BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.288
(1775 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU635349.1|BU635349 020H03 Infected Arabidopsis Leaf Ara... 92 4e-016
gb|AV541794.1|AV541794 AV541794 Arabidopsis thaliana roots ... 92 4e-016
gb|AV559810.1|AV559810 AV559810 Arabidopsis thaliana green ... 92 4e-016
gb|AF428338.1|AF428338 Arabidopsis thaliana AT5g66680/MSN2_... 92 4e-016
gb|AY150381.1| Arabidopsis thaliana putative dolichyl-di-ph... 92 4e-016
gb|AY085807.1| Arabidopsis thaliana clone 18419 mRNA, compl... 92 4e-016
emb|BX831189.1|CNS09YSI Arabidopsis thaliana Full-length cD... 92 4e-016
emb|BX831000.1|CNS0A0SR Arabidopsis thaliana Full-length cD... 92 4e-016
ref|NM_126066.3| Arabidopsis thaliana DGL1; dolichyl-diphos... 92 4e-016
gb|AY034944.1| Arabidopsis thaliana putative dolichyl-di-ph... 84 1e-013
gb|CL463944.1|CL463944 SAIL_1210_F08.v1 SAIL Collection Ara... 76 2e-011
dbj|AB018119.1| Arabidopsis thaliana genomic DNA, chromosom... 76 2e-011
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 76 2e-011
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 76 2e-011
emb|BX832898.1|CNS0A0F3 Arabidopsis thaliana Full-length cD... 66 2e-008
gb|AV783247.1|AV783247 AV783247 RAFL5 Arabidopsis thaliana ... 62 4e-007
gb|AV791692.1|AV791692 AV791692 RAFL7 Arabidopsis thaliana ... 62 4e-007
gb|AV792945.1|AV792945 AV792945 RAFL7 Arabidopsis thaliana ... 62 4e-007
gb|AV797929.1|AV797929 AV797929 RAFL9 Arabidopsis thaliana ... 62 4e-007
gb|AV809092.1|AV809092 AV809092 RAFL9 Arabidopsis thaliana ... 62 4e-007
gb|AV813063.1|AV813063 AV813063 RAFL9 Arabidopsis thaliana ... 62 4e-007
gb|AV813637.1|AV813637 AV813637 RAFL9 Arabidopsis thaliana ... 62 4e-007
gb|AV440737.1|AV440737 AV440737 Arabidopsis thaliana above-... 62 4e-007
gb|AV538812.1|AV538812 AV538812 Arabidopsis thaliana roots ... 62 4e-007
gb|BP563274.1|BP563274 BP563274 RAFL14 Arabidopsis thaliana... 62 4e-007
gb|BP566046.1|BP566046 BP566046 RAFL14 Arabidopsis thaliana... 62 4e-007
gb|BP570017.1|BP570017 BP570017 RAFL14 Arabidopsis thaliana... 62 4e-007
gb|BP573855.1|BP573855 BP573855 RAFL14 Arabidopsis thaliana... 62 4e-007
gb|BP579972.1|BP579972 BP579972 RAFL14 Arabidopsis thaliana... 62 4e-007
gb|BP581925.1|BP581925 BP581925 RAFL14 Arabidopsis thaliana... 62 4e-007
gb|BP585485.1|BP585485 BP585485 RAFL15 Arabidopsis thaliana... 62 4e-007
gb|BP587696.1|BP587696 BP587696 RAFL15 Arabidopsis thaliana... 62 4e-007
gb|BP588586.1|BP588586 BP588586 RAFL15 Arabidopsis thaliana... 62 4e-007
gb|BP593465.1|BP593465 BP593465 RAFL15 Arabidopsis thaliana... 62 4e-007
gb|BP596827.1|BP596827 BP596827 RAFL15 Arabidopsis thaliana... 62 4e-007
gb|BP597175.1|BP597175 BP597175 RAFL15 Arabidopsis thaliana... 62 4e-007
gb|BP609163.1|BP609163 BP609163 RAFL16 Arabidopsis thaliana... 62 4e-007
gb|BP614087.1|BP614087 BP614087 RAFL16 Arabidopsis thaliana... 62 4e-007
gb|BP617561.1|BP617561 BP617561 RAFL16 Arabidopsis thaliana... 62 4e-007
gb|BP629190.1|BP629190 BP629190 RAFL17 Arabidopsis thaliana... 62 4e-007
gb|BP631889.1|BP631889 BP631889 RAFL17 Arabidopsis thaliana... 62 4e-007
gb|BP647297.1|BP647297 BP647297 RAFL19 Arabidopsis thaliana... 62 4e-007
gb|BP778186.1|BP778186 BP778186 RAFL7 Arabidopsis thaliana ... 62 4e-007
gb|BP778208.1|BP778208 BP778208 RAFL7 Arabidopsis thaliana ... 62 4e-007
gb|BP783452.1|BP783452 BP783452 RAFL7 Arabidopsis thaliana ... 62 4e-007
gb|BP783581.1|BP783581 BP783581 RAFL7 Arabidopsis thaliana ... 62 4e-007
gb|BP787806.1|BP787806 BP787806 RAFL7 Arabidopsis thaliana ... 62 4e-007
gb|BP790587.1|BP790587 BP790587 RAFL7 Arabidopsis thaliana ... 62 4e-007
gb|BP793887.1|BP793887 BP793887 RAFL7 Arabidopsis thaliana ... 62 4e-007
gb|BP794192.1|BP794192 BP794192 RAFL7 Arabidopsis thaliana ... 62 4e-007
gb|BE528349.1|BE528349 M79G08STM Arabidopsis developing see... 58 5e-006
gb|AV822470.1|AV822470 AV822470 RAFL5 Arabidopsis thaliana ... 58 5e-006
gb|BE525092.1|BE525092 M58D6STM Arabidopsis developing seed... 56 2e-005
gb|AV829748.1|AV829748 AV829748 RAFL9 Arabidopsis thaliana ... 56 2e-005
gb|BP569638.1|BP569638 BP569638 RAFL14 Arabidopsis thaliana... 56 2e-005
gb|BP597390.1|BP597390 BP597390 RAFL15 Arabidopsis thaliana... 56 2e-005
gb|BP646002.1|BP646002 BP646002 RAFL19 Arabidopsis thaliana... 56 2e-005
gb|BE521932.1|BE521932 M22E6XTM Arabidopsis developing seed... 54 9e-005
gb|BE525094.1|BE525094 M58D8STM Arabidopsis developing seed... 54 9e-005
gb|AV567201.1|AV567201 AV567201 Arabidopsis thaliana green ... 54 9e-005
gb|BP583158.1|BP583158 BP583158 RAFL14 Arabidopsis thaliana... 54 9e-005
gb|BP594644.1|BP594644 BP594644 RAFL15 Arabidopsis thaliana... 54 9e-005
emb|AL089416.1|CNS00T9M Arabidopsis thaliana genome survey ... 52 3e-004
gb|AI100233.1|AI100233 34608 Lambda-PRL2 Arabidopsis thalia... 50 0.001
gb|BP566678.1|BP566678 BP566678 RAFL14 Arabidopsis thaliana... 50 0.001
gb|BP572789.1|BP572789 BP572789 RAFL14 Arabidopsis thaliana... 50 0.001
gb|BP576056.1|BP576056 BP576056 RAFL14 Arabidopsis thaliana... 50 0.001
gb|BP589381.1|BP589381 BP589381 RAFL15 Arabidopsis thaliana... 50 0.001
gb|BP636887.1|BP636887 BP636887 RAFL19 Arabidopsis thaliana... 50 0.001
gb|BP671008.1|BP671008 BP671008 RAFL21 Arabidopsis thaliana... 48 0.005
gb|BP569728.1|BP569728 BP569728 RAFL14 Arabidopsis thaliana... 46 0.021
gb|BP569918.1|BP569918 BP569918 RAFL14 Arabidopsis thaliana... 46 0.021
gb|BP578343.1|BP578343 BP578343 RAFL14 Arabidopsis thaliana... 46 0.021
gb|BP629881.1|BP629881 BP629881 RAFL17 Arabidopsis thaliana... 46 0.021
gb|BP627595.1|BP627595 BP627595 RAFL17 Arabidopsis thaliana... 44 0.082
>gb|BU635349.1|BU635349 020H03 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 747
Score = 91.7 bits (46), Expect = 4e-016
Identities = 115/138 (83%)
Strand = Plus / Plus
Query: 1014 gatgacctggaatactctgttgagatctatgaatggtccggaacaagctggaagccgtat 1073
||||||||||||| ||||| ||||| ||||| ||||| |||| |||||| ||||||||
Sbjct: 241 gatgacctggaattttctgtagagatatatgagtggtcaggaaagagctgggagccgtat 300
Query: 1074 gttgctgatgatgtgcagcttcaatttttcatgatgagcccttacgttctgaaaactatg 1133
|||||| | ||||||||| |||| |||| |||||||||||| || || ||||||| ||
Sbjct: 301 gttgctaacgatgtgcaggttcagttttacatgatgagcccgtatgtgttgaaaaccctg 360
Query: 1134 tcgactgacaacaagggt 1151
|| || ||||| ||||||
Sbjct: 361 tcaacagacaagaagggt 378
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 475 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 521
Score = 46.1 bits (23), Expect = 0.021
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 913 taagcaaatgggttttccatgagaggggacatctaaaggctgttaat 959
||||||||||||| ||||| || ||||| ||||| ||||||| ||||
Sbjct: 140 taagcaaatgggtcttccacgaaaggggccatctgaaggctggtaat 186
>gb|AV541794.1|AV541794 AV541794 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ171e01F 3', mRNA sequence
Length = 582
Score = 91.7 bits (46), Expect = 4e-016
Identities = 115/138 (83%)
Strand = Plus / Minus
Query: 1014 gatgacctggaatactctgttgagatctatgaatggtccggaacaagctggaagccgtat 1073
||||||||||||| ||||| ||||| ||||| ||||| |||| |||||| ||||||||
Sbjct: 563 gatgacctggaattttctgtagagatatatgagtggtcaggaaagagctgggagccgtat 504
Query: 1074 gttgctgatgatgtgcagcttcaatttttcatgatgagcccttacgttctgaaaactatg 1133
|||||| | ||||||||| |||| |||| |||||||||||| || || ||||||| ||
Sbjct: 503 gttgctaacgatgtgcaggttcagttttacatgatgagcccgtatgtgttgaaaaccctg 444
Query: 1134 tcgactgacaacaagggt 1151
|| || ||||| ||||||
Sbjct: 443 tcaacagacaagaagggt 426
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 329 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 283
>gb|AV559810.1|AV559810 AV559810 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ124b03F 3', mRNA sequence
Length = 590
Score = 91.7 bits (46), Expect = 4e-016
Identities = 115/138 (83%)
Strand = Plus / Minus
Query: 1014 gatgacctggaatactctgttgagatctatgaatggtccggaacaagctggaagccgtat 1073
||||||||||||| ||||| ||||| ||||| ||||| |||| |||||| ||||||||
Sbjct: 561 gatgacctggaattttctgtagagatatatgagtggtcaggaaagagctgggagccgtat 502
Query: 1074 gttgctgatgatgtgcagcttcaatttttcatgatgagcccttacgttctgaaaactatg 1133
|||||| | ||||||||| |||| |||| |||||||||||| || || ||||||| ||
Sbjct: 501 gttgctaacgatgtgcaggttcagttttacatgatgagcccgtatgtgttgaaaaccctg 442
Query: 1134 tcgactgacaacaagggt 1151
|| || ||||| ||||||
Sbjct: 441 tcaacagacaagaagggt 424
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 327 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 281
>gb|AF428338.1|AF428338 Arabidopsis thaliana AT5g66680/MSN2_7 mRNA, complete cds
Length = 1544
Score = 91.7 bits (46), Expect = 4e-016
Identities = 115/138 (83%)
Strand = Plus / Plus
Query: 1014 gatgacctggaatactctgttgagatctatgaatggtccggaacaagctggaagccgtat 1073
||||||||||||| ||||| ||||| ||||| ||||| |||| |||||| ||||||||
Sbjct: 984 gatgacctggaattttctgtagagatatatgagtggtcaggaaagagctgggagccgtat 1043
Query: 1074 gttgctgatgatgtgcagcttcaatttttcatgatgagcccttacgttctgaaaactatg 1133
|||||| | ||||||||| |||| |||| |||||||||||| || || ||||||| ||
Sbjct: 1044 gttgctaacgatgtgcaggttcagttttacatgatgagcccgtatgtgttgaaaaccctg 1103
Query: 1134 tcgactgacaacaagggt 1151
|| || ||||| ||||||
Sbjct: 1104 tcaacagacaagaagggt 1121
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 1218 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 1264
Score = 58.0 bits (29), Expect = 5e-006
Identities = 89/109 (81%)
Strand = Plus / Plus
Query: 450 attgcaacagagtgtggggttgattttgatgaggatccagaggcaatggttattgaccat 509
||||| |||||||||||||||||||| ||||||||| | || ||||||||||| |||
Sbjct: 420 attgccacagagtgtggggttgatttcgatgaggattcttcagctatggttattgatcat 479
Query: 510 atgaactatgccgtcacagatgttgaaggtgatcacaccttgattgctg 558
| | || ||||| | |||||||| || || ||||||||||||||||
Sbjct: 480 actagcttctccgtctctgatgttgacggcgaccacaccttgattgctg 528
Score = 54.0 bits (27), Expect = 9e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 661 tggttctgaaggttctatcagcctctccatcagcatattcagctaatccaa 711
||||| |||| ||||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 631 tggttttgaaagttctttcagcctctccatcagcttattctgctaacccaa 681
Score = 46.1 bits (23), Expect = 0.021
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 913 taagcaaatgggttttccatgagaggggacatctaaaggctgttaat 959
||||||||||||| ||||| || ||||| ||||| ||||||| ||||
Sbjct: 883 taagcaaatgggtcttccacgaaaggggccatctgaaggctggtaat 929
>gb|AY150381.1| Arabidopsis thaliana putative dolichyl-di-phosphooligosaccharide
glycotransferase (oligosaccharyltransferase) (At5g66680)
mRNA, complete cds
Length = 1345
Score = 91.7 bits (46), Expect = 4e-016
Identities = 115/138 (83%)
Strand = Plus / Plus
Query: 1014 gatgacctggaatactctgttgagatctatgaatggtccggaacaagctggaagccgtat 1073
||||||||||||| ||||| ||||| ||||| ||||| |||| |||||| ||||||||
Sbjct: 943 gatgacctggaattttctgtagagatatatgagtggtcaggaaagagctgggagccgtat 1002
Query: 1074 gttgctgatgatgtgcagcttcaatttttcatgatgagcccttacgttctgaaaactatg 1133
|||||| | ||||||||| |||| |||| |||||||||||| || || ||||||| ||
Sbjct: 1003 gttgctaacgatgtgcaggttcagttttacatgatgagcccgtatgtgttgaaaaccctg 1062
Query: 1134 tcgactgacaacaagggt 1151
|| || ||||| ||||||
Sbjct: 1063 tcaacagacaagaagggt 1080
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 1177 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 1223
Score = 58.0 bits (29), Expect = 5e-006
Identities = 89/109 (81%)
Strand = Plus / Plus
Query: 450 attgcaacagagtgtggggttgattttgatgaggatccagaggcaatggttattgaccat 509
||||| |||||||||||||||||||| ||||||||| | || ||||||||||| |||
Sbjct: 379 attgccacagagtgtggggttgatttcgatgaggattcttcagctatggttattgatcat 438
Query: 510 atgaactatgccgtcacagatgttgaaggtgatcacaccttgattgctg 558
| | || ||||| | |||||||| || || ||||||||||||||||
Sbjct: 439 actagcttctccgtctctgatgttgacggcgaccacaccttgattgctg 487
Score = 54.0 bits (27), Expect = 9e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 661 tggttctgaaggttctatcagcctctccatcagcatattcagctaatccaa 711
||||| |||| ||||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 590 tggttttgaaagttctttcagcctctccatcagcttattctgctaacccaa 640
Score = 46.1 bits (23), Expect = 0.021
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 913 taagcaaatgggttttccatgagaggggacatctaaaggctgttaat 959
||||||||||||| ||||| || ||||| ||||| ||||||| ||||
Sbjct: 842 taagcaaatgggtcttccacgaaaggggccatctgaaggctggtaat 888
>gb|AY085807.1| Arabidopsis thaliana clone 18419 mRNA, complete sequence
Length = 1540
Score = 91.7 bits (46), Expect = 4e-016
Identities = 115/138 (83%)
Strand = Plus / Plus
Query: 1014 gatgacctggaatactctgttgagatctatgaatggtccggaacaagctggaagccgtat 1073
||||||||||||| ||||| ||||| ||||| ||||| |||| |||||| ||||||||
Sbjct: 982 gatgacctggaattttctgtagagatatatgagtggtcaggaaagagctgggagccgtat 1041
Query: 1074 gttgctgatgatgtgcagcttcaatttttcatgatgagcccttacgttctgaaaactatg 1133
|||||| | ||||||||| |||| |||| |||||||||||| || || ||||||| ||
Sbjct: 1042 gttgctaacgatgtgcaggttcagttttacatgatgagcccgtatgtgttgaaaaccctg 1101
Query: 1134 tcgactgacaacaagggt 1151
|| || ||||| ||||||
Sbjct: 1102 tcaacagacaagaagggt 1119
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 1216 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 1262
Score = 58.0 bits (29), Expect = 5e-006
Identities = 89/109 (81%)
Strand = Plus / Plus
Query: 450 attgcaacagagtgtggggttgattttgatgaggatccagaggcaatggttattgaccat 509
||||| |||||||||||||||||||| ||||||||| | || ||||||||||| |||
Sbjct: 418 attgccacagagtgtggggttgatttcgatgaggattcttcagctatggttattgatcat 477
Query: 510 atgaactatgccgtcacagatgttgaaggtgatcacaccttgattgctg 558
| | || ||||| | |||||||| || || ||||||||||||||||
Sbjct: 478 actagcttctccgtctctgatgttgacggcgaccacaccttgattgctg 526
Score = 54.0 bits (27), Expect = 9e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 661 tggttctgaaggttctatcagcctctccatcagcatattcagctaatccaa 711
||||| |||| ||||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 629 tggttttgaaagttctttcagcctctccatcagcttattctgctaacccaa 679
Score = 46.1 bits (23), Expect = 0.021
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 913 taagcaaatgggttttccatgagaggggacatctaaaggctgttaat 959
||||||||||||| ||||| || ||||| ||||| ||||||| ||||
Sbjct: 881 taagcaaatgggtcttccacgaaaggggccatctgaaggctggtaat 927
>emb|BX831189.1|CNS09YSI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS67ZA03 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1510
Score = 91.7 bits (46), Expect = 4e-016
Identities = 115/138 (83%)
Strand = Plus / Plus
Query: 1014 gatgacctggaatactctgttgagatctatgaatggtccggaacaagctggaagccgtat 1073
||||||||||||| ||||| ||||| ||||| ||||| |||| |||||| ||||||||
Sbjct: 983 gatgacctggaattttctgtagagatatatgagtggtcaggaaagagctgggagccgtat 1042
Query: 1074 gttgctgatgatgtgcagcttcaatttttcatgatgagcccttacgttctgaaaactatg 1133
|||||| | ||||||||| |||| |||| |||||||||||| || || ||||||| ||
Sbjct: 1043 gttgctaacgatgtgcaggttcagttttacatgatgagcccgtatgtgttgaaaaccctg 1102
Query: 1134 tcgactgacaacaagggt 1151
|| || ||||| ||||||
Sbjct: 1103 tcaacagacaagaagggt 1120
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 1217 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 1263
Score = 58.0 bits (29), Expect = 5e-006
Identities = 89/109 (81%)
Strand = Plus / Plus
Query: 450 attgcaacagagtgtggggttgattttgatgaggatccagaggcaatggttattgaccat 509
||||| |||||||||||||||||||| ||||||||| | || ||||||||||| |||
Sbjct: 419 attgccacagagtgtggggttgatttcgatgaggattcttcagctatggttattgatcat 478
Query: 510 atgaactatgccgtcacagatgttgaaggtgatcacaccttgattgctg 558
| | || ||||| | |||||||| || || ||||||||||||||||
Sbjct: 479 actagcttctccgtctctgatgttgacggcgaccacaccttgattgctg 527
Score = 54.0 bits (27), Expect = 9e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 661 tggttctgaaggttctatcagcctctccatcagcatattcagctaatccaa 711
||||| |||| ||||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 630 tggttttgaaagttctttcagcctctccatcagcttattctgctaacccaa 680
Score = 46.1 bits (23), Expect = 0.021
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 913 taagcaaatgggttttccatgagaggggacatctaaaggctgttaat 959
||||||||||||| ||||| || ||||| ||||| ||||||| ||||
Sbjct: 882 taagcaaatgggtcttccacgaaaggggccatctgaaggctggtaat 928
>emb|BX831000.1|CNS0A0SR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS47ZF06 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1640
Score = 91.7 bits (46), Expect = 4e-016
Identities = 115/138 (83%)
Strand = Plus / Plus
Query: 1014 gatgacctggaatactctgttgagatctatgaatggtccggaacaagctggaagccgtat 1073
||||||||||||| ||||| ||||| ||||| ||||| |||| |||||| ||||||||
Sbjct: 971 gatgacctggaattttctgtagagatatatgagtggtcaggaaagagctgggagccgtat 1030
Query: 1074 gttgctgatgatgtgcagcttcaatttttcatgatgagcccttacgttctgaaaactatg 1133
|||||| | ||||||||| |||| |||| |||||||||||| || || ||||||| ||
Sbjct: 1031 gttgctaacgatgtgcaggttcagttttacatgatgagcccgtatgtgttgaaaaccctg 1090
Query: 1134 tcgactgacaacaagggt 1151
|| || ||||| ||||||
Sbjct: 1091 tcaacagacaagaagggt 1108
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 1205 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 1251
Score = 58.0 bits (29), Expect = 5e-006
Identities = 89/109 (81%)
Strand = Plus / Plus
Query: 450 attgcaacagagtgtggggttgattttgatgaggatccagaggcaatggttattgaccat 509
||||| |||||||||||||||||||| ||||||||| | || ||||||||||| |||
Sbjct: 406 attgccacagagtgtggggttgatttcgatgaggattcttcagctatggttattgatcat 465
Query: 510 atgaactatgccgtcacagatgttgaaggtgatcacaccttgattgctg 558
| | || ||||| | |||||||| || || ||||||||||||||||
Sbjct: 466 actagcttctccgtctctgatgttgacggcgaccacaccttgattgctg 514
Score = 48.1 bits (24), Expect = 0.005
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 672 gttctatcagcctctccatcagcatattcagctaatccaa 711
||||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 629 gttctttcagcctctccatcagcttattctgctaacccaa 668
Score = 46.1 bits (23), Expect = 0.021
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 913 taagcaaatgggttttccatgagaggggacatctaaaggctgttaat 959
||||||||||||| ||||| || ||||| ||||| ||||||| ||||
Sbjct: 870 taagcaaatgggtcttccacgaaaggggccatctgaaggctggtaat 916
>ref|NM_126066.3| Arabidopsis thaliana DGL1; dolichyl-diphosphooligosaccharide-protein
glycotransferase AT5G66680 (DGL1) mRNA, complete cds
Length = 1696
Score = 91.7 bits (46), Expect = 4e-016
Identities = 115/138 (83%)
Strand = Plus / Plus
Query: 1014 gatgacctggaatactctgttgagatctatgaatggtccggaacaagctggaagccgtat 1073
||||||||||||| ||||| ||||| ||||| ||||| |||| |||||| ||||||||
Sbjct: 1029 gatgacctggaattttctgtagagatatatgagtggtcaggaaagagctgggagccgtat 1088
Query: 1074 gttgctgatgatgtgcagcttcaatttttcatgatgagcccttacgttctgaaaactatg 1133
|||||| | ||||||||| |||| |||| |||||||||||| || || ||||||| ||
Sbjct: 1089 gttgctaacgatgtgcaggttcagttttacatgatgagcccgtatgtgttgaaaaccctg 1148
Query: 1134 tcgactgacaacaagggt 1151
|| || ||||| ||||||
Sbjct: 1149 tcaacagacaagaagggt 1166
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 1263 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 1309
Score = 58.0 bits (29), Expect = 5e-006
Identities = 89/109 (81%)
Strand = Plus / Plus
Query: 450 attgcaacagagtgtggggttgattttgatgaggatccagaggcaatggttattgaccat 509
||||| |||||||||||||||||||| ||||||||| | || ||||||||||| |||
Sbjct: 465 attgccacagagtgtggggttgatttcgatgaggattcttcagctatggttattgatcat 524
Query: 510 atgaactatgccgtcacagatgttgaaggtgatcacaccttgattgctg 558
| | || ||||| | |||||||| || || ||||||||||||||||
Sbjct: 525 actagcttctccgtctctgatgttgacggcgaccacaccttgattgctg 573
Score = 54.0 bits (27), Expect = 9e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 661 tggttctgaaggttctatcagcctctccatcagcatattcagctaatccaa 711
||||| |||| ||||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 676 tggttttgaaagttctttcagcctctccatcagcttattctgctaacccaa 726
Score = 46.1 bits (23), Expect = 0.021
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 913 taagcaaatgggttttccatgagaggggacatctaaaggctgttaat 959
||||||||||||| ||||| || ||||| ||||| ||||||| ||||
Sbjct: 928 taagcaaatgggtcttccacgaaaggggccatctgaaggctggtaat 974
>gb|AY034944.1| Arabidopsis thaliana putative
dolichyl-di-phosphooligosaccharide-protein
glycotransferase (At5g66680) mRNA, complete cds
Length = 1608
Score = 83.8 bits (42), Expect = 1e-013
Identities = 114/138 (82%)
Strand = Plus / Plus
Query: 1014 gatgacctggaatactctgttgagatctatgaatggtccggaacaagctggaagccgtat 1073
||||||||||||| ||||| ||||| ||||| ||||| |||| |||||| ||||||||
Sbjct: 1029 gatgacctggaattttctgtagagatatatgagtggtcaggaaagagctgggagccgtat 1088
Query: 1074 gttgctgatgatgtgcagcttcaatttttcatgatgagcccttacgttctgaaaactatg 1133
|||||| | | ||||||| |||| |||| |||||||||||| || || ||||||| ||
Sbjct: 1089 gttgctaacggtgtgcaggttcagttttacatgatgagcccgtatgtgttgaaaaccctg 1148
Query: 1134 tcgactgacaacaagggt 1151
|| || ||||| ||||||
Sbjct: 1149 tcaacagacaagaagggt 1166
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 1263 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 1309
Score = 58.0 bits (29), Expect = 5e-006
Identities = 89/109 (81%)
Strand = Plus / Plus
Query: 450 attgcaacagagtgtggggttgattttgatgaggatccagaggcaatggttattgaccat 509
||||| |||||||||||||||||||| ||||||||| | || ||||||||||| |||
Sbjct: 465 attgccacagagtgtggggttgatttcgatgaggattcttcagctatggttattgatcat 524
Query: 510 atgaactatgccgtcacagatgttgaaggtgatcacaccttgattgctg 558
| | || ||||| | |||||||| || || ||||||||||||||||
Sbjct: 525 actagcttctccgtctctgatgttgacggcgaccacaccttgattgctg 573
Score = 54.0 bits (27), Expect = 9e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 661 tggttctgaaggttctatcagcctctccatcagcatattcagctaatccaa 711
||||| |||| ||||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 676 tggttttgaaagttctttcagcctctccatcagcttattctgctaacccaa 726
Score = 46.1 bits (23), Expect = 0.021
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 913 taagcaaatgggttttccatgagaggggacatctaaaggctgttaat 959
||||||||||||| ||||| || ||||| ||||| ||||||| ||||
Sbjct: 928 taagcaaatgggtcttccacgaaaggggccatctgaaggctggtaat 974
>gb|CL463944.1|CL463944 SAIL_1210_F08.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_1210_F08.v1, DNA sequence
Length = 932
Score = 75.8 bits (38), Expect = 2e-011
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 1029 tctgttgagatctatgaatggtccggaacaagctggaagccgtatgttgctgatgatgtg 1088
||||| ||||| ||||| ||||| |||| |||||| |||||||||||||| | ||||||
Sbjct: 143 tctgtagagatatatgagtggtcaggaaagagctgggagccgtatgttgctaacgatgtg 202
Query: 1089 cagcttcaatttttcatgatgagccc 1114
||| |||| |||| ||||||||||||
Sbjct: 203 caggttcagttttacatgatgagccc 228
Score = 48.1 bits (24), Expect = 0.005
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1267 cttacagacataatgagtatgagagatt 1294
|||||||||| |||||||||||||||||
Sbjct: 577 cttacagacacaatgagtatgagagatt 604
>dbj|AB018119.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSN2
Length = 62927
Score = 75.8 bits (38), Expect = 2e-011
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 1029 tctgttgagatctatgaatggtccggaacaagctggaagccgtatgttgctgatgatgtg 1088
||||| ||||| ||||| ||||| |||| |||||| |||||||||||||| | ||||||
Sbjct: 23907 tctgtagagatatatgagtggtcaggaaagagctgggagccgtatgttgctaacgatgtg 23848
Query: 1089 cagcttcaatttttcatgatgagccc 1114
||| |||| |||| ||||||||||||
Sbjct: 23847 caggttcagttttacatgatgagccc 23822
Score = 58.0 bits (29), Expect = 5e-006
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 1250 gcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 23490 gcagattccggtgcggccttacagacacaatgagtatgagagatt 23446
Score = 52.0 bits (26), Expect = 3e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 450 attgcaacagagtgtggggttgattttgatgagg 483
||||| |||||||||||||||||||| |||||||
Sbjct: 25518 attgccacagagtgtggggttgatttcgatgagg 25485
Score = 52.0 bits (26), Expect = 3e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 662 ggttctgaaggttctatcagcctctccatcagcatattcagctaatccaa 711
|||| |||| ||||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 24930 ggttttgaaagttctttcagcctctccatcagcttattctgctaacccaa 24881
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 75.8 bits (38), Expect = 2e-011
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 1029 tctgttgagatctatgaatggtccggaacaagctggaagccgtatgttgctgatgatgtg 1088
||||| ||||| ||||| ||||| |||| |||||| |||||||||||||| | ||||||
Sbjct: 23516575 tctgtagagatatatgagtggtcaggaaagagctgggagccgtatgttgctaacgatgtg 23516516
Query: 1089 cagcttcaatttttcatgatgagccc 1114
||| |||| |||| ||||||||||||
Sbjct: 23516515 caggttcagttttacatgatgagccc 23516490
Score = 58.0 bits (29), Expect = 5e-006
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 1250 gcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 23516158 gcagattccggtgcggccttacagacacaatgagtatgagagatt 23516114
Score = 52.0 bits (26), Expect = 3e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 450 attgcaacagagtgtggggttgattttgatgagg 483
||||| |||||||||||||||||||| |||||||
Sbjct: 23518186 attgccacagagtgtggggttgatttcgatgagg 23518153
Score = 52.0 bits (26), Expect = 3e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 662 ggttctgaaggttctatcagcctctccatcagcatattcagctaatccaa 711
|||| |||| ||||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 23517598 ggttttgaaagttctttcagcctctccatcagcttattctgctaacccaa 23517549
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 75.8 bits (38), Expect = 2e-011
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 1029 tctgttgagatctatgaatggtccggaacaagctggaagccgtatgttgctgatgatgtg 1088
||||| ||||| ||||| ||||| |||| |||||| |||||||||||||| | ||||||
Sbjct: 26635728 tctgtagagatatatgagtggtcaggaaagagctgggagccgtatgttgctaacgatgtg 26635669
Query: 1089 cagcttcaatttttcatgatgagccc 1114
||| |||| |||| ||||||||||||
Sbjct: 26635668 caggttcagttttacatgatgagccc 26635643
Score = 58.0 bits (29), Expect = 5e-006
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 1250 gcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 26635311 gcagattccggtgcggccttacagacacaatgagtatgagagatt 26635267
Score = 52.0 bits (26), Expect = 3e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 450 attgcaacagagtgtggggttgattttgatgagg 483
||||| |||||||||||||||||||| |||||||
Sbjct: 26637339 attgccacagagtgtggggttgatttcgatgagg 26637306
Score = 52.0 bits (26), Expect = 3e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 662 ggttctgaaggttctatcagcctctccatcagcatattcagctaatccaa 711
|||| |||| ||||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 26636751 ggttttgaaagttctttcagcctctccatcagcttattctgctaacccaa 26636702
>emb|BX832898.1|CNS0A0F3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL20ZC05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1468
Score = 65.9 bits (33), Expect = 2e-008
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 1014 gatgacctggaatactctgttgagatctatgaatggtccggaacaagctggaagccgtat 1073
||||||||||||| ||||| ||||| ||||| ||||| |||| || ||| ||||||||
Sbjct: 963 gatgacctggaattttctgtagagatatatgagtggtcaggaaagagatgggagccgtat 1022
Query: 1074 gttgctgatgatgtgcagcttcaattttt 1102
|||||| | ||||||||| |||| |||||
Sbjct: 1023 gttgctaacgatgtgcagtttcagttttt 1051
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 1199 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 1245
Score = 58.0 bits (29), Expect = 5e-006
Identities = 89/109 (81%)
Strand = Plus / Plus
Query: 450 attgcaacagagtgtggggttgattttgatgaggatccagaggcaatggttattgaccat 509
||||| |||||||||||||||||||| ||||||||| | || ||||||||||| |||
Sbjct: 398 attgccacagagtgtggggttgatttcgatgaggattcttcagctatggttattgatcat 457
Query: 510 atgaactatgccgtcacagatgttgaaggtgatcacaccttgattgctg 558
| | || ||||| | |||||||| || || ||||||||||||||||
Sbjct: 458 actagcttctccgtctctgatgttgacggcgaccacaccttgattgctg 506
Score = 46.1 bits (23), Expect = 0.021
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 913 taagcaaatgggttttccatgagaggggacatctaaaggctgttaat 959
||||||||||||| ||||| || ||||| ||||| ||||||| ||||
Sbjct: 862 taagcaaatgggtcttccacgaaaggggccatctgaaggctggtaat 908
Score = 44.1 bits (22), Expect = 0.082
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 678 tcagcctctccatcagcatattcagctaatccaa 711
||||||||||||||||| ||||| ||||| ||||
Sbjct: 626 tcagcctctccatcagcttattctgctaacccaa 659
>gb|AV783247.1|AV783247 AV783247 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-07-M20 3', mRNA
sequence
Length = 510
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 330 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 284
Score = 48.1 bits (24), Expect = 0.005
Identities = 69/84 (82%)
Strand = Plus / Minus
Query: 1068 ccgtatgttgctgatgatgtgcagcttcaatttttcatgatgagcccttacgttctgaaa 1127
|||||||||||| | | ||||||| |||| |||| |||||||||||| || || |||||
Sbjct: 510 ccgtatgttgctaacggtgtgcaggttcagttttacatgatgagcccgtatgtgttgaaa 451
Query: 1128 actatgtcgactgacaacaagggt 1151
|| |||| || ||||| ||||||
Sbjct: 450 accctgtcaacagacaagaagggt 427
>gb|AV791692.1|AV791692 AV791692 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-11-K08 3', mRNA
sequence
Length = 442
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 325 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 279
>gb|AV792945.1|AV792945 AV792945 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-17-G23 3', mRNA
sequence
Length = 439
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 329 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 283
>gb|AV797929.1|AV797929 AV797929 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-14-F12 3', mRNA
sequence
Length = 407
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 328 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 282
>gb|AV809092.1|AV809092 AV809092 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-58-B15 3', mRNA
sequence
Length = 440
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 331 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 285
>gb|AV813063.1|AV813063 AV813063 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-76-N15 3', mRNA
sequence
Length = 443
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 340 aagcagattccggtccggccttacagacacaatgagtatgagagatt 294
>gb|AV813637.1|AV813637 AV813637 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-79-F11 3', mRNA
sequence
Length = 405
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 330 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 284
>gb|AV440737.1|AV440737 AV440737 Arabidopsis thaliana above-ground organ two to six-week old
Arabidopsis thaliana cDNA clone APZ08b01_f 3', mRNA
sequence
Length = 256
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 241 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 195
>gb|AV538812.1|AV538812 AV538812 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ121f09F 3', mRNA sequence
Length = 553
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 395 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 349
>gb|BP563274.1|BP563274 BP563274 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-01-J12 3',
mRNA sequence
Length = 432
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 328 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 282
>gb|BP566046.1|BP566046 BP566046 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-52-E23 3',
mRNA sequence
Length = 437
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 328 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 282
>gb|BP570017.1|BP570017 BP570017 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-71-B22 3',
mRNA sequence
Length = 462
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 332 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 286
>gb|BP573855.1|BP573855 BP573855 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-85-N09 3',
mRNA sequence
Length = 400
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 329 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 283
>gb|BP579972.1|BP579972 BP579972 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-25-A10 3',
mRNA sequence
Length = 461
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 330 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 284
>gb|BP581925.1|BP581925 BP581925 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-33-P14 3',
mRNA sequence
Length = 450
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 328 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 282
>gb|BP585485.1|BP585485 BP585485 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-02-L08 3',
mRNA sequence
Length = 448
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 331 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 285
>gb|BP587696.1|BP587696 BP587696 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-43-I23 3',
mRNA sequence
Length = 417
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 328 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 282
>gb|BP588586.1|BP588586 BP588586 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-46-M15 3',
mRNA sequence
Length = 410
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 328 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 282
>gb|BP593465.1|BP593465 BP593465 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-22-D23 3',
mRNA sequence
Length = 438
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 330 aagcagattccggtccggccttacagacacaatgagtatgagagatt 284
>gb|BP596827.1|BP596827 BP596827 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-36-P07 3',
mRNA sequence
Length = 412
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 328 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 282
>gb|BP597175.1|BP597175 BP597175 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-38-E13 3',
mRNA sequence
Length = 415
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 385 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 339
>gb|BP609163.1|BP609163 BP609163 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-81-C18 3',
mRNA sequence
Length = 399
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 329 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 283
>gb|BP614087.1|BP614087 BP614087 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-95-I11 3',
mRNA sequence
Length = 423
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 328 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 282
>gb|BP617561.1|BP617561 BP617561 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-24-H08 3',
mRNA sequence
Length = 440
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 328 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 282
>gb|BP629190.1|BP629190 BP629190 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-15-F16 3',
mRNA sequence
Length = 364
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 329 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 283
>gb|BP631889.1|BP631889 BP631889 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-25-D12 3',
mRNA sequence
Length = 353
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 330 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 284
>gb|BP647297.1|BP647297 BP647297 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-75-A10 3',
mRNA sequence
Length = 409
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 332 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 286
>gb|BP778186.1|BP778186 BP778186 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-26-G21 3', mRNA
sequence
Length = 393
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 330 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 284
>gb|BP778208.1|BP778208 BP778208 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-26-I10 3', mRNA
sequence
Length = 398
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 343 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 297
>gb|BP783452.1|BP783452 BP783452 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-86-G07 3', mRNA
sequence
Length = 402
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 329 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 283
>gb|BP783581.1|BP783581 BP783581 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-87-D15 3', mRNA
sequence
Length = 414
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 330 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 284
>gb|BP787806.1|BP787806 BP787806 RAFL7 Arabidopsis thaliana cDNA clone RAFL26-05-M01 3', mRNA
sequence
Length = 384
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 329 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 283
>gb|BP790587.1|BP790587 BP790587 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-43-N08 3', mRNA
sequence
Length = 401
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 341 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 295
>gb|BP793887.1|BP793887 BP793887 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-58-B17 3', mRNA
sequence
Length = 422
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 329 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 283
>gb|BP794192.1|BP794192 BP794192 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-59-H03 3', mRNA
sequence
Length = 426
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1248 aagcagattccagtacgtccttacagacataatgagtatgagagatt 1294
||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 329 aagcagattccggtgcggccttacagacacaatgagtatgagagatt 283
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 721,781
Number of Sequences: 1013581
Number of extensions: 721781
Number of successful extensions: 54032
Number of sequences better than 0.5: 76
Number of HSP's better than 0.5 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53588
Number of HSP's gapped (non-prelim): 444
length of query: 1775
length of database: 908,940,872
effective HSP length: 21
effective length of query: 1754
effective length of database: 887,655,671
effective search space: 1556948046934
effective search space used: 1556948046934
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)