BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804918.2.4
(634 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CL501003.1|CL501003 SAIL_691_D11.v1 SAIL Collection Arab... 98 2e-018
gb|AV530701.1|AV530701 AV530701 Arabidopsis thaliana flower... 98 2e-018
gb|BP803702.1|BP803702 BP803702 RAFL14 Arabidopsis thaliana... 98 2e-018
gb|BP867222.1|BP867222 BP867222 RAFL21 Arabidopsis thaliana... 98 2e-018
gb|AY039614.1| Arabidopsis thaliana AT5g60670/mup24_80 mRNA... 98 2e-018
gb|AY078025.1| Arabidopsis thaliana AT5g60670/mup24_80 mRNA... 98 2e-018
gb|AY088164.1| Arabidopsis thaliana clone 42276 mRNA, compl... 98 2e-018
dbj|AB005246.1| Arabidopsis thaliana genomic DNA, chromosom... 98 2e-018
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 98 2e-018
ref|NM_125460.2| Arabidopsis thaliana structural constituen... 98 2e-018
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 98 2e-018
gb|AV782949.1|AV782949 AV782949 RAFL5 Arabidopsis thaliana ... 94 3e-017
gb|Z47613.1|Z47613 ATTS4469 AC16H Arabidopsis thaliana cDNA... 92 1e-016
gb|T88600.1|T88600 12296 Lambda-PRL2 Arabidopsis thaliana c... 92 1e-016
gb|W43275.1|W43275 22654 Lambda-PRL2 Arabidopsis thaliana c... 90 5e-016
gb|AI998344.1|AI998344 701545326 A. thaliana, Columbia Col-... 90 5e-016
gb|BE038784.1|BE038784 AB06G11 AB Arabidopsis thaliana cDNA... 90 5e-016
gb|AV824600.1|AV824600 AV824600 RAFL6 Arabidopsis thaliana ... 90 5e-016
gb|AV537468.1|AV537468 AV537468 Arabidopsis thaliana roots ... 90 5e-016
gb|AV549360.1|AV549360 AV549360 Arabidopsis thaliana roots ... 90 5e-016
gb|AV565172.1|AV565172 AV565172 Arabidopsis thaliana green ... 90 5e-016
gb|CK117662.1|CK117662 214j08.p1 AtM1 Arabidopsis thaliana ... 90 5e-016
gb|CK117738.1|CK117738 213p15.p1 AtM1 Arabidopsis thaliana ... 90 5e-016
gb|CK117746.1|CK117746 214c16.p1 AtM1 Arabidopsis thaliana ... 90 5e-016
gb|CK118518.1|CK118518 216n18.p1 AtM1 Arabidopsis thaliana ... 90 5e-016
gb|CK118659.1|CK118659 216g13.p1 AtM1 Arabidopsis thaliana ... 90 5e-016
gb|CK118670.1|CK118670 216h01.p1 AtM1 Arabidopsis thaliana ... 90 5e-016
gb|CK119105.1|CK119105 214h02.p1 AtM1 Arabidopsis thaliana ... 90 5e-016
gb|CK119590.1|CK119590 211j12.p1 AtM1 Arabidopsis thaliana ... 90 5e-016
gb|CK120530.1|CK120530 207d10.p1 AtM1 Arabidopsis thaliana ... 90 5e-016
gb|CK120531.1|CK120531 207d12.p1 AtM1 Arabidopsis thaliana ... 90 5e-016
gb|BP561242.2|BP561242 BP561242 RAFL6 Arabidopsis thaliana ... 90 5e-016
gb|BP818703.1|BP818703 BP818703 RAFL19 Arabidopsis thaliana... 90 5e-016
gb|BP818831.1|BP818831 BP818831 RAFL19 Arabidopsis thaliana... 90 5e-016
gb|BP823866.1|BP823866 BP823866 RAFL19 Arabidopsis thaliana... 90 5e-016
gb|BP839073.1|BP839073 BP839073 RAFL19 Arabidopsis thaliana... 90 5e-016
emb|AX364110.1| Sequence 117 from Patent WO0208410 90 5e-016
emb|AX366192.1| Sequence 111 from Patent WO0208411 90 5e-016
gb|AY140102.1| Arabidopsis thaliana 60S ribosomal protein L... 90 5e-016
gb|BT002590.1| Arabidopsis thaliana 60S ribosomal protein L... 90 5e-016
emb|AJ834880.1| Arabidopsis thaliana T-DNA flanking sequenc... 90 5e-016
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 90 5e-016
emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome ... 90 5e-016
ref|NM_115203.2| Arabidopsis thaliana structural constituen... 90 5e-016
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 90 5e-016
gb|AV828348.1|AV828348 AV828348 RAFL9 Arabidopsis thaliana ... 88 2e-015
gb|BP830175.1|BP830175 BP830175 RAFL19 Arabidopsis thaliana... 88 2e-015
gb|AV822246.1|AV822246 AV822246 RAFL5 Arabidopsis thaliana ... 86 8e-015
gb|BP820302.1|BP820302 BP820302 RAFL19 Arabidopsis thaliana... 86 8e-015
gb|N37629.1|N37629 18856 Lambda-PRL2 Arabidopsis thaliana c... 84 3e-014
emb|BX822885.1|CNS0A73Z Arabidopsis thaliana Full-length cD... 82 1e-013
gb|AV828159.1|AV828159 AV828159 RAFL9 Arabidopsis thaliana ... 80 5e-013
gb|AV540047.1|AV540047 AV540047 Arabidopsis thaliana roots ... 80 5e-013
gb|AV553827.1|AV553827 AV553827 Arabidopsis thaliana roots ... 80 5e-013
gb|CK118296.1|CK118296 217l15.p1 AtM1 Arabidopsis thaliana ... 80 5e-013
gb|CK121955.1|CK121955 212b01.p1 AtM1 Arabidopsis thaliana ... 80 5e-013
gb|CB253816.1|CB253816 87-E010696-019-002-M21-T7R MPIZ-ADIS... 80 5e-013
gb|BP812809.1|BP812809 BP812809 RAFL19 Arabidopsis thaliana... 80 5e-013
gb|BP812816.1|BP812816 BP812816 RAFL19 Arabidopsis thaliana... 80 5e-013
gb|BP839309.1|BP839309 BP839309 RAFL19 Arabidopsis thaliana... 80 5e-013
gb|BP843350.1|BP843350 BP843350 RAFL21 Arabidopsis thaliana... 80 5e-013
gb|BP862130.1|BP862130 BP862130 RAFL21 Arabidopsis thaliana... 80 5e-013
gb|AF372896.1|AF372896 Arabidopsis thaliana At2g37190/T2N18... 80 5e-013
emb|AX506057.1| Sequence 752 from Patent WO0216655 80 5e-013
gb|BT002673.1| Arabidopsis thaliana At2g37190/T2N18.5 gene,... 80 5e-013
gb|AY086293.1| Arabidopsis thaliana clone 23523 mRNA, compl... 80 5e-013
gb|AC006260.4| Arabidopsis thaliana chromosome 2 clone T2N1... 80 5e-013
emb|BX821140.1|CNS0A930 Arabidopsis thaliana Full-length cD... 80 5e-013
emb|BX821658.1|CNS0A97C Arabidopsis thaliana Full-length cD... 80 5e-013
emb|BX820943.1|CNS0A9IM Arabidopsis thaliana Full-length cD... 80 5e-013
emb|BX819500.1|CNS0AADZ Arabidopsis thaliana Full-length cD... 80 5e-013
ref|NM_129275.2| Arabidopsis thaliana structural constituen... 80 5e-013
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 80 5e-013
gb|BP827663.1|BP827663 BP827663 RAFL19 Arabidopsis thaliana... 74 3e-011
gb|BP827852.1|BP827852 BP827852 RAFL19 Arabidopsis thaliana... 74 3e-011
gb|BP864359.1|BP864359 BP864359 RAFL21 Arabidopsis thaliana... 74 3e-011
gb|BP831022.1|BP831022 BP831022 RAFL19 Arabidopsis thaliana... 72 1e-010
gb|BP850158.1|BP850158 BP850158 RAFL21 Arabidopsis thaliana... 72 1e-010
gb|BP868774.1|BP868774 BP868774 RAFL21 Arabidopsis thaliana... 72 1e-010
gb|N37628.1|N37628 18855 Lambda-PRL2 Arabidopsis thaliana c... 70 5e-010
gb|AI996578.1|AI996578 701667522 A. thaliana, Columbia Col-... 70 5e-010
gb|AV552325.1|AV552325 AV552325 Arabidopsis thaliana roots ... 68 2e-009
gb|BP819055.1|BP819055 BP819055 RAFL19 Arabidopsis thaliana... 68 2e-009
gb|BP836349.1|BP836349 BP836349 RAFL19 Arabidopsis thaliana... 68 2e-009
gb|R90639.1|R90639 16994 Lambda-PRL2 Arabidopsis thaliana c... 66 8e-009
gb|BP801717.1|BP801717 BP801717 RAFL14 Arabidopsis thaliana... 66 8e-009
gb|BP814763.1|BP814763 BP814763 RAFL19 Arabidopsis thaliana... 66 8e-009
emb|BX825878.1|CNS0A66S Arabidopsis thaliana Full-length cD... 66 8e-009
gb|T45404.1|T45404 8667 Lambda-PRL2 Arabidopsis thaliana cD... 64 3e-008
gb|BP802351.1|BP802351 BP802351 RAFL14 Arabidopsis thaliana... 64 3e-008
gb|BH170325.1|BH170325 SALK_002722 Arabidopsis thaliana TDN... 62 1e-007
gb|T75818.1|T75818 10596 Lambda-PRL2 Arabidopsis thaliana c... 62 1e-007
gb|AV525598.1|AV525598 AV525598 Arabidopsis thaliana aboveg... 62 1e-007
gb|BP813419.1|BP813419 BP813419 RAFL19 Arabidopsis thaliana... 62 1e-007
gb|BH170327.1|BH170327 SALK_002728 Arabidopsis thaliana TDN... 60 5e-007
gb|AA389804.1|AA389804 OS142 NaCl-treated Arabidopsis subtr... 60 5e-007
gb|AV831978.1|AV831978 AV831978 RAFL9 Arabidopsis thaliana ... 60 5e-007
gb|BP815812.1|BP815812 BP815812 RAFL19 Arabidopsis thaliana... 60 5e-007
gb|BP816103.1|BP816103 BP816103 RAFL19 Arabidopsis thaliana... 60 5e-007
gb|BP818870.1|BP818870 BP818870 RAFL19 Arabidopsis thaliana... 60 5e-007
gb|BP824898.1|BP824898 BP824898 RAFL19 Arabidopsis thaliana... 60 5e-007
gb|BP840245.1|BP840245 BP840245 RAFL19 Arabidopsis thaliana... 60 5e-007
gb|AV533468.1|AV533468 AV533468 Arabidopsis thaliana flower... 58 2e-006
gb|BP572479.1|BP572479 BP572479 RAFL14 Arabidopsis thaliana... 58 2e-006
gb|BP800078.1|BP800078 BP800078 RAFL14 Arabidopsis thaliana... 58 2e-006
gb|BP819320.1|BP819320 BP819320 RAFL19 Arabidopsis thaliana... 58 2e-006
gb|BP831396.1|BP831396 BP831396 RAFL19 Arabidopsis thaliana... 58 2e-006
gb|N38246.1|N38246 19473 Lambda-PRL2 Arabidopsis thaliana c... 56 8e-006
gb|BP802567.1|BP802567 BP802567 RAFL14 Arabidopsis thaliana... 56 8e-006
gb|BP805963.1|BP805963 BP805963 RAFL16 Arabidopsis thaliana... 56 8e-006
gb|AA728722.1|AA728722 33776 CD4-6 Arabidopsis thaliana cDN... 54 3e-005
gb|T13848.1|T13848 2013 Lambda-PRL2 Arabidopsis thaliana cD... 54 3e-005
gb|AV786322.1|AV786322 AV786322 RAFL6 Arabidopsis thaliana ... 54 3e-005
gb|AV788840.1|AV788840 AV788840 RAFL6 Arabidopsis thaliana ... 54 3e-005
gb|AV801143.1|AV801143 AV801143 RAFL9 Arabidopsis thaliana ... 54 3e-005
gb|AV555547.1|AV555547 AV555547 Arabidopsis thaliana green ... 54 3e-005
gb|BP575630.1|BP575630 BP575630 RAFL14 Arabidopsis thaliana... 54 3e-005
gb|BP587623.1|BP587623 BP587623 RAFL15 Arabidopsis thaliana... 54 3e-005
gb|BP598735.1|BP598735 BP598735 RAFL16 Arabidopsis thaliana... 54 3e-005
gb|BP600035.1|BP600035 BP600035 RAFL16 Arabidopsis thaliana... 54 3e-005
gb|BP630497.1|BP630497 BP630497 RAFL17 Arabidopsis thaliana... 54 3e-005
gb|BP640783.1|BP640783 BP640783 RAFL19 Arabidopsis thaliana... 54 3e-005
gb|BP795478.1|BP795478 BP795478 RAFL7 Arabidopsis thaliana ... 54 3e-005
gb|BP816126.1|BP816126 BP816126 RAFL19 Arabidopsis thaliana... 54 3e-005
gb|BP817848.1|BP817848 BP817848 RAFL19 Arabidopsis thaliana... 54 3e-005
gb|BP840919.1|BP840919 BP840919 RAFL19 Arabidopsis thaliana... 54 3e-005
gb|BP572118.1|BP572118 BP572118 RAFL14 Arabidopsis thaliana... 52 1e-004
gb|BP585354.1|BP585354 BP585354 RAFL15 Arabidopsis thaliana... 52 1e-004
gb|BP635353.1|BP635353 BP635353 RAFL17 Arabidopsis thaliana... 52 1e-004
gb|BP799846.1|BP799846 BP799846 RAFL14 Arabidopsis thaliana... 52 1e-004
gb|BP817085.1|BP817085 BP817085 RAFL19 Arabidopsis thaliana... 52 1e-004
gb|BP827726.1|BP827726 BP827726 RAFL19 Arabidopsis thaliana... 52 1e-004
gb|BP827993.1|BP827993 BP827993 RAFL19 Arabidopsis thaliana... 52 1e-004
gb|BP834214.1|BP834214 BP834214 RAFL19 Arabidopsis thaliana... 52 1e-004
gb|BP838147.1|BP838147 BP838147 RAFL19 Arabidopsis thaliana... 52 1e-004
gb|BP573979.1|BP573979 BP573979 RAFL14 Arabidopsis thaliana... 50 5e-004
gb|BP820962.1|BP820962 BP820962 RAFL19 Arabidopsis thaliana... 50 5e-004
emb|AL767125.1| Arabidopsis thaliana T-DNA flanking sequenc... 48 0.002
emb|AL770989.1| Arabidopsis thaliana T-DNA flanking sequenc... 48 0.002
gb|T42421.1|T42421 5684 Lambda-PRL2 Arabidopsis thaliana cD... 48 0.002
gb|T43406.1|T43406 6669 Lambda-PRL2 Arabidopsis thaliana cD... 48 0.002
gb|AV531062.1|AV531062 AV531062 Arabidopsis thaliana flower... 48 0.002
gb|BP566673.1|BP566673 BP566673 RAFL14 Arabidopsis thaliana... 48 0.002
gb|BP580356.1|BP580356 BP580356 RAFL14 Arabidopsis thaliana... 48 0.002
gb|BP644681.1|BP644681 BP644681 RAFL19 Arabidopsis thaliana... 48 0.002
gb|BP799038.1|BP799038 BP799038 RAFL14 Arabidopsis thaliana... 48 0.002
gb|BP578809.1|BP578809 BP578809 RAFL14 Arabidopsis thaliana... 46 0.007
gb|BP580749.1|BP580749 BP580749 RAFL14 Arabidopsis thaliana... 46 0.007
gb|BP590365.1|BP590365 BP590365 RAFL15 Arabidopsis thaliana... 46 0.007
gb|BP591871.1|BP591871 BP591871 RAFL15 Arabidopsis thaliana... 46 0.007
gb|BP593157.1|BP593157 BP593157 RAFL15 Arabidopsis thaliana... 46 0.007
gb|BP641539.1|BP641539 BP641539 RAFL19 Arabidopsis thaliana... 46 0.007
gb|BP642097.1|BP642097 BP642097 RAFL19 Arabidopsis thaliana... 46 0.007
gb|BP560492.2|BP560492 BP560492 RAFL3 Arabidopsis thaliana ... 46 0.007
gb|BP816375.1|BP816375 BP816375 RAFL19 Arabidopsis thaliana... 46 0.007
gb|BP832327.1|BP832327 BP832327 RAFL19 Arabidopsis thaliana... 46 0.007
gb|BP836832.1|BP836832 BP836832 RAFL19 Arabidopsis thaliana... 46 0.007
gb|BP640306.1|BP640306 BP640306 RAFL19 Arabidopsis thaliana... 44 0.029
gb|BP829017.1|BP829017 BP829017 RAFL19 Arabidopsis thaliana... 44 0.029
gb|BU634553.1|BU634553 005A11 Infected Arabidopsis Leaf Ara... 40 0.45
gb|CA781196.1|CA781196 005A10AF Infected Arabidopsis Leaf A... 40 0.45
gb|BP567294.1|BP567294 BP567294 RAFL14 Arabidopsis thaliana... 40 0.45
gb|BP585342.1|BP585342 BP585342 RAFL15 Arabidopsis thaliana... 40 0.45
gb|BP634351.1|BP634351 BP634351 RAFL17 Arabidopsis thaliana... 40 0.45
gb|BP643218.1|BP643218 BP643218 RAFL19 Arabidopsis thaliana... 40 0.45
gb|BP646969.1|BP646969 BP646969 RAFL19 Arabidopsis thaliana... 40 0.45
gb|BP651390.1|BP651390 BP651390 RAFL19 Arabidopsis thaliana... 40 0.45
gb|BP663240.1|BP663240 BP663240 RAFL21 Arabidopsis thaliana... 40 0.45
gb|BP831853.1|BP831853 BP831853 RAFL19 Arabidopsis thaliana... 40 0.45
>gb|CL501003.1|CL501003 SAIL_691_D11.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_691_D11.v1, DNA sequence
Length = 943
Score = 97.6 bits (49), Expect = 2e-018
Identities = 196/245 (80%)
Strand = Plus / Plus
Query: 381 ttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacgagc 440
||||||||||| || |||||||| || ||||| || |||||||| || |||||||| ||
Sbjct: 148 ttgatgttcttcactttcttcctatctctctctggctccttgagggctttgatgactaga 207
Query: 441 gccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttgacg 500
||||| ||||| || || || | |||||| || || || ||||| || || ||||| |||
Sbjct: 208 gccgctgcggatggaaccactgtgaccttagcttgacgattctgtaccgtaagcttcacg 267
Query: 501 gtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatcttc 560
||||| || || || ||||| || || || ||||| ||||||||||| || |||||||||
Sbjct: 268 gtgactcgaagacctttccattctttcgctgtctctttggcgatgtcttctccgatcttc 327
Query: 561 ttcggggagagaccgagcgggccgatcttgggggccagcgacgacgccgcgccgacctcg 620
|| || | |||||||| || |||||||| || || || || ||||| || ||||||||
Sbjct: 328 tttggtgccagaccgagtggaccgatctttggagcgagtgaagacgctgctccgacctca 387
Query: 621 cctcc 625
|||||
Sbjct: 388 cctcc 392
>gb|AV530701.1|AV530701 AV530701 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB007e01F 3', mRNA sequence
Length = 388
Score = 97.6 bits (49), Expect = 2e-018
Identities = 196/245 (80%)
Strand = Plus / Minus
Query: 381 ttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacgagc 440
||||||||||| || |||||||| || ||||| || |||||||| || |||||||| ||
Sbjct: 295 ttgatgttcttcactttcttcctatctctctctggctccttgagggctttgatgactaga 236
Query: 441 gccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttgacg 500
||||| ||||| || || || | |||||| || || || ||||| || || ||||| |||
Sbjct: 235 gccgctgcggatggaaccactgtgaccttagcttgacgattctgtaccgtaagcttcacg 176
Query: 501 gtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatcttc 560
||||| || || || ||||| || || || ||||| ||||||||||| || |||||||||
Sbjct: 175 gtgactcgaagacctttccattctttcgctgtctctttggcgatgtcttctccgatcttc 116
Query: 561 ttcggggagagaccgagcgggccgatcttgggggccagcgacgacgccgcgccgacctcg 620
|| || | |||||||| || |||||||| || || || || ||||| || ||||||||
Sbjct: 115 tttggtgccagaccgagtggaccgatctttggagcgagtgaagacgctgctccgacctca 56
Query: 621 cctcc 625
|||||
Sbjct: 55 cctcc 51
>gb|BP803702.1|BP803702 BP803702 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-30-K01 5',
mRNA sequence
Length = 381
Score = 97.6 bits (49), Expect = 2e-018
Identities = 196/245 (80%)
Strand = Plus / Minus
Query: 381 ttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacgagc 440
||||||||||| || |||||||| || ||||| || |||||||| || |||||||| ||
Sbjct: 324 ttgatgttcttcactttcttcctatctctctctggctccttgagggctttgatgactaga 265
Query: 441 gccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttgacg 500
||||| ||||| || || || | |||||| || || || ||||| || || ||||| |||
Sbjct: 264 gccgctgcggatggaaccactgtgaccttagcttgacgattctgtaccgtaagcttcacg 205
Query: 501 gtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatcttc 560
||||| || || || ||||| || || || ||||| ||||||||||| || |||||||||
Sbjct: 204 gtgactcgaagacctttccattctttcgctgtctctttggcgatgtcttctccgatcttc 145
Query: 561 ttcggggagagaccgagcgggccgatcttgggggccagcgacgacgccgcgccgacctcg 620
|| || | |||||||| || |||||||| || || || || ||||| || ||||||||
Sbjct: 144 tttggtgccagaccgagtggaccgatctttggagcgagtgaagacgctgctccgacctca 85
Query: 621 cctcc 625
|||||
Sbjct: 84 cctcc 80
>gb|BP867222.1|BP867222 BP867222 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-80-F06 5',
mRNA sequence
Length = 370
Score = 97.6 bits (49), Expect = 2e-018
Identities = 196/245 (80%)
Strand = Plus / Minus
Query: 381 ttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacgagc 440
||||||||||| || |||||||| || ||||| || |||||||| || |||||||| ||
Sbjct: 327 ttgatgttcttcactttcttcctatctctctctggctccttgagggctttgatgactaga 268
Query: 441 gccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttgacg 500
||||| ||||| || || || | |||||| || || || ||||| || || ||||| |||
Sbjct: 267 gccgctgcggatggaaccactgtgaccttagcttgacgattctgtaccgtaagcttcacg 208
Query: 501 gtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatcttc 560
||||| || || || ||||| || || || ||||| ||||||||||| || |||||||||
Sbjct: 207 gtgactcgaagacctttccattctttcgctgtctctttggcgatgtcttctccgatcttc 148
Query: 561 ttcggggagagaccgagcgggccgatcttgggggccagcgacgacgccgcgccgacctcg 620
|| || | |||||||| || |||||||| || || || || ||||| || ||||||||
Sbjct: 147 tttggtgccagaccgagtggaccgatctttggagcgagtgaagacgctgctccgacctca 88
Query: 621 cctcc 625
|||||
Sbjct: 87 cctcc 83
>gb|AY039614.1| Arabidopsis thaliana AT5g60670/mup24_80 mRNA, complete cds
Length = 684
Score = 97.6 bits (49), Expect = 2e-018
Identities = 196/245 (80%)
Strand = Plus / Minus
Query: 381 ttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacgagc 440
||||||||||| || |||||||| || ||||| || |||||||| || |||||||| ||
Sbjct: 326 ttgatgttcttcactttcttcctatctctctctggctccttgagggctttgatgactaga 267
Query: 441 gccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttgacg 500
||||| ||||| || || || | |||||| || || || ||||| || || ||||| |||
Sbjct: 266 gccgctgcggatggaaccactgtgaccttagcttgacgattctgtaccgtaagcttcacg 207
Query: 501 gtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatcttc 560
||||| || || || ||||| || || || ||||| ||||||||||| || |||||||||
Sbjct: 206 gtgactcgaagacctttccattctttcgctgtctctttggcgatgtcttctccgatcttc 147
Query: 561 ttcggggagagaccgagcgggccgatcttgggggccagcgacgacgccgcgccgacctcg 620
|| || | |||||||| || |||||||| || || || || ||||| || ||||||||
Sbjct: 146 tttggtgccagaccgagtggaccgatctttggagcgagtgaagacgctgctccgacctca 87
Query: 621 cctcc 625
|||||
Sbjct: 86 cctcc 82
>gb|AY078025.1| Arabidopsis thaliana AT5g60670/mup24_80 mRNA, complete cds
Length = 501
Score = 97.6 bits (49), Expect = 2e-018
Identities = 196/245 (80%)
Strand = Plus / Minus
Query: 381 ttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacgagc 440
||||||||||| || |||||||| || ||||| || |||||||| || |||||||| ||
Sbjct: 299 ttgatgttcttcactttcttcctatctctctctggctccttgagggctttgatgactaga 240
Query: 441 gccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttgacg 500
||||| ||||| || || || | |||||| || || || ||||| || || ||||| |||
Sbjct: 239 gccgctgcggatggaaccactgtgaccttagcttgacgattctgtaccgtaagcttcacg 180
Query: 501 gtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatcttc 560
||||| || || || ||||| || || || ||||| ||||||||||| || |||||||||
Sbjct: 179 gtgactcgaagacctttccattctttcgctgtctctttggcgatgtcttctccgatcttc 120
Query: 561 ttcggggagagaccgagcgggccgatcttgggggccagcgacgacgccgcgccgacctcg 620
|| || | |||||||| || |||||||| || || || || ||||| || ||||||||
Sbjct: 119 tttggtgccagaccgagtggaccgatctttggagcgagtgaagacgctgctccgacctca 60
Query: 621 cctcc 625
|||||
Sbjct: 59 cctcc 55
>gb|AY088164.1| Arabidopsis thaliana clone 42276 mRNA, complete sequence
Length = 681
Score = 97.6 bits (49), Expect = 2e-018
Identities = 196/245 (80%)
Strand = Plus / Minus
Query: 381 ttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacgagc 440
||||||||||| || |||||||| || ||||| || |||||||| || |||||||| ||
Sbjct: 325 ttgatgttcttcactttcttcctatctctctctggctccttgagggctttgatgactaga 266
Query: 441 gccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttgacg 500
||||| ||||| || || || | |||||| || || || ||||| || || ||||| |||
Sbjct: 265 gccgctgcggatggaaccactgtgaccttagcttgacgattctgtaccgtaagcttcacg 206
Query: 501 gtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatcttc 560
||||| || || || ||||| || || || ||||| ||||||||||| || |||||||||
Sbjct: 205 gtgactcgaagacctttccattctttcgctgtctctttggcgatgtcttctccgatcttc 146
Query: 561 ttcggggagagaccgagcgggccgatcttgggggccagcgacgacgccgcgccgacctcg 620
|| || | |||||||| || |||||||| || || || || ||||| || ||||||||
Sbjct: 145 tttggtgccagaccgagtggaccgatctttggagcgagtgaagacgctgctccgacctcm 86
Query: 621 cctcc 625
|||||
Sbjct: 85 cctcc 81
>dbj|AB005246.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUP24
Length = 77999
Score = 97.6 bits (49), Expect = 2e-018
Identities = 196/245 (80%)
Strand = Plus / Plus
Query: 381 ttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacgagc 440
||||||||||| || |||||||| || ||||| || |||||||| || |||||||| ||
Sbjct: 24470 ttgatgttcttcactttcttcctatctctctctggctccttgagggctttgatgactaga 24529
Query: 441 gccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttgacg 500
||||| ||||| || || || | |||||| || || || ||||| || || ||||| |||
Sbjct: 24530 gccgctgcggatggaaccactgtgaccttagcttgacgattctgtaccgtaagcttcacg 24589
Query: 501 gtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatcttc 560
||||| || || || ||||| || || || ||||| ||||||||||| || |||||||||
Sbjct: 24590 gtgactcgaagacctttccattctttcgctgtctctttggcgatgtcttctccgatcttc 24649
Query: 561 ttcggggagagaccgagcgggccgatcttgggggccagcgacgacgccgcgccgacctcg 620
|| || | |||||||| || |||||||| || || || || ||||| || ||||||||
Sbjct: 24650 tttggtgccagaccgagtggaccgatctttggagcgagtgaagacgctgctccgacctca 24709
Query: 621 cctcc 625
|||||
Sbjct: 24710 cctcc 24714
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 97.6 bits (49), Expect = 2e-018
Identities = 196/245 (80%)
Strand = Plus / Plus
Query: 381 ttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacgagc 440
||||||||||| || |||||||| || ||||| || |||||||| || |||||||| ||
Sbjct: 21656581 ttgatgttcttcactttcttcctatctctctctggctccttgagggctttgatgactaga 21656640
Query: 441 gccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttgacg 500
||||| ||||| || || || | |||||| || || || ||||| || || ||||| |||
Sbjct: 21656641 gccgctgcggatggaaccactgtgaccttagcttgacgattctgtaccgtaagcttcacg 21656700
Query: 501 gtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatcttc 560
||||| || || || ||||| || || || ||||| ||||||||||| || |||||||||
Sbjct: 21656701 gtgactcgaagacctttccattctttcgctgtctctttggcgatgtcttctccgatcttc 21656760
Query: 561 ttcggggagagaccgagcgggccgatcttgggggccagcgacgacgccgcgccgacctcg 620
|| || | |||||||| || |||||||| || || || || ||||| || ||||||||
Sbjct: 21656761 tttggtgccagaccgagtggaccgatctttggagcgagtgaagacgctgctccgacctca 21656820
Query: 621 cctcc 625
|||||
Sbjct: 21656821 cctcc 21656825
>ref|NM_125460.2| Arabidopsis thaliana structural constituent of ribosome AT5G60670
mRNA, complete cds
Length = 684
Score = 97.6 bits (49), Expect = 2e-018
Identities = 196/245 (80%)
Strand = Plus / Minus
Query: 381 ttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacgagc 440
||||||||||| || |||||||| || ||||| || |||||||| || |||||||| ||
Sbjct: 326 ttgatgttcttcactttcttcctatctctctctggctccttgagggctttgatgactaga 267
Query: 441 gccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttgacg 500
||||| ||||| || || || | |||||| || || || ||||| || || ||||| |||
Sbjct: 266 gccgctgcggatggaaccactgtgaccttagcttgacgattctgtaccgtaagcttcacg 207
Query: 501 gtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatcttc 560
||||| || || || ||||| || || || ||||| ||||||||||| || |||||||||
Sbjct: 206 gtgactcgaagacctttccattctttcgctgtctctttggcgatgtcttctccgatcttc 147
Query: 561 ttcggggagagaccgagcgggccgatcttgggggccagcgacgacgccgcgccgacctcg 620
|| || | |||||||| || |||||||| || || || || ||||| || ||||||||
Sbjct: 146 tttggtgccagaccgagtggaccgatctttggagcgagtgaagacgctgctccgacctca 87
Query: 621 cctcc 625
|||||
Sbjct: 86 cctcc 82
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 97.6 bits (49), Expect = 2e-018
Identities = 196/245 (80%)
Strand = Plus / Plus
Query: 381 ttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacgagc 440
||||||||||| || |||||||| || ||||| || |||||||| || |||||||| ||
Sbjct: 24398494 ttgatgttcttcactttcttcctatctctctctggctccttgagggctttgatgactaga 24398553
Query: 441 gccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttgacg 500
||||| ||||| || || || | |||||| || || || ||||| || || ||||| |||
Sbjct: 24398554 gccgctgcggatggaaccactgtgaccttagcttgacgattctgtaccgtaagcttcacg 24398613
Query: 501 gtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatcttc 560
||||| || || || ||||| || || || ||||| ||||||||||| || |||||||||
Sbjct: 24398614 gtgactcgaagacctttccattctttcgctgtctctttggcgatgtcttctccgatcttc 24398673
Query: 561 ttcggggagagaccgagcgggccgatcttgggggccagcgacgacgccgcgccgacctcg 620
|| || | |||||||| || |||||||| || || || || ||||| || ||||||||
Sbjct: 24398674 tttggtgccagaccgagtggaccgatctttggagcgagtgaagacgctgctccgacctca 24398733
Query: 621 cctcc 625
|||||
Sbjct: 24398734 cctcc 24398738
>gb|AV782949.1|AV782949 AV782949 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-03-L24 3',
mRNA sequence
Length = 600
Score = 93.7 bits (47), Expect = 3e-017
Identities = 191/239 (79%)
Strand = Plus / Plus
Query: 381 ttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacgagc 440
||||||||||| || |||||||| || ||||| || |||||||| || |||||||| ||
Sbjct: 358 ttgatgttcttcactttcttcctatctctctctggctccttgagggctttgatgactaga 417
Query: 441 gccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttgacg 500
||||| ||||| || || || | |||||| || || || ||||| || || ||||| |||
Sbjct: 418 gccgctgcggatggaaccactgtgaccttagcttgacgattctgtaccgtaagcttcacg 477
Query: 501 gtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatcttc 560
||||| || || || ||||| || || || ||||| ||||||||||| || |||||||||
Sbjct: 478 gtgactcgaagacctttccattctttcgctgtctctttggcgatgtcttctccgatcttc 537
Query: 561 ttcggggagagaccgagcgggccgatcttgggggccagcgacgacgccgcgccgacctc 619
|| || | |||||||| || |||||||| || || || || ||||| || ||||||||
Sbjct: 538 tttggtgccagaccgagtggaccgatctttggagcgagtgaagacgctgctccgacctc 596
>gb|Z47613.1|Z47613 ATTS4469 AC16H Arabidopsis thaliana cDNA clone TAI258 5', mRNA
sequence
Length = 345
Score = 91.7 bits (46), Expect = 1e-016
Identities = 190/238 (79%)
Strand = Plus / Minus
Query: 381 ttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacgagc 440
||||||||||| || |||||||| || ||||| || |||||||| || |||||||| ||
Sbjct: 292 ttgatgttcttcactttcttcctatctctctctggctccttgagggctttgatgactaga 233
Query: 441 gccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttgacg 500
||||| ||||| || || || | |||||| || || || ||||| || || ||||| |||
Sbjct: 232 gccgctgcggatggaaccactgtgaccttagcttgacgattctgtaccgtaagcttcacg 173
Query: 501 gtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatcttc 560
||||| || || || ||||| || || || ||||| ||||||||||| || |||||||||
Sbjct: 172 gtgactcgaagacctttccattctttcgctgtctctttggcgatgtcttctccgatcttc 113
Query: 561 ttcggggagagaccgagcgggccgatcttgggggccagcgacgacgccgcgccgacct 618
|| || | |||||||| || |||||||| || || || || ||||| || |||||||
Sbjct: 112 tttggtgccagaccgagtggaccgatctttggagcgagtgaagacgctgctccgacct 55
>gb|T88600.1|T88600 12296 Lambda-PRL2 Arabidopsis thaliana cDNA clone 158K20T7, mRNA
sequence
Length = 430
Score = 91.7 bits (46), Expect = 1e-016
Identities = 168/209 (80%)
Strand = Plus / Minus
Query: 381 ttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacgagc 440
||||||||||| || |||||||| || ||||| || |||||||| || |||||||| ||
Sbjct: 316 ttgatgttcttcactttcttcctatctctctctggctccttgagggctttgatgactaga 257
Query: 441 gccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttgacg 500
||||| ||||| || || || | |||||| || || || ||||| || || ||||| |||
Sbjct: 256 gccgctgcggatggaaccactgtgaccttagcttgacgattctgtaccgtaagcttcacg 197
Query: 501 gtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatcttc 560
||||| || || || ||||| || || || ||||| ||||||||||| || |||||||||
Sbjct: 196 gtgactcgaagacctttccantctttcgctgtctctttggcgatgtcttctccgatcttc 137
Query: 561 ttcggggagagaccgagcgggccgatctt 589
|| || | |||||||| || ||||||||
Sbjct: 136 tttggtgccagaccgagtggaccgatctt 108
>gb|W43275.1|W43275 22654 Lambda-PRL2 Arabidopsis thaliana cDNA clone 249E8T7, mRNA
sequence
Length = 544
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 336 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 277
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 276 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 217
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 216 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 157
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 156 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 112
>gb|AI998344.1|AI998344 701545326 A. thaliana, Columbia Col-0, rosette-2 Arabidopsis
thaliana cDNA clone 701545326, mRNA sequence
Length = 574
Score = 89.7 bits (45), Expect = 5e-016
Identities = 196/245 (80%), Gaps = 1/245 (0%)
Strand = Plus / Plus
Query: 381 ttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacgagc 440
||||||||||| || |||||||| || ||||| || |||||||| || |||||||| ||
Sbjct: 330 ttgatgttcttcactttcttcctatctctctctggctccttgagggctttgatgactaga 389
Query: 441 gccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttgacg 500
||||| ||||| || || || | |||||| || || || ||||| || || ||||| |||
Sbjct: 390 gccgctgcggatggaaccactgtgaccttagcttgacgattctgtaccgtaagcttcacg 449
Query: 501 gtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatcttc 560
||||| || || || ||||| || || || ||||| ||||||||||| || |||||||||
Sbjct: 450 gtgactcgaagacctttccattctttcgctgtctctttggcgatgtcttctccgatcttc 509
Query: 561 ttcggggagagaccgagcgggccgatcttgggggccagcgacgacgccgcgccgacctcg 620
|| || | |||||||| || |||||||| || || || || ||||| || ||||||||
Sbjct: 510 tttggtg-cagaccgagtggaccgatctttggagcgagtgaagacgctgctccgacctca 568
Query: 621 cctcc 625
|||||
Sbjct: 569 cctcc 573
>gb|BE038784.1|BE038784 AB06G11 AB Arabidopsis thaliana cDNA 5' similar to 60s ribosomal
protein l12, mRNA sequence
Length = 709
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 366 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 307
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 306 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 247
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 246 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 187
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 186 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 142
>gb|AV824600.1|AV824600 AV824600 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-73-E06 5',
mRNA sequence
Length = 616
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 381 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 322
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 321 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 262
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 261 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 202
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 201 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 157
>gb|AV537468.1|AV537468 AV537468 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ06f11F 3', mRNA sequence
Length = 602
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Plus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 312 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 371
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 372 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 431
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 432 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 491
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 492 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 536
>gb|AV549360.1|AV549360 AV549360 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ06f11R 5', mRNA sequence
Length = 399
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 334 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 275
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 274 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 215
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 214 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 155
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 154 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 110
>gb|AV565172.1|AV565172 AV565172 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ218g11F 3', mRNA sequence
Length = 528
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 354 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 295
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 294 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 235
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 234 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 175
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 174 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 130
>gb|CK117662.1|CK117662 214j08.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011J08214
5-PRIME, mRNA sequence
Length = 749
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 376 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 317
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 316 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 257
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 256 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 197
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 196 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 152
>gb|CK117738.1|CK117738 213p15.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011P15213
5-PRIME, mRNA sequence
Length = 586
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 360 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 301
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 300 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 241
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 240 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 181
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 180 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 136
>gb|CK117746.1|CK117746 214c16.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011C16214
5-PRIME, mRNA sequence
Length = 737
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 375 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 316
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 315 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 256
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 255 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 196
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 195 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 151
>gb|CK118518.1|CK118518 216n18.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011N18216
5-PRIME, mRNA sequence
Length = 622
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 358 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 299
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 298 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 239
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 238 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 179
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 178 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 134
>gb|CK118659.1|CK118659 216g13.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011G13216
5-PRIME, mRNA sequence
Length = 494
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 369 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 310
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 309 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 250
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 249 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 190
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 189 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 145
>gb|CK118670.1|CK118670 216h01.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011H01216
5-PRIME, mRNA sequence
Length = 469
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 242 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 183
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 182 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 123
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 122 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 63
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 62 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 18
>gb|CK119105.1|CK119105 214h02.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011H02214
5-PRIME, mRNA sequence
Length = 641
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 376 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 317
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 316 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 257
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 256 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 197
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 196 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 152
>gb|CK119590.1|CK119590 211j12.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011J12211
5-PRIME, mRNA sequence
Length = 623
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 375 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 316
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 315 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 256
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 255 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 196
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 195 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 151
>gb|CK120530.1|CK120530 207d10.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011D10207
5-PRIME, mRNA sequence
Length = 729
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 330 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 271
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 270 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 211
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 210 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 151
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 150 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 106
>gb|CK120531.1|CK120531 207d12.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011D12207
5-PRIME, mRNA sequence
Length = 748
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 330 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 271
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 270 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 211
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 210 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 151
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 150 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 106
>gb|BP561242.2|BP561242 BP561242 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-69-L07 5',
mRNA sequence
Length = 482
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 383 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 324
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 323 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 264
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 263 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 204
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 203 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 159
>gb|BP818703.1|BP818703 BP818703 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-48-P08 5',
mRNA sequence
Length = 380
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 379 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 320
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 319 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 260
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 259 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 200
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 199 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 155
>gb|BP818831.1|BP818831 BP818831 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-49-F08 5',
mRNA sequence
Length = 401
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 388 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 329
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 328 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 269
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 268 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 209
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 208 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 164
>gb|BP823866.1|BP823866 BP823866 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-07-M19 5',
mRNA sequence
Length = 392
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 387 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 328
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 327 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 268
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 267 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 208
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 207 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 163
>gb|BP839073.1|BP839073 BP839073 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-25-O13 5',
mRNA sequence
Length = 419
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 367 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 308
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 307 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 248
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 247 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 188
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 187 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 143
>emb|AX364110.1| Sequence 117 from Patent WO0208410
Length = 630
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 285 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 226
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 225 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 166
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 165 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 106
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 105 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 61
>emb|AX366192.1| Sequence 111 from Patent WO0208411
Length = 630
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 285 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 226
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 225 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 166
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 165 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 106
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 105 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 61
>gb|AY140102.1| Arabidopsis thaliana 60S ribosomal protein L12-like protein
(At3g53430) mRNA, complete cds
Length = 715
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 389 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 330
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 329 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 270
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 269 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 210
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 209 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 165
>gb|BT002590.1| Arabidopsis thaliana 60S ribosomal protein L12-like protein
(At3g53430) mRNA, complete cds
Length = 548
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 315 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 256
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 255 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 196
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 195 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 136
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 135 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 91
>emb|AJ834880.1| Arabidopsis thaliana T-DNA flanking sequence, left border, clone
076E01
Length = 726
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 389 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 330
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 329 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 270
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 269 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 210
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 209 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 165
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Plus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 19773532 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 19773591
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 19773592 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 19773651
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 19773652 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 19773711
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 19773712 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 19773756
>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12
Length = 144628
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Plus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 50751 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 50810
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 50811 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 50870
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 50871 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 50930
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 50931 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 50975
>ref|NM_115203.2| Arabidopsis thaliana structural constituent of ribosome AT3G53430
mRNA, complete cds
Length = 783
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Minus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 389 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 330
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 329 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 270
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 269 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 210
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 209 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 165
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 89.7 bits (45), Expect = 5e-016
Identities = 180/225 (80%)
Strand = Plus / Plus
Query: 365 gatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgag 424
|||||| ||| | ||||| |||||||| |||||||| | ||| ||||| || ||||| |
Sbjct: 19821059 gatgttaccgttatgcttaatgttcttcaccttcttacggtctctctctggctccttcaa 19821118
Query: 425 cgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctg 484
||||||||||||||| || || || || || || |||| ||||| || || || |||||
Sbjct: 19821119 cgccttgatgacgagagctgcagcagatggaaccacggttaccttagcttgacgattctg 19821178
Query: 485 cacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgat 544
|| || ||||| |||||||| || || || ||||| || ||||| ||||| || |||||
Sbjct: 19821179 aaccgtcagcttcacggtgacacgaagtcctttccattctttggccgtctctttcgcgat 19821238
Query: 545 gtcctcgccgatcttcttcggggagagaccgagcgggccgatctt 589
||| || ||||||||||| || | ||||||||| || ||||||||
Sbjct: 19821239 gtcttctccgatcttctttggtgcgagaccgagaggaccgatctt 19821283
>gb|AV828348.1|AV828348 AV828348 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-27-A21 5',
mRNA sequence
Length = 471
Score = 87.7 bits (44), Expect = 2e-015
Identities = 170/212 (80%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||| | ||| ||||| || ||||| | |||||||||||||
Sbjct: 377 tgcttaatgttcttcaccttcttacggtctctctctggctccttcaacgccttgatgacg 318
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
|| || || || || || || |||| ||||| || || || ||||| || || |||||
Sbjct: 317 agagctgcagcagatggaaccacggttaccttagcttgacgattctgaaccgtcagcttc 258
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| || || || ||||| || ||||| ||||| || |||||||| || ||||||
Sbjct: 257 acggtgacacgaagtcctttccattctttggccgtctctttcgcgatgtcttctccgatc 198
Query: 558 ttcttcggggagagaccgagcgggccgatctt 589
||||| || | ||||||||| || ||||||||
Sbjct: 197 ttctttggtgcgagaccgagaggaccgatctt 166
>gb|BP830175.1|BP830175 BP830175 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-84-I07 5',
mRNA sequence
Length = 376
Score = 87.7 bits (44), Expect = 2e-015
Identities = 170/212 (80%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||| | ||| ||||| || ||||| | |||||||||||||
Sbjct: 355 tgcttaatgttcttcaccttcttacggtctctctctggctccttcaacgccttgatgacg 296
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
|| || || || || || || |||| ||||| || || || ||||| || || |||||
Sbjct: 295 agagctgcagcagatggaaccacggttaccttagcttgacgattctgaaccgtcagcttc 236
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| || || || ||||| || ||||| ||||| || |||||||| || ||||||
Sbjct: 235 acggtgacacgaagtcctttccattctttggccgtctctttcgcgatgtcttctccgatc 176
Query: 558 ttcttcggggagagaccgagcgggccgatctt 589
||||| || | ||||||||| || ||||||||
Sbjct: 175 ttctttggtgcgagaccgagaggaccgatctt 144
>gb|AV822246.1|AV822246 AV822246 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-03-L24 5',
mRNA sequence
Length = 560
Score = 85.7 bits (43), Expect = 8e-015
Identities = 194/245 (79%)
Strand = Plus / Minus
Query: 381 ttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacgagc 440
||||||| || || |||||||| || ||||| || |||||||| || |||||||| ||
Sbjct: 327 ttgatgtnnttcactttcttcctatctctctctggctccttgagggctttgatgactaga 268
Query: 441 gccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttgacg 500
||||| ||||| || || || | |||||| || || || ||||| || || ||||| |||
Sbjct: 267 gccgctgcggatggaaccactgtgaccttagcttgacgattctgtaccgtaagcttcacg 208
Query: 501 gtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatcttc 560
||||| || || || ||||| || || || ||||| ||||||||||| || |||||||||
Sbjct: 207 gtgactcgaagacctttccattctttcgctgtctctttggcgatgtcttctccgatcttc 148
Query: 561 ttcggggagagaccgagcgggccgatcttgggggccagcgacgacgccgcgccgacctcg 620
|| || | |||||||| || |||||||| || || || || ||||| || ||||||||
Sbjct: 147 tttggtgccagaccgagtggaccgatctttggagcgagtgaagacgctgctccgacctca 88
Query: 621 cctcc 625
|||||
Sbjct: 87 cctcc 83
>gb|BP820302.1|BP820302 BP820302 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-54-B19 5',
mRNA sequence
Length = 373
Score = 85.7 bits (43), Expect = 8e-015
Identities = 169/211 (80%)
Strand = Plus / Minus
Query: 379 gcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacga 438
|||| |||||||| |||||||| | ||| ||||| || ||||| | ||||||||||||||
Sbjct: 373 gcttaatgttcttcaccttcttacggtctctctctggctccttcaacgccttgatgacga 314
Query: 439 gcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttga 498
| || || || || || || |||| ||||| || || || ||||| || || ||||| |
Sbjct: 313 gagctgcagcagatggaaccacggttaccttagcttgacgattctgaaccgtcagcttca 254
Query: 499 cggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatct 558
||||||| || || || ||||| || ||||| ||||| || |||||||| || |||||||
Sbjct: 253 cggtgacacgaagtcctttccattctttggccgtctctttcgcgatgtcttctccgatct 194
Query: 559 tcttcggggagagaccgagcgggccgatctt 589
|||| || | ||||||||| || ||||||||
Sbjct: 193 tctttggtgcgagaccgagaggaccgatctt 163
>gb|N37629.1|N37629 18856 Lambda-PRL2 Arabidopsis thaliana cDNA clone 207F16T7, mRNA
sequence
Length = 469
Score = 83.8 bits (42), Expect = 3e-014
Identities = 167/209 (79%)
Strand = Plus / Minus
Query: 381 ttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacgagc 440
||||||| ||| || |||||||| || ||||| || |||||||| || |||||||| ||
Sbjct: 314 ttgatgtccttcactttcttcctatctctctctggctccttgagggctttgatgactaga 255
Query: 441 gccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttgacg 500
||||| ||||| || || || | |||||| || || || ||||| || || ||||| |||
Sbjct: 254 gccgctgcggatggaaccactgtgaccttagcttgacgattctgtaccgtaagcttcacg 195
Query: 501 gtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatcttc 560
||||| || || || ||||| || || || ||||| ||||||||||| || |||||||||
Sbjct: 194 gtgactcgaagacctttccantctttcgctgtctctttggcgatgtcttctccgatcttc 135
Query: 561 ttcggggagagaccgagcgggccgatctt 589
|| || | |||||||| || ||||||||
Sbjct: 134 tttggtgccagaccgagtggaccgatctt 106
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 218,364
Number of Sequences: 1013581
Number of extensions: 218364
Number of successful extensions: 16307
Number of sequences better than 0.5: 169
Number of HSP's better than 0.5 without gapping: 167
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 15642
Number of HSP's gapped (non-prelim): 615
length of query: 634
length of database: 908,940,872
effective HSP length: 20
effective length of query: 614
effective length of database: 888,669,252
effective search space: 545642920728
effective search space used: 545642920728
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)