BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716286.2.1
(1104 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF651630.1|CF651630 09-L020359-066-002-A03-SP6P MPIZ-ADI... 214 2e-053
gb|AV537417.1|AV537417 AV537417 Arabidopsis thaliana roots ... 214 2e-053
gb|AY049261.1| Arabidopsis thaliana At1g78870/F9K20_8 mRNA,... 214 2e-053
gb|BT000544.1| Arabidopsis thaliana putative ubiquitin-conj... 214 2e-053
gb|AY085854.1| Arabidopsis thaliana clone 19071 mRNA, compl... 214 2e-053
ref|NM_106535.2| Arabidopsis thaliana ubiquitin conjugating... 214 2e-053
gb|DQ027048.1| Arabidopsis thaliana ubiquitinating enzyme (... 214 2e-053
gb|CB256784.1|CB256784 61-E011172-027-005-I15-T7R MPIZ-ADIS... 206 6e-051
emb|BX814028.1|CNS0AE9U Arabidopsis thaliana Full-length cD... 204 2e-050
ref|NM_179571.2| Arabidopsis thaliana ubiquitin conjugating... 200 4e-049
gb|CB259578.1|CB259578 38-E9538-013-002-L10-T7R MPIZ-ADIS-0... 198 1e-048
emb|BX814646.1|CNS0AC4W Arabidopsis thaliana Full-length cD... 192 9e-047
gb|AV825916.1|AV825916 AV825916 RAFL7 Arabidopsis thaliana ... 186 6e-045
gb|AV824615.1|AV824615 AV824615 RAFL6 Arabidopsis thaliana ... 184 2e-044
gb|CB254245.1|CB254245 75-E015332-019-005-F19-T7R MPIZ-ADIS... 184 2e-044
gb|AY052307.1| Arabidopsis thaliana At1g16890/F17F16.16 mRN... 184 2e-044
gb|AY061926.1| Arabidopsis thaliana At1g16890/F17F16.16 mRN... 184 2e-044
gb|AY086780.1| Arabidopsis thaliana clone 2763 mRNA, comple... 184 2e-044
ref|NM_101550.1| Arabidopsis thaliana ubiquitin conjugating... 184 2e-044
gb|DQ027049.1| Arabidopsis thaliana ubiquitinating enzyme (... 184 2e-044
gb|AV545137.1|AV545137 AV545137 Arabidopsis thaliana roots ... 182 9e-044
ref|NM_179347.1| Arabidopsis thaliana ubiquitin conjugating... 182 9e-044
gb|T43710.1|T43710 6973 Lambda-PRL2 Arabidopsis thaliana cD... 178 1e-042
emb|BX813701.1|CNS0AEIF Arabidopsis thaliana Full-length cD... 167 5e-039
gb|AV794908.1|AV794908 AV794908 RAFL8 Arabidopsis thaliana ... 145 2e-032
gb|AI993889.1|AI993889 701515319 A. thaliana, Ohio State cl... 141 3e-031
ref|NM_001036221.1| Arabidopsis thaliana ubiquitin conjugat... 141 3e-031
gb|AV820658.1|AV820658 AV820658 RAFL11 Arabidopsis thaliana... 139 1e-030
gb|AA712478.1|AA712478 32193 Lambda-PRL2 Arabidopsis thalia... 137 5e-030
gb|BP565033.1|BP565033 BP565033 RAFL14 Arabidopsis thaliana... 137 5e-030
gb|BP862006.1|BP862006 BP862006 RAFL21 Arabidopsis thaliana... 135 2e-029
gb|T22122.1|T22122 4130 Lambda-PRL2 Arabidopsis thaliana cD... 133 7e-029
gb|AV819577.1|AV819577 AV819577 RAFL11 Arabidopsis thaliana... 129 1e-027
gb|AV792906.1|AV792906 AV792906 RAFL7 Arabidopsis thaliana ... 123 7e-026
gb|BP669230.1|BP669230 BP669230 RAFL21 Arabidopsis thaliana... 121 3e-025
gb|BP666336.1|BP666336 BP666336 RAFL21 Arabidopsis thaliana... 119 1e-024
gb|AV790640.1|AV790640 AV790640 RAFL6 Arabidopsis thaliana ... 117 4e-024
gb|BP621472.1|BP621472 BP621472 RAFL16 Arabidopsis thaliana... 117 4e-024
gb|AV809348.1|AV809348 AV809348 RAFL9 Arabidopsis thaliana ... 115 2e-023
gb|BP836421.1|BP836421 BP836421 RAFL19 Arabidopsis thaliana... 115 2e-023
gb|Z34711.1|Z34711 ATTS3471 Strasbourg-A Arabidopsis thalia... 113 7e-023
gb|BP608679.1|BP608679 BP608679 RAFL16 Arabidopsis thaliana... 113 7e-023
gb|BE523894.1|BE523894 M43C2STM Arabidopsis developing seed... 111 3e-022
gb|BP854585.1|BP854585 BP854585 RAFL21 Arabidopsis thaliana... 109 1e-021
gb|T46680.1|T46680 9943 Lambda-PRL2 Arabidopsis thaliana cD... 103 6e-020
gb|AA040983.1|AA040983 24249 CD4-13 Arabidopsis thaliana cD... 101 3e-019
gb|BP640016.1|BP640016 BP640016 RAFL19 Arabidopsis thaliana... 100 1e-018
gb|BE038605.1|BE038605 AB01G07 AB Arabidopsis thaliana cDNA... 98 4e-018
emb|BX813418.1|CNS0ACA7 Arabidopsis thaliana Full-length cD... 98 4e-018
gb|BP837747.1|BP837747 BP837747 RAFL19 Arabidopsis thaliana... 96 2e-017
gb|H37659.1|H37659 15788 Lambda-PRL2 Arabidopsis thaliana c... 94 6e-017
gb|CB264254.1|CB264254 77-E014659-035-002-I20-T7R MPIZ-ADIS... 94 6e-017
gb|BP819994.1|BP819994 BP819994 RAFL19 Arabidopsis thaliana... 94 6e-017
gb|AV553815.1|AV553815 AV553815 Arabidopsis thaliana roots ... 92 2e-016
gb|BP647557.1|BP647557 BP647557 RAFL19 Arabidopsis thaliana... 90 1e-015
gb|BP857352.1|BP857352 BP857352 RAFL21 Arabidopsis thaliana... 90 1e-015
gb|AV786972.1|AV786972 AV786972 RAFL6 Arabidopsis thaliana ... 88 4e-015
gb|T45804.1|T45804 9067 Lambda-PRL2 Arabidopsis thaliana cD... 86 1e-014
gb|BP625389.1|BP625389 BP625389 RAFL17 Arabidopsis thaliana... 86 1e-014
gb|BP851319.1|BP851319 BP851319 RAFL21 Arabidopsis thaliana... 86 1e-014
gb|AA597426.1|AA597426 29697 Lambda-PRL2 Arabidopsis thalia... 84 6e-014
gb|AV537053.1|AV537053 AV537053 Arabidopsis thaliana liquid... 84 6e-014
gb|AV558510.1|AV558510 AV558510 Arabidopsis thaliana green ... 84 6e-014
gb|CD529244.1|CD529244 02D19 Arabidopsis Leaf Senescence Li... 80 9e-013
gb|AA712777.1|AA712777 32336 Lambda-PRL2 Arabidopsis thalia... 78 4e-012
gb|BP822506.1|BP822506 BP822506 RAFL19 Arabidopsis thaliana... 72 2e-010
gb|CW799164.1|CW799164 WiscDsLox323H12 Arabidopsis thaliana... 64 5e-008
gb|CW800248.1|CW800248 WiscDsLox233237_16L Arabidopsis thal... 64 5e-008
gb|BP650293.1|BP650293 BP650293 RAFL19 Arabidopsis thaliana... 64 5e-008
gb|BP861202.1|BP861202 BP861202 RAFL21 Arabidopsis thaliana... 64 5e-008
gb|AC005679.1|F9K20 Arabidopsis thaliana chromosome 1 BAC F... 64 5e-008
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 64 5e-008
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 64 5e-008
gb|BP653425.1|BP653425 BP653425 RAFL19 Arabidopsis thaliana... 62 2e-007
gb|BP829877.1|BP829877 BP829877 RAFL19 Arabidopsis thaliana... 60 9e-007
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 60 9e-007
gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BA... 60 9e-007
gb|AC051629.3|AC051629 Arabidopsis thaliana chromosome I BA... 60 9e-007
gb|H36151.1|H36151 14673 Lambda-PRL2 Arabidopsis thaliana c... 54 5e-005
gb|AV788167.1|AV788167 AV788167 RAFL6 Arabidopsis thaliana ... 54 5e-005
gb|BP569281.1|BP569281 BP569281 RAFL14 Arabidopsis thaliana... 46 0.013
gb|T88233.1|T88233 11929 Lambda-PRL2 Arabidopsis thaliana c... 44 0.051
>gb|CF651630.1|CF651630 09-L020359-066-002-A03-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001A032Q 5-PRIME, mRNA sequence
Length = 789
Score = 214 bits (108), Expect = 2e-053
Identities = 306/372 (82%)
Strand = Plus / Minus
Query: 506 tcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctc 565
|||||| ||||| ||||| || || ||||| ||||| ||||| || ||||||||| ||||
Sbjct: 584 tcatgcgccgcttgcataaagacgggtccattccttagctgtatccacagcttctgcctc 525
Query: 566 attggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcact 625
||| ||||||||||| |||||||| || || || || |||||||| |||||||||||
Sbjct: 524 attactcttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcact 465
Query: 626 cagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtc 685
||| ||||| || ||||| || || |||||||| || || ||||| ||||||||||||||
Sbjct: 464 cagaagagcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtc 405
Query: 686 cttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggt 745
||||||||| || || || || || ||||||||||||||||| ||||| || ||||| ||
Sbjct: 404 cttgagaatatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgt 345
Query: 746 cagaaacctaacctttggggcagccatgggatattcctcaggtaaaaagagttcaagctt 805
|||||||||||||| || || ||||| || ||||| ||||| |||||||| || | |||
Sbjct: 344 gagaaacctaaccttgggagctgccatagggtattcttcaggcaaaaagagctccaactt 285
Query: 806 aaaaactccaccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagcg 865
|||||||| |||||||| || || || | || ||||| |||||||||||||| || ||
Sbjct: 284 gaaaactcctccttcataaggtgattgtgtaggaccaagaatcataacgttgaaataccg 225
Query: 866 catgttctcctc 877
||| || |||||
Sbjct: 224 catattatcctc 213
>gb|AV537417.1|AV537417 AV537417 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ05f06F 3', mRNA sequence
Length = 596
Score = 214 bits (108), Expect = 2e-053
Identities = 306/372 (82%)
Strand = Plus / Plus
Query: 506 tcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctc 565
|||||| ||||| ||||| || || ||||| ||||| ||||| || ||||||||| ||||
Sbjct: 171 tcatgcgccgcttgcataaagacgggtccattccttagctgtatccacagcttctgcctc 230
Query: 566 attggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcact 625
||| ||||||||||| |||||||| || || || || |||||||| |||||||||||
Sbjct: 231 attactcttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcact 290
Query: 626 cagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtc 685
||| ||||| || ||||| || || |||||||| || || ||||| ||||||||||||||
Sbjct: 291 cagaagagcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtc 350
Query: 686 cttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggt 745
||||||||| || || || || || ||||||||||||||||| ||||| || ||||| ||
Sbjct: 351 cttgagaatatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgt 410
Query: 746 cagaaacctaacctttggggcagccatgggatattcctcaggtaaaaagagttcaagctt 805
|||||||||||||| || || ||||| || ||||| ||||| |||||||| || | |||
Sbjct: 411 gagaaacctaaccttgggagctgccatagggtattcttcaggcaaaaagagctccaactt 470
Query: 806 aaaaactccaccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagcg 865
|||||||| |||||||| || || || | || ||||| |||||||||||||| || ||
Sbjct: 471 gaaaactcctccttcataaggtgattgtgtaggaccaagaatcataacgttgaaataccg 530
Query: 866 catgttctcctc 877
||| || |||||
Sbjct: 531 catattatcctc 542
>gb|AY049261.1| Arabidopsis thaliana At1g78870/F9K20_8 mRNA, complete cds
Length = 757
Score = 214 bits (108), Expect = 2e-053
Identities = 306/372 (82%)
Strand = Plus / Minus
Query: 506 tcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctc 565
|||||| ||||| ||||| || || ||||| ||||| ||||| || ||||||||| ||||
Sbjct: 572 tcatgcgccgcttgcataaagacgggtccattccttagctgtatccacagcttctgcctc 513
Query: 566 attggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcact 625
||| ||||||||||| |||||||| || || || || |||||||| |||||||||||
Sbjct: 512 attactcttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcact 453
Query: 626 cagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtc 685
||| ||||| || ||||| || || |||||||| || || ||||| ||||||||||||||
Sbjct: 452 cagaagagcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtc 393
Query: 686 cttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggt 745
||||||||| || || || || || ||||||||||||||||| ||||| || ||||| ||
Sbjct: 392 cttgagaatatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgt 333
Query: 746 cagaaacctaacctttggggcagccatgggatattcctcaggtaaaaagagttcaagctt 805
|||||||||||||| || || ||||| || ||||| ||||| |||||||| || | |||
Sbjct: 332 gagaaacctaaccttgggagctgccatagggtattcttcaggcaaaaagagctccaactt 273
Query: 806 aaaaactccaccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagcg 865
|||||||| |||||||| || || || | || ||||| |||||||||||||| || ||
Sbjct: 272 gaaaactcctccttcataaggtgattgtgtaggaccaagaatcataacgttgaaataccg 213
Query: 866 catgttctcctc 877
||| || |||||
Sbjct: 212 catattatcctc 201
>gb|BT000544.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme E2
(At1g78870/F9K20_8) mRNA, complete cds
Length = 462
Score = 214 bits (108), Expect = 2e-053
Identities = 306/372 (82%)
Strand = Plus / Minus
Query: 506 tcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctc 565
|||||| ||||| ||||| || || ||||| ||||| ||||| || ||||||||| ||||
Sbjct: 462 tcatgcgccgcttgcataaagacgggtccattccttagctgtatccacagcttctgcctc 403
Query: 566 attggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcact 625
||| ||||||||||| |||||||| || || || || |||||||| |||||||||||
Sbjct: 402 attactcttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcact 343
Query: 626 cagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtc 685
||| ||||| || ||||| || || |||||||| || || ||||| ||||||||||||||
Sbjct: 342 cagaagagcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtc 283
Query: 686 cttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggt 745
||||||||| || || || || || ||||||||||||||||| ||||| || ||||| ||
Sbjct: 282 cttgagaatatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgt 223
Query: 746 cagaaacctaacctttggggcagccatgggatattcctcaggtaaaaagagttcaagctt 805
|||||||||||||| || || ||||| || ||||| ||||| |||||||| || | |||
Sbjct: 222 gagaaacctaaccttgggagctgccatagggtattcttcaggcaaaaagagctccaactt 163
Query: 806 aaaaactccaccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagcg 865
|||||||| |||||||| || || || | || ||||| |||||||||||||| || ||
Sbjct: 162 gaaaactcctccttcataaggtgattgtgtaggaccaagaatcataacgttgaaataccg 103
Query: 866 catgttctcctc 877
||| || |||||
Sbjct: 102 catattatcctc 91
>gb|AY085854.1| Arabidopsis thaliana clone 19071 mRNA, complete sequence
Length = 778
Score = 214 bits (108), Expect = 2e-053
Identities = 306/372 (82%)
Strand = Plus / Minus
Query: 506 tcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctc 565
|||||| ||||| ||||| || || ||||| ||||| ||||| || ||||||||| ||||
Sbjct: 595 tcatgcgccgcttgcataaagacgggtccattccttagctgtatccacagcttctgcctc 536
Query: 566 attggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcact 625
||| ||||||||||| |||||||| || || || || |||||||| |||||||||||
Sbjct: 535 attactcttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcact 476
Query: 626 cagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtc 685
||| ||||| || ||||| || || |||||||| || || ||||| ||||||||||||||
Sbjct: 475 cagaagagcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtc 416
Query: 686 cttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggt 745
||||||||| || || || || || ||||||||||||||||| ||||| || ||||| ||
Sbjct: 415 cttgagaatatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgt 356
Query: 746 cagaaacctaacctttggggcagccatgggatattcctcaggtaaaaagagttcaagctt 805
|||||||||||||| || || ||||| || ||||| ||||| |||||||| || | |||
Sbjct: 355 gagaaacctaaccttgggagctgccatagggtattcttcaggcaaaaagagctccaactt 296
Query: 806 aaaaactccaccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagcg 865
|||||||| |||||||| || || || | || ||||| |||||||||||||| || ||
Sbjct: 295 gaaaactcctccttcataaggtgattgtgtaggaccaagaatcataacgttgaaataccg 236
Query: 866 catgttctcctc 877
||| || |||||
Sbjct: 235 catattatcctc 224
>ref|NM_106535.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
activating enzyme AT1G78870 transcript variant
AT1G78870.2 mRNA, complete cds
Length = 909
Score = 214 bits (108), Expect = 2e-053
Identities = 306/372 (82%)
Strand = Plus / Minus
Query: 506 tcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctc 565
|||||| ||||| ||||| || || ||||| ||||| ||||| || ||||||||| ||||
Sbjct: 595 tcatgcgccgcttgcataaagacgggtccattccttagctgtatccacagcttctgcctc 536
Query: 566 attggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcact 625
||| ||||||||||| |||||||| || || || || |||||||| |||||||||||
Sbjct: 535 attactcttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcact 476
Query: 626 cagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtc 685
||| ||||| || ||||| || || |||||||| || || ||||| ||||||||||||||
Sbjct: 475 cagaagagcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtc 416
Query: 686 cttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggt 745
||||||||| || || || || || ||||||||||||||||| ||||| || ||||| ||
Sbjct: 415 cttgagaatatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgt 356
Query: 746 cagaaacctaacctttggggcagccatgggatattcctcaggtaaaaagagttcaagctt 805
|||||||||||||| || || ||||| || ||||| ||||| |||||||| || | |||
Sbjct: 355 gagaaacctaaccttgggagctgccatagggtattcttcaggcaaaaagagctccaactt 296
Query: 806 aaaaactccaccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagcg 865
|||||||| |||||||| || || || | || ||||| |||||||||||||| || ||
Sbjct: 295 gaaaactcctccttcataaggtgattgtgtaggaccaagaatcataacgttgaaataccg 236
Query: 866 catgttctcctc 877
||| || |||||
Sbjct: 235 catattatcctc 224
>gb|DQ027048.1| Arabidopsis thaliana ubiquitinating enzyme (At1g78870) mRNA,
complete cds
Length = 462
Score = 214 bits (108), Expect = 2e-053
Identities = 306/372 (82%)
Strand = Plus / Minus
Query: 506 tcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctc 565
|||||| ||||| ||||| || || ||||| ||||| ||||| || ||||||||| ||||
Sbjct: 462 tcatgcgccgcttgcataaagacgggtccattccttagctgtatccacagcttctgcctc 403
Query: 566 attggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcact 625
||| ||||||||||| |||||||| || || || || |||||||| |||||||||||
Sbjct: 402 attactcttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcact 343
Query: 626 cagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtc 685
||| ||||| || ||||| || || |||||||| || || ||||| ||||||||||||||
Sbjct: 342 cagaagagcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtc 283
Query: 686 cttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggt 745
||||||||| || || || || || ||||||||||||||||| ||||| || ||||| ||
Sbjct: 282 cttgagaatatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgt 223
Query: 746 cagaaacctaacctttggggcagccatgggatattcctcaggtaaaaagagttcaagctt 805
|||||||||||||| || || ||||| || ||||| ||||| |||||||| || | |||
Sbjct: 222 gagaaacctaaccttgggagctgccatagggtattcttcaggcaaaaagagctccaactt 163
Query: 806 aaaaactccaccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagcg 865
|||||||| |||||||| || || || | || ||||| |||||||||||||| || ||
Sbjct: 162 gaaaactcctccttcataaggtgattgtgtaggaccaagaatcataacgttgaaataccg 103
Query: 866 catgttctcctc 877
||| || |||||
Sbjct: 102 catattatcctc 91
>gb|CB256784.1|CB256784 61-E011172-027-005-I15-T7R MPIZ-ADIS-027 Arabidopsis thaliana cDNA
clone MPIZp772I155Q 5-PRIME, mRNA sequence
Length = 615
Score = 206 bits (104), Expect = 6e-051
Identities = 305/372 (81%)
Strand = Plus / Minus
Query: 506 tcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctc 565
|||||| ||||| ||||| || || ||||| || || ||||| || ||||||||| ||||
Sbjct: 591 tcatgcgccgcttgcataaagacgggtccattcattagctgtatccacagcttctgcctc 532
Query: 566 attggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcact 625
||| ||||||||||| |||||||| || || || || |||||||| |||||||||||
Sbjct: 531 attactcttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcact 472
Query: 626 cagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtc 685
||| ||||| || ||||| || || |||||||| || || ||||| ||||||||||||||
Sbjct: 471 cagaagagcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtc 412
Query: 686 cttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggt 745
||||||||| || || || || || ||||||||||||||||| ||||| || ||||| ||
Sbjct: 411 cttgagaatatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgt 352
Query: 746 cagaaacctaacctttggggcagccatgggatattcctcaggtaaaaagagttcaagctt 805
|||||||||||||| || || ||||| || ||||| ||||| |||||||| || | |||
Sbjct: 351 gagaaacctaaccttgggagctgccatagggtattcttcaggcaaaaagagctccaactt 292
Query: 806 aaaaactccaccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagcg 865
|||||||| |||||||| || || || | || ||||| |||||||||||||| || ||
Sbjct: 291 gaaaactcctccttcataaggtgattgtgtaggaccaagaatcataacgttgaaataccg 232
Query: 866 catgttctcctc 877
||| || |||||
Sbjct: 231 catattatcctc 220
>emb|BX814028.1|CNS0AE9U Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB52ZH04 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 803
Score = 204 bits (103), Expect = 2e-050
Identities = 286/347 (82%)
Strand = Plus / Minus
Query: 531 gtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgcaatg 590
||||| ||||| ||||| || || |||||| ||||||| ||||||||||| ||||||
Sbjct: 555 gtccattccttagctgtatccaccgcttctgcctcattactcttccagtgcttagcaatg 496
Query: 591 ttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaaaga 650
|| || || || || |||||||| |||||||||||||| ||||| || ||||| || |||
Sbjct: 495 ttctcagaaagcggatcatctgggtttggtgcactcagaagagcttgaatacttaagaga 436
Query: 651 actgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatccta 710
|||||||| || || ||||| ||||||||||||||||||||||| || || || || ||
Sbjct: 435 actgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacagattctt 376
Query: 711 ccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagcc 770
||||||||||||||||| ||||| || ||||| || |||||||||||||| || || |||
Sbjct: 375 ccaagcttgtcaatgttaggatggtatatctttgtgagaaacctaaccttgggcgctgcc 316
Query: 771 atgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgac 830
|| || ||||| ||||| |||||||| || | ||| |||||||| |||||||| || ||
Sbjct: 315 atagggtattcttcaggcaaaaagagctccaacttgaaaactcctccttcataaggtgat 256
Query: 831 tgcgccggcccaaggatcataacgttgaagtagcgcatgttctcctc 877
|| | || ||||| |||||||||||||| || ||||| || |||||
Sbjct: 255 tgtgtaggaccaagaatcataacgttgaaataccgcatattatcctc 209
>ref|NM_179571.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
activating enzyme AT1G78870 transcript variant
AT1G78870.1 mRNA, complete cds
Length = 905
Score = 200 bits (101), Expect = 4e-049
Identities = 307/375 (81%), Gaps = 3/375 (0%)
Strand = Plus / Minus
Query: 506 tcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctc 565
|||||| ||||| ||||| || || ||||| ||||| ||||| || ||||||||| ||||
Sbjct: 591 tcatgcgccgcttgcataaagacgggtccattccttagctgtatccacagcttctgcctc 532
Query: 566 attggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcact 625
||| ||||||||||| |||||||| || || || || |||||||| |||||||||||
Sbjct: 531 attactcttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcact 472
Query: 626 cagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtc 685
||| ||||| || ||||| || || |||||||| || || ||||| ||||||||||||||
Sbjct: 471 cagaagagcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtc 412
Query: 686 cttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggt 745
||||||||| || || || || || ||||||||||||||||| ||||| || ||||| ||
Sbjct: 411 cttgagaatatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgt 352
Query: 746 cagaaacctaacctttggggcagccatgggatattcctcaggtaaaaagagttcaagctt 805
|||||||||||||| || || ||||| || ||||| ||||| |||||||| || | |||
Sbjct: 351 gagaaacctaaccttgggagctgccatagggtattcttcaggcaaaaagagctccaactt 292
Query: 806 aaaaactcc---accttcatagggcgactgcgccggcccaaggatcataacgttgaagta 862
|||||||| ||||||||| || || || | || ||||| |||||||||||||| ||
Sbjct: 291 gaaaactcctctaccttcataaggtgattgtgtaggaccaagaatcataacgttgaaata 232
Query: 863 gcgcatgttctcctc 877
||||| || |||||
Sbjct: 231 ccgcatattatcctc 217
>gb|CB259578.1|CB259578 38-E9538-013-002-L10-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770L102Q 5-PRIME, mRNA sequence
Length = 603
Score = 198 bits (100), Expect = 1e-048
Identities = 304/372 (81%)
Strand = Plus / Minus
Query: 506 tcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctc 565
|||||| ||||| ||||| || || ||||| ||||| ||||| || ||||||||| ||||
Sbjct: 602 tcatgcgccgcttgcataaagacgggtccattccttagctgtatccacagcttctgcctc 543
Query: 566 attggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcact 625
||| | ||||||||| |||||||| || || || || |||||||| |||||||||||
Sbjct: 542 attactctcccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcact 483
Query: 626 cagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtc 685
||| ||||| || ||||| || || |||||||| || || ||||| ||||||||||||||
Sbjct: 482 cagaagagcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtc 423
Query: 686 cttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggt 745
||||||||| || || || || || ||||||||||||||||| ||||| || ||||| ||
Sbjct: 422 cttgagaatatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgt 363
Query: 746 cagaaacctaacctttggggcagccatgggatattcctcaggtaaaaagagttcaagctt 805
|||||||||||||| || || ||||| || ||||| ||||| |||||||| || | |||
Sbjct: 362 gagaaacctaaccttgggagctgccatagggtattcttcaggcaaaaagagctccaactt 303
Query: 806 aaaaactccaccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagcg 865
|||||||| |||||||| || || || | || ||||| |||||| ||||||| || ||
Sbjct: 302 gaaaactcctccttcataaggtgattgtgtaggaccaagaatcatagcgttgaaataccg 243
Query: 866 catgttctcctc 877
||| || |||||
Sbjct: 242 catattatcctc 231
>emb|BX814646.1|CNS0AC4W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB86ZH05 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 515
Score = 192 bits (97), Expect = 9e-047
Identities = 256/309 (82%)
Strand = Plus / Minus
Query: 506 tcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctc 565
|||||| ||||| ||||| || || ||||| ||||| ||||| || ||||||||| ||||
Sbjct: 313 tcatgcgccgcttgcataaagacgggtccattccttagctgtatccacagcttctgcctc 254
Query: 566 attggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcact 625
||| ||||||||||| |||||||| || || || || |||||||| |||||||||||
Sbjct: 253 attactcttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcact 194
Query: 626 cagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtc 685
||| ||||| || ||||| || || |||||||| || || ||||| ||||||||||||||
Sbjct: 193 cagaagagcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtc 134
Query: 686 cttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggt 745
||||||||| || || || || || ||||||||||||||||| ||||| || ||||| ||
Sbjct: 133 cttgagaatatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttgt 74
Query: 746 cagaaacctaacctttggggcagccatgggatattcctcaggtaaaaagagttcaagctt 805
|||||||||||||| || || ||||| || ||||| ||||| |||||||| || | |||
Sbjct: 73 gagaaacctaaccttgggagctgccatagggtattcttcaggcaaaaagagctccaactt 14
Query: 806 aaaaactcc 814
||||||||
Sbjct: 13 gaaaactcc 5
>gb|AV825916.1|AV825916 AV825916 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-17-D23 5',
mRNA sequence
Length = 607
Score = 186 bits (94), Expect = 6e-045
Identities = 305/373 (81%), Gaps = 2/373 (0%)
Strand = Plus / Minus
Query: 506 tcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctc 565
|||||| ||||| ||||| || || ||||| ||||| ||||| || ||||||| | ||||
Sbjct: 573 tcatgcgccgct-gcataaagccgggtccattccttagctgtatccacagcttntgcctc 515
Query: 566 attggatttccagtgctttgc-aatgttatcggagagagggtcatctggatttggtgcac 624
||| ||||||||||| || |||||| || || || || |||||||| ||||||||||
Sbjct: 514 attactcttccagtgcttagccaatgttctcagaaagcggatcatctgggtttggtgcac 455
Query: 625 tcagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgt 684
|||| ||||| || ||||| || || |||||||| || || ||||| |||||||||||||
Sbjct: 454 tcagaagagcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgt 395
Query: 685 ccttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttgg 744
|||||||||| || || || || || ||||||||||||||||| ||||| || ||||| |
Sbjct: 394 ccttgagaatatcaagacagattcttccaagcttgtcaatgttaggatggtatatctttg 335
Query: 745 tcagaaacctaacctttggggcagccatgggatattcctcaggtaaaaagagttcaagct 804
| |||||||||||||| || || ||||| || ||||| ||||| |||||||| || | ||
Sbjct: 334 tgagaaacctaaccttgggagctgccatagggtattcttcaggcaaaaagagctccaact 275
Query: 805 taaaaactccaccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagc 864
| |||||||| |||||||| || || || | || ||||| |||||||||||||| || |
Sbjct: 274 tgaaaactcctccttcataaggtgattgtgtaggaccaagaatcataacgttgaaatacc 215
Query: 865 gcatgttctcctc 877
|||| || |||||
Sbjct: 214 gcatattatcctc 202
>gb|AV824615.1|AV824615 AV824615 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-73-J10 5',
mRNA sequence
Length = 659
Score = 184 bits (93), Expect = 2e-044
Identities = 333/413 (80%)
Strand = Plus / Minus
Query: 528 cgagtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgca 587
|||||||| ||||| |||||||| ||||||||| |||||||| ||||| ||||| ||
Sbjct: 539 cgagtccattccttagctgtttccacagcttctgcctcattgctcttccaatgcttagct 480
Query: 588 atgttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaa 647
||||| || || ||||| |||||||| ||||||||||| | ||||| || ||||||||
Sbjct: 479 atgttctcagacagaggatcatctgggtttggtgcacttaaaagagcttggatactcaag 420
Query: 648 agaactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatc 707
|| || ||||| || || ||||| || ||||| ||||| || || ||||| ||||| ||
Sbjct: 419 agcacagttcgtatttgtagtgcaggactccacttgtctttcagtatgtcaaggcagatt 360
Query: 708 ctaccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggca 767
|| ||||||||||| ||||| ||||| ||||||||||| |||||||||||||| || ||
Sbjct: 359 cttccaagcttgtcgatgttaggatggtaaatcttggtgagaaacctaaccttgggagct 300
Query: 768 gccatgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggc 827
||||| |||||||| ||||| |||||||| || | ||| |||||||| |||||||| ||
Sbjct: 299 gccataggatattcttcaggcaaaaagagctccaacttgaaaactcctccttcataagga 240
Query: 828 gactgcgccggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgac 887
|| || | || ||||| |||||||| ||||| || | ||| || ||||| || || |||
Sbjct: 239 gattgagtaggaccaagaatcataacattgaaatatctcatattttcctctgatggagac 180
Query: 888 gcgctgatccccggcgctggctcgctgagcagtcgctgcgtctccttgatgat 940
|| || ||||| || || || || || ||||| || || || |||||||||||
Sbjct: 179 gcacttatcccaggagcaggttcactaagcagacgttgagtttccttgatgat 127
>gb|CB254245.1|CB254245 75-E015332-019-005-F19-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768F195Q 5-PRIME, mRNA sequence
Length = 709
Score = 184 bits (93), Expect = 2e-044
Identities = 333/413 (80%)
Strand = Plus / Minus
Query: 528 cgagtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgca 587
|||||||| ||||| |||||||| ||||||||| |||||||| ||||| ||||| ||
Sbjct: 523 cgagtccattccttagctgtttccacagcttctgcctcattgctcttccaatgcttagct 464
Query: 588 atgttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaa 647
||||| || || ||||| |||||||| ||||||||||| | ||||| || ||||||||
Sbjct: 463 atgttctcagacagaggatcatctgggtttggtgcacttaaaagagcttggatactcaag 404
Query: 648 agaactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatc 707
|| || ||||| || || ||||| || ||||| ||||| || || ||||| ||||| ||
Sbjct: 403 agcacagttcgtatttgtagtgcaggactccacttgtctttcagtatgtcaaggcagatt 344
Query: 708 ctaccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggca 767
|| ||||||||||| ||||| ||||| ||||||||||| |||||||||||||| || ||
Sbjct: 343 cttccaagcttgtcgatgttaggatggtaaatcttggtgagaaacctaaccttgggagct 284
Query: 768 gccatgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggc 827
||||| |||||||| ||||| |||||||| || | ||| |||||||| |||||||| ||
Sbjct: 283 gccataggatattcttcaggcaaaaagagctccaacttgaaaactcctccttcataagga 224
Query: 828 gactgcgccggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgac 887
|| || | || ||||| |||||||| ||||| || | ||| || ||||| || || |||
Sbjct: 223 gattgagtaggaccaagaatcataacattgaaatatctcatattttcctctgatggagac 164
Query: 888 gcgctgatccccggcgctggctcgctgagcagtcgctgcgtctccttgatgat 940
|| || ||||| || || || || || ||||| || || || |||||||||||
Sbjct: 163 gcacttatcccaggagcaggttcactaagcagacgttgagtttccttgatgat 111
>gb|AY052307.1| Arabidopsis thaliana At1g16890/F17F16.16 mRNA, complete cds
Length = 751
Score = 184 bits (93), Expect = 2e-044
Identities = 333/413 (80%)
Strand = Plus / Minus
Query: 528 cgagtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgca 587
|||||||| ||||| |||||||| ||||||||| |||||||| ||||| ||||| ||
Sbjct: 538 cgagtccattccttagctgtttccacagcttctgcctcattgctcttccaatgcttagct 479
Query: 588 atgttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaa 647
||||| || || ||||| |||||||| ||||||||||| | ||||| || ||||||||
Sbjct: 478 atgttctcagacagaggatcatctgggtttggtgcacttaaaagagcttggatactcaag 419
Query: 648 agaactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatc 707
|| || ||||| || || ||||| || ||||| ||||| || || ||||| ||||| ||
Sbjct: 418 agcacagttcgtatttgtagtgcaggactccacttgtctttcagtatgtcaaggcagatt 359
Query: 708 ctaccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggca 767
|| ||||||||||| ||||| ||||| ||||||||||| |||||||||||||| || ||
Sbjct: 358 cttccaagcttgtcgatgttaggatggtaaatcttggtgagaaacctaaccttgggagct 299
Query: 768 gccatgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggc 827
||||| |||||||| ||||| |||||||| || | ||| |||||||| |||||||| ||
Sbjct: 298 gccataggatattcttcaggcaaaaagagctccaacttgaaaactcctccttcataagga 239
Query: 828 gactgcgccggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgac 887
|| || | || ||||| |||||||| ||||| || | ||| || ||||| || || |||
Sbjct: 238 gattgagtaggaccaagaatcataacattgaaatatctcatattttcctctgatggagac 179
Query: 888 gcgctgatccccggcgctggctcgctgagcagtcgctgcgtctccttgatgat 940
|| || ||||| || || || || || ||||| || || || |||||||||||
Sbjct: 178 gcacttatcccaggagcaggttcactaagcagacgttgagtttccttgatgat 126
>gb|AY061926.1| Arabidopsis thaliana At1g16890/F17F16.16 mRNA, complete cds
Length = 462
Score = 184 bits (93), Expect = 2e-044
Identities = 333/413 (80%)
Strand = Plus / Minus
Query: 528 cgagtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgca 587
|||||||| ||||| |||||||| ||||||||| |||||||| ||||| ||||| ||
Sbjct: 440 cgagtccattccttagctgtttccacagcttctgcctcattgctcttccaatgcttagct 381
Query: 588 atgttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaa 647
||||| || || ||||| |||||||| ||||||||||| | ||||| || ||||||||
Sbjct: 380 atgttctcagacagaggatcatctgggtttggtgcacttaaaagagcttggatactcaag 321
Query: 648 agaactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatc 707
|| || ||||| || || ||||| || ||||| ||||| || || ||||| ||||| ||
Sbjct: 320 agcacagttcgtatttgtagtgcaggactccacttgtctttcagtatgtcaaggcagatt 261
Query: 708 ctaccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggca 767
|| ||||||||||| ||||| ||||| ||||||||||| |||||||||||||| || ||
Sbjct: 260 cttccaagcttgtcgatgttaggatggtaaatcttggtgagaaacctaaccttgggagct 201
Query: 768 gccatgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggc 827
||||| |||||||| ||||| |||||||| || | ||| |||||||| |||||||| ||
Sbjct: 200 gccataggatattcttcaggcaaaaagagctccaacttgaaaactcctccttcataagga 141
Query: 828 gactgcgccggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgac 887
|| || | || ||||| |||||||| ||||| || | ||| || ||||| || || |||
Sbjct: 140 gattgagtaggaccaagaatcataacattgaaatatctcatattttcctctgatggagac 81
Query: 888 gcgctgatccccggcgctggctcgctgagcagtcgctgcgtctccttgatgat 940
|| || ||||| || || || || || ||||| || || || |||||||||||
Sbjct: 80 gcacttatcccaggagcaggttcactaagcagacgttgagtttccttgatgat 28
>gb|AY086780.1| Arabidopsis thaliana clone 2763 mRNA, complete sequence
Length = 795
Score = 184 bits (93), Expect = 2e-044
Identities = 333/413 (80%)
Strand = Plus / Minus
Query: 528 cgagtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgca 587
|||||||| ||||| |||||||| ||||||||| |||||||| ||||| ||||| ||
Sbjct: 569 cgagtccattccttagctgtttccacagcttctgcctcattgctcttccaatgcttagct 510
Query: 588 atgttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaa 647
||||| || || ||||| |||||||| ||||||||||| | ||||| || ||||||||
Sbjct: 509 atgttctcagacagaggatcatctgggtttggtgcacttaaaagagcttggatactcaag 450
Query: 648 agaactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatc 707
|| || ||||| || || ||||| || ||||| ||||| || || ||||| ||||| ||
Sbjct: 449 agcacagttcgtatttgtagtgcaggactccacttgtctttcagtatgtcaaggcagatt 390
Query: 708 ctaccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggca 767
|| ||||||||||| ||||| ||||| ||||||||||| |||||||||||||| || ||
Sbjct: 389 cttccaagcttgtcgatgttaggatggtaaatcttggtgagaaacctaaccttgggagct 330
Query: 768 gccatgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggc 827
||||| |||||||| ||||| |||||||| || | ||| |||||||| |||||||| ||
Sbjct: 329 gccataggatattcttcaggcaaaaagagctccaacttgaaaactcctccttcataagga 270
Query: 828 gactgcgccggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgac 887
|| || | || ||||| |||||||| ||||| || | ||| || ||||| || || |||
Sbjct: 269 gattgagtaggaccaagaatcataacattgaaatatctcatattttcctctgatggagac 210
Query: 888 gcgctgatccccggcgctggctcgctgagcagtcgctgcgtctccttgatgat 940
|| || ||||| || || || || || ||||| || || || |||||||||||
Sbjct: 209 gcacttatcccaggagcaggttcactaagcagacgttgagtttccttgatgat 157
>ref|NM_101550.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
activating enzyme AT1G16890 transcript variant
AT1G16890.2 mRNA, complete cds
Length = 794
Score = 184 bits (93), Expect = 2e-044
Identities = 333/413 (80%)
Strand = Plus / Minus
Query: 528 cgagtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgca 587
|||||||| ||||| |||||||| ||||||||| |||||||| ||||| ||||| ||
Sbjct: 568 cgagtccattccttagctgtttccacagcttctgcctcattgctcttccaatgcttagct 509
Query: 588 atgttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaa 647
||||| || || ||||| |||||||| ||||||||||| | ||||| || ||||||||
Sbjct: 508 atgttctcagacagaggatcatctgggtttggtgcacttaaaagagcttggatactcaag 449
Query: 648 agaactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatc 707
|| || ||||| || || ||||| || ||||| ||||| || || ||||| ||||| ||
Sbjct: 448 agcacagttcgtatttgtagtgcaggactccacttgtctttcagtatgtcaaggcagatt 389
Query: 708 ctaccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggca 767
|| ||||||||||| ||||| ||||| ||||||||||| |||||||||||||| || ||
Sbjct: 388 cttccaagcttgtcgatgttaggatggtaaatcttggtgagaaacctaaccttgggagct 329
Query: 768 gccatgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggc 827
||||| |||||||| ||||| |||||||| || | ||| |||||||| |||||||| ||
Sbjct: 328 gccataggatattcttcaggcaaaaagagctccaacttgaaaactcctccttcataagga 269
Query: 828 gactgcgccggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgac 887
|| || | || ||||| |||||||| ||||| || | ||| || ||||| || || |||
Sbjct: 268 gattgagtaggaccaagaatcataacattgaaatatctcatattttcctctgatggagac 209
Query: 888 gcgctgatccccggcgctggctcgctgagcagtcgctgcgtctccttgatgat 940
|| || ||||| || || || || || ||||| || || || |||||||||||
Sbjct: 208 gcacttatcccaggagcaggttcactaagcagacgttgagtttccttgatgat 156
>gb|DQ027049.1| Arabidopsis thaliana ubiquitinating enzyme (At1g16890) mRNA,
complete cds
Length = 462
Score = 184 bits (93), Expect = 2e-044
Identities = 333/413 (80%)
Strand = Plus / Minus
Query: 528 cgagtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgca 587
|||||||| ||||| |||||||| ||||||||| |||||||| ||||| ||||| ||
Sbjct: 440 cgagtccattccttagctgtttccacagcttctgcctcattgctcttccaatgcttagct 381
Query: 588 atgttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaa 647
||||| || || ||||| |||||||| ||||||||||| | ||||| || ||||||||
Sbjct: 380 atgttctcagacagaggatcatctgggtttggtgcacttaaaagagcttggatactcaag 321
Query: 648 agaactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatc 707
|| || ||||| || || ||||| || ||||| ||||| || || ||||| ||||| ||
Sbjct: 320 agcacagttcgtatttgtagtgcaggactccacttgtctttcagtatgtcaaggcagatt 261
Query: 708 ctaccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggca 767
|| ||||||||||| ||||| ||||| ||||||||||| |||||||||||||| || ||
Sbjct: 260 cttccaagcttgtcgatgttaggatggtaaatcttggtgagaaacctaaccttgggagct 201
Query: 768 gccatgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggc 827
||||| |||||||| ||||| |||||||| || | ||| |||||||| |||||||| ||
Sbjct: 200 gccataggatattcttcaggcaaaaagagctccaacttgaaaactcctccttcataagga 141
Query: 828 gactgcgccggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgac 887
|| || | || ||||| |||||||| ||||| || | ||| || ||||| || || |||
Sbjct: 140 gattgagtaggaccaagaatcataacattgaaatatctcatattttcctctgatggagac 81
Query: 888 gcgctgatccccggcgctggctcgctgagcagtcgctgcgtctccttgatgat 940
|| || ||||| || || || || || ||||| || || || |||||||||||
Sbjct: 80 gcacttatcccaggagcaggttcactaagcagacgttgagtttccttgatgat 28
>gb|AV545137.1|AV545137 AV545137 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ73a08F 3', mRNA sequence
Length = 651
Score = 182 bits (92), Expect = 9e-044
Identities = 245/296 (82%)
Strand = Plus / Plus
Query: 528 cgagtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgca 587
|||||||| ||||| |||||||| ||||||||| |||||||| ||||| ||||| ||
Sbjct: 187 cgagtccattccttagctgtttccacagcttctgcctcattgctcttccaatgcttagct 246
Query: 588 atgttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaa 647
||||| || || ||||| |||||||| ||||||||||| | ||||| || ||||||||
Sbjct: 247 atgttctcagacagaggatcatctgggtttggtgcacttaaaagagcttggatactcaag 306
Query: 648 agaactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatc 707
|| || ||||| || || ||||| || ||||| ||||| || || ||||| ||||| ||
Sbjct: 307 agcacagttcgtatttgtagtgcaggactccacttgtctttcagtatgtcaaggcagatt 366
Query: 708 ctaccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggca 767
|| ||||||||||| ||||| ||||| ||||||||||| |||||||||||||| || ||
Sbjct: 367 cttccaagcttgtcgatgttaggatggtaaatcttggtgagaaacctaaccttgggagct 426
Query: 768 gccatgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcata 823
||||| |||||||| ||||| |||||||| || | ||| |||||||| ||||||||
Sbjct: 427 gccataggatattcttcaggcaaaaagagctccaacttgaaaactcctccttcata 482
>ref|NM_179347.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
activating enzyme AT1G16890 transcript variant
AT1G16890.1 mRNA, complete cds
Length = 804
Score = 182 bits (92), Expect = 9e-044
Identities = 245/296 (82%)
Strand = Plus / Minus
Query: 528 cgagtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgca 587
|||||||| ||||| |||||||| ||||||||| |||||||| ||||| ||||| ||
Sbjct: 578 cgagtccattccttagctgtttccacagcttctgcctcattgctcttccaatgcttagct 519
Query: 588 atgttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaa 647
||||| || || ||||| |||||||| ||||||||||| | ||||| || ||||||||
Sbjct: 518 atgttctcagacagaggatcatctgggtttggtgcacttaaaagagcttggatactcaag 459
Query: 648 agaactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatc 707
|| || ||||| || || ||||| || ||||| ||||| || || ||||| ||||| ||
Sbjct: 458 agcacagttcgtatttgtagtgcaggactccacttgtctttcagtatgtcaaggcagatt 399
Query: 708 ctaccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggca 767
|| ||||||||||| ||||| ||||| ||||||||||| |||||||||||||| || ||
Sbjct: 398 cttccaagcttgtcgatgttaggatggtaaatcttggtgagaaacctaaccttgggagct 339
Query: 768 gccatgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcata 823
||||| |||||||| ||||| |||||||| || | ||| |||||||| ||||||||
Sbjct: 338 gccataggatattcttcaggcaaaaagagctccaacttgaaaactcctccttcata 283
>gb|T43710.1|T43710 6973 Lambda-PRL2 Arabidopsis thaliana cDNA clone 122K3T7, mRNA
sequence
Length = 491
Score = 178 bits (90), Expect = 1e-042
Identities = 244/296 (82%)
Strand = Plus / Minus
Query: 528 cgagtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgca 587
|||||||| ||||| |||||||| ||||||||| |||||||| ||||| ||||| ||
Sbjct: 308 cgagtccattccttagctgtttccacagcttctgcctcattgctcttccaatgcttagct 249
Query: 588 atgttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaa 647
||||| || || ||||| |||||||| ||||||||||| | ||||| || ||||||||
Sbjct: 248 atgttctcagacagaggatcatctgggtttggtgcacttaaaagagcttggatactcaag 189
Query: 648 agaactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatc 707
|| || ||||| || || ||||| || ||||| ||||| || || ||||| ||||| ||
Sbjct: 188 agcacagttcgtatttgtagtgcaggactccacttgtctttcagtatgtcaaggcagatt 129
Query: 708 ctaccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggca 767
|| ||||||||||| ||||| ||||| ||||||||||| |||||||||||||| || ||
Sbjct: 128 cttccaagcttgtcgatgttaggatggtaaatcttggtnagaaacctaaccttgggagct 69
Query: 768 gccatgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcata 823
||||| |||||||| ||||| |||||||| || ||| |||||||| ||||||||
Sbjct: 68 gccataggatattcttcaggcaaaaagagctccnacttgaaaactcctccttcata 13
>emb|BX813701.1|CNS0AEIF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB34ZF06 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 745
Score = 167 bits (84), Expect = 5e-039
Identities = 243/296 (82%)
Strand = Plus / Minus
Query: 528 cgagtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgca 587
|||||||| ||||| |||||||| ||||||||| |||||||| ||||| ||||| ||
Sbjct: 537 cgagtccattccttcgctgtttccacagcttctgcctcattgctcttccaatgcttagct 478
Query: 588 atgttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaa 647
|||| | |||||||| |||||||| ||||||||||| | ||||| || ||||||||
Sbjct: 477 atgtgctgagagagaggatcatctgggtttggtgcacttaaaagagcttggatactcaag 418
Query: 648 agaactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatc 707
| || ||||| || || ||||| || ||||| ||||| || || ||||| ||||| ||
Sbjct: 417 aacacagttcgtatttgtagtgcaggactccacttgtctttcagtatgtcaaggcagatt 358
Query: 708 ctaccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggca 767
|| ||||||||||| ||||| ||||| ||||||||||| |||||||||||||| || ||
Sbjct: 357 cttccaagcttgtcgatgttaggatggtaaatcttggtgagaaacctaaccttgggagct 298
Query: 768 gccatgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcata 823
||||| |||||||| ||||| |||||||| || | ||| |||||||| ||||||||
Sbjct: 297 gccataggatattcttcaggcaaaaagagctccaacttgaaaactcctccttcata 242
>gb|AV794908.1|AV794908 AV794908 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-15-C17 3',
mRNA sequence
Length = 424
Score = 145 bits (73), Expect = 2e-032
Identities = 196/237 (82%)
Strand = Plus / Plus
Query: 506 tcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctc 565
|||||| ||||| ||||| || || ||||| ||||| |||| || ||||||||| ||||
Sbjct: 184 tcatgcgccgcttgcataaagacgggtccattccttacctgtatccacagcttctgcctc 243
Query: 566 attggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcact 625
||| ||||||||||| |||||||| || || || || |||||||| |||||||||||
Sbjct: 244 attactcttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcact 303
Query: 626 cagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtc 685
||| ||||| || ||||| || || |||||||| || || ||||| ||||||||||||||
Sbjct: 304 cagaagagcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtc 363
Query: 686 cttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatctt 742
||||||||| || || || || || ||||||||||||||||| ||||| || |||||
Sbjct: 364 cttgagaatatcaagacagattcttccaagcttgtcaatgttaggatggtatatctt 420
>gb|AI993889.1|AI993889 701515319 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701515319, mRNA sequence
Length = 594
Score = 141 bits (71), Expect = 3e-031
Identities = 188/227 (82%)
Strand = Plus / Minus
Query: 651 actgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatccta 710
|||||||| || || ||||| ||||||||||||||||||||||| || || || || ||
Sbjct: 257 actgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacagattctt 198
Query: 711 ccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagcc 770
||||||||||||||||| ||||| || ||||| || |||||||||||||| || || |||
Sbjct: 197 ccaagcttgtcaatgttaggatggtatatctttgtgagaaacctaaccttgggagctgcc 138
Query: 771 atgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgac 830
|| || ||||| ||||| |||||||| || | ||| |||||||| |||||||| || ||
Sbjct: 137 atagggtattcttcaggcaaaaagagctccaacttgaaaactcctccttcataaggtgat 78
Query: 831 tgcgccggcccaaggatcataacgttgaagtagcgcatgttctcctc 877
|| | || ||||| |||||||||||||| || ||||| || |||||
Sbjct: 77 tgtgtaggaccaagaatcataacgttgaaataccgcatattatcctc 31
Score = 83.8 bits (42), Expect = 6e-014
Identities = 114/138 (82%)
Strand = Plus / Minus
Query: 506 tcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctc 565
|||||| ||||| ||||| || || ||||| ||||| ||||| || ||||||||| ||||
Sbjct: 505 tcatgcgccgcttgcataaagacgggtccattccttagctgtatccacagcttctgcctc 446
Query: 566 attggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcact 625
||| ||||||||||| |||||||| || || || || |||||||| |||||||||||
Sbjct: 445 attactcttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcact 386
Query: 626 cagtagagcctgtatact 643
||| ||||| || |||||
Sbjct: 385 cagaagagcttgaatact 368
>ref|NM_001036221.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
activating enzyme AT1G78870 transcript variant
AT1G78870.3 mRNA, complete cds
Length = 1013
Score = 141 bits (71), Expect = 3e-031
Identities = 188/227 (82%)
Strand = Plus / Minus
Query: 651 actgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatccta 710
|||||||| || || ||||| ||||||||||||||||||||||| || || || || ||
Sbjct: 451 actgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacagattctt 392
Query: 711 ccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagcc 770
||||||||||||||||| ||||| || ||||| || |||||||||||||| || || |||
Sbjct: 391 ccaagcttgtcaatgttaggatggtatatctttgtgagaaacctaaccttgggagctgcc 332
Query: 771 atgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgac 830
|| || ||||| ||||| |||||||| || | ||| |||||||| |||||||| || ||
Sbjct: 331 atagggtattcttcaggcaaaaagagctccaacttgaaaactcctccttcataaggtgat 272
Query: 831 tgcgccggcccaaggatcataacgttgaagtagcgcatgttctcctc 877
|| | || ||||| |||||||||||||| || ||||| || |||||
Sbjct: 271 tgtgtaggaccaagaatcataacgttgaaataccgcatattatcctc 225
Score = 83.8 bits (42), Expect = 6e-014
Identities = 114/138 (82%)
Strand = Plus / Minus
Query: 506 tcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctc 565
|||||| ||||| ||||| || || ||||| ||||| ||||| || ||||||||| ||||
Sbjct: 699 tcatgcgccgcttgcataaagacgggtccattccttagctgtatccacagcttctgcctc 640
Query: 566 attggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcact 625
||| ||||||||||| |||||||| || || || || |||||||| |||||||||||
Sbjct: 639 attactcttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcact 580
Query: 626 cagtagagcctgtatact 643
||| ||||| || |||||
Sbjct: 579 cagaagagcttgaatact 562
>gb|AV820658.1|AV820658 AV820658 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-11-J19 3',
mRNA sequence
Length = 420
Score = 139 bits (70), Expect = 1e-030
Identities = 185/222 (83%), Gaps = 1/222 (0%)
Strand = Plus / Plus
Query: 506 tcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctc 565
|||||| ||||| ||||| || || ||||| ||||| ||||| || ||||||||| ||||
Sbjct: 200 tcatgcgccgcttgcataaagacgggtccattccttagctgtatccacagcttctgcctc 259
Query: 566 attggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcact 625
||| ||||||||||| |||||||| || || || || |||||||| |||||||||||
Sbjct: 260 attactcttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcact 319
Query: 626 cagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtc 685
||| ||||| || ||||| || || |||||||| || || ||||| ||||||||||||||
Sbjct: 320 cagaagagcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtc 379
Query: 686 cttgagaatgtcgaggcatatcctaccaagcttgtcaatgtt 727
||||||||| || || || || || |||||||||||||||||
Sbjct: 380 cttgagaatatcaagacagattct-ccaagcttgtcaatgtt 420
>gb|AA712478.1|AA712478 32193 Lambda-PRL2 Arabidopsis thaliana cDNA clone 194K16T7, mRNA
sequence
Length = 452
Score = 137 bits (69), Expect = 5e-030
Identities = 204/250 (81%)
Strand = Plus / Minus
Query: 528 cgagtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgca 587
|||||||| ||||| |||||||| ||||||||| |||||||| ||||| ||||| ||
Sbjct: 250 cgagtccattccttagctgtttccacagcttctgcctcattgctcttccaatgcttagct 191
Query: 588 atgttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaa 647
||||| || || ||||| |||||||| ||||||||||| | ||||| || ||||| ||
Sbjct: 190 atgttctcagacagaggatcatctgggtttggtgcacttaaaagagcttggatactnaag 131
Query: 648 agaactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatc 707
|| || ||||| || || ||||| || ||||| ||||| || || ||||| ||| | ||
Sbjct: 130 agcacagttcgtatttgtagtgcaggactccacttgtctttcagtatgtcaaggnagatt 71
Query: 708 ctaccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggca 767
|| ||||||||||| ||||| ||||| ||||||||||| |||||||||||||| || ||
Sbjct: 70 cttccaagcttgtcgatgttaggatggtaaatcttggtnagaaacctaaccttgggagct 11
Query: 768 gccatgggat 777
||||| ||||
Sbjct: 10 gccataggat 1
>gb|BP565033.1|BP565033 BP565033 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-10-I23 3',
mRNA sequence
Length = 411
Score = 137 bits (69), Expect = 5e-030
Identities = 165/197 (83%)
Strand = Plus / Plus
Query: 531 gtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgcaatg 590
||||| ||||| ||||| || ||||||||| ||||||| ||||||||||| ||||||
Sbjct: 211 gtccattccttagctgtatccacagcttctgcctcattactcttccagtgcttagcaatg 270
Query: 591 ttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaaaga 650
|| || || || || |||||||| |||||||||||||| ||||| || ||||| || ||
Sbjct: 271 ttctcagaaagcggatcatctgggtttggtgcactcagaagagcttgaatacttaagagc 330
Query: 651 actgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatccta 710
|||||||| || || ||||| ||||||||||||||||||||||| || || || || ||
Sbjct: 331 actgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacagattctt 390
Query: 711 ccaagcttgtcaatgtt 727
|||||||||||||||||
Sbjct: 391 ccaagcttgtcaatgtt 407
>gb|BP862006.1|BP862006 BP862006 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-49-J15 5',
mRNA sequence
Length = 403
Score = 135 bits (68), Expect = 2e-029
Identities = 176/212 (83%)
Strand = Plus / Minus
Query: 666 agtgctgggctccatttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaatg 725
||||| ||||||||||||||||||||||| || || || || || |||||||||||||||
Sbjct: 402 agtgcagggctccatttgtccttgagaatatcaagacagattcttccaagcttgtcaatg 343
Query: 726 ttgggatgataaatcttggtcagaaacctaacctttggggcagccatgggatattcctca 785
|| ||||| || ||||| || |||||||||||||| || || ||||| || ||||| |||
Sbjct: 342 ttaggatggtatatctttgtgagaaacctaaccttgggagctgccatagggtattcttca 283
Query: 786 ggtaaaaagagttcaagcttaaaaactccaccttcatagggcgactgcgccggcccaagg 845
|| |||||||| || | ||| |||||||| |||||||| || || || | || |||||
Sbjct: 282 ggcaaaaagagctccaacttgaaaactcctccttcataaggtgattgtgtaggaccaaga 223
Query: 846 atcataacgttgaagtagcgcatgttctcctc 877
|||||||||||||| || ||||| || |||||
Sbjct: 222 atcataacgttgaaataccgcatattatcctc 191
>gb|T22122.1|T22122 4130 Lambda-PRL2 Arabidopsis thaliana cDNA clone 96P20T7, mRNA
sequence
Length = 524
Score = 133 bits (67), Expect = 7e-029
Identities = 169/203 (83%)
Strand = Plus / Minus
Query: 666 agtgctgggctccatttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaatg 725
||||| ||||||||||||||||||||||| || || || || || |||||||||||||||
Sbjct: 240 agtgcagggctccatttgtccttgagaatatcaagacagattcttccaagcttgtcaatg 181
Query: 726 ttgggatgataaatcttggtcagaaacctaacctttggggcagccatgggatattcctca 785
|| ||||| || ||||| || |||||||||||||| || || ||||| || ||||| |||
Sbjct: 180 ttaggatggtatatctttgtgagaaacctaaccttgggagctgccatagggtattcttca 121
Query: 786 ggtaaaaagagttcaagcttaaaaactccaccttcatagggcgactgcgccggcccaagg 845
|| |||||||| || | ||| |||||||| |||||||| || || || | || |||||
Sbjct: 120 ggcaaaaagagctccaacttgaaaactcctccttcataaggtgattgtgtaggaccaaga 61
Query: 846 atcataacgttgaagtagcgcat 868
|||||||||||||| || |||||
Sbjct: 60 atcataacgttgaaataccgcat 38
>gb|AV819577.1|AV819577 AV819577 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-05-L11 3',
mRNA sequence
Length = 411
Score = 129 bits (65), Expect = 1e-027
Identities = 158/189 (83%)
Strand = Plus / Plus
Query: 506 tcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctc 565
|||||| ||||| ||||| || || ||||| ||||| ||||| || ||||||||| ||||
Sbjct: 200 tcatgcgccgcttgcataaagacgggtccattccttagctgtatccacagcttctgcctc 259
Query: 566 attggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcact 625
||| ||||||||||| |||||||| || || || || |||||||| |||||||||||
Sbjct: 260 attactcttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcact 319
Query: 626 cagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtc 685
||| ||||| || ||||| || || |||||||| || || ||||| ||||||||||||||
Sbjct: 320 cagaagagcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtc 379
Query: 686 cttgagaat 694
|||||||||
Sbjct: 380 cttgagaat 388
>gb|AV792906.1|AV792906 AV792906 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-17-D23 3',
mRNA sequence
Length = 417
Score = 123 bits (62), Expect = 7e-026
Identities = 179/218 (82%)
Strand = Plus / Plus
Query: 506 tcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctc 565
|||||| ||||| ||||| || || ||||| ||||| |||| || ||||||||| ||||
Sbjct: 184 tcatgcgccgcttgcataaagacgggtccattccttacctgtatccacagcttctgcctc 243
Query: 566 attggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcact 625
||| ||||||||||| |||||||| || || || || |||||||| |||||||||||
Sbjct: 244 attactcttccagtgcttagcaatgttctcagaaaggggatcatctgggtttggtgcact 303
Query: 626 cagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtc 685
||| ||||| || ||||| || || |||||||| || || ||||| ||||||||||||||
Sbjct: 304 cagaagagcttgaatacttaagagcactgttcgtatttgtagtgcagggctccatttgtc 363
Query: 686 cttgagaatgtcgaggcatatcctaccaagcttgtcaa 723
|||||||| || || || || || |||||||||||||
Sbjct: 364 tttgagaatatcaagacagattcttccaagcttgtcaa 401
>gb|BP669230.1|BP669230 BP669230 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-30-D01 3',
mRNA sequence
Length = 406
Score = 121 bits (61), Expect = 3e-025
Identities = 164/197 (83%), Gaps = 1/197 (0%)
Strand = Plus / Plus
Query: 531 gtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgcaatg 590
||||| ||||| ||||| || ||||||||| ||||||| ||||||||||| ||||||
Sbjct: 210 gtccattccttagctgtatccacagcttctgcctcattactcttccagtgcttagcaatg 269
Query: 591 ttatcggagagagggtcatctggatttggtgcac-tcagtagagcctgtatactcaaaag 649
|| || || || || |||||||| |||||||||| |||| ||||| || ||||| || ||
Sbjct: 270 ttctcagaaagcggatcatctgggtttggtgcacctcagaagagcttgaatacttaagag 329
Query: 650 aactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatcct 709
|||||||| || || ||||| ||||||||||||||||||||||| || || || || ||
Sbjct: 330 cactgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacagattct 389
Query: 710 accaagcttgtcaatgt 726
||||||||||||||||
Sbjct: 390 tccaagcttgtcaatgt 406
>gb|BP666336.1|BP666336 BP666336 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-19-G10 3',
mRNA sequence
Length = 440
Score = 119 bits (60), Expect = 1e-024
Identities = 190/232 (81%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 528 cgagtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgca 587
|||||||| ||||| |||||||| ||||||||| |||||||| ||||| ||||| ||
Sbjct: 208 cgagtccattccttagctgtttccacagcttctgcctcattgctcttccaatgcttagct 267
Query: 588 atgttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaa 647
||||| || || ||||| |||||||| ||||||||||| | ||||| || ||||||||
Sbjct: 268 atgttctcagacagaggatcatctgggtttggtgcacttaaaagagcttggatactcaag 327
Query: 648 agaactgttcgaatctgaagtgctgggctcca-tttgtccttgagaatgtcgaggcatat 706
|| || ||||| || || ||||| || ||||| ||||| || || ||||| ||||| ||
Sbjct: 328 agcacagttcgtatttgtagtgcaggactccaccttgtctttcagtatgtcaaggcagat 387
Query: 707 cctaccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacc 758
|| ||||||||||| ||||| ||||| |||||||||| ||||||||||||
Sbjct: 388 tcttccaagcttgtcgatgttaggatggtaaatcttggggagaaacctaacc 439
>gb|AV790640.1|AV790640 AV790640 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-89-J20 3',
mRNA sequence
Length = 423
Score = 117 bits (59), Expect = 4e-024
Identities = 137/163 (84%)
Strand = Plus / Plus
Query: 531 gtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgcaatg 590
||||| ||||| ||||| || ||||||||| ||||||| ||||||||||| ||||||
Sbjct: 261 gtccattccttagctgtatccacagcttctgcctcattactcttccagtgcttagcaatg 320
Query: 591 ttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaaaga 650
|| || || || || |||||||| |||||||||||||| ||||| || ||||| || ||
Sbjct: 321 ttctcagaaagcggatcatctgggtttggtgcactcagaagagcttgaatacttaagagc 380
Query: 651 actgttcgaatctgaagtgctgggctccatttgtccttgagaa 693
|||||||| || || ||||| ||||||||||||||||||||||
Sbjct: 381 actgttcgtatttgtagtgcagggctccatttgtccttgagaa 423
>gb|BP621472.1|BP621472 BP621472 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-41-K08 3',
mRNA sequence
Length = 422
Score = 117 bits (59), Expect = 4e-024
Identities = 176/215 (81%)
Strand = Plus / Plus
Query: 528 cgagtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgca 587
|||||||| ||||| |||||||| ||||||||| |||||||| ||||| ||||| ||
Sbjct: 208 cgagtccattccttagctgtttccacagcttctgcctcattgctcttccaatgcttagct 267
Query: 588 atgttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaa 647
||||| || || ||||| |||||||| ||||||||||| | ||||| || ||||||||
Sbjct: 268 atgttctcagacagaggatcatctgggtttggtgcacttaaaagagcttggatactcaag 327
Query: 648 agaactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatc 707
|| || ||||| || || ||||| || ||||| ||||| || || ||||| ||||| ||
Sbjct: 328 agcacagttcgtatttgtagtgcaggactccacttgtctttcagtatgtcaaggcagatt 387
Query: 708 ctaccaagcttgtcaatgttgggatgataaatctt 742
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 388 cttccaagcttgtcgatgttaggatggtaaatctt 422
>gb|AV809348.1|AV809348 AV809348 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-59-C17 3',
mRNA sequence
Length = 435
Score = 115 bits (58), Expect = 2e-023
Identities = 179/218 (82%), Gaps = 1/218 (0%)
Strand = Plus / Plus
Query: 506 tcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacc-t 564
|||||| ||||| ||||| || || ||||| ||||| ||||| || ||||||||| || |
Sbjct: 214 tcatgcgccgcttgcataaagacgggtccattccttagctgtatccacagcttctgccct 273
Query: 565 cattggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcac 624
|||| ||||||||||| |||||||| || || || || |||||||| ||||||||||
Sbjct: 274 cattactcttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcac 333
Query: 625 tcagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgt 684
|||| ||||| || ||||| || || |||||||| || || |||| |||||||||||||
Sbjct: 334 tcagaagagcttgaatacttaagagcactgttcgtatttgtagtggagggctccatttgt 393
Query: 685 ccttgagaatgtcgaggcatatcctaccaagcttgtca 722
|||||||||| || || || || || ||||||||||||
Sbjct: 394 ccttgagaatatcaagacagattcttccaagcttgtca 431
>gb|BP836421.1|BP836421 BP836421 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-16-G06 5',
mRNA sequence
Length = 401
Score = 115 bits (58), Expect = 2e-023
Identities = 133/158 (84%)
Strand = Plus / Minus
Query: 666 agtgctgggctccatttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaatg 725
||||| || ||||| ||||| || || ||||| ||||| || || ||||||||||| |||
Sbjct: 398 agtgcaggactccacttgtctttcagtatgtcaaggcagattcttccaagcttgtcgatg 339
Query: 726 ttgggatgataaatcttggtcagaaacctaacctttggggcagccatgggatattcctca 785
|| ||||| ||||||||||| |||||||||||||| || || ||||| |||||||| |||
Sbjct: 338 ttaggatggtaaatcttggtgagaaacctaaccttgggagctgccataggatattcttca 279
Query: 786 ggtaaaaagagttcaagcttaaaaactccaccttcata 823
|| |||||||| || | ||| |||||||| ||||||||
Sbjct: 278 ggcaaaaagagctccaacttgaaaactcctccttcata 241
>gb|Z34711.1|Z34711 ATTS3471 Strasbourg-A Arabidopsis thaliana cDNA clone FAFJ92 3',
mRNA sequence
Length = 364
Score = 113 bits (57), Expect = 7e-023
Identities = 165/201 (82%)
Strand = Plus / Minus
Query: 677 ccatttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgata 736
||||||| |||||||||| || || || || || ||||||||||||||||| ||||| ||
Sbjct: 364 ccatttgcccttgagaatatcaagacagattcttccaagcttgtcaatgttaggatggta 305
Query: 737 aatcttggtcagaaacctaacctttggggcagccatgggatattcctcaggtaaaaagag 796
||||| || |||||||||||||| || || ||||| || ||||| ||||| ||||||||
Sbjct: 304 tatctttgtgagaaacctaaccttgggagctgccatagggtattcttcaggcaaaaagag 245
Query: 797 ttcaagcttaaaaactccaccttcatagggcgactgcgccggcccaaggatcataacgtt 856
|| | ||| |||||||| |||||||| || || || | || ||||| |||||||||||
Sbjct: 244 ctccaacttgaaaactcctccttcataaggtgattgtgtaggaccaagaatcataacgtt 185
Query: 857 gaagtagcgcatgttctcctc 877
||| || ||||| || |||||
Sbjct: 184 gaaataccgcatattatcctc 164
>gb|BP608679.1|BP608679 BP608679 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-79-H09 3',
mRNA sequence
Length = 449
Score = 113 bits (57), Expect = 7e-023
Identities = 156/189 (82%)
Strand = Plus / Plus
Query: 506 tcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctc 565
|||||| ||||| ||||| || || ||||| ||||| ||||| || | ||||||| ||||
Sbjct: 235 tcatgcgccgcttgcataaagacgggtccattccttagctgtatccaaagcttctgcctc 294
Query: 566 attggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcact 625
||| ||||||||||| |||||||| || || || || |||||||| |||||||||||
Sbjct: 295 attactcttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcact 354
Query: 626 cagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtc 685
||| ||||| || ||| | || || |||||||| || || ||||| ||||||||||||||
Sbjct: 355 cagaagagcttgaataattaagagcactgttcgtatttgtagtgcagggctccatttgtc 414
Query: 686 cttgagaat 694
|||||||||
Sbjct: 415 cttgagaat 423
>gb|BE523894.1|BE523894 M43C2STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M43C2 5', mRNA sequence
Length = 396
Score = 111 bits (56), Expect = 3e-022
Identities = 200/248 (80%)
Strand = Plus / Minus
Query: 693 atgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtcagaaac 752
||||| ||||| || || ||||||||||| ||||| ||||| ||||||||||| ||||||
Sbjct: 348 atgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgagaaac 289
Query: 753 ctaacctttggggcagccatgggatattcctcaggtaaaaagagttcaagcttaaaaact 812
|||||||| || || ||||| |||||||| ||||| |||||||| || | ||| ||||||
Sbjct: 288 ctaaccttgggagctgccataggatattcttcaggcaaaaagagctccaacttgaaaact 229
Query: 813 ccaccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagcgcatgttc 872
|| |||||||| || || || | || ||||| |||||||| ||||| || | ||| ||
Sbjct: 228 cctccttcataaggagattgagtaggaccaagaatcataacattgaaatatctcatattt 169
Query: 873 tcctccgagggcgacgcgctgatccccggcgctggctcgctgagcagtcgctgcgtctcc 932
||||| || || ||||| || ||||| || || || || || ||||| || || || |||
Sbjct: 168 tcctctgatggagacgcacttatcccaggagcaggttcactaagcagacgttgagtttcc 109
Query: 933 ttgatgat 940
||||||||
Sbjct: 108 ttgatgat 101
>gb|BP854585.1|BP854585 BP854585 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-23-M09 5',
mRNA sequence
Length = 373
Score = 109 bits (55), Expect = 1e-021
Identities = 112/131 (85%)
Strand = Plus / Minus
Query: 693 atgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtcagaaac 752
||||| ||||| || || ||||||||||| ||||| ||||| ||||||||||| ||||||
Sbjct: 371 atgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgagaaac 312
Query: 753 ctaacctttggggcagccatgggatattcctcaggtaaaaagagttcaagcttaaaaact 812
|||||||| || || ||||| |||||||| ||||| |||||||| || | ||| ||||||
Sbjct: 311 ctaaccttgggagctgccataggatattcttcaggcaaaaagagctccaacttgaaaact 252
Query: 813 ccaccttcata 823
|| ||||||||
Sbjct: 251 cctccttcata 241
>gb|T46680.1|T46680 9943 Lambda-PRL2 Arabidopsis thaliana cDNA clone 139O4T7, mRNA
sequence
Length = 453
Score = 103 bits (52), Expect = 6e-020
Identities = 102/119 (85%)
Strand = Plus / Minus
Query: 705 atcctaccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggg 764
||||| ||||||||| | ||||| ||||| ||||||||||| |||||||||||||| ||
Sbjct: 324 atccttccaagcttgccgatgttaggatggtaaatcttggttagaaacctaaccttggga 265
Query: 765 gcagccatgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcata 823
|| ||||| |||||||| ||||| |||||||| || | ||| |||||||| ||||||||
Sbjct: 264 gctgccataggatattcntcaggcaaaaagagctccaacttgaaaactcctccttcata 206
>gb|AA040983.1|AA040983 24249 CD4-13 Arabidopsis thaliana cDNA clone E10E9T7, mRNA sequence
Length = 606
Score = 101 bits (51), Expect = 3e-019
Identities = 138/167 (82%)
Strand = Plus / Minus
Query: 711 ccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagcc 770
||||||||||||||||| ||||| || ||||| || |||||||||||||| || || |||
Sbjct: 302 ccaagcttgtcaatgttaggatggtatatctttgtgagaaacctaaccttgggagctgcc 243
Query: 771 atgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgac 830
|| || ||||| ||||| |||||||| || | ||| |||||||| |||||||| || ||
Sbjct: 242 atagggtattcttcaggcaaaaagagctccaacttgaaaactcctccttcataaggtgat 183
Query: 831 tgcgccggcccaaggatcataacgttgaagtagcgcatgttctcctc 877
|| | || ||||| |||||||||||||| || ||||| || |||||
Sbjct: 182 tgtgtaggaccaagaatcataacgttgaaataccgcatattatcctc 136
>gb|BP640016.1|BP640016 BP640016 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-50-A09 3',
mRNA sequence
Length = 400
Score = 99.6 bits (50), Expect = 1e-018
Identities = 158/194 (81%)
Strand = Plus / Plus
Query: 528 cgagtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgca 587
|||||||| ||||| |||||||| ||||||||| |||||||| ||||| ||||| ||
Sbjct: 207 cgagtccattccttagctgtttccacagcttctgcctcattgctcttccaatgcttagct 266
Query: 588 atgttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaa 647
||||| || || ||||| |||||||| ||||||||||| | ||||| || ||||||||
Sbjct: 267 atgttctcagacagaggatcatctgggtttggtgcacttaaaagagcttggatactcaag 326
Query: 648 agaactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatc 707
|| || ||||| || || ||||| || ||||| ||||| || || ||||| ||||| ||
Sbjct: 327 agcacagttcgtatttgtagtgcaggactccacttgtctttcagtatgtcaaggcagatt 386
Query: 708 ctaccaagcttgtc 721
|| |||||||||||
Sbjct: 387 cttccaagcttgtc 400
>gb|BE038605.1|BE038605 AB01G07 AB Arabidopsis thaliana cDNA 5' similar to
ubiquitin-conjugating enzyme, mRNA sequence
Length = 432
Score = 97.6 bits (49), Expect = 4e-018
Identities = 142/173 (82%)
Strand = Plus / Minus
Query: 506 tcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctc 565
|||||| ||||| ||||| || || ||||| ||||| ||||| || ||||||||| ||||
Sbjct: 179 tcatgcgccgcttgcataaagacgggtccattccttagctgtatccacagcttctgcctc 120
Query: 566 attggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcact 625
||| ||||||||||| |||||||| || || || || |||||||| |||||||||||
Sbjct: 119 attactcttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcact 60
Query: 626 cagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctcc 678
||| ||||| || ||||| || || |||||||| || || ||||| |||||||
Sbjct: 59 cagaagagcttgaatacttaagagcactgttcgtatttgtagtgcagggctcc 7
>emb|BX813418.1|CNS0ACA7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB16ZE06 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1385
Score = 97.6 bits (49), Expect = 4e-018
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 651 actgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatccta 710
|||||||| || || ||||| ||||||||||||||||||||||| || || || || ||
Sbjct: 983 actgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacagattctt 924
Query: 711 ccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacct 759
||||||||||||||||| ||||| || ||||| || |||||||||||||
Sbjct: 923 ccaagcttgtcaatgttaggatggtatatctttgtgagaaacctaacct 875
Score = 83.8 bits (42), Expect = 6e-014
Identities = 114/138 (82%)
Strand = Plus / Minus
Query: 506 tcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctc 565
|||||| ||||| ||||| || || ||||| ||||| ||||| || ||||||||| ||||
Sbjct: 1231 tcatgcgccgcttgcataaagacgggtccattccttagctgtatccacagcttctgcctc 1172
Query: 566 attggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcact 625
||| ||||||||||| |||||||| || || || || |||||||| |||||||||||
Sbjct: 1171 attactcttccagtgcttagcaatgttctcagaaagcggatcatctgggtttggtgcact 1112
Query: 626 cagtagagcctgtatact 643
||| ||||| || |||||
Sbjct: 1111 cagaagagcttgaatact 1094
>gb|BP837747.1|BP837747 BP837747 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-21-L19 5',
mRNA sequence
Length = 378
Score = 95.6 bits (48), Expect = 2e-017
Identities = 112/132 (84%), Gaps = 1/132 (0%)
Strand = Plus / Minus
Query: 693 atgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtcagaaac 752
||||| ||||| || || ||||||||||| ||||| ||||| ||||||||||| ||||||
Sbjct: 372 atgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgagaaac 313
Query: 753 ctaacctttggg-gcagccatgggatattcctcaggtaaaaagagttcaagcttaaaaac 811
|||||| ||||| || ||||| |||||||| ||||| |||||||| || | ||| ||||
Sbjct: 312 ctaacccttgggagctgccataggatattcttcaggcaaaaagagctccaacttggaaac 253
Query: 812 tccaccttcata 823
||| ||||||||
Sbjct: 252 tcctccttcata 241
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 482,792
Number of Sequences: 1013581
Number of extensions: 482792
Number of successful extensions: 33321
Number of sequences better than 0.5: 82
Number of HSP's better than 0.5 without gapping: 80
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 32448
Number of HSP's gapped (non-prelim): 840
length of query: 1104
length of database: 908,940,872
effective HSP length: 20
effective length of query: 1084
effective length of database: 888,669,252
effective search space: 963317469168
effective search space used: 963317469168
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)