BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.448
(911 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AA597749.1|AA597749 29333 Lambda-PRL2 Arabidopsis thalia... 178 1e-042
gb|BE037545.1|BE037545 AA01A06 AA Arabidopsis thaliana cDNA... 178 1e-042
gb|BE038613.1|BE038613 AB01H05 AB Arabidopsis thaliana cDNA... 178 1e-042
gb|BE038827.1|BE038827 AB04G03 AB Arabidopsis thaliana cDNA... 178 1e-042
gb|AV784120.1|AV784120 AV784120 RAFL5 Arabidopsis thaliana ... 178 1e-042
gb|AV823191.1|AV823191 AV823191 RAFL5 Arabidopsis thaliana ... 178 1e-042
gb|CA781266.1|CA781266 014B04AF Infected Arabidopsis Leaf A... 178 1e-042
gb|AV530843.1|AV530843 AV530843 Arabidopsis thaliana flower... 178 1e-042
gb|AV532062.1|AV532062 AV532062 Arabidopsis thaliana flower... 178 1e-042
gb|AV538084.1|AV538084 AV538084 Arabidopsis thaliana roots ... 178 1e-042
gb|AV538711.1|AV538711 AV538711 Arabidopsis thaliana roots ... 178 1e-042
gb|AV544758.1|AV544758 AV544758 Arabidopsis thaliana roots ... 178 1e-042
gb|AV553255.1|AV553255 AV553255 Arabidopsis thaliana roots ... 178 1e-042
gb|AV565619.1|AV565619 AV565619 Arabidopsis thaliana green ... 178 1e-042
gb|BP563336.1|BP563336 BP563336 RAFL14 Arabidopsis thaliana... 178 1e-042
gb|BP564615.1|BP564615 BP564615 RAFL14 Arabidopsis thaliana... 178 1e-042
gb|BP570282.1|BP570282 BP570282 RAFL14 Arabidopsis thaliana... 178 1e-042
gb|BP571507.1|BP571507 BP571507 RAFL14 Arabidopsis thaliana... 178 1e-042
gb|BP582590.1|BP582590 BP582590 RAFL14 Arabidopsis thaliana... 178 1e-042
gb|BP584508.1|BP584508 BP584508 RAFL14 Arabidopsis thaliana... 178 1e-042
gb|BP593823.1|BP593823 BP593823 RAFL15 Arabidopsis thaliana... 178 1e-042
gb|BP595618.1|BP595618 BP595618 RAFL15 Arabidopsis thaliana... 178 1e-042
gb|BP597545.1|BP597545 BP597545 RAFL15 Arabidopsis thaliana... 178 1e-042
gb|BP607962.1|BP607962 BP607962 RAFL16 Arabidopsis thaliana... 178 1e-042
gb|BP619574.1|BP619574 BP619574 RAFL16 Arabidopsis thaliana... 178 1e-042
gb|BP638304.1|BP638304 BP638304 RAFL19 Arabidopsis thaliana... 178 1e-042
gb|BP638880.1|BP638880 BP638880 RAFL19 Arabidopsis thaliana... 178 1e-042
gb|BP644028.1|BP644028 BP644028 RAFL19 Arabidopsis thaliana... 178 1e-042
gb|BP787497.1|BP787497 BP787497 RAFL7 Arabidopsis thaliana ... 178 1e-042
gb|BP789183.1|BP789183 BP789183 RAFL7 Arabidopsis thaliana ... 178 1e-042
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 178 1e-042
gb|AY048221.1| Arabidopsis thaliana At1g04270/F19P19_29 mRN... 178 1e-042
gb|AY091703.1| Arabidopsis thaliana At1g04270/F19P19_29 mRN... 178 1e-042
gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsi... 178 1e-042
emb|BX817406.1|CNS0ACK0 Arabidopsis thaliana Full-length cD... 178 1e-042
emb|Z23161.1|ATRBPS15A A.thaliana ribosomal protein S15 mRN... 178 1e-042
emb|Z23162.1|ATRBPS15B A.thaliana H1flk-3 gene, 3' end, and... 178 1e-042
ref|NM_100308.2| Arabidopsis thaliana RPS15 (RIBOSOMAL PROT... 178 1e-042
ref|NM_001035879.1| Arabidopsis thaliana RPS15 (RIBOSOMAL P... 178 1e-042
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 178 1e-042
gb|AV814593.1|AV814593 AV814593 RAFL9 Arabidopsis thaliana ... 176 4e-042
gb|BP671919.1|BP671919 BP671919 RAFL21 Arabidopsis thaliana... 176 4e-042
gb|BP566825.1|BP566825 BP566825 RAFL14 Arabidopsis thaliana... 170 3e-040
gb|BP583991.1|BP583991 BP583991 RAFL14 Arabidopsis thaliana... 170 3e-040
gb|BP594448.1|BP594448 BP594448 RAFL15 Arabidopsis thaliana... 170 3e-040
gb|BP648711.1|BP648711 BP648711 RAFL19 Arabidopsis thaliana... 170 3e-040
gb|BP651032.1|BP651032 BP651032 RAFL19 Arabidopsis thaliana... 170 3e-040
gb|AV790069.1|AV790069 AV790069 RAFL6 Arabidopsis thaliana ... 168 1e-039
gb|BP624306.1|BP624306 BP624306 RAFL17 Arabidopsis thaliana... 168 1e-039
gb|BP632135.1|BP632135 BP632135 RAFL17 Arabidopsis thaliana... 168 1e-039
gb|AA712740.1|AA712740 32299 Lambda-PRL2 Arabidopsis thalia... 167 4e-039
gb|AV536604.1|AV536604 AV536604 Arabidopsis thaliana liquid... 167 4e-039
gb|BP623778.1|BP623778 BP623778 RAFL17 Arabidopsis thaliana... 167 4e-039
gb|BP577273.1|BP577273 BP577273 RAFL14 Arabidopsis thaliana... 165 2e-038
gb|BP646287.1|BP646287 BP646287 RAFL19 Arabidopsis thaliana... 165 2e-038
gb|BP650819.1|BP650819 BP650819 RAFL19 Arabidopsis thaliana... 165 2e-038
gb|BP564344.1|BP564344 BP564344 RAFL14 Arabidopsis thaliana... 163 7e-038
gb|BP577470.1|BP577470 BP577470 RAFL14 Arabidopsis thaliana... 163 7e-038
gb|BP618355.1|BP618355 BP618355 RAFL16 Arabidopsis thaliana... 163 7e-038
gb|BP639587.1|BP639587 BP639587 RAFL19 Arabidopsis thaliana... 163 7e-038
emb|X91962.1|AT40SRS15 A.thaliana mRNA for 40S ribosomal pr... 163 7e-038
gb|BP625067.1|BP625067 BP625067 RAFL17 Arabidopsis thaliana... 161 3e-037
gb|BP626011.1|BP626011 BP626011 RAFL17 Arabidopsis thaliana... 161 3e-037
gb|BP644385.1|BP644385 BP644385 RAFL19 Arabidopsis thaliana... 161 3e-037
gb|BP644772.1|BP644772 BP644772 RAFL19 Arabidopsis thaliana... 159 1e-036
gb|AV787809.1|AV787809 AV787809 RAFL6 Arabidopsis thaliana ... 157 4e-036
gb|BP642003.1|BP642003 BP642003 RAFL19 Arabidopsis thaliana... 157 4e-036
gb|BP647548.1|BP647548 BP647548 RAFL19 Arabidopsis thaliana... 157 4e-036
gb|BP640396.1|BP640396 BP640396 RAFL19 Arabidopsis thaliana... 155 2e-035
gb|BP656135.1|BP656135 BP656135 RAFL19 Arabidopsis thaliana... 155 2e-035
gb|BP657150.1|BP657150 BP657150 RAFL19 Arabidopsis thaliana... 155 2e-035
gb|BP669875.1|BP669875 BP669875 RAFL21 Arabidopsis thaliana... 155 2e-035
gb|AV553829.1|AV553829 AV553829 Arabidopsis thaliana roots ... 153 6e-035
gb|BP590157.1|BP590157 BP590157 RAFL15 Arabidopsis thaliana... 153 6e-035
gb|AV794154.1|AV794154 AV794154 RAFL8 Arabidopsis thaliana ... 151 2e-034
gb|BP628741.1|BP628741 BP628741 RAFL17 Arabidopsis thaliana... 147 4e-033
gb|BP630049.1|BP630049 BP630049 RAFL17 Arabidopsis thaliana... 147 4e-033
gb|BZ769940.1|BZ769940 SALK_142874.53.50.x Arabidopsis thal... 143 6e-032
gb|CD531488.1|CD531488 10P20 Arabidopsis Leaf Senescence Li... 139 1e-030
gb|BE039272.1|BE039272 AC01D03 AC Arabidopsis thaliana cDNA... 137 4e-030
gb|AV826432.1|AV826432 AV826432 RAFL8 Arabidopsis thaliana ... 137 4e-030
gb|AV535553.1|AV535553 AV535553 Arabidopsis thaliana flower... 137 4e-030
gb|AV537607.1|AV537607 AV537607 Arabidopsis thaliana roots ... 137 4e-030
gb|AV544220.1|AV544220 AV544220 Arabidopsis thaliana roots ... 137 4e-030
gb|AV549585.1|AV549585 AV549585 Arabidopsis thaliana roots ... 137 4e-030
gb|AV553671.1|AV553671 AV553671 Arabidopsis thaliana roots ... 137 4e-030
gb|BP566550.1|BP566550 BP566550 RAFL14 Arabidopsis thaliana... 137 4e-030
gb|BP592451.1|BP592451 BP592451 RAFL15 Arabidopsis thaliana... 137 4e-030
gb|BP632732.1|BP632732 BP632732 RAFL17 Arabidopsis thaliana... 137 4e-030
gb|BP663835.1|BP663835 BP663835 RAFL21 Arabidopsis thaliana... 137 4e-030
gb|AY050966.1| Arabidopsis thaliana putative ribosomal prot... 137 4e-030
gb|AY096616.1| Arabidopsis thaliana putative ribosomal prot... 137 4e-030
gb|AY085630.1| Arabidopsis thaliana clone 164 mRNA, complet... 137 4e-030
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 137 4e-030
emb|AL391712.1|ATT5E8 Arabidopsis thaliana DNA chromosome 5... 137 4e-030
ref|NM_120988.2| Arabidopsis thaliana structural constituen... 137 4e-030
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 137 4e-030
gb|BP592430.1|BP592430 BP592430 RAFL15 Arabidopsis thaliana... 135 1e-029
gb|T21856.1|T21856 3864 Lambda-PRL2 Arabidopsis thaliana cD... 131 2e-028
gb|CB261315.1|CB261315 08-E9573-012-004-P02-T7R MPIZ-ADIS-0... 131 2e-028
gb|CB261515.1|CB261515 32-E020823-012-004-P02q-T7R MPIZ-ADI... 131 2e-028
gb|Z17791.1|Z17791 ATTS0365 Gif-SeedA+B Arabidopsis thalian... 131 2e-028
gb|AV545466.1|AV545466 AV545466 Arabidopsis thaliana roots ... 129 9e-028
gb|BP642920.1|BP642920 BP642920 RAFL19 Arabidopsis thaliana... 129 9e-028
gb|BP648892.1|BP648892 BP648892 RAFL19 Arabidopsis thaliana... 127 4e-027
gb|BE038861.1|BE038861 AB05B09 AB Arabidopsis thaliana cDNA... 121 2e-025
gb|AV559935.1|AV559935 AV559935 Arabidopsis thaliana green ... 121 2e-025
gb|BP637705.1|BP637705 BP637705 RAFL19 Arabidopsis thaliana... 119 9e-025
gb|BP670504.1|BP670504 BP670504 RAFL21 Arabidopsis thaliana... 119 9e-025
gb|AV535648.1|AV535648 AV535648 Arabidopsis thaliana flower... 113 5e-023
dbj|AB016875.1| Arabidopsis thaliana genomic DNA, chromosom... 111 2e-022
ref|NM_123730.1| Arabidopsis thaliana structural constituen... 111 2e-022
gb|BP569334.1|BP569334 BP569334 RAFL14 Arabidopsis thaliana... 109 8e-022
gb|AQ956828.1|AQ956828 LERAM31TF LERA Arabidopsis thaliana ... 105 1e-020
gb|AQ956829.1|AQ956829 LERAM31TR LERA Arabidopsis thaliana ... 105 1e-020
gb|AW004145.1|AW004145 701500185 A. thaliana, Ohio State cl... 105 1e-020
gb|BP581489.1|BP581489 BP581489 RAFL14 Arabidopsis thaliana... 105 1e-020
gb|AA713022.1|AA713022 32584 Lambda-PRL2 Arabidopsis thalia... 103 5e-020
gb|BP853164.1|BP853164 BP853164 RAFL21 Arabidopsis thaliana... 100 8e-019
gb|N37540.1|N37540 18767 Lambda-PRL2 Arabidopsis thaliana c... 98 3e-018
gb|BP654930.1|BP654930 BP654930 RAFL19 Arabidopsis thaliana... 98 3e-018
gb|AV533902.1|AV533902 AV533902 Arabidopsis thaliana flower... 96 1e-017
gb|BH214207.1|BH214207 SALK_010406 Arabidopsis thaliana TDN... 92 2e-016
gb|BH251399.1|BH251399 SALK_011527 Arabidopsis thaliana TDN... 90 8e-016
gb|AU235816.1|AU235816 AU235816 RAFL14 Arabidopsis thaliana... 90 8e-016
emb|AJ553533.1|ATH553533 Arabidopsis thaliana T-DNA flankin... 90 8e-016
gb|BT010135.1| Arabidopsis thaliana At5g09500 gene, complet... 90 8e-016
ref|NM_120987.2| Arabidopsis thaliana structural constituen... 90 8e-016
gb|N65110.1|N65110 20150 Lambda-PRL2 Arabidopsis thaliana c... 80 8e-013
gb|BP567001.1|BP567001 BP567001 RAFL14 Arabidopsis thaliana... 80 8e-013
gb|BP565113.1|BP565113 BP565113 RAFL14 Arabidopsis thaliana... 78 3e-012
gb|BP641726.1|BP641726 BP641726 RAFL19 Arabidopsis thaliana... 78 3e-012
gb|AV555142.1|AV555142 AV555142 Arabidopsis thaliana green ... 76 1e-011
gb|BP805620.1|BP805620 BP805620 RAFL16 Arabidopsis thaliana... 74 5e-011
gb|AY086958.1| Arabidopsis thaliana clone 29963 mRNA, compl... 68 3e-009
gb|BP844755.1|BP844755 BP844755 RAFL21 Arabidopsis thaliana... 66 1e-008
emb|AL755805.1| Arabidopsis thaliana T-DNA flanking sequenc... 64 5e-008
emb|AL755807.1| Arabidopsis thaliana T-DNA flanking sequenc... 64 5e-008
gb|BP836703.1|BP836703 BP836703 RAFL19 Arabidopsis thaliana... 64 5e-008
dbj|AB008265.1| Arabidopsis thaliana genomic DNA, chromosom... 64 5e-008
gb|DQ056736.1| Arabidopsis thaliana putative 40S ribosomal ... 64 5e-008
ref|NM_125701.1| Arabidopsis thaliana structural constituen... 64 5e-008
ref|NM_120986.2| Arabidopsis thaliana structural constituen... 60 7e-007
gb|BZ292978.1|BZ292978 SALK_129050.48.35.x Arabidopsis thal... 58 3e-006
gb|R29788.1|R29788 12393 Lambda-PRL2 Arabidopsis thaliana c... 56 1e-005
gb|BP596175.1|BP596175 BP596175 RAFL15 Arabidopsis thaliana... 56 1e-005
gb|BP815278.1|BP815278 BP815278 RAFL19 Arabidopsis thaliana... 56 1e-005
emb|AL083094.1|CNS00OE0 Arabidopsis thaliana genome survey ... 54 4e-005
gb|BZ761659.1|BZ761659 SALK_074986.53.30.x Arabidopsis thal... 54 4e-005
gb|BZ764832.1|BZ764832 SALK_127097.45.65.n Arabidopsis thal... 54 4e-005
gb|AV536598.1|AV536598 AV536598 Arabidopsis thaliana liquid... 54 4e-005
gb|BP797475.1|BP797475 BP797475 RAFL14 Arabidopsis thaliana... 54 4e-005
gb|BP799546.1|BP799546 BP799546 RAFL14 Arabidopsis thaliana... 54 4e-005
gb|BP812124.1|BP812124 BP812124 RAFL19 Arabidopsis thaliana... 54 4e-005
gb|BP815011.1|BP815011 BP815011 RAFL19 Arabidopsis thaliana... 54 4e-005
gb|BP827322.1|BP827322 BP827322 RAFL19 Arabidopsis thaliana... 54 4e-005
gb|BP831621.1|BP831621 BP831621 RAFL19 Arabidopsis thaliana... 54 4e-005
gb|BP832815.1|BP832815 BP832815 RAFL19 Arabidopsis thaliana... 54 4e-005
gb|BP840222.1|BP840222 BP840222 RAFL19 Arabidopsis thaliana... 54 4e-005
gb|BP849184.1|BP849184 BP849184 RAFL21 Arabidopsis thaliana... 54 4e-005
gb|BP853893.1|BP853893 BP853893 RAFL21 Arabidopsis thaliana... 54 4e-005
gb|BP854001.1|BP854001 BP854001 RAFL21 Arabidopsis thaliana... 54 4e-005
gb|BP865592.1|BP865592 BP865592 RAFL21 Arabidopsis thaliana... 54 4e-005
gb|BP818160.1|BP818160 BP818160 RAFL19 Arabidopsis thaliana... 52 2e-004
gb|CB260534.1|CB260534 87-E9572-012-004-N21-T7R MPIZ-ADIS-0... 50 7e-004
gb|AC010164.2|AC010164 Arabidopsis thaliana chromosome I BA... 48 0.003
gb|AC022288.5|AC022288 Arabidopsis thaliana chromosome 1 BA... 48 0.003
ref|NM_103107.1| Arabidopsis thaliana structural constituen... 48 0.003
emb|BX003147.1| Arabidopsis thaliana T-DNA flanking sequenc... 46 0.011
gb|BP579821.1|BP579821 BP579821 RAFL14 Arabidopsis thaliana... 46 0.011
gb|BP585087.1|BP585087 BP585087 RAFL15 Arabidopsis thaliana... 44 0.042
gb|BP799430.1|BP799430 BP799430 RAFL14 Arabidopsis thaliana... 44 0.042
gb|BP799490.1|BP799490 BP799490 RAFL14 Arabidopsis thaliana... 44 0.042
gb|BP803741.1|BP803741 BP803741 RAFL14 Arabidopsis thaliana... 44 0.042
gb|BP855680.1|BP855680 BP855680 RAFL21 Arabidopsis thaliana... 44 0.042
>gb|AA597749.1|AA597749 29333 Lambda-PRL2 Arabidopsis thaliana cDNA clone 225G7T7, mRNA
sequence
Length = 452
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Minus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| || |||
Sbjct: 260 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagaaaac 201
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 200 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 141
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| ||||||||||||||||||||||| |||||||||||
Sbjct: 140 ttgtacactccaatgatgcttccaatcatctcagggacgatgatcatgtt 91
>gb|BE037545.1|BE037545 AA01A06 AA Arabidopsis thaliana cDNA 5' similar to 40s ribosomal
protein s15, mRNA sequence
Length = 758
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Minus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 529 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 470
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 469 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 410
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 409 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 360
>gb|BE038613.1|BE038613 AB01H05 AB Arabidopsis thaliana cDNA 5' similar to ribosomal
protein s15, mRNA sequence
Length = 709
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Minus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 489 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 430
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 429 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 370
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 369 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 320
>gb|BE038827.1|BE038827 AB04G03 AB Arabidopsis thaliana cDNA 5' similar to 40s ribosomal
protein s15, mRNA sequence
Length = 729
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 275 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 334
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 335 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 394
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 395 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 444
>gb|AV784120.1|AV784120 AV784120 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-16-H14 3',
mRNA sequence
Length = 683
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 205 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 264
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 265 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 324
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 325 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 374
>gb|AV823191.1|AV823191 AV823191 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-16-H14 5',
mRNA sequence
Length = 649
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Minus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 526 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 467
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 466 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 407
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 406 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 357
>gb|CA781266.1|CA781266 014B04AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 665
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Minus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 474 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 415
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 414 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 355
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 354 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 305
>gb|AV530843.1|AV530843 AV530843 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB010d01F 3', mRNA sequence
Length = 508
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 263 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 322
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 323 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 382
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 383 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 432
>gb|AV532062.1|AV532062 AV532062 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB035a04F 3', mRNA sequence
Length = 508
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 206 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 265
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 266 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 325
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 326 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 375
>gb|AV538084.1|AV538084 AV538084 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ11b11F 3', mRNA sequence
Length = 620
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 207 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 266
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 267 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 326
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 327 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 376
Score = 105 bits (53), Expect = 1e-020
Identities = 95/109 (87%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 83 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 142
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttga 496
||||| |||||||| || ||||||||||||||||| |||||| ||||||
Sbjct: 143 tcagccaggtagtgaccaatcatctcaggcttgatttcaaccaggttga 191
Score = 56.0 bits (28), Expect = 1e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 470 tctcaggcttgatctcaacctggttgaa 497
||||||||||||||||||||||||||||
Sbjct: 205 tctcaggcttgatctcaacctggttgaa 178
>gb|AV538711.1|AV538711 AV538711 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ120a09F 3', mRNA sequence
Length = 597
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 206 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 265
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 266 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 325
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 326 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 375
>gb|AV544758.1|AV544758 AV544758 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ58c02F 3', mRNA sequence
Length = 651
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 202 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 261
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 262 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 321
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 322 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 371
>gb|AV553255.1|AV553255 AV553255 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ58c02R 5', mRNA sequence
Length = 575
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Minus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 494 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 435
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 434 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 375
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 374 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 325
>gb|AV565619.1|AV565619 AV565619 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ227f09F 3', mRNA sequence
Length = 596
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 274 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 333
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 334 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 393
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 394 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 443
>gb|BP563336.1|BP563336 BP563336 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-01-O20 3',
mRNA sequence
Length = 431
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 210 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 269
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 270 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 329
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 330 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 379
>gb|BP564615.1|BP564615 BP564615 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-08-I18 3',
mRNA sequence
Length = 435
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 262 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 321
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 322 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 381
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 382 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 431
>gb|BP570282.1|BP570282 BP570282 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-72-B04 3',
mRNA sequence
Length = 476
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 206 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 265
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 266 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 325
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 326 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 375
>gb|BP571507.1|BP571507 BP571507 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-76-I11 3',
mRNA sequence
Length = 461
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 206 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 265
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 266 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 325
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 326 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 375
>gb|BP582590.1|BP582590 BP582590 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-36-N16 3',
mRNA sequence
Length = 455
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 141 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 200
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 201 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 260
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 261 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 310
>gb|BP584508.1|BP584508 BP584508 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-46-J23 3',
mRNA sequence
Length = 423
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 141 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 200
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 201 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 260
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 261 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 310
>gb|BP593823.1|BP593823 BP593823 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-23-J06 3',
mRNA sequence
Length = 460
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 206 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 265
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 266 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 325
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 326 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 375
>gb|BP595618.1|BP595618 BP595618 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-30-N09 3',
mRNA sequence
Length = 427
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 211 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 270
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 271 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 330
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 331 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 380
>gb|BP597545.1|BP597545 BP597545 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-40-A07 3',
mRNA sequence
Length = 424
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 206 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 265
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 266 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 325
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 326 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 375
>gb|BP607962.1|BP607962 BP607962 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-76-N23 3',
mRNA sequence
Length = 429
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 130 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 189
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 190 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 249
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 250 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 299
>gb|BP619574.1|BP619574 BP619574 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-33-M09 3',
mRNA sequence
Length = 451
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 137 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 196
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 197 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 256
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 257 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 306
>gb|BP638304.1|BP638304 BP638304 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-09-B11 3',
mRNA sequence
Length = 415
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 206 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 265
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 266 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 325
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 326 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 375
>gb|BP638880.1|BP638880 BP638880 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-45-E02 3',
mRNA sequence
Length = 383
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 206 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 265
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 266 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 325
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 326 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 375
>gb|BP644028.1|BP644028 BP644028 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-64-A19 3',
mRNA sequence
Length = 379
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 206 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 265
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 266 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 325
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 326 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 375
>gb|BP787497.1|BP787497 BP787497 RAFL7 Arabidopsis thaliana cDNA clone RAFL26-04-I04 3',
mRNA sequence
Length = 429
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 200 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 259
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 260 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 319
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 320 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 369
>gb|BP789183.1|BP789183 BP789183 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-37-E15 3',
mRNA sequence
Length = 418
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 200 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 259
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 260 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 319
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 320 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 369
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 1141952 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 1142011
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 1142012 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 1142071
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 1142072 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 1142121
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 712 gtggacatgtcgagaagcgcatctaggtcgac 743
||||||||||||||||||||||| || |||||
Sbjct: 12296886 gtggacatgtcgagaagcgcatcgagatcgac 12296917
>gb|AY048221.1| Arabidopsis thaliana At1g04270/F19P19_29 mRNA, complete cds
Length = 729
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Minus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 525 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 466
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 465 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 406
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 405 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 356
>gb|AY091703.1| Arabidopsis thaliana At1g04270/F19P19_29 mRNA, complete cds
Length = 459
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Minus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 434 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 375
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 374 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 315
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 314 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 265
>gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis thaliana chromosome 1, complete
sequence
Length = 107527
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Minus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 91327 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 91268
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 91267 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 91208
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 91207 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 91158
>emb|BX817406.1|CNS0ACK0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL20ZD06 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 695
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Minus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 489 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 430
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 429 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 370
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 369 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 320
>emb|Z23161.1|ATRBPS15A A.thaliana ribosomal protein S15 mRNA, complete CDS
Length = 668
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Minus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 463 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 404
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 403 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 344
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 343 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 294
>emb|Z23162.1|ATRBPS15B A.thaliana H1flk-3 gene, 3' end, and ribosomal protein S15 gene,
complete CDS
Length = 2780
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Minus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 2203 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 2144
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 2143 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 2084
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 2083 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 2034
>ref|NM_100308.2| Arabidopsis thaliana RPS15 (RIBOSOMAL PROTEIN S15); structural
constituent of ribosome AT1G04270 (RPS15) transcript
variant AT1G04270.1 mRNA, complete cds
Length = 798
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Minus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 525 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 466
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 465 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 406
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 405 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 356
>ref|NM_001035879.1| Arabidopsis thaliana RPS15 (RIBOSOMAL PROTEIN S15); structural
constituent of ribosome AT1G04270 (RPS15) transcript
variant AT1G04270.2 mRNA, complete cds
Length = 795
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Minus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 522 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 463
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 462 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 403
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 402 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 353
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 178 bits (90), Expect = 1e-042
Identities = 150/170 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 1141876 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 1141935
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 1141936 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 1141995
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 1141996 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 1142045
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 712 gtggacatgtcgagaagcgcatctaggtcgac 743
||||||||||||||||||||||| || |||||
Sbjct: 12288090 gtggacatgtcgagaagcgcatcgagatcgac 12288121
>gb|AV814593.1|AV814593 AV814593 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-83-I12 3',
mRNA sequence
Length = 409
Score = 176 bits (89), Expect = 4e-042
Identities = 149/169 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 241 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 300
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 301 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 360
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgt 556
||||| || |||| |||||||||||||| |||||||| ||||||||||
Sbjct: 361 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgt 409
>gb|BP671919.1|BP671919 BP671919 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-42-E16 3',
mRNA sequence
Length = 424
Score = 176 bits (89), Expect = 4e-042
Identities = 149/169 (88%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 200 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 259
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 260 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 319
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgt 556
||||| || |||| |||||||||||||| |||||||| ||||||||||
Sbjct: 320 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgt 368
>gb|BP566825.1|BP566825 BP566825 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-55-H07 3',
mRNA sequence
Length = 411
Score = 170 bits (86), Expect = 3e-040
Identities = 149/170 (87%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | | | ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 206 gagtgggtagcaccaacaacaggcctaccgtgcttgaccggcttgtatgagatagagaac 265
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 266 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 325
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 326 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 375
>gb|BP583991.1|BP583991 BP583991 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-44-G03 3',
mRNA sequence
Length = 415
Score = 170 bits (86), Expect = 3e-040
Identities = 149/170 (87%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 207 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 266
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| || || |||
Sbjct: 267 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtttttccg 326
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 327 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 376
>gb|BP594448.1|BP594448 BP594448 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-25-O18 3',
mRNA sequence
Length = 459
Score = 170 bits (86), Expect = 3e-040
Identities = 149/170 (87%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||| | ||||||
Sbjct: 135 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgaggtagagaac 194
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 195 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 254
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 255 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 304
>gb|BP648711.1|BP648711 BP648711 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-10-M16 3',
mRNA sequence
Length = 385
Score = 170 bits (86), Expect = 3e-040
Identities = 149/170 (87%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| | |||||||||||||| || ||||| ||||||
Sbjct: 205 gagtgggtagcaccaacaccaggcctaacgtgcttgaccggcttgtatgagatagagaac 264
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 265 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 324
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 325 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 374
>gb|BP651032.1|BP651032 BP651032 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-86-O18 3',
mRNA sequence
Length = 389
Score = 170 bits (86), Expect = 3e-040
Identities = 149/170 (87%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || ||||||||||||| || ||||| ||||||
Sbjct: 206 gagtgggtagcaccaacaccaggcctaccgggcttgaccggcttgtatgagatagagaac 265
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 266 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 325
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtt 557
||||| || |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 326 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgtt 375
>gb|AV790069.1|AV790069 AV790069 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-86-P18 3',
mRNA sequence
Length = 404
Score = 168 bits (85), Expect = 1e-039
Identities = 148/169 (87%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||| | | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 233 gagtgggtagcagcaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 292
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 293 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 352
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgt 556
||||| || |||| |||||||||||||| |||||||| ||||||||||
Sbjct: 353 ttgtacactccaatgatgcttccaatcatttcagggacgatgatcatgt 401
>gb|BP624306.1|BP624306 BP624306 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-39-L22 3',
mRNA sequence
Length = 426
Score = 168 bits (85), Expect = 1e-039
Identities = 145/165 (87%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 262 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 321
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 322 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 381
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatc 552
||||| || |||| |||||||||||||| |||||||| ||||||
Sbjct: 382 ttgtacactccaatgatgcttccaatcatttcagggacgatgatc 426
>gb|BP632135.1|BP632135 BP632135 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-26-B10 3',
mRNA sequence
Length = 364
Score = 168 bits (85), Expect = 1e-039
Identities = 145/165 (87%)
Strand = Plus / Plus
Query: 388 gagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaac 447
|||||||| ||||| | ||| ||||| || |||||||||||||| || ||||| ||||||
Sbjct: 200 gagtgggtagcaccaacaccaggcctaccgtgcttgaccggcttgtatgagatagagaac 259
Query: 448 tcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccg 507
||||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 260 tcagccaggtagtgaccaatcatctcaggcttgatctcaacctggttgaaagtctttccg 319
Query: 508 ttgtagaccccaacaatgcttccaatcatctcagggacaatgatc 552
||||| || |||| |||||||||||||| |||||||| ||||||
Sbjct: 320 ttgtacactccaatgatgcttccaatcatttcagggacgatgatc 364
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 444,551
Number of Sequences: 1013581
Number of extensions: 444551
Number of successful extensions: 34201
Number of sequences better than 0.5: 175
Number of HSP's better than 0.5 without gapping: 177
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 32281
Number of HSP's gapped (non-prelim): 1790
length of query: 911
length of database: 908,940,872
effective HSP length: 20
effective length of query: 891
effective length of database: 888,669,252
effective search space: 791804303532
effective search space used: 791804303532
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)