
gb|CK119105.1|CK119105 214h02.p1 AtM1 Arabidopsis thaliana ... 105 1e-020
gb|CK119590.1|CK119590 211j12.p1 AtM1 Arabidopsis thaliana ... 105 1e-020
gb|CK120530.1|CK120530 207d10.p1 AtM1 Arabidopsis thaliana ... 105 1e-020
gb|CK120531.1|CK120531 207d12.p1 AtM1 Arabidopsis thaliana ... 105 1e-020
gb|BP561242.2|BP561242 BP561242 RAFL6 Arabidopsis thaliana ... 105 1e-020
gb|BP818703.1|BP818703 BP818703 RAFL19 Arabidopsis thaliana... 105 1e-020
gb|BP818831.1|BP818831 BP818831 RAFL19 Arabidopsis thaliana... 105 1e-020
gb|BP823866.1|BP823866 BP823866 RAFL19 Arabidopsis thaliana... 105 1e-020
gb|BP839073.1|BP839073 BP839073 RAFL19 Arabidopsis thaliana... 105 1e-020
emb|AX364110.1| Sequence 117 from Patent WO0208410 105 1e-020
emb|AX366192.1| Sequence 111 from Patent WO0208411 105 1e-020
gb|AY140102.1| Arabidopsis thaliana 60S ribosomal protein L... 105 1e-020
gb|BT002590.1| Arabidopsis thaliana 60S ribosomal protein L... 105 1e-020
emb|AJ834880.1| Arabidopsis thaliana T-DNA flanking sequenc... 105 1e-020
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 105 1e-020
emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome ... 105 1e-020
ref|NM_115203.2| Arabidopsis thaliana structural constituen... 105 1e-020
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 105 1e-020
gb|AV828348.1|AV828348 AV828348 RAFL9 Arabidopsis thaliana ... 103 4e-020
gb|BP830175.1|BP830175 BP830175 RAFL19 Arabidopsis thaliana... 103 4e-020
gb|BP820302.1|BP820302 BP820302 RAFL19 Arabidopsis thaliana... 101 2e-019
emb|BX822885.1|CNS0A73Z Arabidopsis thaliana Full-length cD... 98 3e-018
gb|BP812809.1|BP812809 BP812809 RAFL19 Arabidopsis thaliana... 96 1e-017
gb|BP862130.1|BP862130 BP862130 RAFL21 Arabidopsis thaliana... 96 1e-017
gb|BP827852.1|BP827852 BP827852 RAFL19 Arabidopsis thaliana... 92 2e-016
gb|BP827663.1|BP827663 BP827663 RAFL19 Arabidopsis thaliana... 90 6e-016
gb|BP864359.1|BP864359 BP864359 RAFL21 Arabidopsis thaliana... 90 6e-016
gb|BP831022.1|BP831022 BP831022 RAFL19 Arabidopsis thaliana... 88 2e-015
gb|BP868774.1|BP868774 BP868774 RAFL21 Arabidopsis thaliana... 88 2e-015
gb|AV525598.1|AV525598 AV525598 Arabidopsis thaliana aboveg... 86 1e-014
gb|BP801717.1|BP801717 BP801717 RAFL14 Arabidopsis thaliana... 82 2e-013
emb|BX825878.1|CNS0A66S Arabidopsis thaliana Full-length cD... 82 2e-013
gb|AV552325.1|AV552325 AV552325 Arabidopsis thaliana roots ... 80 6e-013
gb|BP850158.1|BP850158 BP850158 RAFL21 Arabidopsis thaliana... 80 6e-013
gb|CL501003.1|CL501003 SAIL_691_D11.v1 SAIL Collection Arab... 78 2e-012
gb|T88600.1|T88600 12296 Lambda-PRL2 Arabidopsis thaliana c... 78 2e-012
gb|AV782949.1|AV782949 AV782949 RAFL5 Arabidopsis thaliana ... 78 2e-012
gb|AV530701.1|AV530701 AV530701 Arabidopsis thaliana flower... 78 2e-012
gb|BP803702.1|BP803702 BP803702 RAFL14 Arabidopsis thaliana... 78 2e-012
gb|BP867222.1|BP867222 BP867222 RAFL21 Arabidopsis thaliana... 78 2e-012
gb|AY039614.1| Arabidopsis thaliana AT5g60670/mup24_80 mRNA... 78 2e-012
gb|AY078025.1| Arabidopsis thaliana AT5g60670/mup24_80 mRNA... 78 2e-012
gb|AY088164.1| Arabidopsis thaliana clone 42276 mRNA, compl... 78 2e-012
dbj|AB005246.1| Arabidopsis thaliana genomic DNA, chromosom... 78 2e-012
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 78 2e-012
ref|NM_125460.2| Arabidopsis thaliana structural constituen... 78 2e-012
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 78 2e-012
gb|Z47613.1|Z47613 ATTS4469 AC16H Arabidopsis thaliana cDNA... 76 9e-012
gb|AI998344.1|AI998344 701545326 A. thaliana, Columbia Col-... 76 9e-012
gb|BP836349.1|BP836349 BP836349 RAFL19 Arabidopsis thaliana... 76 9e-012
gb|BP802567.1|BP802567 BP802567 RAFL14 Arabidopsis thaliana... 72 1e-010
gb|BP805963.1|BP805963 BP805963 RAFL16 Arabidopsis thaliana... 72 1e-010
gb|N37629.1|N37629 18856 Lambda-PRL2 Arabidopsis thaliana c... 70 6e-010
gb|AA728722.1|AA728722 33776 CD4-6 Arabidopsis thaliana cDN... 70 6e-010
gb|AV786322.1|AV786322 AV786322 RAFL6 Arabidopsis thaliana ... 70 6e-010
gb|AV801143.1|AV801143 AV801143 RAFL9 Arabidopsis thaliana ... 70 6e-010
gb|AV555547.1|AV555547 AV555547 Arabidopsis thaliana green ... 70 6e-010
gb|BP575630.1|BP575630 BP575630 RAFL14 Arabidopsis thaliana... 70 6e-010
gb|BP630497.1|BP630497 BP630497 RAFL17 Arabidopsis thaliana... 70 6e-010
gb|BP640783.1|BP640783 BP640783 RAFL19 Arabidopsis thaliana... 70 6e-010
gb|BP572118.1|BP572118 BP572118 RAFL14 Arabidopsis thaliana... 68 2e-009
gb|BP831396.1|BP831396 BP831396 RAFL19 Arabidopsis thaliana... 68 2e-009
gb|AV822246.1|AV822246 AV822246 RAFL5 Arabidopsis thaliana ... 66 9e-009
gb|BP820962.1|BP820962 BP820962 RAFL19 Arabidopsis thaliana... 66 9e-009
gb|BP566673.1|BP566673 BP566673 RAFL14 Arabidopsis thaliana... 64 4e-008
gb|BP644681.1|BP644681 BP644681 RAFL19 Arabidopsis thaliana... 64 4e-008
gb|BP799038.1|BP799038 BP799038 RAFL14 Arabidopsis thaliana... 64 4e-008
gb|BP816126.1|BP816126 BP816126 RAFL19 Arabidopsis thaliana... 64 4e-008
gb|N37628.1|N37628 18855 Lambda-PRL2 Arabidopsis thaliana c... 62 1e-007
gb|BP591871.1|BP591871 BP591871 RAFL15 Arabidopsis thaliana... 62 1e-007
gb|BP641539.1|BP641539 BP641539 RAFL19 Arabidopsis thaliana... 62 1e-007
gb|BP642097.1|BP642097 BP642097 RAFL19 Arabidopsis thaliana... 62 1e-007
gb|BP827993.1|BP827993 BP827993 RAFL19 Arabidopsis thaliana... 62 1e-007
gb|AV831978.1|AV831978 AV831978 RAFL9 Arabidopsis thaliana ... 60 6e-007
gb|BP640306.1|BP640306 BP640306 RAFL19 Arabidopsis thaliana... 60 6e-007
gb|BP816103.1|BP816103 BP816103 RAFL19 Arabidopsis thaliana... 60 6e-007
gb|BP819055.1|BP819055 BP819055 RAFL19 Arabidopsis thaliana... 60 6e-007
gb|BP827726.1|BP827726 BP827726 RAFL19 Arabidopsis thaliana... 60 6e-007
gb|BP829017.1|BP829017 BP829017 RAFL19 Arabidopsis thaliana... 60 6e-007
gb|BP819320.1|BP819320 BP819320 RAFL19 Arabidopsis thaliana... 58 2e-006
gb|N38246.1|N38246 19473 Lambda-PRL2 Arabidopsis thaliana c... 56 9e-006
gb|AV828159.1|AV828159 AV828159 RAFL9 Arabidopsis thaliana ... 56 9e-006
gb|AV540047.1|AV540047 AV540047 Arabidopsis thaliana roots ... 56 9e-006
gb|AV553827.1|AV553827 AV553827 Arabidopsis thaliana roots ... 56 9e-006
gb|CK118296.1|CK118296 217l15.p1 AtM1 Arabidopsis thaliana ... 56 9e-006
gb|CK121955.1|CK121955 212b01.p1 AtM1 Arabidopsis thaliana ... 56 9e-006
gb|BP634351.1|BP634351 BP634351 RAFL17 Arabidopsis thaliana... 56 9e-006
gb|CB253816.1|CB253816 87-E010696-019-002-M21-T7R MPIZ-ADIS... 56 9e-006
gb|BP812816.1|BP812816 BP812816 RAFL19 Arabidopsis thaliana... 56 9e-006
gb|BP816375.1|BP816375 BP816375 RAFL19 Arabidopsis thaliana... 56 9e-006
gb|BP831853.1|BP831853 BP831853 RAFL19 Arabidopsis thaliana... 56 9e-006
gb|BP839309.1|BP839309 BP839309 RAFL19 Arabidopsis thaliana... 56 9e-006
gb|BP843350.1|BP843350 BP843350 RAFL21 Arabidopsis thaliana... 56 9e-006
gb|AF372896.1|AF372896 Arabidopsis thaliana At2g37190/T2N18... 56 9e-006
emb|AX506057.1| Sequence 752 from Patent WO0216655 56 9e-006
gb|BT002673.1| Arabidopsis thaliana At2g37190/T2N18.5 gene,... 56 9e-006
gb|AY086293.1| Arabidopsis thaliana clone 23523 mRNA, compl... 56 9e-006
gb|AC006260.4| Arabidopsis thaliana chromosome 2 clone T2N1... 56 9e-006
emb|BX821140.1|CNS0A930 Arabidopsis thaliana Full-length cD... 56 9e-006
emb|BX821658.1|CNS0A97C Arabidopsis thaliana Full-length cD... 56 9e-006
emb|BX820943.1|CNS0A9IM Arabidopsis thaliana Full-length cD... 56 9e-006
emb|BX819500.1|CNS0AADZ Arabidopsis thaliana Full-length cD... 56 9e-006
ref|NM_129275.2| Arabidopsis thaliana structural constituen... 56 9e-006
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 56 9e-006
gb|AI996578.1|AI996578 701667522 A. thaliana, Columbia Col-... 54 3e-005
gb|AV788840.1|AV788840 AV788840 RAFL6 Arabidopsis thaliana ... 54 3e-005
gb|BP571638.1|BP571638 BP571638 RAFL14 Arabidopsis thaliana... 54 3e-005
gb|BP587623.1|BP587623 BP587623 RAFL15 Arabidopsis thaliana... 54 3e-005
gb|BP600035.1|BP600035 BP600035 RAFL16 Arabidopsis thaliana... 54 3e-005
gb|BP626539.1|BP626539 BP626539 RAFL17 Arabidopsis thaliana... 54 3e-005
gb|BP648551.1|BP648551 BP648551 RAFL19 Arabidopsis thaliana... 54 3e-005
gb|BP814763.1|BP814763 BP814763 RAFL19 Arabidopsis thaliana... 54 3e-005
gb|BP818870.1|BP818870 BP818870 RAFL19 Arabidopsis thaliana... 54 3e-005
gb|BP840245.1|BP840245 BP840245 RAFL19 Arabidopsis thaliana... 54 3e-005
gb|BP840919.1|BP840919 BP840919 RAFL19 Arabidopsis thaliana... 54 3e-005
gb|AV818422.1|AV818422 AV818422 RAFL9 Arabidopsis thaliana ... 52 1e-004
gb|BP585354.1|BP585354 BP585354 RAFL15 Arabidopsis thaliana... 52 1e-004
gb|BP635353.1|BP635353 BP635353 RAFL17 Arabidopsis thaliana... 52 1e-004
gb|BP817085.1|BP817085 BP817085 RAFL19 Arabidopsis thaliana... 52 1e-004
gb|BP834214.1|BP834214 BP834214 RAFL19 Arabidopsis thaliana... 52 1e-004
gb|BH170325.1|BH170325 SALK_002722 Arabidopsis thaliana TDN... 50 5e-004
gb|T45404.1|T45404 8667 Lambda-PRL2 Arabidopsis thaliana cD... 50 5e-004
gb|T42421.1|T42421 5684 Lambda-PRL2 Arabidopsis thaliana cD... 50 5e-004
gb|AV533468.1|AV533468 AV533468 Arabidopsis thaliana flower... 50 5e-004
gb|BP572479.1|BP572479 BP572479 RAFL14 Arabidopsis thaliana... 50 5e-004
gb|BP573979.1|BP573979 BP573979 RAFL14 Arabidopsis thaliana... 50 5e-004
gb|BP800078.1|BP800078 BP800078 RAFL14 Arabidopsis thaliana... 50 5e-004
gb|BH170327.1|BH170327 SALK_002728 Arabidopsis thaliana TDN... 48 0.002
gb|AA389804.1|AA389804 OS142 NaCl-treated Arabidopsis subtr... 48 0.002
gb|T13848.1|T13848 2013 Lambda-PRL2 Arabidopsis thaliana cD... 48 0.002
gb|T75818.1|T75818 10596 Lambda-PRL2 Arabidopsis thaliana c... 48 0.002
gb|AV531062.1|AV531062 AV531062 Arabidopsis thaliana flower... 48 0.002
gb|BP580356.1|BP580356 BP580356 RAFL14 Arabidopsis thaliana... 48 0.002
gb|BP598735.1|BP598735 BP598735 RAFL16 Arabidopsis thaliana... 48 0.002
gb|BP795478.1|BP795478 BP795478 RAFL7 Arabidopsis thaliana ... 48 0.002
gb|BP799846.1|BP799846 BP799846 RAFL14 Arabidopsis thaliana... 48 0.002
gb|BP580749.1|BP580749 BP580749 RAFL14 Arabidopsis thaliana... 46 0.008
gb|BP590365.1|BP590365 BP590365 RAFL15 Arabidopsis thaliana... 46 0.008
gb|BP592064.1|BP592064 BP592064 RAFL15 Arabidopsis thaliana... 46 0.008
gb|BP593157.1|BP593157 BP593157 RAFL15 Arabidopsis thaliana... 46 0.008
gb|BP813419.1|BP813419 BP813419 RAFL19 Arabidopsis thaliana... 46 0.008
gb|BP815812.1|BP815812 BP815812 RAFL19 Arabidopsis thaliana... 46 0.008
gb|BP817848.1|BP817848 BP817848 RAFL19 Arabidopsis thaliana... 46 0.008
gb|BP824898.1|BP824898 BP824898 RAFL19 Arabidopsis thaliana... 46 0.008
gb|BP832327.1|BP832327 BP832327 RAFL19 Arabidopsis thaliana... 46 0.008
gb|BP836832.1|BP836832 BP836832 RAFL19 Arabidopsis thaliana... 46 0.008
gb|BP802351.1|BP802351 BP802351 RAFL14 Arabidopsis thaliana... 44 0.033
gb|CL463132.1|CL463132 SAIL_1178_A04.v1 SAIL Collection Ara... 42 0.13
gb|T43406.1|T43406 6669 Lambda-PRL2 Arabidopsis thaliana cD... 42 0.13
gb|BP569822.1|BP569822 BP569822 RAFL14 Arabidopsis thaliana... 42 0.13
>gb|W43275.1|W43275 22654 Lambda-PRL2 Arabidopsis thaliana cDNA clone 249E8T7, mRNA
sequence
Length = 544
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 336 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 277
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 276 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 217
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 216 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 157
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 156 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 112
>gb|BE038784.1|BE038784 AB06G11 AB Arabidopsis thaliana cDNA 5' similar to 60s ribosomal
protein l12, mRNA sequence
Length = 709
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 366 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 307
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 306 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 247
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 246 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 187
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 186 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 142
>gb|AV824600.1|AV824600 AV824600 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-73-E06 5',
mRNA sequence
Length = 616
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 381 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 322
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 321 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 262
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 261 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 202
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 201 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 157
>gb|AV537468.1|AV537468 AV537468 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ06f11F 3', mRNA sequence
Length = 602
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Plus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 312 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 371
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 372 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 431
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 432 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 491
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 492 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 536
>gb|AV549360.1|AV549360 AV549360 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ06f11R 5', mRNA sequence
Length = 399
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 334 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 275
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 274 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 215
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 214 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 155
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 154 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 110
>gb|AV565172.1|AV565172 AV565172 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ218g11F 3', mRNA sequence
Length = 528
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 354 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 295
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 294 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 235
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 234 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 175
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 174 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 130
>gb|CK117662.1|CK117662 214j08.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011J08214
5-PRIME, mRNA sequence
Length = 749
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 376 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 317
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 316 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 257
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 256 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 197
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 196 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 152
>gb|CK117738.1|CK117738 213p15.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011P15213
5-PRIME, mRNA sequence
Length = 586
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 360 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 301
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 300 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 241
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 240 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 181
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 180 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 136
>gb|CK117746.1|CK117746 214c16.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011C16214
5-PRIME, mRNA sequence
Length = 737
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 375 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 316
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 315 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 256
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 255 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 196
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 195 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 151
>gb|CK118518.1|CK118518 216n18.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011N18216
5-PRIME, mRNA sequence
Length = 622
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 358 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 299
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 298 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 239
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 238 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 179
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 178 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 134
>gb|CK118659.1|CK118659 216g13.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011G13216
5-PRIME, mRNA sequence
Length = 494
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 369 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 310
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 309 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 250
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 249 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 190
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 189 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 145
>gb|CK118670.1|CK118670 216h01.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011H01216
5-PRIME, mRNA sequence
Length = 469
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 242 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 183
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 182 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 123
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 122 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 63
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 62 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 18
>gb|CK119105.1|CK119105 214h02.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011H02214
5-PRIME, mRNA sequence
Length = 641
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 376 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 317
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 316 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 257
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 256 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 197
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 196 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 152
>gb|CK119590.1|CK119590 211j12.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011J12211
5-PRIME, mRNA sequence
Length = 623
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 375 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 316
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 315 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 256
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 255 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 196
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 195 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 151
>gb|CK120530.1|CK120530 207d10.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011D10207
5-PRIME, mRNA sequence
Length = 729
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 330 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 271
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 270 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 211
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 210 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 151
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 150 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 106
>gb|CK120531.1|CK120531 207d12.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011D12207
5-PRIME, mRNA sequence
Length = 748
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 330 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 271
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 270 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 211
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 210 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 151
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 150 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 106
>gb|BP561242.2|BP561242 BP561242 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-69-L07 5',
mRNA sequence
Length = 482
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 383 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 324
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 323 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 264
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 263 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 204
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 203 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 159
>gb|BP818703.1|BP818703 BP818703 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-48-P08 5',
mRNA sequence
Length = 380
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 379 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 320
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 319 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 260
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 259 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 200
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 199 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 155
>gb|BP818831.1|BP818831 BP818831 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-49-F08 5',
mRNA sequence
Length = 401
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 388 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 329
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 328 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 269
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 268 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 209
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 208 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 164
>gb|BP823866.1|BP823866 BP823866 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-07-M19 5',
mRNA sequence
Length = 392
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 387 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 328
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 327 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 268
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 267 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 208
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 207 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 163
>gb|BP839073.1|BP839073 BP839073 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-25-O13 5',
mRNA sequence
Length = 419
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 367 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 308
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 307 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 248
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 247 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 188
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 187 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 143
>emb|AX364110.1| Sequence 117 from Patent WO0208410
Length = 630
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 285 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 226
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 225 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 166
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 165 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 106
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 105 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 61
>emb|AX366192.1| Sequence 111 from Patent WO0208411
Length = 630
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 285 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 226
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 225 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 166
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 165 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 106
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 105 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 61
>gb|AY140102.1| Arabidopsis thaliana 60S ribosomal protein L12-like protein
(At3g53430) mRNA, complete cds
Length = 715
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 389 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 330
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 329 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 270
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 269 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 210
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 209 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 165
>gb|BT002590.1| Arabidopsis thaliana 60S ribosomal protein L12-like protein
(At3g53430) mRNA, complete cds
Length = 548
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 315 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 256
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 255 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 196
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 195 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 136
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 135 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 91
>emb|AJ834880.1| Arabidopsis thaliana T-DNA flanking sequence, left border, clone
076E01
Length = 726
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 389 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 330
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 329 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 270
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 269 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 210
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 209 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 165
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Plus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 19773532 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 19773591
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 19773592 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 19773651
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 19773652 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 19773711
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 19773712 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 19773756
>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12
Length = 144628
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Plus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 50751 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 50810
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 50811 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 50870
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 50871 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 50930
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 50931 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 50975
>ref|NM_115203.2| Arabidopsis thaliana structural constituent of ribosome AT3G53430
mRNA, complete cds
Length = 783
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 389 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 330
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 329 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 270
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 269 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 210
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 209 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 165
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 105 bits (53), Expect = 1e-020
Identities = 182/225 (80%)
Strand = Plus / Plus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 19821059 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 19821118
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 19821119 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 19821178
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 19821179 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 19821238
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 19821239 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 19821283
>gb|AV828348.1|AV828348 AV828348 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-27-A21 5',
mRNA sequence
Length = 471
Score = 103 bits (52), Expect = 4e-020
Identities = 172/212 (81%)
Strand = Plus / Minus
Query: 419 tgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgccttgatgacg 478
||||| |||||||| |||||||| ||||| ||||| |||||||| | |||||||||||||
Sbjct: 377 tgcttaatgttcttcaccttcttacggtctctctctggctccttcaacgccttgatgacg 318
Query: 479 agcgcggcggcggaggggacgacggagaccttggcctggcggttctggacggtgagcttg 538
|| || || || || || || |||| ||||| || || || ||||| || || |||||
Sbjct: 317 agagctgcagcagatggaaccacggttaccttagcttgacgattctgaaccgtcagcttc 258
Query: 539 acggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcctcgccgatc 598
|||||||| || || || ||||| || ||||||||||| || |||||||| || ||||||
Sbjct: 257 acggtgacacgaagtcctttccattctttggccgtctctttcgcgatgtcttctccgatc 198
Query: 599 ttcttcggggagagcccgagcgggccgatctt 630
||||| || | ||| ||||| || ||||||||
Sbjct: 197 ttctttggtgcgagaccgagaggaccgatctt 166
>gb|BP830175.1|BP830175 BP830175 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-84-I07 5',
mRNA sequence
Length = 376
Score = 103 bits (52), Expect = 4e-020
Identities = 172/212 (81%)
Strand = Plus / Minus
Query: 419 tgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgccttgatgacg 478
||||| |||||||| |||||||| ||||| ||||| |||||||| | |||||||||||||
Sbjct: 355 tgcttaatgttcttcaccttcttacggtctctctctggctccttcaacgccttgatgacg 296
Query: 479 agcgcggcggcggaggggacgacggagaccttggcctggcggttctggacggtgagcttg 538
|| || || || || || || |||| ||||| || || || ||||| || || |||||
Sbjct: 295 agagctgcagcagatggaaccacggttaccttagcttgacgattctgaaccgtcagcttc 236
Query: 539 acggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcctcgccgatc 598
|||||||| || || || ||||| || ||||||||||| || |||||||| || ||||||
Sbjct: 235 acggtgacacgaagtcctttccattctttggccgtctctttcgcgatgtcttctccgatc 176
Query: 599 ttcttcggggagagcccgagcgggccgatctt 630
||||| || | ||| ||||| || ||||||||
Sbjct: 175 ttctttggtgcgagaccgagaggaccgatctt 144
>gb|BP820302.1|BP820302 BP820302 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-54-B19 5',
mRNA sequence
Length = 373
Score = 101 bits (51), Expect = 2e-019
Identities = 171/211 (81%)
Strand = Plus / Minus
Query: 420 gcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgccttgatgacga 479
|||| |||||||| |||||||| ||||| ||||| |||||||| | ||||||||||||||
Sbjct: 373 gcttaatgttcttcaccttcttacggtctctctctggctccttcaacgccttgatgacga 314
Query: 480 gcgcggcggcggaggggacgacggagaccttggcctggcggttctggacggtgagcttga 539
| || || || || || || |||| ||||| || || || ||||| || || ||||| |
Sbjct: 313 gagctgcagcagatggaaccacggttaccttagcttgacgattctgaaccgtcagcttca 254
Query: 540 cggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcctcgccgatct 599
||||||| || || || ||||| || ||||||||||| || |||||||| || |||||||
Sbjct: 253 cggtgacacgaagtcctttccattctttggccgtctctttcgcgatgtcttctccgatct 194
Query: 600 tcttcggggagagcccgagcgggccgatctt 630
|||| || | ||| ||||| || ||||||||
Sbjct: 193 tctttggtgcgagaccgagaggaccgatctt 163
>emb|BX822885.1|CNS0A73Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB6ZH12 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 637
Score = 97.6 bits (49), Expect = 3e-018
Identities = 181/225 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 379 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 320
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 319 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 260
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || |||||||| || || |||||
Sbjct: 259 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtttctttcgcgat 200
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 199 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 155
>gb|BP812809.1|BP812809 BP812809 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-04-H23 5',
mRNA sequence
Length = 406
Score = 95.6 bits (48), Expect = 1e-017
Identities = 171/212 (80%)
Strand = Plus / Minus
Query: 419 tgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgccttgatgacg 478
||||| |||||||| |||||||| ||||| ||||| |||||||| | |||||||||||||
Sbjct: 357 tgcttaatgttcttcaccttcttacggtctctctctggctccttcaacgccttgatgacg 298
Query: 479 agcgcggcggcggaggggacgacggagaccttggcctggcggttctggacggtgagcttg 538
|| || || || || || || |||| ||||| || || || ||||| || || |||||
Sbjct: 297 agagctgcagcagatggaaccacggttaccttagcttgacgattctgaaccgtcagcttc 238
Query: 539 acggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcctcgccgatc 598
|||||||| || || || ||||| || ||||||||||| || ||||||| || ||||||
Sbjct: 237 acggtgacacgaagtcctttccattctttggccgtctctttctcgatgtcttctccgatc 178
Query: 599 ttcttcggggagagcccgagcgggccgatctt 630
||||| || | ||| ||||| || ||||||||
Sbjct: 177 ttctttggtgcgagaccgagaggaccgatctt 146
>gb|BP862130.1|BP862130 BP862130 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-61-M03 5',
mRNA sequence
Length = 386
Score = 95.6 bits (48), Expect = 1e-017
Identities = 171/212 (80%)
Strand = Plus / Minus
Query: 419 tgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgccttgatgacg 478
||||| |||||||| |||||||| ||||| ||||| |||||||| |||||||||||||
Sbjct: 367 tgcttaatgttcttcaccttcttacggtctctctctggctccttcgacgccttgatgacg 308
Query: 479 agcgcggcggcggaggggacgacggagaccttggcctggcggttctggacggtgagcttg 538
|| || || || || || || |||| ||||| || || || ||||| || || |||||
Sbjct: 307 agagctgcagcagatggaaccacggttaccttagcttgacgattctgaaccgtcagcttc 248
Query: 539 acggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcctcgccgatc 598
|||||||| || || || ||||| || ||||||||||| || |||||||| || ||||||
Sbjct: 247 acggtgacacgaagtcctttccattctttggccgtctctttcgcgatgtcttctccgatc 188
Query: 599 ttcttcggggagagcccgagcgggccgatctt 630
||||| || | ||| ||||| || ||||||||
Sbjct: 187 ttctttggtgcgagaccgagaggaccgatctt 156
>gb|BP827852.1|BP827852 BP827852 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-76-O04 5',
mRNA sequence
Length = 384
Score = 91.7 bits (46), Expect = 2e-016
Identities = 160/198 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| ||||||||
Sbjct: 380 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcga 321
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 320 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 261
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 260 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 201
Query: 586 gtcctcgccgatcttctt 603
||| || |||||||||||
Sbjct: 200 gtcttctccgatcttctt 183
>gb|BP827663.1|BP827663 BP827663 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-76-E13 5',
mRNA sequence
Length = 385
Score = 89.7 bits (45), Expect = 6e-016
Identities = 172/213 (80%), Gaps = 1/213 (0%)
Strand = Plus / Minus
Query: 419 tgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgccttgatgacg 478
||||| |||||||| |||||||| ||||| ||||| |||||||| | |||||||||||||
Sbjct: 375 tgcttaatgttcttcaccttcttacggtctctctctggctccttcaacgccttgatgacg 316
Query: 479 agcgcggcggcggaggggacgacggagaccttggcctggcggttctgga-cggtgagctt 537
|| || || || || || || |||| ||||| || || || ||||| | | || |||||
Sbjct: 315 agagctgcagcagatggaaccacggttaccttagcttgacgattctgaagccgtcagctt 256
Query: 538 gacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcctcgccgat 597
|||||||| || || || ||||| || ||||||||||| || |||||||| || |||||
Sbjct: 255 cacggtgacacgaagtcctttccattctttggccgtctctttcgcgatgtcttctccgat 196
Query: 598 cttcttcggggagagcccgagcgggccgatctt 630
|||||| || | ||| ||||| || ||||||||
Sbjct: 195 cttctttggtgcgagaccgagaggaccgatctt 163
>gb|BP864359.1|BP864359 BP864359 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-70-A03 5',
mRNA sequence
Length = 389
Score = 89.7 bits (45), Expect = 6e-016
Identities = 181/225 (80%), Gaps = 1/225 (0%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 378 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 319
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || ||||
Sbjct: 318 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattct- 260
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 259 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 200
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 199 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 155
>gb|BP831022.1|BP831022 BP831022 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-87-J21 5',
mRNA sequence
Length = 393
Score = 87.7 bits (44), Expect = 2e-015
Identities = 170/212 (80%)
Strand = Plus / Minus
Query: 419 tgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgccttgatgacg 478
||||| |||||||| |||||||| ||||| ||||| |||||||| |||||||||||||
Sbjct: 377 tgcttaatgttcttcaccttcttacggtctctctctggctccttccacgccttgatgacg 318
Query: 479 agcgcggcggcggaggggacgacggagaccttggcctggcggttctggacggtgagcttg 538
|| || || || || || || |||| ||||| || || || ||||| || || |||||
Sbjct: 317 agagctgcagcagatggaaccacggttaccttagcttgacgattctgaaccgtcagcttc 258
Query: 539 acggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcctcgccgatc 598
||||||| || || || ||||| || ||||||||||| || |||||||| || ||||||
Sbjct: 257 gcggtgacacgaagtcctttccattctttggccgtctctttcgcgatgtcttctccgatc 198
Query: 599 ttcttcggggagagcccgagcgggccgatctt 630
||||| || | ||| ||||| || ||||||||
Sbjct: 197 ttctttggtgcgagaccgagaggaccgatctt 166
>gb|BP868774.1|BP868774 BP868774 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-85-I03 5',
mRNA sequence
Length = 386
Score = 87.7 bits (44), Expect = 2e-015
Identities = 170/212 (80%)
Strand = Plus / Minus
Query: 419 tgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgccttgatgacg 478
||||| || ||||| |||||||| || || ||||| |||||||| | |||||||||||||
Sbjct: 375 tgcttaattttcttcaccttcttacgttctctctctggctccttcaacgccttgatgacg 316
Query: 479 agcgcggcggcggaggggacgacggagaccttggcctggcggttctggacggtgagcttg 538
|| || || || || || || |||| ||||| || || || ||||| || || |||||
Sbjct: 315 agagctgcagcagatggaaccacggttaccttagcttgacgattctgaaccgtcagcttc 256
Query: 539 acggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcctcgccgatc 598
|||||||| || || || ||||| || ||||||||||| || |||||||| || ||||||
Sbjct: 255 acggtgacacgaagtcctttccattctttggccgtctctttcgcgatgtcttctccgatc 196
Query: 599 ttcttcggggagagcccgagcgggccgatctt 630
||||| || | ||| ||||| || ||||||||
Sbjct: 195 ttctttggtgcgagaccgagaggaccgatctt 164
>gb|AV525598.1|AV525598 AV525598 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD26h08R 5', mRNA
sequence
Length = 342
Score = 85.7 bits (43), Expect = 1e-014
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 190 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 131
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 130 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 71
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| |||||||| || || || ||||| || ||||||||||| || |||||
Sbjct: 70 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 11
Query: 586 gtc 588
|||
Sbjct: 10 gtc 8
>gb|BP801717.1|BP801717 BP801717 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-21-B04 5',
mRNA sequence
Length = 374
Score = 81.8 bits (41), Expect = 2e-013
Identities = 150/185 (81%), Gaps = 1/185 (0%)
Strand = Plus / Minus
Query: 419 tgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgccttgatgacg 478
||||| |||||||| |||||||| ||||| ||||| |||||||| |||||||||||||
Sbjct: 374 tgcttaatgttcttcaccttcttacggtctctctctggctccttcgacgccttgatgacg 315
Query: 479 agcgcggcggcggaggggacgacggagaccttggcctggcggttctggacggtgagcttg 538
|| || || || || |||| |||| ||||| || || || ||||| || || |||||
Sbjct: 314 agagctgcagcaga-tggaccacggttaccttagcttgacgattctgaaccgtcagcttc 256
Query: 539 acggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcctcgccgatc 598
|||||||| || || || ||||| || ||||||||||| || |||||||| || ||||||
Sbjct: 255 acggtgacacgaagtcctttccattctttggccgtctctttcgcgatgtcttctccgatc 196
Query: 599 ttctt 603
|||||
Sbjct: 195 ttctt 191
>emb|BX825878.1|CNS0A66S Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL6ZA11 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 665
Score = 81.8 bits (41), Expect = 2e-013
Identities = 179/225 (79%)
Strand = Plus / Minus
Query: 406 gatgttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
|||||| ||| | ||||| |||||||| |||||||| ||||| |||| |||||||| |
Sbjct: 353 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctttggctccttcaa 294
Query: 466 cgccttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctg 525
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 293 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 234
Query: 526 gacggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgat 585
|| || ||||| ||| | || || || || ||||| || ||||||||||| || |||||
Sbjct: 233 aaccgtcagcttcacgttaacacgaagtcctttccattctttggccgtctctttcgcgat 174
Query: 586 gtcctcgccgatcttcttcggggagagcccgagcgggccgatctt 630
||| || ||||||||||| || | ||| ||||| || ||||||||
Sbjct: 173 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 129
>gb|AV552325.1|AV552325 AV552325 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ26g05R 5', mRNA sequence
Length = 352
Score = 79.8 bits (40), Expect = 6e-013
Identities = 151/188 (80%)
Strand = Plus / Minus
Query: 443 cggtccctctcgggctccttgagcgccttgatgacgagcgcggcggcggaggggacgacg 502
||||| ||||| |||||||| | ||||||||||||||| || || || || || || |||
Sbjct: 352 cggtctctctctggctccttcaacgccttgatgacgagagctgcagcagatggaaccacg 293
Query: 503 gagaccttggcctggcggttctggacggtgagcttgacggtgacgcgcaggcccttccag 562
| ||||| || || || ||||| || || ||||| |||||||| || || || |||||
Sbjct: 292 gttaccttagcttgacgattctgaaccgtcagcttcacggtgacacgaagtcctttccat 233
Query: 563 tccttggccgtctccttggcgatgtcctcgccgatcttcttcggggagagcccgagcggg 622
|| ||||||||||| || |||||||| || ||||||||||| || | ||| ||||| ||
Sbjct: 232 tctttggccgtctctttcgcgatgtcttctccgatcttctttggtgcgagaccgagagga 173
Query: 623 ccgatctt 630
||||||||
Sbjct: 172 ccgatctt 165
>gb|BP850158.1|BP850158 BP850158 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-11-N22 5',
mRNA sequence
Length = 374
Score = 79.8 bits (40), Expect = 6e-013
Identities = 170/212 (80%), Gaps = 1/212 (0%)
Strand = Plus / Minus
Query: 419 tgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgccttgatgacg 478
||||| |||||||| |||||||| || || ||||| |||||||| |||||||||||||
Sbjct: 374 tgcttaatgttcttcaccttcttacg-tctctctctggctccttcgacgccttgatgacg 316
Query: 479 agcgcggcggcggaggggacgacggagaccttggcctggcggttctggacggtgagcttg 538
|| || || || || || || |||| ||||| || || || ||||| || || |||||
Sbjct: 315 agagctgcagcagatggaaccacggttaccttagcttgacgattctgaaccgtcagcttc 256
Query: 539 acggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcctcgccgatc 598
|||||||| || || || ||||| || ||||||||||| || |||||||| || ||||||
Sbjct: 255 acggtgacacgaagtcctttccattctttggccgtctctttcgcgatgtcttctccgatc 196
Query: 599 ttcttcggggagagcccgagcgggccgatctt 630
||||| || | ||| ||||| || ||||||||
Sbjct: 195 ttctttggtgcgagaccgagaggaccgatctt 164
>gb|CL501003.1|CL501003 SAIL_691_D11.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_691_D11.v1, DNA sequence
Length = 943
Score = 77.8 bits (39), Expect = 2e-012
Identities = 189/239 (79%)
Strand = Plus / Plus
Query: 422 ttgatgttcttgaccttcttccggtccctctcgggctccttgagcgccttgatgacgagc 481
||||||||||| || ||||||| || ||||| ||||||||||| || |||||||| ||
Sbjct: 148 ttgatgttcttcactttcttcctatctctctctggctccttgagggctttgatgactaga 207
Query: 482 gcggcggcggaggggacgacggagaccttggcctggcggttctggacggtgagcttgacg 541
|| || ||||| || || || | |||||| || || || ||||| || || ||||| |||
Sbjct: 208 gccgctgcggatggaaccactgtgaccttagcttgacgattctgtaccgtaagcttcacg 267
Query: 542 gtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcctcgccgatcttc 601
||||| || || || ||||| || || || ||||| ||||||||||| || |||||||||
Sbjct: 268 gtgactcgaagacctttccattctttcgctgtctctttggcgatgtcttctccgatcttc 327
Query: 602 ttcggggagagcccgagcgggccgatcttgggcgccagggacgacgccgcgccgacctc 660
|| || | || ||||| || |||||||| || || || || ||||| || ||||||||
Sbjct: 328 tttggtgccagaccgagtggaccgatctttggagcgagtgaagacgctgctccgacctc 386
>gb|T88600.1|T88600 12296 Lambda-PRL2 Arabidopsis thaliana cDNA clone 158K20T7, mRNA
sequence
Length = 430
Score = 77.8 bits (39), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 422 ttgatgttcttgaccttcttccggtccctctcgggctccttgagcgccttgatgacgagc 481
||||||||||| || ||||||| || ||||| ||||||||||| || |||||||| ||
Sbjct: 316 ttgatgttcttcactttcttcctatctctctctggctccttgagggctttgatgactaga 257
Query: 482 gcggcggcggaggggacgacggagaccttggcctggcggttctggacggtgagcttgacg 541
|| || ||||| || || || | |||||| || || || ||||| || || ||||| |||
Sbjct: 256 gccgctgcggatggaaccactgtgaccttagcttgacgattctgtaccgtaagcttcacg 197
Query: 542 gtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcctcgccgatcttc 601
||||| || || || ||||| || || || ||||| ||||||||||| || |||||||||
Sbjct: 196 gtgactcgaagacctttccantctttcgctgtctctttggcgatgtcttctccgatcttc 137
Query: 602 tt 603
||
Sbjct: 136 tt 135
>gb|AV782949.1|AV782949 AV782949 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-03-L24 3',
mRNA sequence
Length = 600
Score = 77.8 bits (39), Expect = 2e-012
Identities = 189/239 (79%)
Strand = Plus / Plus
Query: 422 ttgatgttcttgaccttcttccggtccctctcgggctccttgagcgccttgatgacgagc 481
||||||||||| || ||||||| || ||||| ||||||||||| || |||||||| ||
Sbjct: 358 ttgatgttcttcactttcttcctatctctctctggctccttgagggctttgatgactaga 417
Query: 482 gcggcggcggaggggacgacggagaccttggcctggcggttctggacggtgagcttgacg 541
|| || ||||| || || || | |||||| || || || ||||| || || ||||| |||
Sbjct: 418 gccgctgcggatggaaccactgtgaccttagcttgacgattctgtaccgtaagcttcacg 477
Query: 542 gtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcctcgccgatcttc 601
||||| || || || ||||| || || || ||||| ||||||||||| || |||||||||
Sbjct: 478 gtgactcgaagacctttccattctttcgctgtctctttggcgatgtcttctccgatcttc 537
Query: 602 ttcggggagagcccgagcgggccgatcttgggcgccagggacgacgccgcgccgacctc 660
|| || | || ||||| || |||||||| || || || || ||||| || ||||||||
Sbjct: 538 tttggtgccagaccgagtggaccgatctttggagcgagtgaagacgctgctccgacctc 596
>gb|AV530701.1|AV530701 AV530701 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB007e01F 3', mRNA sequence
Length = 388
Score = 77.8 bits (39), Expect = 2e-012
Identities = 189/239 (79%)
Strand = Plus / Minus
Query: 422 ttgatgttcttgaccttcttccggtccctctcgggctccttgagcgccttgatgacgagc 481
||||||||||| || ||||||| || ||||| ||||||||||| || |||||||| ||
Sbjct: 295 ttgatgttcttcactttcttcctatctctctctggctccttgagggctttgatgactaga 236
Query: 482 gcggcggcggaggggacgacggagaccttggcctggcggttctggacggtgagcttgacg 541
|| || ||||| || || || | |||||| || || || ||||| || || ||||| |||
Sbjct: 235 gccgctgcggatggaaccactgtgaccttagcttgacgattctgtaccgtaagcttcacg 176
Query: 542 gtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcctcgccgatcttc 601
||||| || || || ||||| || || || ||||| ||||||||||| || |||||||||
Sbjct: 175 gtgactcgaagacctttccattctttcgctgtctctttggcgatgtcttctccgatcttc 116
Query: 602 ttcggggagagcccgagcgggccgatcttgggcgccagggacgacgccgcgccgacctc 660
|| || | || ||||| || |||||||| || || || || ||||| || ||||||||
Sbjct: 115 tttggtgccagaccgagtggaccgatctttggagcgagtgaagacgctgctccgacctc 57
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 267,984
Number of Sequences: 1013581
Number of extensions: 267984
Number of successful extensions: 22738
Number of sequences better than 0.5: 162
Number of HSP's better than 0.5 without gapping: 154
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 22022
Number of HSP's gapped (non-prelim): 678
length of query: 733
length of database: 908,940,872
effective HSP length: 20
effective length of query: 713
effective length of database: 888,669,252
effective search space: 633621176676
effective search space used: 633621176676
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)