BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 5735869.2.1
         (539 letters)

Database: /db/trembl-ebi/tmp/swall 
           1,272,877 sequences; 406,886,216 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sptrnew|CAD41529|CAD41529 OSJNBb0020O11.3 protein.                     71   7e-18
sptr|Q9FDZ8|Q9FDZ8 F6N15.19 (Hypothetical 28.3 kDa protein).           51   1e-07
sptr|O81315|O81315 F6N15.19 protein.                                   47   1e-04
sptrnew|CAD97467|CAD97467 Keratin associated protein KAP10.10.         33   2.0  
sptr|Q84U23|Q84U23 LIPLESS2.                                           32   5.8  
sptr|Q86285|Q86285 ORF protein.                                        31   9.9  

>sptrnew|CAD41529|CAD41529 OSJNBb0020O11.3 protein.
          Length = 288

 Score = 70.9 bits (172), Expect(2) = 7e-18
 Identities = 30/40 (75%), Positives = 33/40 (82%)
 Frame = -1

Query: 500 GKGYXXXWDXERMATINDFIWTDSEISKMVRCFDSDGDDK 381
           GKGY   WD ERMAT++DFIWTDSEISKM+ CFDSD D K
Sbjct: 226 GKGYITPWDLERMATVHDFIWTDSEISKMIHCFDSDRDGK 265



 Score = 40.8 bits (94), Expect(2) = 7e-18
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = -2

Query: 385 INLEDFRSIVSQCNMLQEHEK*G 317
           INLEDFR+IVS+CNMLQE EK G
Sbjct: 266 INLEDFRTIVSRCNMLQEPEKSG 288


>sptr|Q9FDZ8|Q9FDZ8 F6N15.19 (Hypothetical 28.3 kDa protein).
          Length = 254

 Score = 51.2 bits (121), Expect(2) = 1e-07
 Identities = 20/40 (50%), Positives = 27/40 (67%)
 Frame = -1

Query: 500 GKGYXXXWDXERMATINDFIWTDSEISKMVRCFDSDGDDK 381
           GKG+    D  +MAT++DF WT+ E+  M+RCFD D D K
Sbjct: 196 GKGFITLRDVAKMATVHDFTWTEEELQDMIRCFDMDKDGK 235



 Score = 25.4 bits (54), Expect(2) = 1e-07
 Identities = 9/17 (52%), Positives = 15/17 (88%)
 Frame = -2

Query: 385 INLEDFRSIVSQCNMLQ 335
           ++L++FR IVS+C ML+
Sbjct: 236 LSLDEFRKIVSRCRMLK 252


>sptr|O81315|O81315 F6N15.19 protein.
          Length = 257

 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 19/40 (47%), Positives = 26/40 (65%)
 Frame = -1

Query: 500 GKGYXXXWDXERMATINDFIWTDSEISKMVRCFDSDGDDK 381
           GKG+    D  +MAT++DF WT+ E+  M+R FD D D K
Sbjct: 93  GKGFITRRDVAKMATVHDFTWTEEELQDMIRSFDMDKDGK 132


>sptrnew|CAD97467|CAD97467 Keratin associated protein KAP10.10.
          Length = 251

 Score = 33.1 bits (74), Expect = 2.0
 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
 Frame = +1

Query: 205 LCSMALCPLLSQQC*CNFTG*AMQN*STSICRPATLVILTSH--APATCCIEIQCCGNPR 378
           +C + +C   S  C C  +       + S CRP++ V L  H    +TCC+ +  CG   
Sbjct: 155 VCYVPVCSGASTSC-CQQSSCQPACCTASCCRPSSSVSLLCHPVCKSTCCVPVPSCGASA 213

Query: 379 GLSSPSLSKQRTILDI 426
               PS  +  + + +
Sbjct: 214 SSCQPSCCRTASCVSL 229


>sptr|Q84U23|Q84U23 LIPLESS2.
          Length = 505

 Score = 31.6 bits (70), Expect = 5.8
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 230 SGHRAIEHNLCSCSLSSPVDRGFYDSTD 147
           S H   +H+ C+CS SSPV R F+   D
Sbjct: 59  SVHSCCDHDTCTCSSSSPVTRQFFPVED 86


>sptr|Q86285|Q86285 ORF protein.
          Length = 436

 Score = 30.8 bits (68), Expect = 9.9
 Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 8/72 (11%)
 Frame = +3

Query: 123 LQSPSPKQVSRIIKSPINWT*QAATTKVMFNGS--------MSATIPTVLMQFHRLGHAK 278
           L   S K      + P NWT     + + FN S          AT+  +L Q  RLG   
Sbjct: 336 LSPVSKKSCRECYRIPRNWT-----SSIYFNNSGDGTIAKDSKATVLKILPQLARLGKLN 390

Query: 279 LEYKHLQTSNTR 314
           L    + T NTR
Sbjct: 391 LSTNEISTDNTR 402


  Database: /db/trembl-ebi/tmp/swall
    Posted date:  Sep 26, 2003  8:29 PM
  Number of letters in database: 406,886,216
  Number of sequences in database:  1,272,877
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 348,550,042
Number of Sequences: 1272877
Number of extensions: 6542037
Number of successful extensions: 15027
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15026
length of database: 406,886,216
effective HSP length: 115
effective length of database: 260,505,361
effective search space used: 16672343104
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)