BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716365.2.1
(936 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AI996119.1|AI996119 701550103 A. thaliana, Columbia Col-... 76 1e-011
gb|AV788423.1|AV788423 AV788423 RAFL6 Arabidopsis thaliana ... 76 1e-011
gb|BP585593.1|BP585593 BP585593 RAFL15 Arabidopsis thaliana... 76 1e-011
gb|AY063923.1| Arabidopsis thaliana putative protein kinase... 76 1e-011
gb|AY091248.1| Arabidopsis thaliana putative protein kinase... 76 1e-011
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 76 1e-011
emb|AL078465.1|ATT15N24 Arabidopsis thaliana DNA chromosome... 76 1e-011
emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosom... 76 1e-011
ref|NM_118795.2| Arabidopsis thaliana kinase AT4G26610 mRNA... 76 1e-011
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 76 1e-011
gb|BP633987.1|BP633987 BP633987 RAFL17 Arabidopsis thaliana... 70 8e-010
emb|AX507823.1| Sequence 2518 from Patent WO0216655 70 8e-010
gb|BT010571.1| Arabidopsis thaliana At3g27580 gene, complet... 70 8e-010
dbj|D10910.1|ATHATPK Arabidopsis thaliana Atpk7 gene for se... 70 8e-010
dbj|AB025626.1| Arabidopsis thaliana genomic DNA, chromosom... 70 8e-010
dbj|AK175529.1| Arabidopsis thaliana mRNA for serine/threon... 70 8e-010
dbj|AK176399.1| Arabidopsis thaliana mRNA for serine/threon... 70 8e-010
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 70 8e-010
ref|NM_113674.2| Arabidopsis thaliana ATPK7; kinase AT3G275... 70 8e-010
ref|NM_001035707.1| Arabidopsis thaliana ATPK7; kinase AT3G... 70 8e-010
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 70 8e-010
gb|AY054227.1| Arabidopsis thaliana AT5g47750/MCA23_7 mRNA,... 68 3e-009
gb|AY113177.1| Arabidopsis thaliana AT5g47750/MCA23_7 mRNA,... 68 3e-009
dbj|D10909.1|ATHPK5 Arabidopsis thaliana gene for serine/th... 68 3e-009
dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosom... 68 3e-009
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 68 3e-009
ref|NM_124149.2| Arabidopsis thaliana kinase AT5G47750 mRNA... 68 3e-009
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 68 3e-009
gb|B29006.1|B29006 T23M18TR TAMU Arabidopsis thaliana genom... 66 1e-008
gb|B29138.1|B29138 T27C20TF TAMU Arabidopsis thaliana genom... 66 1e-008
gb|B78430.1|B78430 T27C20TF.1 TAMU Arabidopsis thaliana gen... 66 1e-008
gb|AA042649.1|AA042649 24945 CD4-13 Arabidopsis thaliana cD... 66 1e-008
gb|CB260202.1|CB260202 86-E9535-013-002-K21-T7R MPIZ-ADIS-0... 66 1e-008
gb|AY062501.1| Arabidopsis thaliana protein kinase 5 (MCA23... 66 1e-008
gb|AY078927.1| Arabidopsis thaliana At2g44830/T13E15.16 mRN... 66 1e-008
gb|AY093303.1| Arabidopsis thaliana protein kinase 5 (MCA23... 66 1e-008
gb|AC002388.3| Arabidopsis thaliana chromosome 2 clone T13E... 66 1e-008
ref|NM_180095.1| Arabidopsis thaliana kinase AT2G44830 mRNA... 66 1e-008
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 66 1e-008
gb|AV565592.1|AV565592 AV565592 Arabidopsis thaliana green ... 62 2e-007
gb|BP598074.1|BP598074 BP598074 RAFL16 Arabidopsis thaliana... 62 2e-007
gb|BP610162.1|BP610162 BP610162 RAFL16 Arabidopsis thaliana... 62 2e-007
gb|BP611242.1|BP611242 BP611242 RAFL16 Arabidopsis thaliana... 62 2e-007
gb|BP612233.1|BP612233 BP612233 RAFL16 Arabidopsis thaliana... 62 2e-007
gb|BP616826.1|BP616826 BP616826 RAFL16 Arabidopsis thaliana... 62 2e-007
gb|BP618438.1|BP618438 BP618438 RAFL16 Arabidopsis thaliana... 62 2e-007
gb|BP624364.1|BP624364 BP624364 RAFL17 Arabidopsis thaliana... 62 2e-007
gb|BP649445.1|BP649445 BP649445 RAFL19 Arabidopsis thaliana... 62 2e-007
emb|AX506135.1| Sequence 830 from Patent WO0216655 62 2e-007
emb|BX833587.1|CNS0A0GL Arabidopsis thaliana Full-length cD... 62 2e-007
emb|BX830203.1|CNS0A26F Arabidopsis thaliana Full-length cD... 62 2e-007
emb|BX830414.1|CNS0A26H Arabidopsis thaliana Full-length cD... 62 2e-007
dbj|AB026659.1| Arabidopsis thaliana genomic DNA, chromosom... 62 2e-007
dbj|D10937.1|ATHATPK64 Arabidopsis thaliana ATPK64 mRNA for... 62 2e-007
ref|NM_124973.3| Arabidopsis thaliana kinase AT5G55910 mRNA... 62 2e-007
gb|BP616103.1|BP616103 BP616103 RAFL16 Arabidopsis thaliana... 56 1e-005
gb|AV564555.1|AV564555 AV564555 Arabidopsis thaliana green ... 54 4e-005
gb|BP587252.1|BP587252 BP587252 RAFL15 Arabidopsis thaliana... 54 4e-005
gb|BP588466.1|BP588466 BP588466 RAFL15 Arabidopsis thaliana... 54 4e-005
gb|BP594863.1|BP594863 BP594863 RAFL15 Arabidopsis thaliana... 54 4e-005
gb|BP604903.1|BP604903 BP604903 RAFL16 Arabidopsis thaliana... 54 4e-005
gb|BP605202.1|BP605202 BP605202 RAFL16 Arabidopsis thaliana... 54 4e-005
gb|BP612466.1|BP612466 BP612466 RAFL16 Arabidopsis thaliana... 52 2e-004
gb|CF772922.1|CF772922 AG_FSL_10A06 Arabidopsis ag-1 35S:AG... 50 7e-004
gb|BP563121.1|BP563121 BP563121 RAFL13 Arabidopsis thaliana... 50 7e-004
ref|NM_124148.2| Arabidopsis thaliana unknown protein AT5G4... 50 7e-004
gb|AA041115.1|AA041115 24381 CD4-13 Arabidopsis thaliana cD... 48 0.003
emb|BX942962.1| Arabidopsis thaliana T-DNA flanking sequenc... 46 0.011
emb|CT026263.1| Arabidopsis thaliana T-DNA flanking sequenc... 46 0.011
gb|H36204.1|H36204 14726 Lambda-PRL2 Arabidopsis thaliana c... 46 0.011
gb|AU228783.1|AU228783 AU228783 RAFL16 Arabidopsis thaliana... 46 0.011
gb|BP619419.1|BP619419 BP619419 RAFL16 Arabidopsis thaliana... 46 0.011
gb|AC003105.3| Arabidopsis thaliana chromosome 2 clone F18A... 46 0.011
dbj|AB024033.1| Arabidopsis thaliana genomic DNA, chromosom... 46 0.011
gb|BT011689.1| Arabidopsis thaliana At3g12690 gene, complet... 46 0.011
gb|AY705432.1| Arabidopsis thaliana AGC1-10 (AGC1-10) gene,... 46 0.011
gb|AY705433.1| Arabidopsis thaliana AGC1-10 (AGC1-10) mRNA,... 46 0.011
gb|BT020332.1| Arabidopsis thaliana At3g12690 gene, complet... 46 0.011
ref|NM_112105.2| Arabidopsis thaliana kinase AT3G12690 tran... 46 0.011
ref|NM_128227.3| Arabidopsis thaliana ATP binding / kinase/... 46 0.011
ref|NM_202566.1| Arabidopsis thaliana kinase AT3G12690 tran... 46 0.011
ref|NM_202567.1| Arabidopsis thaliana kinase AT3G12690 tran... 46 0.011
emb|AL162506.1|ATF17C15 Arabidopsis thaliana DNA chromosome... 44 0.043
ref|NM_120445.1| Arabidopsis thaliana kinase AT5G03640 mRNA... 44 0.043
>gb|AI996119.1|AI996119 701550103 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701550103, mRNA sequence
Length = 408
Score = 75.8 bits (38), Expect = 1e-011
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
||||||||||| || ||||||||||| || || || || || || || || |||||||||
Sbjct: 235 aatgcccaattcactccttcaaagaaaggatgttgcttcatctcagttgcaccacgctta 294
Query: 444 tacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagca 503
|||||||||| ||||||||| || || | |||| | |||||| | |||||| ||||||
Sbjct: 295 tacgctaatctatgctgaggctctttcacaagcagactcctaatcaaatccctagcagca 354
Query: 504 aaactcactacaggtgattctgggaa 529
||||| || || || |||||||||||
Sbjct: 355 aaactgacaactggagattctgggaa 380
>gb|AV788423.1|AV788423 AV788423 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-79-H24 3',
mRNA sequence
Length = 418
Score = 75.8 bits (38), Expect = 1e-011
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
||||||||||| || ||||||||||| || || || || || || || || |||||||||
Sbjct: 265 aatgcccaattcactccttcaaagaaaggatgttgcttcatctcagttgcaccacgctta 324
Query: 444 tacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagca 503
|||||||||| ||||||||| || || | |||| | |||||| | |||||| ||||||
Sbjct: 325 tacgctaatctatgctgaggctctttcacaagcagactcctaatcaaatccctagcagca 384
Query: 504 aaactcactacaggtgattctgggaa 529
||||| || || || |||||||||||
Sbjct: 385 aaactgacaactggagattctgggaa 410
>gb|BP585593.1|BP585593 BP585593 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-03-C09 3',
mRNA sequence
Length = 449
Score = 75.8 bits (38), Expect = 1e-011
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
||||||||||| || ||||||||||| || || || || || || || || |||||||||
Sbjct: 229 aatgcccaattcactccttcaaagaaaggatgttgcttcatctcagttgcaccacgctta 288
Query: 444 tacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagca 503
|||||||||| ||||||||| || || | |||| | |||||| | |||||| ||||||
Sbjct: 289 tacgctaatctatgctgaggctctttcacaagcagactcctaatcaaatccctagcagca 348
Query: 504 aaactcactacaggtgattctgggaa 529
||||| || || || |||||||||||
Sbjct: 349 aaactgacaactggagattctgggaa 374
>gb|AY063923.1| Arabidopsis thaliana putative protein kinase (At4g26610) mRNA,
complete cds
Length = 1960
Score = 75.8 bits (38), Expect = 1e-011
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
||||||||||| || ||||||||||| || || || || || || || || |||||||||
Sbjct: 1680 aatgcccaattcactccttcaaagaaaggatgttgcttcatctcagttgcaccacgctta 1621
Query: 444 tacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagca 503
|||||||||| ||||||||| || || | |||| | |||||| | |||||| ||||||
Sbjct: 1620 tacgctaatctatgctgaggctctttcacaagcagactcctaatcaaatccctagcagca 1561
Query: 504 aaactcactacaggtgattctgggaa 529
||||| || || || |||||||||||
Sbjct: 1560 aaactgacaactggagattctgggaa 1535
Score = 61.9 bits (31), Expect = 2e-007
Identities = 88/107 (82%)
Strand = Plus / Minus
Query: 606 agctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgccc 665
||||||||||| || || ||||| |||||||| || || ||||| |||||||| || ||
Sbjct: 1458 agctcatacaaaaagatcccaaaagtccaccaatcaaccgcactcccatgcccttcacct 1399
Query: 666 tttataatttcaggtgccaagtactcatgggtgccaacaaaagacat 712
|| || || ||||| || || |||||||| ||||||||||| |||||
Sbjct: 1398 ttgatgatctcaggagctaaatactcatgtgtgccaacaaatgacat 1352
>gb|AY091248.1| Arabidopsis thaliana putative protein kinase (At4g26610) mRNA,
complete cds
Length = 1552
Score = 75.8 bits (38), Expect = 1e-011
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
||||||||||| || ||||||||||| || || || || || || || || |||||||||
Sbjct: 1388 aatgcccaattcactccttcaaagaaaggatgttgcttcatctcagttgcaccacgctta 1329
Query: 444 tacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagca 503
|||||||||| ||||||||| || || | |||| | |||||| | |||||| ||||||
Sbjct: 1328 tacgctaatctatgctgaggctctttcacaagcagactcctaatcaaatccctagcagca 1269
Query: 504 aaactcactacaggtgattctgggaa 529
||||| || || || |||||||||||
Sbjct: 1268 aaactgacaactggagattctgggaa 1243
Score = 61.9 bits (31), Expect = 2e-007
Identities = 88/107 (82%)
Strand = Plus / Minus
Query: 606 agctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgccc 665
||||||||||| || || ||||| |||||||| || || ||||| |||||||| || ||
Sbjct: 1166 agctcatacaaaaagatcccaaaagtccaccaatcaaccgcactcccatgcccttcacct 1107
Query: 666 tttataatttcaggtgccaagtactcatgggtgccaacaaaagacat 712
|| || || ||||| || || |||||||| ||||||||||| |||||
Sbjct: 1106 ttgatgatctcaggagctaaatactcatgtgtgccaacaaatgacat 1060
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 75.8 bits (38), Expect = 1e-011
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
||||||||||| || ||||||||||| || || || || || || || || |||||||||
Sbjct: 9339829 aatgcccaattcactccttcaaagaaaggatgttgcttcatctcagttgcaccacgctta 9339770
Query: 444 tacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagca 503
|||||||||| ||||||||| || || | |||| | |||||| | |||||| ||||||
Sbjct: 9339769 tacgctaatctatgctgaggctctttcacaagcagactcctaatcaaatccctagcagca 9339710
Query: 504 aaactcactacaggtgattctgggaa 529
||||| || || || |||||||||||
Sbjct: 9339709 aaactgacaactggagattctgggaa 9339684
Score = 61.9 bits (31), Expect = 2e-007
Identities = 88/107 (82%)
Strand = Plus / Minus
Query: 606 agctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgccc 665
||||||||||| || || ||||| |||||||| || || ||||| |||||||| || ||
Sbjct: 9339607 agctcatacaaaaagatcccaaaagtccaccaatcaaccgcactcccatgcccttcacct 9339548
Query: 666 tttataatttcaggtgccaagtactcatgggtgccaacaaaagacat 712
|| || || ||||| || || |||||||| ||||||||||| |||||
Sbjct: 9339547 ttgatgatctcaggagctaaatactcatgtgtgccaacaaatgacat 9339501
>emb|AL078465.1|ATT15N24 Arabidopsis thaliana DNA chromosome 4, BAC clone T15N24 (ESSA project)
Length = 92657
Score = 75.8 bits (38), Expect = 1e-011
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
||||||||||| || ||||||||||| || || || || || || || || |||||||||
Sbjct: 56098 aatgcccaattcactccttcaaagaaaggatgttgcttcatctcagttgcaccacgctta 56039
Query: 444 tacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagca 503
|||||||||| ||||||||| || || | |||| | |||||| | |||||| ||||||
Sbjct: 56038 tacgctaatctatgctgaggctctttcacaagcagactcctaatcaaatccctagcagca 55979
Query: 504 aaactcactacaggtgattctgggaa 529
||||| || || || |||||||||||
Sbjct: 55978 aaactgacaactggagattctgggaa 55953
Score = 61.9 bits (31), Expect = 2e-007
Identities = 88/107 (82%)
Strand = Plus / Minus
Query: 606 agctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgccc 665
||||||||||| || || ||||| |||||||| || || ||||| |||||||| || ||
Sbjct: 55876 agctcatacaaaaagatcccaaaagtccaccaatcaaccgcactcccatgcccttcacct 55817
Query: 666 tttataatttcaggtgccaagtactcatgggtgccaacaaaagacat 712
|| || || ||||| || || |||||||| ||||||||||| |||||
Sbjct: 55816 ttgatgatctcaggagctaaatactcatgtgtgccaacaaatgacat 55770
>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65
Length = 198320
Score = 75.8 bits (38), Expect = 1e-011
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
||||||||||| || ||||||||||| || || || || || || || || |||||||||
Sbjct: 124230 aatgcccaattcactccttcaaagaaaggatgttgcttcatctcagttgcaccacgctta 124171
Query: 444 tacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagca 503
|||||||||| ||||||||| || || | |||| | |||||| | |||||| ||||||
Sbjct: 124170 tacgctaatctatgctgaggctctttcacaagcagactcctaatcaaatccctagcagca 124111
Query: 504 aaactcactacaggtgattctgggaa 529
||||| || || || |||||||||||
Sbjct: 124110 aaactgacaactggagattctgggaa 124085
Score = 61.9 bits (31), Expect = 2e-007
Identities = 88/107 (82%)
Strand = Plus / Minus
Query: 606 agctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgccc 665
||||||||||| || || ||||| |||||||| || || ||||| |||||||| || ||
Sbjct: 124008 agctcatacaaaaagatcccaaaagtccaccaatcaaccgcactcccatgcccttcacct 123949
Query: 666 tttataatttcaggtgccaagtactcatgggtgccaacaaaagacat 712
|| || || ||||| || || |||||||| ||||||||||| |||||
Sbjct: 123948 ttgatgatctcaggagctaaatactcatgtgtgccaacaaatgacat 123902
>ref|NM_118795.2| Arabidopsis thaliana kinase AT4G26610 mRNA, complete cds
Length = 1943
Score = 75.8 bits (38), Expect = 1e-011
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
||||||||||| || ||||||||||| || || || || || || || || |||||||||
Sbjct: 1680 aatgcccaattcactccttcaaagaaaggatgttgcttcatctcagttgcaccacgctta 1621
Query: 444 tacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagca 503
|||||||||| ||||||||| || || | |||| | |||||| | |||||| ||||||
Sbjct: 1620 tacgctaatctatgctgaggctctttcacaagcagactcctaatcaaatccctagcagca 1561
Query: 504 aaactcactacaggtgattctgggaa 529
||||| || || || |||||||||||
Sbjct: 1560 aaactgacaactggagattctgggaa 1535
Score = 61.9 bits (31), Expect = 2e-007
Identities = 88/107 (82%)
Strand = Plus / Minus
Query: 606 agctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgccc 665
||||||||||| || || ||||| |||||||| || || ||||| |||||||| || ||
Sbjct: 1458 agctcatacaaaaagatcccaaaagtccaccaatcaaccgcactcccatgcccttcacct 1399
Query: 666 tttataatttcaggtgccaagtactcatgggtgccaacaaaagacat 712
|| || || ||||| || || |||||||| ||||||||||| |||||
Sbjct: 1398 ttgatgatctcaggagctaaatactcatgtgtgccaacaaatgacat 1352
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 75.8 bits (38), Expect = 1e-011
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
||||||||||| || ||||||||||| || || || || || || || || |||||||||
Sbjct: 13427061 aatgcccaattcactccttcaaagaaaggatgttgcttcatctcagttgcaccacgctta 13427002
Query: 444 tacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagca 503
|||||||||| ||||||||| || || | |||| | |||||| | |||||| ||||||
Sbjct: 13427001 tacgctaatctatgctgaggctctttcacaagcagactcctaatcaaatccctagcagca 13426942
Query: 504 aaactcactacaggtgattctgggaa 529
||||| || || || |||||||||||
Sbjct: 13426941 aaactgacaactggagattctgggaa 13426916
Score = 61.9 bits (31), Expect = 2e-007
Identities = 88/107 (82%)
Strand = Plus / Minus
Query: 606 agctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgccc 665
||||||||||| || || ||||| |||||||| || || ||||| |||||||| || ||
Sbjct: 13426839 agctcatacaaaaagatcccaaaagtccaccaatcaaccgcactcccatgcccttcacct 13426780
Query: 666 tttataatttcaggtgccaagtactcatgggtgccaacaaaagacat 712
|| || || ||||| || || |||||||| ||||||||||| |||||
Sbjct: 13426779 ttgatgatctcaggagctaaatactcatgtgtgccaacaaatgacat 13426733
>gb|BP633987.1|BP633987 BP633987 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-32-N02 3',
mRNA sequence
Length = 435
Score = 69.9 bits (35), Expect = 8e-010
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
|||||||| || ||||||||||| || || || ||||| ||||||||||||||||||||
Sbjct: 311 gcccaattcactccttcaaagaaaggatgttgctttatctctgtggctccacgcttataa 370
Query: 447 gctaatc 453
|||||||
Sbjct: 371 gctaatc 377
>emb|AX507823.1| Sequence 2518 from Patent WO0216655
Length = 1737
Score = 69.9 bits (35), Expect = 8e-010
Identities = 98/119 (82%)
Strand = Plus / Minus
Query: 603 agaagctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcg 662
||||||||||| | |||||| || |||||||||||||| || || |||||||| || ||
Sbjct: 1349 agaagctcatagaggaatatcccgaatgtccaccagtcaaccgcgcttccatgaccttct 1290
Query: 663 ccctttataatttcaggtgccaagtactcatgggtgccaacaaaagacatagaccttgc 721
|| || ||||| || ||||| | |||||| || || |||||||| ||||| ||||||||
Sbjct: 1289 cctttgataatctctggtgctaggtactcgtgtgtaccaacaaacgacattgaccttgc 1231
>gb|BT010571.1| Arabidopsis thaliana At3g27580 gene, complete cds
Length = 1737
Score = 69.9 bits (35), Expect = 8e-010
Identities = 98/119 (82%)
Strand = Plus / Minus
Query: 603 agaagctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcg 662
||||||||||| | |||||| || |||||||||||||| || || |||||||| || ||
Sbjct: 1349 agaagctcatagaggaatatcccgaatgtccaccagtcaaccgcgcttccatgaccttct 1290
Query: 663 ccctttataatttcaggtgccaagtactcatgggtgccaacaaaagacatagaccttgc 721
|| || ||||| || ||||| | |||||| || || |||||||| ||||| ||||||||
Sbjct: 1289 cctttgataatctctggtgctaggtactcgtgtgtaccaacaaacgacattgaccttgc 1231
>dbj|D10910.1|ATHATPK Arabidopsis thaliana Atpk7 gene for serine/threonine protein kinase,
complete cds
Length = 4719
Score = 69.9 bits (35), Expect = 8e-010
Identities = 98/119 (82%)
Strand = Plus / Minus
Query: 603 agaagctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcg 662
||||||||||| | |||||| || |||||||||||||| || || |||||||| || ||
Sbjct: 2886 agaagctcatagaggaatatcccgaatgtccaccagtcaaccgcgcttccatgaccttct 2827
Query: 663 ccctttataatttcaggtgccaagtactcatgggtgccaacaaaagacatagaccttgc 721
|| || ||||| || ||||| | |||||| || || |||||||| ||||| ||||||||
Sbjct: 2826 cctttgataatctctggtgctaggtactcgtgtgtaccaacaaacgacattgaccttgc 2768
>dbj|AB025626.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MMJ24
Length = 54452
Score = 69.9 bits (35), Expect = 8e-010
Identities = 98/119 (82%)
Strand = Plus / Plus
Query: 603 agaagctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcg 662
||||||||||| | |||||| || |||||||||||||| || || |||||||| || ||
Sbjct: 47372 agaagctcatagaggaatatcccgaatgtccaccagtcaaccgcgcttccatgaccttct 47431
Query: 663 ccctttataatttcaggtgccaagtactcatgggtgccaacaaaagacatagaccttgc 721
|| || ||||| || ||||| | |||||| || || |||||||| ||||| ||||||||
Sbjct: 47432 cctttgataatctctggtgctaggtactcgtgtgtaccaacaaacgacattgaccttgc 47490
>dbj|AK175529.1| Arabidopsis thaliana mRNA for serine/threonine-protein kinase PK7,
complete cds, clone: RAFL21-94-N11
Length = 2124
Score = 69.9 bits (35), Expect = 8e-010
Identities = 98/119 (82%)
Strand = Plus / Minus
Query: 603 agaagctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcg 662
||||||||||| | |||||| || |||||||||||||| || || |||||||| || ||
Sbjct: 1534 agaagctcatagaggaatatcccgaatgtccaccagtcaaccgcgcttccatgaccttct 1475
Query: 663 ccctttataatttcaggtgccaagtactcatgggtgccaacaaaagacatagaccttgc 721
|| || ||||| || ||||| | |||||| || || |||||||| ||||| ||||||||
Sbjct: 1474 cctttgataatctctggtgctaggtactcgtgtgtaccaacaaacgacattgaccttgc 1416
>dbj|AK176399.1| Arabidopsis thaliana mRNA for serine/threonine-protein kinase, PK7,
complete cds, clone: RAFL24-11-A01
Length = 2483
Score = 69.9 bits (35), Expect = 8e-010
Identities = 98/119 (82%)
Strand = Plus / Minus
Query: 603 agaagctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcg 662
||||||||||| | |||||| || |||||||||||||| || || |||||||| || ||
Sbjct: 1841 agaagctcatagaggaatatcccgaatgtccaccagtcaaccgcgcttccatgaccttct 1782
Query: 663 ccctttataatttcaggtgccaagtactcatgggtgccaacaaaagacatagaccttgc 721
|| || ||||| || ||||| | |||||| || || |||||||| ||||| ||||||||
Sbjct: 1781 cctttgataatctctggtgctaggtactcgtgtgtaccaacaaacgacattgaccttgc 1723
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 69.9 bits (35), Expect = 8e-010
Identities = 98/119 (82%)
Strand = Plus / Plus
Query: 603 agaagctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcg 662
||||||||||| | |||||| || |||||||||||||| || || |||||||| || ||
Sbjct: 10152029 agaagctcatagaggaatatcccgaatgtccaccagtcaaccgcgcttccatgaccttct 10152088
Query: 663 ccctttataatttcaggtgccaagtactcatgggtgccaacaaaagacatagaccttgc 721
|| || ||||| || ||||| | |||||| || || |||||||| ||||| ||||||||
Sbjct: 10152089 cctttgataatctctggtgctaggtactcgtgtgtaccaacaaacgacattgaccttgc 10152147
Score = 46.1 bits (23), Expect = 0.011
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 606 agctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgcc 664
|||||||| | ||| || || |||||||||||||| ||||| || ||||| ||||||||
Sbjct: 4026914 agctcataaaggaagatcccgaatgtccaccagtccacagcgctgccatgtccctcgcc 4026972
Score = 46.1 bits (23), Expect = 0.011
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggc 433
|||||||| || ||||||||||| ||||| || ||||| ||||||||
Sbjct: 4026695 gcccaattcactccttcaaagaaagggtgttgctttatctctgtggc 4026741
>ref|NM_113674.2| Arabidopsis thaliana ATPK7; kinase AT3G27580 (ATPK7) transcript
variant AT3G27580.1 mRNA, complete cds
Length = 1737
Score = 69.9 bits (35), Expect = 8e-010
Identities = 98/119 (82%)
Strand = Plus / Minus
Query: 603 agaagctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcg 662
||||||||||| | |||||| || |||||||||||||| || || |||||||| || ||
Sbjct: 1349 agaagctcatagaggaatatcccgaatgtccaccagtcaaccgcgcttccatgaccttct 1290
Query: 663 ccctttataatttcaggtgccaagtactcatgggtgccaacaaaagacatagaccttgc 721
|| || ||||| || ||||| | |||||| || || |||||||| ||||| ||||||||
Sbjct: 1289 cctttgataatctctggtgctaggtactcgtgtgtaccaacaaacgacattgaccttgc 1231
>ref|NM_001035707.1| Arabidopsis thaliana ATPK7; kinase AT3G27580 (ATPK7) transcript
variant AT3G27580.2 mRNA, complete cds
Length = 2473
Score = 69.9 bits (35), Expect = 8e-010
Identities = 98/119 (82%)
Strand = Plus / Minus
Query: 603 agaagctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcg 662
||||||||||| | |||||| || |||||||||||||| || || |||||||| || ||
Sbjct: 1841 agaagctcatagaggaatatcccgaatgtccaccagtcaaccgcgcttccatgaccttct 1782
Query: 663 ccctttataatttcaggtgccaagtactcatgggtgccaacaaaagacatagaccttgc 721
|| || ||||| || ||||| | |||||| || || |||||||| ||||| ||||||||
Sbjct: 1781 cctttgataatctctggtgctaggtactcgtgtgtaccaacaaacgacattgaccttgc 1723
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 69.9 bits (35), Expect = 8e-010
Identities = 98/119 (82%)
Strand = Plus / Plus
Query: 603 agaagctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcg 662
||||||||||| | |||||| || |||||||||||||| || || |||||||| || ||
Sbjct: 10219296 agaagctcatagaggaatatcccgaatgtccaccagtcaaccgcgcttccatgaccttct 10219355
Query: 663 ccctttataatttcaggtgccaagtactcatgggtgccaacaaaagacatagaccttgc 721
|| || ||||| || ||||| | |||||| || || |||||||| ||||| ||||||||
Sbjct: 10219356 cctttgataatctctggtgctaggtactcgtgtgtaccaacaaacgacattgaccttgc 10219414
Score = 46.1 bits (23), Expect = 0.011
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 606 agctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgcc 664
|||||||| | ||| || || |||||||||||||| ||||| || ||||| ||||||||
Sbjct: 4031012 agctcataaaggaagatcccgaatgtccaccagtccacagcgctgccatgtccctcgcc 4031070
Score = 46.1 bits (23), Expect = 0.011
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggc 433
|||||||| || ||||||||||| ||||| || ||||| ||||||||
Sbjct: 4030793 gcccaattcactccttcaaagaaagggtgttgctttatctctgtggc 4030839
>gb|AY054227.1| Arabidopsis thaliana AT5g47750/MCA23_7 mRNA, complete cds
Length = 2143
Score = 67.9 bits (34), Expect = 3e-009
Identities = 109/134 (81%)
Strand = Plus / Minus
Query: 600 aagagaagctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccc 659
||||||||||| || | |||||| ||||| |||||||| || || ||||| ||||||||
Sbjct: 1573 aagagaagctcgtaaaggaatatcccaaaagtccaccaatccactgcactgccatgccct 1514
Query: 660 tcgccctttataatttcaggtgccaagtactcatgggtgccaacaaaagacatagacctt 719
||||| || || || || || ||||||||||| || ||||| ||||| ||||| || | |
Sbjct: 1513 tcgcctttgatgatctctggggccaagtactcgtgtgtgcccacaaatgacatggaacgt 1454
Query: 720 gcatctgtcggctc 733
||||| || |||||
Sbjct: 1453 gcatcggttggctc 1440
>gb|AY113177.1| Arabidopsis thaliana AT5g47750/MCA23_7 mRNA, complete cds
Length = 1761
Score = 67.9 bits (34), Expect = 3e-009
Identities = 109/134 (81%)
Strand = Plus / Minus
Query: 600 aagagaagctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccc 659
||||||||||| || | |||||| ||||| |||||||| || || ||||| ||||||||
Sbjct: 1385 aagagaagctcgtaaaggaatatcccaaaagtccaccaatccactgcactgccatgccct 1326
Query: 660 tcgccctttataatttcaggtgccaagtactcatgggtgccaacaaaagacatagacctt 719
||||| || || || || || ||||||||||| || ||||| ||||| ||||| || | |
Sbjct: 1325 tcgcctttgatgatctctggggccaagtactcgtgtgtgcccacaaatgacatggaacgt 1266
Query: 720 gcatctgtcggctc 733
||||| || |||||
Sbjct: 1265 gcatcggttggctc 1252
>dbj|D10909.1|ATHPK5 Arabidopsis thaliana gene for serine/threonine protein kinase,
complete cds
Length = 4059
Score = 67.9 bits (34), Expect = 3e-009
Identities = 109/134 (81%)
Strand = Plus / Minus
Query: 600 aagagaagctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccc 659
||||||||||| || | |||||| ||||| |||||||| || || ||||| ||||||||
Sbjct: 3574 aagagaagctcgtaaaggaatatcccaaaagtccaccaatccactgcactgccatgccct 3515
Query: 660 tcgccctttataatttcaggtgccaagtactcatgggtgccaacaaaagacatagacctt 719
||||| || || || || || ||||||||||| || ||||| ||||| ||||| || | |
Sbjct: 3514 tcgcctttgatgatctctggggccaagtactcgtgtgtgcccacaaatgacatggaacgt 3455
Query: 720 gcatctgtcggctc 733
||||| || |||||
Sbjct: 3454 gcatcggttggctc 3441
>dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCA23
Length = 82503
Score = 67.9 bits (34), Expect = 3e-009
Identities = 109/134 (81%)
Strand = Plus / Plus
Query: 600 aagagaagctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccc 659
||||||||||| || | |||||| ||||| |||||||| || || ||||| ||||||||
Sbjct: 17556 aagagaagctcgtaaaggaatatcccaaaagtccaccaatccactgcactgccatgccct 17615
Query: 660 tcgccctttataatttcaggtgccaagtactcatgggtgccaacaaaagacatagacctt 719
||||| || || || || || ||||||||||| || ||||| ||||| ||||| || | |
Sbjct: 17616 tcgcctttgatgatctctggggccaagtactcgtgtgtgcccacaaatgacatggaacgt 17675
Query: 720 gcatctgtcggctc 733
||||| || |||||
Sbjct: 17676 gcatcggttggctc 17689
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 67.9 bits (34), Expect = 3e-009
Identities = 109/134 (81%)
Strand = Plus / Plus
Query: 600 aagagaagctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccc 659
||||||||||| || | |||||| ||||| |||||||| || || ||||| ||||||||
Sbjct: 17480450 aagagaagctcgtaaaggaatatcccaaaagtccaccaatccactgcactgccatgccct 17480509
Query: 660 tcgccctttataatttcaggtgccaagtactcatgggtgccaacaaaagacatagacctt 719
||||| || || || || || ||||||||||| || ||||| ||||| ||||| || | |
Sbjct: 17480510 tcgcctttgatgatctctggggccaagtactcgtgtgtgcccacaaatgacatggaacgt 17480569
Query: 720 gcatctgtcggctc 733
||||| || |||||
Sbjct: 17480570 gcatcggttggctc 17480583
Score = 44.1 bits (22), Expect = 0.043
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 579 cctttgaatggtgtcttgccgaagagaagctcatacaagaatatgccaaatgtccaccag 638
||||||||||| || || ||| | ||||||||||| | || || |||||||||||||||
Sbjct: 930015 cctttgaatggagttttcccgtaaagaagctcatatagaaagatcccaaatgtccaccag 929956
Query: 639 tc 640
||
Sbjct: 929955 tc 929954
>ref|NM_124149.2| Arabidopsis thaliana kinase AT5G47750 mRNA, complete cds
Length = 2272
Score = 67.9 bits (34), Expect = 3e-009
Identities = 109/134 (81%)
Strand = Plus / Minus
Query: 600 aagagaagctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccc 659
||||||||||| || | |||||| ||||| |||||||| || || ||||| ||||||||
Sbjct: 1652 aagagaagctcgtaaaggaatatcccaaaagtccaccaatccactgcactgccatgccct 1593
Query: 660 tcgccctttataatttcaggtgccaagtactcatgggtgccaacaaaagacatagacctt 719
||||| || || || || || ||||||||||| || ||||| ||||| ||||| || | |
Sbjct: 1592 tcgcctttgatgatctctggggccaagtactcgtgtgtgcccacaaatgacatggaacgt 1533
Query: 720 gcatctgtcggctc 733
||||| || |||||
Sbjct: 1532 gcatcggttggctc 1519
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 67.9 bits (34), Expect = 3e-009
Identities = 109/134 (81%)
Strand = Plus / Plus
Query: 600 aagagaagctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccc 659
||||||||||| || | |||||| ||||| |||||||| || || ||||| ||||||||
Sbjct: 19357549 aagagaagctcgtaaaggaatatcccaaaagtccaccaatccactgcactgccatgccct 19357608
Query: 660 tcgccctttataatttcaggtgccaagtactcatgggtgccaacaaaagacatagacctt 719
||||| || || || || || ||||||||||| || ||||| ||||| ||||| || | |
Sbjct: 19357609 tcgcctttgatgatctctggggccaagtactcgtgtgtgcccacaaatgacatggaacgt 19357668
Query: 720 gcatctgtcggctc 733
||||| || |||||
Sbjct: 19357669 gcatcggttggctc 19357682
Score = 61.9 bits (31), Expect = 2e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
|||||||| || ||||||||||| || || || ||||| ||||| ||||||||||||||
Sbjct: 22657423 gcccaattcactccttcaaagaaaggatgttgctttatctctgttgctccacgcttataa 22657482
Query: 447 gctaatc 453
|||||||
Sbjct: 22657483 gctaatc 22657489
Score = 56.0 bits (28), Expect = 1e-005
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 624 ccaaatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgcc 683
||||| |||||||| || || ||||||||||| || || || || || || || || ||
Sbjct: 22657660 ccaaaggtccaccaatcaactgcacttccatgtccttcacctttgatgatctctggagct 22657719
Query: 684 aagtactcatgggtgccaacaaaagacataga 715
|||||||| || ||||||||||||||||||||
Sbjct: 22657720 aagtactcgtgtgtgccaacaaaagacataga 22657751
Score = 44.1 bits (22), Expect = 0.043
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 579 cctttgaatggtgtcttgccgaagagaagctcatacaagaatatgccaaatgtccaccag 638
||||||||||| || || ||| | ||||||||||| | || || |||||||||||||||
Sbjct: 930458 cctttgaatggagttttcccgtaaagaagctcatatagaaagatcccaaatgtccaccag 930399
Query: 639 tc 640
||
Sbjct: 930398 tc 930397
>gb|B29006.1|B29006 T23M18TR TAMU Arabidopsis thaliana genomic clone T23M18, DNA
sequence
Length = 556
Score = 65.9 bits (33), Expect = 1e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 360 tcaggtggagtggcacacctgattaatgcccaattaacaccttcaaagaacgggtgctgt 419
|||||||||||| |||||| || ||||||||||| |||||||||||||| || |||||
Sbjct: 170 tcaggtggagtgctacaccttatcaatgcccaattcacaccttcaaagaatggatgctgc 229
Query: 420 tttat 424
|||||
Sbjct: 230 tttat 234
>gb|B29138.1|B29138 T27C20TF TAMU Arabidopsis thaliana genomic clone T27C20, DNA
sequence
Length = 352
Score = 65.9 bits (33), Expect = 1e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 360 tcaggtggagtggcacacctgattaatgcccaattaacaccttcaaagaacgggtgctgt 419
|||||||||||| |||||| || ||||||||||| |||||||||||||| || |||||
Sbjct: 170 tcaggtggagtgctacaccttatcaatgcccaattcacaccttcaaagaatggatgctgc 229
Query: 420 tttat 424
|||||
Sbjct: 230 tttat 234
>gb|B78430.1|B78430 T27C20TF.1 TAMU Arabidopsis thaliana genomic clone T27C20, DNA
sequence
Length = 496
Score = 65.9 bits (33), Expect = 1e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 360 tcaggtggagtggcacacctgattaatgcccaattaacaccttcaaagaacgggtgctgt 419
|||||||||||| |||||| || ||||||||||| |||||||||||||| || |||||
Sbjct: 163 tcaggtggagtgctacaccttatcaatgcccaattcacaccttcaaagaatggatgctgc 222
Query: 420 tttat 424
|||||
Sbjct: 223 tttat 227
>gb|AA042649.1|AA042649 24945 CD4-13 Arabidopsis thaliana cDNA clone E7G10T7, mRNA sequence
Length = 487
Score = 65.9 bits (33), Expect = 1e-008
Identities = 102/125 (81%)
Strand = Plus / Plus
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
||||||||||| || ||||||||||| || || || || || || || || |||||||||
Sbjct: 196 aatgcccaattcactccttcaaagaaaggatgttgcttcatctcagttgcaccacgctta 255
Query: 444 tacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagca 503
|||||||||| ||||||||| || || | |||| | |||||| | |||||| ||||||
Sbjct: 256 tacgctaatctatgctgaggctctttcacaagcagactcctaatcaaatccctagcagca 315
Query: 504 aaact 508
|||||
Sbjct: 316 aaact 320
>gb|CB260202.1|CB260202 86-E9535-013-002-K21-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770K212Q 5-PRIME, mRNA sequence
Length = 680
Score = 65.9 bits (33), Expect = 1e-008
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 360 tcaggtggagtggcacacctgattaatgcccaattaacaccttcaaagaacgggtgctgt 419
|||||||||||| |||||| || ||||||||||| |||||||||||||| || |||||
Sbjct: 561 tcaggtggagtgctacaccttatcaatgcccaattcacaccttcaaagaatggatgctgc 502
Query: 420 tttat 424
|||||
Sbjct: 501 tttat 497
>gb|AY062501.1| Arabidopsis thaliana protein kinase 5 (MCA23.7) mRNA, complete cds
Length = 2251
Score = 65.9 bits (33), Expect = 1e-008
Identities = 93/113 (82%)
Strand = Plus / Minus
Query: 600 aagagaagctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccc 659
||||||||||| || | |||||| ||||| |||||||| || || ||||| ||||||||
Sbjct: 1631 aagagaagctcgtaaaggaatatcccaaaagtccaccaatccactgcactgccatgccct 1572
Query: 660 tcgccctttataatttcaggtgccaagtactcatgggtgccaacaaaagacat 712
||||| || || || || || ||||||||||| || ||||| ||||| |||||
Sbjct: 1571 tcgcctttgatgatctctggggccaagtactcgtgtgtgcccacaaatgacat 1519
>gb|AY078927.1| Arabidopsis thaliana At2g44830/T13E15.16 mRNA, complete cds
Length = 2369
Score = 65.9 bits (33), Expect = 1e-008
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 360 tcaggtggagtggcacacctgattaatgcccaattaacaccttcaaagaacgggtgctgt 419
|||||||||||| |||||| || ||||||||||| |||||||||||||| || |||||
Sbjct: 2169 tcaggtggagtgctacaccttatcaatgcccaattcacaccttcaaagaatggatgctgc 2110
Query: 420 tttat 424
|||||
Sbjct: 2109 tttat 2105
>gb|AY093303.1| Arabidopsis thaliana protein kinase 5 (MCA23.7) mRNA, complete cds
Length = 1855
Score = 65.9 bits (33), Expect = 1e-008
Identities = 93/113 (82%)
Strand = Plus / Minus
Query: 600 aagagaagctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccc 659
||||||||||| || | |||||| ||||| |||||||| || || ||||| ||||||||
Sbjct: 1385 aagagaagctcgtaaaggaatatcccaaaagtccaccaatccactgcactgccatgccct 1326
Query: 660 tcgccctttataatttcaggtgccaagtactcatgggtgccaacaaaagacat 712
||||| || || || || || ||||||||||| || ||||| ||||| |||||
Sbjct: 1325 tcgcctttgatgatctctggggccaagtactcgtgtgtgcccacaaatgacat 1273
>gb|AC002388.3| Arabidopsis thaliana chromosome 2 clone T13E15 map m336, complete
sequence
Length = 85534
Score = 65.9 bits (33), Expect = 1e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 360 tcaggtggagtggcacacctgattaatgcccaattaacaccttcaaagaacgggtgctgt 419
|||||||||||| |||||| || ||||||||||| |||||||||||||| || |||||
Sbjct: 60844 tcaggtggagtgctacaccttatcaatgcccaattcacaccttcaaagaatggatgctgc 60903
Query: 420 tttat 424
|||||
Sbjct: 60904 tttat 60908
>ref|NM_180095.1| Arabidopsis thaliana kinase AT2G44830 mRNA, complete cds
Length = 2369
Score = 65.9 bits (33), Expect = 1e-008
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 360 tcaggtggagtggcacacctgattaatgcccaattaacaccttcaaagaacgggtgctgt 419
|||||||||||| |||||| || ||||||||||| |||||||||||||| || |||||
Sbjct: 2169 tcaggtggagtgctacaccttatcaatgcccaattcacaccttcaaagaatggatgctgc 2110
Query: 420 tttat 424
|||||
Sbjct: 2109 tttat 2105
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 65.9 bits (33), Expect = 1e-008
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 360 tcaggtggagtggcacacctgattaatgcccaattaacaccttcaaagaacgggtgctgt 419
|||||||||||| |||||| || ||||||||||| |||||||||||||| || |||||
Sbjct: 18499691 tcaggtggagtgctacaccttatcaatgcccaattcacaccttcaaagaatggatgctgc 18499632
Query: 420 tttat 424
|||||
Sbjct: 18499631 tttat 18499627
Score = 46.1 bits (23), Expect = 0.011
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 376 acctgattaatgcccaattaacaccttcaaa 406
||||||||| |||||| ||||||||||||||
Sbjct: 11377874 acctgattagtgcccagttaacaccttcaaa 11377844
>gb|AV565592.1|AV565592 AV565592 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ227b10F 3', mRNA sequence
Length = 488
Score = 61.9 bits (31), Expect = 2e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
|||||||| || ||||||||||| || || || ||||| ||||| ||||||||||||||
Sbjct: 352 gcccaattcactccttcaaagaaaggatgttgctttatctctgttgctccacgcttataa 411
Query: 447 gctaatc 453
|||||||
Sbjct: 412 gctaatc 418
>gb|BP598074.1|BP598074 BP598074 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-02-B14 3',
mRNA sequence
Length = 420
Score = 61.9 bits (31), Expect = 2e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
|||||||| || ||||||||||| || || || ||||| ||||| ||||||||||||||
Sbjct: 346 gcccaattcactccttcaaagaaaggatgttgctttatctctgttgctccacgcttataa 405
Query: 447 gctaatc 453
|||||||
Sbjct: 406 gctaatc 412
>gb|BP610162.1|BP610162 BP610162 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-10-D20 3',
mRNA sequence
Length = 443
Score = 61.9 bits (31), Expect = 2e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
|||||||| || ||||||||||| || || || ||||| ||||| ||||||||||||||
Sbjct: 209 gcccaattcactccttcaaagaaaggatgttgctttatctctgttgctccacgcttataa 268
Query: 447 gctaatc 453
|||||||
Sbjct: 269 gctaatc 275
>gb|BP611242.1|BP611242 BP611242 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-85-B05 3',
mRNA sequence
Length = 463
Score = 61.9 bits (31), Expect = 2e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
|||||||| || ||||||||||| || || || ||||| ||||| ||||||||||||||
Sbjct: 311 gcccaattcactccttcaaagaaaggatgttgctttatctctgttgctccacgcttataa 370
Query: 447 gctaatc 453
|||||||
Sbjct: 371 gctaatc 377
>gb|BP612233.1|BP612233 BP612233 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-88-L13 3',
mRNA sequence
Length = 444
Score = 61.9 bits (31), Expect = 2e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
|||||||| || ||||||||||| || || || ||||| ||||| ||||||||||||||
Sbjct: 346 gcccaattcactccttcaaagaaaggatgttgctttatctctgttgctccacgcttataa 405
Query: 447 gctaatc 453
|||||||
Sbjct: 406 gctaatc 412
>gb|BP616826.1|BP616826 BP616826 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-21-I10 3',
mRNA sequence
Length = 452
Score = 61.9 bits (31), Expect = 2e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
|||||||| || ||||||||||| || || || ||||| ||||| ||||||||||||||
Sbjct: 311 gcccaattcactccttcaaagaaaggatgttgctttatctctgttgctccacgcttataa 370
Query: 447 gctaatc 453
|||||||
Sbjct: 371 gctaatc 377
>gb|BP618438.1|BP618438 BP618438 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-28-E19 3',
mRNA sequence
Length = 452
Score = 61.9 bits (31), Expect = 2e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
|||||||| || ||||||||||| || || || ||||| ||||| ||||||||||||||
Sbjct: 209 gcccaattcactccttcaaagaaaggatgttgctttatctctgttgctccacgcttataa 268
Query: 447 gctaatc 453
|||||||
Sbjct: 269 gctaatc 275
>gb|BP624364.1|BP624364 BP624364 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-39-P12 3',
mRNA sequence
Length = 436
Score = 61.9 bits (31), Expect = 2e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
|||||||| || ||||||||||| || || || ||||| ||||| ||||||||||||||
Sbjct: 312 gcccaattcactccttcaaagaaaggatgttgctttatctctgttgctccacgcttataa 371
Query: 447 gctaatc 453
|||||||
Sbjct: 372 gctaatc 378
>gb|BP649445.1|BP649445 BP649445 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-13-K11 3',
mRNA sequence
Length = 350
Score = 61.9 bits (31), Expect = 2e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
|||||||| || ||||||||||| || || || ||||| ||||| ||||||||||||||
Sbjct: 275 gcccaattcactccttcaaagaaaggatgttgctttatctctgttgctccacgcttataa 334
Query: 447 gctaatc 453
|||||||
Sbjct: 335 gctaatc 341
>emb|AX506135.1| Sequence 830 from Patent WO0216655
Length = 1497
Score = 61.9 bits (31), Expect = 2e-007
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
|||||||| || ||||||||||| || || || ||||| ||||| ||||||||||||||
Sbjct: 1355 gcccaattcactccttcaaagaaaggatgttgctttatctctgttgctccacgcttataa 1296
Query: 447 gctaatc 453
|||||||
Sbjct: 1295 gctaatc 1289
Score = 56.0 bits (28), Expect = 1e-005
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 624 ccaaatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgcc 683
||||| |||||||| || || ||||||||||| || || || || || || || || ||
Sbjct: 1118 ccaaaggtccaccaatcaactgcacttccatgtccttcacctttgatgatctctggagct 1059
Query: 684 aagtactcatgggtgccaacaaaagacataga 715
|||||||| || ||||||||||||||||||||
Sbjct: 1058 aagtactcgtgtgtgccaacaaaagacataga 1027
>emb|BX833587.1|CNS0A0GL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL64ZD04 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 666
Score = 61.9 bits (31), Expect = 2e-007
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
|||||||| || ||||||||||| || || || ||||| ||||| ||||||||||||||
Sbjct: 315 gcccaattcactccttcaaagaaaggatgttgctttatctctgttgctccacgcttataa 256
Query: 447 gctaatc 453
|||||||
Sbjct: 255 gctaatc 249
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 479,493
Number of Sequences: 1013581
Number of extensions: 479493
Number of successful extensions: 34524
Number of sequences better than 0.5: 85
Number of HSP's better than 0.5 without gapping: 89
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 31757
Number of HSP's gapped (non-prelim): 2751
length of query: 936
length of database: 908,940,872
effective HSP length: 20
effective length of query: 916
effective length of database: 888,669,252
effective search space: 814021034832
effective search space used: 814021034832
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)