BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.628
(1238 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|T88392.1|T88392 12088 Lambda-PRL2 Arabidopsis thaliana c... 159 1e-036
gb|AV821865.1|AV821865 AV821865 RAFL4 Arabidopsis thaliana ... 159 1e-036
gb|AV442231.1|AV442231 AV442231 Arabidopsis thaliana above-... 159 1e-036
gb|AV518747.1|AV518747 AV518747 Arabidopsis thaliana aboveg... 159 1e-036
gb|AV530726.1|AV530726 AV530726 Arabidopsis thaliana flower... 159 1e-036
gb|AV549801.1|AV549801 AV549801 Arabidopsis thaliana roots ... 159 1e-036
gb|AV550681.1|AV550681 AV550681 Arabidopsis thaliana roots ... 159 1e-036
gb|BP796141.1|BP796141 BP796141 RAFL4 Arabidopsis thaliana ... 159 1e-036
gb|U66343.1|ATU66343 Arabidopsis thaliana calreticulin (Crt... 159 1e-036
gb|AY062628.1| Arabidopsis thaliana calreticulin (Crt1) (At... 159 1e-036
emb|AX507390.1| Sequence 2085 from Patent WO0216655 159 1e-036
gb|AF083783.1| Arabidopsis thaliana clone sps818 unknown mRNA 159 1e-036
gb|BT008511.1| Arabidopsis thaliana At1g56340 gene, complet... 159 1e-036
ref|NM_104513.2| Arabidopsis thaliana CRT1 (CALRETICULIN 1)... 159 1e-036
ref|NM_001036122.1| Arabidopsis thaliana CRT1 (CALRETICULIN... 159 1e-036
gb|AF083699.1| Arabidopsis thaliana clone sps206 unknown mRNA 147 5e-033
gb|AV826036.1|AV826036 AV826036 RAFL8 Arabidopsis thaliana ... 137 5e-030
gb|BU636246.1|BU636246 048F02 Infected Arabidopsis Leaf Ara... 137 5e-030
gb|AV538338.1|AV538338 AV538338 Arabidopsis thaliana roots ... 137 5e-030
gb|U27698.1|ATU27698 Arabidopsis thaliana calreticulin (AtC... 137 5e-030
gb|AY045656.1| Arabidopsis thaliana At1g09210/T12M4_8 mRNA,... 137 5e-030
gb|AY059662.1| Arabidopsis thaliana At1g09210/T12M4_8 mRNA,... 137 5e-030
emb|AX412271.1| Sequence 35 from Patent WO0222675 137 5e-030
emb|AX505492.1| Sequence 187 from Patent WO0216655 137 5e-030
gb|AY086745.1| Arabidopsis thaliana clone 27210 mRNA, compl... 137 5e-030
ref|NM_100791.2| Arabidopsis thaliana calcium ion binding A... 137 5e-030
gb|T45719.1|T45719 8982 Lambda-PRL2 Arabidopsis thaliana cD... 131 3e-028
gb|AV831988.1|AV831988 AV831988 RAFL9 Arabidopsis thaliana ... 119 1e-024
gb|AC069159.8|AC069159 Arabidopsis thaliana chromosome 1 BA... 119 1e-024
gb|AC058785.8|AC058785 Arabidopsis thaliana chromosome 1 BA... 119 1e-024
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 119 1e-024
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 119 1e-024
gb|AV551838.1|AV551838 AV551838 Arabidopsis thaliana roots ... 117 5e-024
emb|BX290352.1| Arabidopsis thaliana T-DNA flanking sequenc... 115 2e-023
gb|U66344.1|ATU66344 Arabidopsis thaliana calreticulin (Crt... 113 7e-023
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 113 7e-023
gb|AC003114.1|T12M4 Arabidopsis thaliana chromosome 1 BAC T... 113 7e-023
emb|BX290351.1| Arabidopsis thaliana T-DNA flanking sequenc... 111 3e-022
gb|AV526677.1|AV526677 AV526677 Arabidopsis thaliana aboveg... 111 3e-022
gb|AV550014.1|AV550014 AV550014 Arabidopsis thaliana roots ... 111 3e-022
gb|BP799343.1|BP799343 BP799343 RAFL14 Arabidopsis thaliana... 107 5e-021
gb|CB263709.1|CB263709 11-E8878-008-014-E03-pBl2 MPIZ-ADIS-... 103 7e-020
gb|CB252683.1|CB252683 19-E018362-019-007-F05-T7R MPIZ-ADIS... 103 7e-020
gb|BP853525.1|BP853525 BP853525 RAFL21 Arabidopsis thaliana... 101 3e-019
gb|BP854754.1|BP854754 BP854754 RAFL21 Arabidopsis thaliana... 100 1e-018
gb|BP856079.1|BP856079 BP856079 RAFL21 Arabidopsis thaliana... 100 1e-018
gb|BP800468.1|BP800468 BP800468 RAFL14 Arabidopsis thaliana... 98 4e-018
gb|BP818037.1|BP818037 BP818037 RAFL19 Arabidopsis thaliana... 98 4e-018
gb|BP836178.1|BP836178 BP836178 RAFL19 Arabidopsis thaliana... 98 4e-018
gb|BP852953.1|BP852953 BP852953 RAFL21 Arabidopsis thaliana... 98 4e-018
gb|BP860089.1|BP860089 BP860089 RAFL21 Arabidopsis thaliana... 98 4e-018
gb|BP815655.1|BP815655 BP815655 RAFL19 Arabidopsis thaliana... 96 2e-017
gb|BP817256.1|BP817256 BP817256 RAFL19 Arabidopsis thaliana... 94 7e-017
gb|BP859534.1|BP859534 BP859534 RAFL21 Arabidopsis thaliana... 94 7e-017
gb|BP815044.1|BP815044 BP815044 RAFL19 Arabidopsis thaliana... 92 3e-016
gb|BP815134.1|BP815134 BP815134 RAFL19 Arabidopsis thaliana... 90 1e-015
gb|BP841190.1|BP841190 BP841190 RAFL19 Arabidopsis thaliana... 90 1e-015
gb|BP860442.1|BP860442 BP860442 RAFL21 Arabidopsis thaliana... 90 1e-015
gb|BP865017.1|BP865017 BP865017 RAFL21 Arabidopsis thaliana... 90 1e-015
gb|BP816017.1|BP816017 BP816017 RAFL19 Arabidopsis thaliana... 88 4e-015
gb|BP818281.1|BP818281 BP818281 RAFL19 Arabidopsis thaliana... 88 4e-015
gb|BP855788.1|BP855788 BP855788 RAFL21 Arabidopsis thaliana... 88 4e-015
gb|BP820980.1|BP820980 BP820980 RAFL19 Arabidopsis thaliana... 86 2e-014
gb|BP855643.1|BP855643 BP855643 RAFL21 Arabidopsis thaliana... 86 2e-014
gb|BP821331.1|BP821331 BP821331 RAFL19 Arabidopsis thaliana... 84 7e-014
gb|BP831497.1|BP831497 BP831497 RAFL19 Arabidopsis thaliana... 84 7e-014
gb|BP839888.1|BP839888 BP839888 RAFL19 Arabidopsis thaliana... 84 7e-014
gb|BP820421.1|BP820421 BP820421 RAFL19 Arabidopsis thaliana... 82 3e-013
gb|BP828547.1|BP828547 BP828547 RAFL19 Arabidopsis thaliana... 82 3e-013
gb|BP853320.1|BP853320 BP853320 RAFL21 Arabidopsis thaliana... 82 3e-013
gb|BP803936.1|BP803936 BP803936 RAFL14 Arabidopsis thaliana... 80 1e-012
gb|BP838344.1|BP838344 BP838344 RAFL19 Arabidopsis thaliana... 78 4e-012
gb|BP797730.1|BP797730 BP797730 RAFL14 Arabidopsis thaliana... 76 2e-011
gb|BP829887.1|BP829887 BP829887 RAFL19 Arabidopsis thaliana... 76 2e-011
gb|BP839830.1|BP839830 BP839830 RAFL19 Arabidopsis thaliana... 76 2e-011
gb|BP852539.1|BP852539 BP852539 RAFL21 Arabidopsis thaliana... 76 2e-011
gb|BP824413.1|BP824413 BP824413 RAFL19 Arabidopsis thaliana... 74 6e-011
gb|BP833080.1|BP833080 BP833080 RAFL19 Arabidopsis thaliana... 74 6e-011
gb|BP833763.1|BP833763 BP833763 RAFL19 Arabidopsis thaliana... 74 6e-011
gb|BP859097.1|BP859097 BP859097 RAFL21 Arabidopsis thaliana... 74 6e-011
gb|CF774382.1|CF774382 AG_FSL_33C09 Arabidopsis ag-1 35S:AG... 72 3e-010
gb|BP812389.1|BP812389 BP812389 RAFL19 Arabidopsis thaliana... 70 1e-009
gb|BP830345.1|BP830345 BP830345 RAFL19 Arabidopsis thaliana... 70 1e-009
gb|BP845052.1|BP845052 BP845052 RAFL21 Arabidopsis thaliana... 70 1e-009
gb|BP797553.1|BP797553 BP797553 RAFL14 Arabidopsis thaliana... 68 4e-009
gb|BP804256.1|BP804256 BP804256 RAFL16 Arabidopsis thaliana... 66 2e-008
gb|BP826382.1|BP826382 BP826382 RAFL19 Arabidopsis thaliana... 64 6e-008
gb|BP832013.1|BP832013 BP832013 RAFL19 Arabidopsis thaliana... 64 6e-008
gb|BP802669.1|BP802669 BP802669 RAFL14 Arabidopsis thaliana... 62 2e-007
gb|BP825051.1|BP825051 BP825051 RAFL19 Arabidopsis thaliana... 60 1e-006
gb|BP865271.1|BP865271 BP865271 RAFL21 Arabidopsis thaliana... 60 1e-006
gb|BP834053.1|BP834053 BP834053 RAFL19 Arabidopsis thaliana... 58 4e-006
gb|BP848576.1|BP848576 BP848576 RAFL21 Arabidopsis thaliana... 58 4e-006
gb|BP832366.1|BP832366 BP832366 RAFL19 Arabidopsis thaliana... 54 6e-005
gb|BP840037.1|BP840037 BP840037 RAFL19 Arabidopsis thaliana... 54 6e-005
gb|AV526234.1|AV526234 AV526234 Arabidopsis thaliana aboveg... 50 0.001
gb|BP811097.1|BP811097 BP811097 RAFL16 Arabidopsis thaliana... 50 0.001
gb|BP822729.1|BP822729 BP822729 RAFL19 Arabidopsis thaliana... 50 0.001
gb|BZ769887.1|BZ769887 SALK_142821.43.70.x Arabidopsis thal... 48 0.004
gb|BP860551.1|BP860551 BP860551 RAFL21 Arabidopsis thaliana... 48 0.004
gb|BP843715.1|BP843715 BP843715 RAFL21 Arabidopsis thaliana... 46 0.014
>gb|T88392.1|T88392 12088 Lambda-PRL2 Arabidopsis thaliana cDNA clone 155M12T7, mRNA
sequence
Length = 538
Score = 159 bits (80), Expect = 1e-036
Identities = 179/212 (84%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| |||||||| ||||||||||||||||||| |||||||| || ||||||
Sbjct: 299 tgtagccacaaatatctggcccaaacataatgctgtaaggagtgtctcctccgaatttcg 240
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||| ||| ||||| || | ||||||||| || ||||||||||||||||
Sbjct: 239 tctggtcaacatcatcacttagcaacttcatgtagccaccaccacagtcaagcttctgct 180
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| |||||||| || | || | |||||||||||||||||| ||||||||| |||
Sbjct: 179 catgcttgacagagaattggaagactaaggtcttatccttgttgctaaactcagggaatt 120
Query: 1021 cggctgaaatggcatagaacctgtaatcctcg 1052
| ||||| || || ||||| ||||| ||||||
Sbjct: 119 cagctgatatagcgtagaatctgtagtcctcg 88
>gb|AV821865.1|AV821865 AV821865 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-17-G02 5', mRNA
sequence
Length = 658
Score = 159 bits (80), Expect = 1e-036
Identities = 179/212 (84%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| |||||||| ||||||||||||||||||| |||||||| || ||||||
Sbjct: 455 tgtagccacaaatatctggcccaaacataatgctgtaaggagtgtctcctccgaatttcg 396
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||| ||| ||||| || | ||||||||| || ||||||||||||||||
Sbjct: 395 tctggtcaacatcatcacttagcaacttcatgtagccaccaccacagtcaagcttctgct 336
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| |||||||| || | || | |||||||||||||||||| ||||||||| |||
Sbjct: 335 catgcttgacagagaattggaagactaaggtcttatccttgttgctaaactcagggaatt 276
Query: 1021 cggctgaaatggcatagaacctgtaatcctcg 1052
| ||||| || || ||||| ||||| ||||||
Sbjct: 275 cagctgatatagcgtagaatctgtagtcctcg 244
>gb|AV442231.1|AV442231 AV442231 Arabidopsis thaliana above-ground organ two to six-week old
Arabidopsis thaliana cDNA clone APZ07b03_r 5', mRNA
sequence
Length = 561
Score = 159 bits (80), Expect = 1e-036
Identities = 179/212 (84%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| |||||||| ||||||||||||||||||| |||||||| || ||||||
Sbjct: 346 tgtagccacaaatatctggcccaaacataatgctgtaaggagtgtctcctccgaatttcg 287
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||| ||| ||||| || | ||||||||| || ||||||||||||||||
Sbjct: 286 tctggtcaacatcatcacttagcaacttcatgtagccaccaccacagtcaagcttctgct 227
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| |||||||| || | || | |||||||||||||||||| ||||||||| |||
Sbjct: 226 catgcttgacagagaattggaagactaaggtcttatccttgttgctaaactcagggaatt 167
Query: 1021 cggctgaaatggcatagaacctgtaatcctcg 1052
| ||||| || || ||||| ||||| ||||||
Sbjct: 166 cagctgatatagcgtagaatctgtagtcctcg 135
>gb|AV518747.1|AV518747 AV518747 Arabidopsis thaliana aboveground organs two to six-week old
Arabidopsis thaliana cDNA clone APD38h01F 3', mRNA
sequence
Length = 642
Score = 159 bits (80), Expect = 1e-036
Identities = 179/212 (84%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| |||||||| ||||||||||||||||||| |||||||| || ||||||
Sbjct: 442 tgtagccacaaatatctggcccaaacataatgctgtaaggagtgtctcctccgaatttcg 383
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||| ||| ||||| || | ||||||||| || ||||||||||||||||
Sbjct: 382 tctggtcaacatcatcacttagcaacttcatgtagccaccaccacagtcaagcttctgct 323
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| |||||||| || | || | |||||||||||||||||| ||||||||| |||
Sbjct: 322 catgcttgacagagaattggaagactaaggtcttatccttgttgctaaactcagggaatt 263
Query: 1021 cggctgaaatggcatagaacctgtaatcctcg 1052
| ||||| || || ||||| ||||| ||||||
Sbjct: 262 cagctgatatagcgtagaatctgtagtcctcg 231
>gb|AV530726.1|AV530726 AV530726 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB007h06F 3', mRNA sequence
Length = 629
Score = 159 bits (80), Expect = 1e-036
Identities = 179/212 (84%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| |||||||| ||||||||||||||||||| |||||||| || ||||||
Sbjct: 429 tgtagccacaaatatctggcccaaacataatgctgtaaggagtgtctcctccgaatttcg 370
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||| ||| ||||| || | ||||||||| || ||||||||||||||||
Sbjct: 369 tctggtcaacatcatcacttagcaacttcatgtagccaccaccacagtcaagcttctgct 310
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| |||||||| || | || | |||||||||||||||||| ||||||||| |||
Sbjct: 309 catgcttgacagagaattggaagactaaggtcttatccttgttgctaaactcagggaatt 250
Query: 1021 cggctgaaatggcatagaacctgtaatcctcg 1052
| ||||| || || ||||| ||||| ||||||
Sbjct: 249 cagctgatatagcgtagaatctgtagtcctcg 218
>gb|AV549801.1|AV549801 AV549801 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ103e02R 5', mRNA sequence
Length = 568
Score = 159 bits (80), Expect = 1e-036
Identities = 179/212 (84%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| |||||||| ||||||||||||||||||| |||||||| || ||||||
Sbjct: 431 tgtagccacaaatatctggcccaaacataatgctgtaaggagtgtctcctccgaatttcg 372
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||| ||| ||||| || | ||||||||| || ||||||||||||||||
Sbjct: 371 tctggtcaacatcatcacttagcaacttcatgtagccaccaccacagtcaagcttctgct 312
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| |||||||| || | || | |||||||||||||||||| ||||||||| |||
Sbjct: 311 catgcttgacagagaattggaagactaaggtcttatccttgttgctaaactcagggaatt 252
Query: 1021 cggctgaaatggcatagaacctgtaatcctcg 1052
| ||||| || || ||||| ||||| ||||||
Sbjct: 251 cagctgatatagcgtagaatctgtagtcctcg 220
>gb|AV550681.1|AV550681 AV550681 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ115h04R 5', mRNA sequence
Length = 565
Score = 159 bits (80), Expect = 1e-036
Identities = 179/212 (84%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| |||||||| ||||||||||||||||||| |||||||| || ||||||
Sbjct: 423 tgtagccacaaatatctggcccaaacataatgctgtaaggagtgtctcctccgaatttcg 364
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||| ||| ||||| || | ||||||||| || ||||||||||||||||
Sbjct: 363 tctggtcaacatcatcacttagcaacttcatgtagccaccaccacagtcaagcttctgct 304
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| |||||||| || | || | |||||||||||||||||| ||||||||| |||
Sbjct: 303 catgcttgacagagaattggaagactaaggtcttatccttgttgctaaactcagggaatt 244
Query: 1021 cggctgaaatggcatagaacctgtaatcctcg 1052
| ||||| || || ||||| ||||| ||||||
Sbjct: 243 cagctgatatagcgtagaatctgtagtcctcg 212
>gb|BP796141.1|BP796141 BP796141 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-10-B16 5', mRNA
sequence
Length = 681
Score = 159 bits (80), Expect = 1e-036
Identities = 179/212 (84%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| |||||||| ||||||||||||||||||| |||||||| || ||||||
Sbjct: 455 tgtagccacaaatatctggcccaaacataatgctgtaaggagtgtctcctccgaatttcg 396
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||| ||| ||||| || | ||||||||| || ||||||||||||||||
Sbjct: 395 tctggtcaacatcatcacttagcaacttcatgtagccaccaccacagtcaagcttctgct 336
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| |||||||| || | || | |||||||||||||||||| ||||||||| |||
Sbjct: 335 catgcttgacagagaattggaagactaaggtcttatccttgttgctaaactcagggaatt 276
Query: 1021 cggctgaaatggcatagaacctgtaatcctcg 1052
| ||||| || || ||||| ||||| ||||||
Sbjct: 275 cagctgatatagcgtagaatctgtagtcctcg 244
>gb|U66343.1|ATU66343 Arabidopsis thaliana calreticulin (Crt1) mRNA, complete cds
Length = 1463
Score = 159 bits (80), Expect = 1e-036
Identities = 179/212 (84%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| |||||||| ||||||||||||||||||| |||||||| || ||||||
Sbjct: 430 tgtagccacaaatatctggcccaaacataatgctgtaaggagtgtctcctccgaatttcg 371
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||| ||| ||||| || | ||||||||| || ||||||||||||||||
Sbjct: 370 tctggtcaacatcatcacttagcaacttcatgtagccaccaccacagtcaagcttctgct 311
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| |||||||| || | || | |||||||||||||||||| ||||||||| |||
Sbjct: 310 catgcttgacagagaattggaagactaaggtcttatccttgttgctaaactcagggaatt 251
Query: 1021 cggctgaaatggcatagaacctgtaatcctcg 1052
| ||||| || || ||||| ||||| ||||||
Sbjct: 250 cagctgatatagcgtagaatctgtagtcctcg 219
>gb|AY062628.1| Arabidopsis thaliana calreticulin (Crt1) (At1g56340; F13N6.20) mRNA,
complete cds
Length = 1440
Score = 159 bits (80), Expect = 1e-036
Identities = 179/212 (84%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| |||||||| ||||||||||||||||||| |||||||| || ||||||
Sbjct: 454 tgtagccacaaatatctggcccaaacataatgctgtaaggagtgtctcctccgaatttcg 395
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||| ||| ||||| || | ||||||||| || ||||||||||||||||
Sbjct: 394 tctggtcaacatcatcacttagcaacttcatgtagccaccaccacagtcaagcttctgct 335
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| |||||||| || | || | |||||||||||||||||| ||||||||| |||
Sbjct: 334 catgcttgacagagaattggaagactaaggtcttatccttgttgctaaactcagggaatt 275
Query: 1021 cggctgaaatggcatagaacctgtaatcctcg 1052
| ||||| || || ||||| ||||| ||||||
Sbjct: 274 cagctgatatagcgtagaatctgtagtcctcg 243
>emb|AX507390.1| Sequence 2085 from Patent WO0216655
Length = 1278
Score = 159 bits (80), Expect = 1e-036
Identities = 179/212 (84%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| |||||||| ||||||||||||||||||| |||||||| || ||||||
Sbjct: 427 tgtagccacaaatatctggcccaaacataatgctgtaaggagtgtctcctccgaatttcg 368
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||| ||| ||||| || | ||||||||| || ||||||||||||||||
Sbjct: 367 tctggtcaacatcatcacttagcaacttcatgtagccaccaccacagtcaagcttctgct 308
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| |||||||| || | || | |||||||||||||||||| ||||||||| |||
Sbjct: 307 catgcttgacagagaattggaagactaaggtcttatccttgttgctaaactcagggaatt 248
Query: 1021 cggctgaaatggcatagaacctgtaatcctcg 1052
| ||||| || || ||||| ||||| ||||||
Sbjct: 247 cagctgatatagcgtagaatctgtagtcctcg 216
>gb|AF083783.1| Arabidopsis thaliana clone sps818 unknown mRNA
Length = 1251
Score = 159 bits (80), Expect = 1e-036
Identities = 179/212 (84%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| |||||||| ||||||||||||||||||| |||||||| || ||||||
Sbjct: 430 tgtagccacaaatatctggcccaaacataatgctgtaaggagtgtctcctccgaatttcg 371
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||| ||| ||||| || | ||||||||| || ||||||||||||||||
Sbjct: 370 tctggtcaacatcatcacttagcaacttcatgtagccaccaccacagtcaagcttctgct 311
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| |||||||| || | || | |||||||||||||||||| ||||||||| |||
Sbjct: 310 catgcttgacagagaattggaagactaaggtcttatccttgttgctaaactcagggaatt 251
Query: 1021 cggctgaaatggcatagaacctgtaatcctcg 1052
| ||||| || || ||||| ||||| ||||||
Sbjct: 250 cagctgatatagcgtagaatctgtagtcctcg 219
>gb|BT008511.1| Arabidopsis thaliana At1g56340 gene, complete cds
Length = 1278
Score = 159 bits (80), Expect = 1e-036
Identities = 179/212 (84%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| |||||||| ||||||||||||||||||| |||||||| || ||||||
Sbjct: 427 tgtagccacaaatatctggcccaaacataatgctgtaaggagtgtctcctccgaatttcg 368
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||| ||| ||||| || | ||||||||| || ||||||||||||||||
Sbjct: 367 tctggtcaacatcatcacttagcaacttcatgtagccaccaccacagtcaagcttctgct 308
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| |||||||| || | || | |||||||||||||||||| ||||||||| |||
Sbjct: 307 catgcttgacagagaattggaagactaaggtcttatccttgttgctaaactcagggaatt 248
Query: 1021 cggctgaaatggcatagaacctgtaatcctcg 1052
| ||||| || || ||||| ||||| ||||||
Sbjct: 247 cagctgatatagcgtagaatctgtagtcctcg 216
>ref|NM_104513.2| Arabidopsis thaliana CRT1 (CALRETICULIN 1); calcium ion binding
AT1G56340 (CRT1) transcript variant AT1G56340.1 mRNA,
complete cds
Length = 1492
Score = 159 bits (80), Expect = 1e-036
Identities = 179/212 (84%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| |||||||| ||||||||||||||||||| |||||||| || ||||||
Sbjct: 454 tgtagccacaaatatctggcccaaacataatgctgtaaggagtgtctcctccgaatttcg 395
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||| ||| ||||| || | ||||||||| || ||||||||||||||||
Sbjct: 394 tctggtcaacatcatcacttagcaacttcatgtagccaccaccacagtcaagcttctgct 335
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| |||||||| || | || | |||||||||||||||||| ||||||||| |||
Sbjct: 334 catgcttgacagagaattggaagactaaggtcttatccttgttgctaaactcagggaatt 275
Query: 1021 cggctgaaatggcatagaacctgtaatcctcg 1052
| ||||| || || ||||| ||||| ||||||
Sbjct: 274 cagctgatatagcgtagaatctgtagtcctcg 243
>ref|NM_001036122.1| Arabidopsis thaliana CRT1 (CALRETICULIN 1); calcium ion binding
AT1G56340 (CRT1) transcript variant AT1G56340.2 mRNA,
complete cds
Length = 1444
Score = 159 bits (80), Expect = 1e-036
Identities = 179/212 (84%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| |||||||| ||||||||||||||||||| |||||||| || ||||||
Sbjct: 454 tgtagccacaaatatctggcccaaacataatgctgtaaggagtgtctcctccgaatttcg 395
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||| ||| ||||| || | ||||||||| || ||||||||||||||||
Sbjct: 394 tctggtcaacatcatcacttagcaacttcatgtagccaccaccacagtcaagcttctgct 335
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| |||||||| || | || | |||||||||||||||||| ||||||||| |||
Sbjct: 334 catgcttgacagagaattggaagactaaggtcttatccttgttgctaaactcagggaatt 275
Query: 1021 cggctgaaatggcatagaacctgtaatcctcg 1052
| ||||| || || ||||| ||||| ||||||
Sbjct: 274 cagctgatatagcgtagaatctgtagtcctcg 243
>gb|AF083699.1| Arabidopsis thaliana clone sps206 unknown mRNA
Length = 438
Score = 147 bits (74), Expect = 5e-033
Identities = 173/206 (83%)
Strand = Plus / Minus
Query: 847 cacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctggt 906
|||| |||||||| ||||||||||||||||||| | |||||| || |||||| ||||||
Sbjct: 438 cacaaatatctggcccaaacataatgctgtaaggagggtctcctccgaatttcgtctggt 379
Query: 907 ctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgct 966
| |||||| ||| ||||| || | ||||||||| || ||||||||||||||||| ||||
Sbjct: 378 caacatcatcacttagcaacttcatgtagccaccaccacagtcaagcttctgctcatgct 319
Query: 967 tcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcggctg 1026
| |||||||| || | || | |||||||||||||||||| ||||||||| |||| ||||
Sbjct: 318 tgacagagaattggaagactaaggtcttatccttgttgctaaactcagggaattcagctg 259
Query: 1027 aaatggcatagaacctgtaatcctcg 1052
| || || ||||| ||||| ||||||
Sbjct: 258 atatagcgtagaatctgtagtcctcg 233
>gb|AV826036.1|AV826036 AV826036 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-08-D06 5', mRNA
sequence
Length = 628
Score = 137 bits (69), Expect = 5e-030
Identities = 171/205 (83%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||||||||| || |||||||| || ||||| | ||||||||||||||||||||
Sbjct: 470 tgtagccacagatatcaggaccaaacatgatactgtatggtgtgtctccaccaaatttct 411
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
| ||||| |||||||||| || | || | ||||||||| |||||||||||||| ||||
Sbjct: 410 tttggtcaacatcaccacttagtagcttcatgtagccaccaccgcagtcaagcttttgct 351
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
||||||| || ||||| || | || | |||||| |||||||| ||||| |||||| | |
Sbjct: 350 cgtgcttgactgagaattggaagactaaggtcttgtccttgttactgaattcagggaact 291
Query: 1021 cggctgaaatggcatagaacctgta 1045
| ||||||||||| ||||| |||||
Sbjct: 290 cagctgaaatggcgtagaatctgta 266
>gb|BU636246.1|BU636246 048F02 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 768
Score = 137 bits (69), Expect = 5e-030
Identities = 171/205 (83%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||||||||| || |||||||| || ||||| | ||||||||||||||||||||
Sbjct: 505 tgtagccacagatatcaggaccaaacatgatactgtatggtgtgtctccaccaaatttct 446
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
| ||||| |||||||||| || | || | ||||||||| |||||||||||||| ||||
Sbjct: 445 tttggtcaacatcaccacttagtagcttcatgtagccaccaccgcagtcaagcttttgct 386
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
||||||| || ||||| || | || | |||||| |||||||| ||||| |||||| | |
Sbjct: 385 cgtgcttgactgagaattggaagactaaggtcttgtccttgttactgaattcagggaact 326
Query: 1021 cggctgaaatggcatagaacctgta 1045
| ||||||||||| ||||| |||||
Sbjct: 325 cagctgaaatggcgtagaatctgta 301
>gb|AV538338.1|AV538338 AV538338 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ114g01F 3', mRNA sequence
Length = 597
Score = 137 bits (69), Expect = 5e-030
Identities = 171/205 (83%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||||||||| || |||||||| || ||||| | ||||||||||||||||||||
Sbjct: 431 tgtagccacagatatcaggaccaaacatgatactgtatggtgtgtctccaccaaatttct 372
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
| ||||| |||||||||| || | || | ||||||||| |||||||||||||| ||||
Sbjct: 371 tttggtcaacatcaccacttagtagcttcatgtagccaccaccgcagtcaagcttttgct 312
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
||||||| || ||||| || | || | |||||| |||||||| ||||| |||||| | |
Sbjct: 311 cgtgcttgactgagaagtggaagactaaggtcttgtccttgttactgaagtcagggaact 252
Query: 1021 cggctgaaatggcatagaacctgta 1045
| ||||||||||| ||||| |||||
Sbjct: 251 cagctgaaatggcgtagaatctgta 227
>gb|U27698.1|ATU27698 Arabidopsis thaliana calreticulin (AtCRTL) mRNA, partial cds
Length = 1413
Score = 137 bits (69), Expect = 5e-030
Identities = 171/205 (83%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||||||||| || |||||||| || ||||| | ||||||||||||||||||||
Sbjct: 382 tgtagccacagatatcaggaccaaacatgatactgtatggtgtgtctccaccaaatttct 323
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
| ||||| |||||||||| || | || | ||||||||| |||||||||||||| ||||
Sbjct: 322 tttggtcaacatcaccacttagtagcttcatgtagccaccaccgcagtcaagcttttgct 263
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
||||||| || ||||| || | || | |||||| |||||||| ||||| |||||| | |
Sbjct: 262 cgtgcttgactgagaattggaagactaaggtcttgtccttgttactgaattcagggaact 203
Query: 1021 cggctgaaatggcatagaacctgta 1045
| ||||||||||| ||||| |||||
Sbjct: 202 cagctgaaatggcgtagaatctgta 178
>gb|AY045656.1| Arabidopsis thaliana At1g09210/T12M4_8 mRNA, complete cds
Length = 1516
Score = 137 bits (69), Expect = 5e-030
Identities = 171/205 (83%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||||||||| || |||||||| || ||||| | ||||||||||||||||||||
Sbjct: 469 tgtagccacagatatcaggaccaaacatgatactgtatggtgtgtctccaccaaatttct 410
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
| ||||| |||||||||| || | || | ||||||||| |||||||||||||| ||||
Sbjct: 409 tttggtcaacatcaccacttagtagcttcatgtagccaccaccgcagtcaagcttttgct 350
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
||||||| || ||||| || | || | |||||| |||||||| ||||| |||||| | |
Sbjct: 349 cgtgcttgactgagaattggaagactaaggtcttgtccttgttactgaattcagggaact 290
Query: 1021 cggctgaaatggcatagaacctgta 1045
| ||||||||||| ||||| |||||
Sbjct: 289 cagctgaaatggcgtagaatctgta 265
>gb|AY059662.1| Arabidopsis thaliana At1g09210/T12M4_8 mRNA, complete cds
Length = 1275
Score = 137 bits (69), Expect = 5e-030
Identities = 171/205 (83%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||||||||| || |||||||| || ||||| | ||||||||||||||||||||
Sbjct: 427 tgtagccacagatatcaggaccaaacatgatactgtatggtgtgtctccaccaaatttct 368
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
| ||||| |||||||||| || | || | ||||||||| |||||||||||||| ||||
Sbjct: 367 tttggtcaacatcaccacttagtagcttcatgtagccaccaccgcagtcaagcttttgct 308
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
||||||| || ||||| || | || | |||||| |||||||| ||||| |||||| | |
Sbjct: 307 cgtgcttgactgagaattggaagactaaggtcttgtccttgttactgaattcagggaact 248
Query: 1021 cggctgaaatggcatagaacctgta 1045
| ||||||||||| ||||| |||||
Sbjct: 247 cagctgaaatggcgtagaatctgta 223
>emb|AX412271.1| Sequence 35 from Patent WO0222675
Length = 1275
Score = 137 bits (69), Expect = 5e-030
Identities = 171/205 (83%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||||||||| || |||||||| || ||||| | ||||||||||||||||||||
Sbjct: 427 tgtagccacagatatcaggaccaaacatgatactgtatggtgtgtctccaccaaatttct 368
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
| ||||| |||||||||| || | || | ||||||||| |||||||||||||| ||||
Sbjct: 367 tttggtcaacatcaccacttagtagcttcatgtagccaccaccgcagtcaagcttttgct 308
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
||||||| || ||||| || | || | |||||| |||||||| ||||| |||||| | |
Sbjct: 307 cgtgcttgactgagaattggaagactaaggtcttgtccttgttactgaattcagggaact 248
Query: 1021 cggctgaaatggcatagaacctgta 1045
| ||||||||||| ||||| |||||
Sbjct: 247 cagctgaaatggcgtagaatctgta 223
>emb|AX505492.1| Sequence 187 from Patent WO0216655
Length = 1275
Score = 137 bits (69), Expect = 5e-030
Identities = 171/205 (83%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||||||||| || |||||||| || ||||| | ||||||||||||||||||||
Sbjct: 427 tgtagccacagatatcaggaccaaacatgatactgtatggtgtgtctccaccaaatttct 368
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
| ||||| |||||||||| || | || | ||||||||| |||||||||||||| ||||
Sbjct: 367 tttggtcaacatcaccacttagtagcttcatgtagccaccaccgcagtcaagcttttgct 308
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
||||||| || ||||| || | || | |||||| |||||||| ||||| |||||| | |
Sbjct: 307 cgtgcttgactgagaattggaagactaaggtcttgtccttgttactgaattcagggaact 248
Query: 1021 cggctgaaatggcatagaacctgta 1045
| ||||||||||| ||||| |||||
Sbjct: 247 cagctgaaatggcgtagaatctgta 223
>gb|AY086745.1| Arabidopsis thaliana clone 27210 mRNA, complete sequence
Length = 1532
Score = 137 bits (69), Expect = 5e-030
Identities = 171/205 (83%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||||||||| || |||||||| || ||||| | ||||||||||||||||||||
Sbjct: 501 tgtagccacagatatcaggaccaaacatgatactgtatggtgtgtctccaccaaatttct 442
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
| ||||| |||||||||| || | || | ||||||||| |||||||||||||| ||||
Sbjct: 441 tttggtcaacatcaccacttagtagcttcatgtagccaccaccgcagtcaagcttttgct 382
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
||||||| || ||||| || | || | |||||| |||||||| ||||| |||||| | |
Sbjct: 381 cgtgcttgactgagaattggaagactaaggtcttgtccttgttactgaattcagggaact 322
Query: 1021 cggctgaaatggcatagaacctgta 1045
| ||||||||||| ||||| |||||
Sbjct: 321 cagctgaaatggcgtagaatctgta 297
>ref|NM_100791.2| Arabidopsis thaliana calcium ion binding AT1G09210 mRNA, complete cds
Length = 1724
Score = 137 bits (69), Expect = 5e-030
Identities = 171/205 (83%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||||||||| || |||||||| || ||||| | ||||||||||||||||||||
Sbjct: 501 tgtagccacagatatcaggaccaaacatgatactgtatggtgtgtctccaccaaatttct 442
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
| ||||| |||||||||| || | || | ||||||||| |||||||||||||| ||||
Sbjct: 441 tttggtcaacatcaccacttagtagcttcatgtagccaccaccgcagtcaagcttttgct 382
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
||||||| || ||||| || | || | |||||| |||||||| ||||| |||||| | |
Sbjct: 381 cgtgcttgactgagaattggaagactaaggtcttgtccttgttactgaattcagggaact 322
Query: 1021 cggctgaaatggcatagaacctgta 1045
| ||||||||||| ||||| |||||
Sbjct: 321 cagctgaaatggcgtagaatctgta 297
>gb|T45719.1|T45719 8982 Lambda-PRL2 Arabidopsis thaliana cDNA clone 131G1T7, mRNA
sequence
Length = 479
Score = 131 bits (66), Expect = 3e-028
Identities = 170/205 (82%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||||||||| || |||||||| || ||||| | ||||||||||||||||||||
Sbjct: 292 tgtagccacagatatcaggaccaaacatgatactgtatggtgtgtctccaccaaatttct 233
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
| ||||| |||||||||| || | || | ||||||||| ||| |||||||||| ||||
Sbjct: 232 tttggtcaacatcaccacttagtagcttcatgtagccaccaccgnagtcaagcttttgct 173
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
||||||| || ||||| || | || | |||||| |||||||| ||||| |||||| | |
Sbjct: 172 cgtgcttgactgagaattggaagactaaggtcttgtccttgttactgaattcagggaact 113
Query: 1021 cggctgaaatggcatagaacctgta 1045
| ||||||||||| ||||| |||||
Sbjct: 112 cagctgaaatggcgtagaatctgta 88
>gb|AV831988.1|AV831988 AV831988 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-98-E08 5', mRNA
sequence
Length = 439
Score = 119 bits (60), Expect = 1e-024
Identities = 153/185 (82%)
Strand = Plus / Minus
Query: 861 ccaaacataatgctgtaagatgtgtctccaccaaatttcttctggtctacatcaccaccc 920
||||||| || ||||| | ||||||||||||||||||||| ||||| ||||||||||
Sbjct: 439 ccaaacangatactgtatggtgtgtctccaccaaatttcttttggtcaacatcaccactt 380
Query: 921 agcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgc 980
|| | || | ||||||||| |||||||||||||| ||||||||||| || ||||| ||
Sbjct: 379 agnagcttcangtagccaccaccgcagtcaagcttttgctcgtgcttgactgagaattgg 320
Query: 981 agcaccagggtcttatccttgttgctgaactcagggtattcggctgaaatggcatagaac 1040
| || | |||||| |||||||| ||||| |||||| | || ||||||||||| |||||
Sbjct: 319 aagactaaggtcttgtccttgttactgaattcagggaactcagctgaaatggcgtagaat 260
Query: 1041 ctgta 1045
|||||
Sbjct: 259 ctgta 255
>gb|AC069159.8|AC069159 Arabidopsis thaliana chromosome 1 BAC F14G9 genomic sequence, complete
sequence
Length = 111481
Score = 119 bits (60), Expect = 1e-024
Identities = 150/180 (83%)
Strand = Plus / Minus
Query: 873 ctgtaagatgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacg 932
||||||| |||||||| || |||||| ||||||| |||||| ||| ||||| || | |
Sbjct: 16450 ctgtaaggagtgtctcctccgaatttcgtctggtcaacatcatcacttagcaacttcatg 16391
Query: 933 tagccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtc 992
|||||||| || ||||||||||||||||| ||||| |||||||| || | || | ||||
Sbjct: 16390 tagccaccaccacagtcaagcttctgctcatgcttgacagagaattggaagactaaggtc 16331
Query: 993 ttatccttgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcg 1052
|||||||||||||| ||||||||| |||| ||||| || || ||||| ||||| ||||||
Sbjct: 16330 ttatccttgttgctaaactcagggaattcagctgatatagcgtagaatctgtagtcctcg 16271
Score = 46.1 bits (23), Expect = 0.014
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctg 875
|||| ||||| |||||||| |||||||||||||||
Sbjct: 16558 tgtagccacaaatatctggcccaaacataatgctg 16524
>gb|AC058785.8|AC058785 Arabidopsis thaliana chromosome 1 BAC F13N6 genomic sequence,
complete sequence
Length = 90698
Score = 119 bits (60), Expect = 1e-024
Identities = 150/180 (83%)
Strand = Plus / Plus
Query: 873 ctgtaagatgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacg 932
||||||| |||||||| || |||||| ||||||| |||||| ||| ||||| || | |
Sbjct: 1781 ctgtaaggagtgtctcctccgaatttcgtctggtcaacatcatcacttagcaacttcatg 1840
Query: 933 tagccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtc 992
|||||||| || ||||||||||||||||| ||||| |||||||| || | || | ||||
Sbjct: 1841 tagccaccaccacagtcaagcttctgctcatgcttgacagagaattggaagactaaggtc 1900
Query: 993 ttatccttgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcg 1052
|||||||||||||| ||||||||| |||| ||||| || || ||||| ||||| ||||||
Sbjct: 1901 ttatccttgttgctaaactcagggaattcagctgatatagcgtagaatctgtagtcctcg 1960
Score = 95.6 bits (48), Expect = 2e-017
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 911 atcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgcttcac 970
|||||||| ||||| || | ||||||||| || | ||||||||||||||| ||||| ||
Sbjct: 18920 atcaccactaagcaacttcatgtagccacccccaccgtcaagcttctgctcatgcttgac 18861
Query: 971 agagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcggctgaaat 1030
||||| || | || |||||||||||||||||||||||||||||| |||| ||||| ||
Sbjct: 18860 tgagaattggaagacaagggtcttatccttgttgctgaactcagggaattccgctgatat 18801
Query: 1031 ggcatagaacctgtaatcct 1050
|| ||||| ||||| ||||
Sbjct: 18800 agcgtagaatctgtagtcct 18781
Score = 46.1 bits (23), Expect = 0.014
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 841 tgtacccacagatatctggtccaaacataatgctg 875
|||| ||||| |||||||| |||||||||||||||
Sbjct: 1673 tgtagccacaaatatctggcccaaacataatgctg 1707
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 119 bits (60), Expect = 1e-024
Identities = 150/180 (83%)
Strand = Plus / Plus
Query: 873 ctgtaagatgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacg 932
||||||| |||||||| || |||||| ||||||| |||||| ||| ||||| || | |
Sbjct: 5451209 ctgtaaggagtgtctcctccgaatttcgtctggtcaacatcatcacttagcaacttcatg 5451268
Query: 933 tagccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtc 992
|||||||| || ||||||||||||||||| ||||| |||||||| || | || | ||||
Sbjct: 5451269 tagccaccaccacagtcaagcttctgctcatgcttgacagagaattggaagactaaggtc 5451328
Query: 993 ttatccttgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcg 1052
|||||||||||||| ||||||||| |||| ||||| || || ||||| ||||| ||||||
Sbjct: 5451329 ttatccttgttgctaaactcagggaattcagctgatatagcgtagaatctgtagtcctcg 5451388
Score = 95.6 bits (48), Expect = 2e-017
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 911 atcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgcttcac 970
|||||||| ||||| || | ||||||||| || | ||||||||||||||| ||||| ||
Sbjct: 5468348 atcaccactaagcaacttcatgtagccacccccaccgtcaagcttctgctcatgcttgac 5468289
Query: 971 agagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcggctgaaat 1030
||||| || | || |||||||||||||||||||||||||||||| |||| ||||| ||
Sbjct: 5468288 tgagaattggaagacaagggtcttatccttgttgctgaactcagggaattccgctgatat 5468229
Query: 1031 ggcatagaacctgtaatcct 1050
|| ||||| ||||| ||||
Sbjct: 5468228 agcgtagaatctgtagtcct 5468209
Score = 46.1 bits (23), Expect = 0.014
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 841 tgtacccacagatatctggtccaaacataatgctg 875
|||| ||||| |||||||| |||||||||||||||
Sbjct: 5451101 tgtagccacaaatatctggcccaaacataatgctg 5451135
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 119 bits (60), Expect = 1e-024
Identities = 150/180 (83%)
Strand = Plus / Plus
Query: 873 ctgtaagatgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacg 932
||||||| |||||||| || |||||| ||||||| |||||| ||| ||||| || | |
Sbjct: 21095433 ctgtaaggagtgtctcctccgaatttcgtctggtcaacatcatcacttagcaacttcatg 21095492
Query: 933 tagccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtc 992
|||||||| || ||||||||||||||||| ||||| |||||||| || | || | ||||
Sbjct: 21095493 tagccaccaccacagtcaagcttctgctcatgcttgacagagaattggaagactaaggtc 21095552
Query: 993 ttatccttgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcg 1052
|||||||||||||| ||||||||| |||| ||||| || || ||||| ||||| ||||||
Sbjct: 21095553 ttatccttgttgctaaactcagggaattcagctgatatagcgtagaatctgtagtcctcg 21095612
Score = 113 bits (57), Expect = 7e-023
Identities = 138/165 (83%)
Strand = Plus / Plus
Query: 881 tgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccacc 940
||||||||||||||||||||| ||||| |||||||||| || | || | |||||||||
Sbjct: 2975572 tgtgtctccaccaaatttcttttggtcaacatcaccacttagtagcttcatgtagccacc 2975631
Query: 941 gccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatcctt 1000
|||||||||||||| ||||||||||| || ||||| || | || | |||||| |||||
Sbjct: 2975632 accgcagtcaagcttttgctcgtgcttgactgagaattggaagactaaggtcttgtcctt 2975691
Query: 1001 gttgctgaactcagggtattcggctgaaatggcatagaacctgta 1045
||| ||||| |||||| | || ||||||||||| ||||| |||||
Sbjct: 2975692 gttactgaattcagggaactcagctgaaatggcgtagaatctgta 2975736
Score = 95.6 bits (48), Expect = 2e-017
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 911 atcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgcttcac 970
|||||||| ||||| || | ||||||||| || | ||||||||||||||| ||||| ||
Sbjct: 21112572 atcaccactaagcaacttcatgtagccacccccaccgtcaagcttctgctcatgcttgac 21112513
Query: 971 agagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcggctgaaat 1030
||||| || | || |||||||||||||||||||||||||||||| |||| ||||| ||
Sbjct: 21112512 tgagaattggaagacaagggtcttatccttgttgctgaactcagggaattccgctgatat 21112453
Query: 1031 ggcatagaacctgtaatcct 1050
|| ||||| ||||| ||||
Sbjct: 21112452 agcgtagaatctgtagtcct 21112433
Score = 46.1 bits (23), Expect = 0.014
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 841 tgtacccacagatatctggtccaaacataatgctg 875
|||| ||||| |||||||| |||||||||||||||
Sbjct: 21095325 tgtagccacaaatatctggcccaaacataatgctg 21095359
>gb|AV551838.1|AV551838 AV551838 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ14f12R 5', mRNA sequence
Length = 384
Score = 117 bits (59), Expect = 5e-024
Identities = 143/171 (83%)
Strand = Plus / Minus
Query: 882 gtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccg 941
|||||||| || |||||| ||||||| |||||| ||| ||||| || | |||||||||
Sbjct: 383 gtgtctcctccgaatttcgtctggtcaacatcatcacttagcaacttcatgtagccacca 324
Query: 942 ccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttg 1001
|| ||||||||||||||||| ||||| |||||||| || | || | |||||||||||||
Sbjct: 323 ccacagtcaagcttctgctcatgcttgacagagaattggaagactaaggtcttatccttg 264
Query: 1002 ttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcg 1052
||||| ||||||||| |||| ||||| || || ||||| ||||| ||||||
Sbjct: 263 ttgctaaactcagggaattcagctgatatagcgtagaatctgtagtcctcg 213
>emb|BX290352.1| Arabidopsis thaliana T-DNA flanking sequence GK-435F04-018190,
genomic survey sequence
Length = 408
Score = 115 bits (58), Expect = 2e-023
Identities = 142/170 (83%)
Strand = Plus / Plus
Query: 882 gtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccg 941
|||||||| || |||||| ||||||| |||||| ||| ||||| || | |||||||||
Sbjct: 29 gtgtctcctccgaatttcgtctggtcaacatcatcacttagcaacttcatgtagccacca 88
Query: 942 ccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttg 1001
|| ||||||||||||||||| ||||| |||||||| || | || | |||||||||||||
Sbjct: 89 ccacagtcaagcttctgctcatgcttgacagagaattggaagactaaggtcttatccttg 148
Query: 1002 ttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctc 1051
||||| ||||||||| |||| ||||| || || ||||| ||||| |||||
Sbjct: 149 ttgctaaactcagggaattcagctgatatagcgtagaatctgtagtcctc 198
>gb|U66344.1|ATU66344 Arabidopsis thaliana calreticulin (Crt2) gene, partial cds
Length = 2038
Score = 113 bits (57), Expect = 7e-023
Identities = 138/165 (83%)
Strand = Plus / Minus
Query: 881 tgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccacc 940
||||||||||||||||||||| ||||| |||||||||| || | || | |||||||||
Sbjct: 1805 tgtgtctccaccaaatttcttttggtcaacatcaccacttagtagcttcatgtagccacc 1746
Query: 941 gccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatcctt 1000
|||||||||||||| ||||||||||| || ||||| || | || | |||||| |||||
Sbjct: 1745 accgcagtcaagcttttgctcgtgcttgactgagaattggaagactaaggtcttgtcctt 1686
Query: 1001 gttgctgaactcagggtattcggctgaaatggcatagaacctgta 1045
||| ||||| |||||| | || ||||||||||| ||||| |||||
Sbjct: 1685 gttactgaattcagggaactcagctgaaatggcgtagaatctgta 1641
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 113 bits (57), Expect = 7e-023
Identities = 138/165 (83%)
Strand = Plus / Plus
Query: 881 tgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccacc 940
||||||||||||||||||||| ||||| |||||||||| || | || | |||||||||
Sbjct: 2975392 tgtgtctccaccaaatttcttttggtcaacatcaccacttagtagcttcatgtagccacc 2975451
Query: 941 gccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatcctt 1000
|||||||||||||| ||||||||||| || ||||| || | || | |||||| |||||
Sbjct: 2975452 accgcagtcaagcttttgctcgtgcttgactgagaattggaagactaaggtcttgtcctt 2975511
Query: 1001 gttgctgaactcagggtattcggctgaaatggcatagaacctgta 1045
||| ||||| |||||| | || ||||||||||| ||||| |||||
Sbjct: 2975512 gttactgaattcagggaactcagctgaaatggcgtagaatctgta 2975556
>gb|AC003114.1|T12M4 Arabidopsis thaliana chromosome 1 BAC T12M4 sequence, complete sequence
Length = 59261
Score = 113 bits (57), Expect = 7e-023
Identities = 138/165 (83%)
Strand = Plus / Minus
Query: 881 tgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccacc 940
||||||||||||||||||||| ||||| |||||||||| || | || | |||||||||
Sbjct: 26679 tgtgtctccaccaaatttcttttggtcaacatcaccacttagtagcttcatgtagccacc 26620
Query: 941 gccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatcctt 1000
|||||||||||||| ||||||||||| || ||||| || | || | |||||| |||||
Sbjct: 26619 accgcagtcaagcttttgctcgtgcttgactgagaattggaagactaaggtcttgtcctt 26560
Query: 1001 gttgctgaactcagggtattcggctgaaatggcatagaacctgta 1045
||| ||||| |||||| | || ||||||||||| ||||| |||||
Sbjct: 26559 gttactgaattcagggaactcagctgaaatggcgtagaatctgta 26515
>emb|BX290351.1| Arabidopsis thaliana T-DNA flanking sequence GK-435F04-018180,
genomic survey sequence
Length = 205
Score = 111 bits (56), Expect = 3e-022
Identities = 144/172 (83%), Gaps = 1/172 (0%)
Strand = Plus / Plus
Query: 882 gtgtctccaccaaatttct-tctggtctacatcaccacccagcaatttgacgtagccacc 940
|||||||| || ||||||| ||||||| |||||| ||| ||||| || | |||||||||
Sbjct: 29 gtgtctcctccgaatttctgtctggtcaacatcatcacttagcaacttcatgtagccacc 88
Query: 941 gccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatcctt 1000
|| ||||||||||||||||| ||||| |||||||| || | || | ||||||||||||
Sbjct: 89 accacagtcaagcttctgctcatgcttgacagagaattggaagactaaggtcttatcctt 148
Query: 1001 gttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcg 1052
|||||| ||||||||| |||| ||||| || || ||||| ||||| ||||||
Sbjct: 149 gttgctaaactcagggaattcagctgatatagcgtagaatctgtagtcctcg 200
>gb|AV526677.1|AV526677 AV526677 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ18h10R 5', mRNA
sequence
Length = 418
Score = 111 bits (56), Expect = 3e-022
Identities = 116/136 (85%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||||||||| || |||||||| || ||||| | ||||||||||||||||||||
Sbjct: 145 tgtagccacagatatcaggaccaaacatgatactgtatggtgtgtctccaccaaatttct 86
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
| ||||| |||||||||| || | || | ||||||||| |||||||||||||| ||||
Sbjct: 85 tttggtcaacatcaccacttagtagcttcatgtagccaccaccgcagtcaagcttttgct 26
Query: 961 cgtgcttcacagagaa 976
||||||| || |||||
Sbjct: 25 cgtgcttgactgagaa 10
>gb|AV550014.1|AV550014 AV550014 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ107a12R 5', mRNA sequence
Length = 543
Score = 111 bits (56), Expect = 3e-022
Identities = 116/136 (85%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||||||||| || |||||||| || ||||| | ||||||||||||||||||||
Sbjct: 153 tgtagccacagatatcaggaccaaacatgatactgtatggtgtgtctccaccaaatttct 94
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
| ||||| |||||||||| || | || | ||||||||| |||||||||||||| ||||
Sbjct: 93 tttggtcaacatcaccacttagtagcttcatgtagccaccaccgcagtcaagcttttgct 34
Query: 961 cgtgcttcacagagaa 976
||||||| || |||||
Sbjct: 33 cgtgcttgactgagaa 18
>gb|BP799343.1|BP799343 BP799343 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-10-K18 5',
mRNA sequence
Length = 413
Score = 107 bits (54), Expect = 5e-021
Identities = 142/170 (83%), Gaps = 1/170 (0%)
Strand = Plus / Minus
Query: 884 gtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgcc 943
|||||| || |||||||||||||| |||||| ||| ||||| || | ||||||||| ||
Sbjct: 413 gtctcctccgaatttcttctggtcaacatcatcacttagcaacttcatgtagccaccacc 354
Query: 944 gcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgtt 1003
||||||||||||||||| ||||| |||||||| || | || | |||||||||||||||
Sbjct: 353 acagtcaagcttctgctcatgcttgacagagaattggaagactaaggtcttatccttgtt 294
Query: 1004 gctgaa-ctcagggtattcggctgaaatggcatagaacctgtaatcctcg 1052
||| || ||||||| |||| ||||| || || ||||| ||||| ||||||
Sbjct: 293 gctaaagctcagggaattcagctgatatagcgtagaatctgtagtcctcg 244
>gb|CB263709.1|CB263709 11-E8878-008-014-E03-pBl2 MPIZ-ADIS-008 Arabidopsis thaliana cDNA
clone MPIZp767E0314Q 5-PRIME, mRNA sequence
Length = 293
Score = 103 bits (52), Expect = 7e-020
Identities = 115/136 (84%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||||||||| || ||||||| || ||||| | ||||||||||||||||||||
Sbjct: 160 tgtagccacagatatcaggcgcaaacatgatactgtatggtgtgtctccaccaaatttct 101
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
| ||||| |||||||||| || | || | ||||||||| |||||||||||||| ||||
Sbjct: 100 tttggtcaacatcaccacttagtagcttcatgtagccaccaccgcagtcaagcttttgct 41
Query: 961 cgtgcttcacagagaa 976
||||||| || |||||
Sbjct: 40 cgtgcttgactgagaa 25
>gb|CB252683.1|CB252683 19-E018362-019-007-F05-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768F057Q 5-PRIME, mRNA sequence
Length = 578
Score = 103 bits (52), Expect = 7e-020
Identities = 172/212 (81%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| |||| ||| ||||||||||||||||||| |||||||| | |||||
Sbjct: 280 tgtagccacaaatatttggcccaaacataatgctgtaaggagtgtctcctcagaattttg 221
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
| ||||| |||||| ||| ||||| || | ||||||||| || |||||||| |||||||
Sbjct: 220 tatggtccacatcatcacttagcaacttcatgtagccaccaccacagtcaagattctgct 161
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| |||||||| || | | | |||||||||||||||||| ||||||||| |||
Sbjct: 160 catgcttgacagagaattggaagagtaaggtcttatccttgttgctaaactcagggaatt 101
Query: 1021 cggctgaaatggcatagaacctgtaatcctcg 1052
| ||||| || | ||||| ||||| ||||||
Sbjct: 100 cagctgatatagagtagaatctgtagtcctcg 69
>gb|BP853525.1|BP853525 BP853525 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-58-I10 5',
mRNA sequence
Length = 401
Score = 101 bits (51), Expect = 3e-019
Identities = 133/159 (83%), Gaps = 1/159 (0%)
Strand = Plus / Minus
Query: 895 atttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagct 954
||||| ||||||| |||||| ||| ||||| || | ||||||||| || ||||||||||
Sbjct: 401 atttcgtctggtcaacatcatcacttagcaacttcatgtagccaccaccacagtcaagct 342
Query: 955 tctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcag 1014
||||||| ||||| |||||||| || | || | |||||||||||||||||| |||||||
Sbjct: 341 tctgctcatgcttgacagagaattggaagactaaggtcttatccttgttgctaaactcag 282
Query: 1015 ggtattc-ggctgaaatggcatagaacctgtaatcctcg 1052
|| |||| |||||| || || ||||| ||||| ||||||
Sbjct: 281 ggaattcaggctgatatagcgtagaatctgtagtcctcg 243
>gb|BP854754.1|BP854754 BP854754 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-24-F06 5',
mRNA sequence
Length = 390
Score = 99.6 bits (50), Expect = 1e-018
Identities = 104/122 (85%)
Strand = Plus / Minus
Query: 932 gtagccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggt 991
||||||||| || ||||||||||||||||| ||||| |||||||| || | || | |||
Sbjct: 362 gtagccaccaccacagtcaagcttctgctcatgcttgacagagaattggaagactaaggt 303
Query: 992 cttatccttgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctc 1051
||||||||||||||| ||||||||| |||| ||||| || || ||||| ||||| |||||
Sbjct: 302 cttatccttgttgctaaactcagggaattcagctgatatagcgtagaatctgtagtcctc 243
Query: 1052 gg 1053
||
Sbjct: 242 gg 241
>gb|BP856079.1|BP856079 BP856079 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-28-M10 5',
mRNA sequence
Length = 400
Score = 99.6 bits (50), Expect = 1e-018
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 895 atttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagct 954
||||| ||||||| |||||| ||| ||||| || | ||||||||| || ||||||||||
Sbjct: 400 atttcgtctggtcaacatcatcacttagcaacttcatgtagccaccaccacagtcaagct 341
Query: 955 tctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcag 1014
||||||| ||||| |||||||| || | || | |||||||||||| ||||| |||||||
Sbjct: 340 tctgctcatgcttgacagagaattggaagactaaggtcttatcctttttgctaaactcag 281
Query: 1015 ggtattcggctgaaatggcatagaacctgtaatcctcg 1052
|| |||| ||||| || || ||||| ||||| ||||||
Sbjct: 280 ggaattcagctgatatagcgtagaatctgtagtcctcg 243
>gb|BP800468.1|BP800468 BP800468 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-15-I05 5',
mRNA sequence
Length = 373
Score = 97.6 bits (49), Expect = 4e-018
Identities = 103/121 (85%)
Strand = Plus / Minus
Query: 932 gtagccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggt 991
||||||||| || ||||||||||||||||| ||||| |||||||| || | || | |||
Sbjct: 362 gtagccaccaccacagtcaagcttctgctcatgcttgacagagaattggaagactaaggt 303
Query: 992 cttatccttgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctc 1051
||||||||||||||| ||||||||| |||| ||||| || || ||||| ||||| |||||
Sbjct: 302 cttatccttgttgctaaactcagggaattcagctgatatagcgtagaatctgtagtcctc 243
Query: 1052 g 1052
|
Sbjct: 242 g 242
>gb|BP818037.1|BP818037 BP818037 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-46-M15 5',
mRNA sequence
Length = 394
Score = 97.6 bits (49), Expect = 4e-018
Identities = 103/121 (85%)
Strand = Plus / Minus
Query: 932 gtagccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggt 991
||||||||| || ||||||||||||||||| ||||| |||||||| || | || | |||
Sbjct: 366 gtagccaccaccacagtcaagcttctgctcatgcttgacagagaattggaagactaaggt 307
Query: 992 cttatccttgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctc 1051
||||||||||||||| ||||||||| |||| ||||| || || ||||| ||||| |||||
Sbjct: 306 cttatccttgttgctaaactcagggaattcagctgatatagcgtagaatctgtagtcctc 247
Query: 1052 g 1052
|
Sbjct: 246 g 246
>gb|BP836178.1|BP836178 BP836178 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-15-K11 5',
mRNA sequence
Length = 390
Score = 97.6 bits (49), Expect = 4e-018
Identities = 104/121 (85%), Gaps = 1/121 (0%)
Strand = Plus / Minus
Query: 932 gtagccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggt 991
||||||||| || ||||||||||||||||| ||||| |||||||| || || || | |||
Sbjct: 363 gtagccaccaccacagtcaagcttctgctcatgcttgacagagaattgaag-actaaggt 305
Query: 992 cttatccttgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctc 1051
||||||||||||||| ||||||||| |||| ||||| || || ||||| ||||| |||||
Sbjct: 304 cttatccttgttgctaaactcagggaattcagctgatatagcgtagaatctgtagtcctc 245
Query: 1052 g 1052
|
Sbjct: 244 g 244
>gb|BP852953.1|BP852953 BP852953 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-21-K03 5',
mRNA sequence
Length = 376
Score = 97.6 bits (49), Expect = 4e-018
Identities = 103/121 (85%)
Strand = Plus / Minus
Query: 932 gtagccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggt 991
||||||||| || ||||||||||||||||| ||||| |||||||| || | || | |||
Sbjct: 362 gtagccaccaccacagtcaagcttctgctcatgcttgacagagaattggaagactaaggt 303
Query: 992 cttatccttgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctc 1051
||||||||||||||| ||||||||| |||| ||||| || || ||||| ||||| |||||
Sbjct: 302 cttatccttgttgctaaactcagggaattcagctgatatagcgtagaatctgtagtcctc 243
Query: 1052 g 1052
|
Sbjct: 242 g 242
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 448,627
Number of Sequences: 1013581
Number of extensions: 448627
Number of successful extensions: 29909
Number of sequences better than 0.5: 101
Number of HSP's better than 0.5 without gapping: 99
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 28990
Number of HSP's gapped (non-prelim): 830
length of query: 1238
length of database: 908,940,872
effective HSP length: 20
effective length of query: 1218
effective length of database: 888,669,252
effective search space: 1082399148936
effective search space used: 1082399148936
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)