BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 3562100.2.1 (759 letters) Database: /db/trembl-ebi/tmp/swall 1,165,242 sequences; 374,381,506 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sptr|Q8S1P4|Q8S1P4 P0677H08.7 protein. 201 8e-51 sptr|Q8LCZ6|Q8LCZ6 Hypothetical protein. 159 3e-38 sptr|Q9C8C1|Q9C8C1 Hypothetical 29.2 kDa protein. 159 3e-38 sptr|Q8VY49|Q8VY49 Hypothetical protein (Expressed protein). 150 2e-35 sptr|Q9SL69|Q9SL69 At2g20120 protein (Hypothetical protein) (Put... 149 5e-35 sptr|Q94EH1|Q94EH1 At2g20120/T2G17.8. 145 4e-34 sptr|Q9ZPX6|Q9ZPX6 At2g18460 protein. 135 5e-31 sptr|Q8GIR6|Q8GIR6 Hypothetical protein. 49 5e-05 sptr|Q98LX6|Q98LX6 Hypothetical protein mll0832. 43 0.004 sptr|Q8YW55|Q8YW55 Hypothetical protein All1761. 42 0.008 sptr|Q8Y271|Q8Y271 Probable transmembrane protein. 39 0.089 sptr|Q83BF1|Q83BF1 Hypothetical protein. 37 0.26 sptr|Q87EY4|Q87EY4 Conserved hypothetical protein. 36 0.58 sptr|Q9PGU9|Q9PGU9 Hypothetical protein Xf0199. 35 0.99 sptr|Q897S5|Q897S5 Putative transporter. 34 1.7 sptr|Q86B04|Q86B04 Similar to derepression of GCN4 expression; G... 34 2.2 sptr|Q869P4|Q869P4 Similar to derepression of GCN4 expression; G... 34 2.2 sptr|Q8PMN1|Q8PMN1 Hypothetical protein XAC1395. 33 4.9 sptr|Q8PAX9|Q8PAX9 Hypothetical protein XCC1347. 32 6.4 sw|Q96625|VCOM_ADEB2 Minor core protein (Protein V). 32 8.4
>sptr|Q8S1P4|Q8S1P4 P0677H08.7 protein. Length = 259 Score = 201 bits (511), Expect = 8e-51 Identities = 100/119 (84%), Positives = 105/119 (88%) Frame = +3 Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182 S V T D N AFKEVAII HPR+GEYAFGFITST+VLQTDKGDEELCSVYVPTNH Sbjct: 141 SKQVSTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNH 200 Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRT 359 LYIGDIFLVNS EIIRPNLSIREGIEIIVSGGMTMPQVI SLEPTPRKSQN+RL+R+ T Sbjct: 201 LYIGDIFLVNSEEIIRPNLSIREGIEIIVSGGMTMPQVIASLEPTPRKSQNIRLNRIMT 259 >sptr|Q8LCZ6|Q8LCZ6 Hypothetical protein. Length = 261 Score = 159 bits (403), Expect = 3e-38 Identities = 80/117 (68%), Positives = 92/117 (78%) Frame = +3 Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182 S + T D N AFKEVAII HPR+GEYAFGFITS++ LQTD G+EELCSVYVPTNH Sbjct: 140 SKQISTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNH 199 Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRV 353 LYIGD+FLV+S EIIRPNLSIREGIEIIVS GMTMPQVI ++ T ++ + RV Sbjct: 200 LYIGDVFLVSSEEIIRPNLSIREGIEIIVSVGMTMPQVISHVDRTANRTPHQHSLRV 256 >sptr|Q9C8C1|Q9C8C1 Hypothetical 29.2 kDa protein. Length = 261 Score = 159 bits (403), Expect = 3e-38 Identities = 80/117 (68%), Positives = 92/117 (78%) Frame = +3 Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182 S + T D N AFKEVAII HPR+GEYAFGFITS++ LQTD G+EELCSVYVPTNH Sbjct: 140 SKQISTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNH 199 Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRV 353 LYIGD+FLV+S EIIRPNLSIREGIEIIVS GMTMPQVI ++ T ++ + RV Sbjct: 200 LYIGDVFLVSSEEIIRPNLSIREGIEIIVSVGMTMPQVISHVDRTTNRTPHQHSLRV 256 >sptr|Q8VY49|Q8VY49 Hypothetical protein (Expressed protein). Length = 256 Score = 150 bits (378), Expect = 2e-35 Identities = 72/103 (69%), Positives = 84/103 (81%) Frame = +3 Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182 S + T D N AFKEVAII HPRVGEYAFGFITST+VLQ +EELC VYVPTNH Sbjct: 144 SKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNH 203 Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLE 311 LYIGDI LVNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +L+ Sbjct: 204 LYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILSTLD 246 >sptr|Q9SL69|Q9SL69 At2g20120 protein (Hypothetical protein) (Putative membrane protein COV). Length = 268 Score = 149 bits (375), Expect = 5e-35 Identities = 71/103 (68%), Positives = 84/103 (81%) Frame = +3 Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182 S + T D N AFKEVAII HPRVGEYAFGFITST+VLQ +EELC VYVPTNH Sbjct: 154 SKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNH 213 Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLE 311 LYIGDI LVNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +++ Sbjct: 214 LYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILSTVD 256 >sptr|Q94EH1|Q94EH1 At2g20120/T2G17.8. Length = 268 Score = 145 bits (367), Expect = 4e-34 Identities = 70/103 (67%), Positives = 83/103 (80%) Frame = +3 Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182 S + T D N AFKEVAII HPRVGEYAFGFITST+VLQ +EELC VYVPTN Sbjct: 154 SKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNR 213 Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLE 311 LYIGDI LVNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +++ Sbjct: 214 LYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILSTVD 256 >sptr|Q9ZPX6|Q9ZPX6 At2g18460 protein. Length = 129 Score = 135 bits (340), Expect = 5e-31 Identities = 61/88 (69%), Positives = 78/88 (88%) Frame = +3 Query: 48 AFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEII 227 AFKEVAII HP +GEYAFGFITST++L+ G EELC VYVPTNHLY+GDIFL++S +II Sbjct: 25 AFKEVAIIRHPHMGEYAFGFITSTVILRGRAGGEELCCVYVPTNHLYLGDIFLISSKDII 84 Query: 228 RPNLSIREGIEIIVSGGMTMPQVIMSLE 311 RPNLS+REGIEI++SGGM++P ++ +L+ Sbjct: 85 RPNLSVREGIEIVISGGMSIPHMLTTLD 112 >sptr|Q8GIR6|Q8GIR6 Hypothetical protein. Length = 268 Score = 49.3 bits (116), Expect = 5e-05 Identities = 25/88 (28%), Positives = 50/88 (56%), Gaps = 3/88 (3%) Frame = +3 Query: 39 NXXAFKEVAIISHPRVGEYAFGFITSTM--VLQTDKGDEELCSVYVP-TNHLYIGDIFLV 209 N F+ V ++ +PR G ++ GF+T + +Q + D L SV++P T + G +V Sbjct: 146 NGNRFRRVVLVEYPRKGLWSVGFVTGIVSDAIQAKRPDAALVSVFIPWTPNPTTGWYAVV 205 Query: 210 NSAEIIRPNLSIREGIEIIVSGGMTMPQ 293 E++ ++S+ + +I++SGG+ P+ Sbjct: 206 CEEEVLTLDMSVEDAFKILISGGIVSPK 233 >sptr|Q98LX6|Q98LX6 Hypothetical protein mll0832. Length = 250 Score = 43.1 bits (100), Expect = 0.004 Identities = 25/87 (28%), Positives = 52/87 (59%), Gaps = 5/87 (5%) Frame = +3 Query: 51 FKEVAIISHPRVGEYAFGFITSTMVLQ-TDKGDEE---LCSVYVP-TNHLYIGDIFLVNS 215 F++V ++ +PR G ++ F+ S + +K D+E L +V++P T + G + V Sbjct: 126 FRQVGLVEYPRKGVWSLVFVASEKETEINEKLDQEGDPLIAVFMPCTPNPTTGFLMYVLK 185 Query: 216 AEIIRPNLSIREGIEIIVSGGMTMPQV 296 ++I+ +++I +G ++IVS G+ P+V Sbjct: 186 SDIVLLDMTIEDGAKLIVSAGLVAPEV 212 >sptr|Q8YW55|Q8YW55 Hypothetical protein All1761. Length = 250 Score = 42.0 bits (97), Expect = 0.008 Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 2/82 (2%) Frame = +3 Query: 51 FKEVAIISHPRVGEYAFGFITSTMVLQ-TDKGDEELCSVYVPTN-HLYIGDIFLVNSAEI 224 F+ V +I +PR G +A F+T + + + + SV++PT + G +V E+ Sbjct: 144 FRRVILIEYPRRGIWAIAFVTGVISSEIQSQMPRPMLSVFIPTTPNPTTGWYAVVPEDEV 203 Query: 225 IRPNLSIREGIEIIVSGGMTMP 290 + ++S+ + +++VSGG+ P Sbjct: 204 VNLSMSVEDAFKVVVSGGIVAP 225 >sptr|Q8Y271|Q8Y271 Probable transmembrane protein. Length = 243 Score = 38.5 bits (88), Expect = 0.089 Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 3/102 (2%) Frame = +3 Query: 39 NXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKG-DEELCSVYVPTNHLYIGDIFL-VN 212 N AF++ ++ +PR G + F+T + E SVYVPT FL + Sbjct: 116 NGNAFRKALLVQYPREGSWTIAFLTGRPGGDVENHLQGEYVSVYVPTTPNPTSGFFLMMP 175 Query: 213 SAEIIRPNLSIREGIEIIVSGGMTMPQVI-MSLEPTPRKSQN 335 A+ I ++++ ++ IVS G+ P+ + ++P +S++ Sbjct: 176 KADTIELDMTVDAALKYIVSMGVVAPESLPRRMDPPSPESED 217 >sptr|Q83BF1|Q83BF1 Hypothetical protein. Length = 209 Score = 37.0 bits (84), Expect = 0.26 Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 1/82 (1%) Frame = +3 Query: 48 AFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTN-HLYIGDIFLVNSAEI 224 +F++V +I +PR G ++ F+TS Q +++ +V+VPT + G + + ++ Sbjct: 122 SFRKVVLIEYPRKGLWSIAFVTSNN-FQGLPFEDDALAVFVPTTPNPTSGFLMVTPKKDV 180 Query: 225 IRPNLSIREGIEIIVSGGMTMP 290 I ++I E +I+S G+ P Sbjct: 181 IDLPVTIEEAFRMIISLGVVTP 202 >sptr|Q87EY4|Q87EY4 Conserved hypothetical protein. Length = 235 Score = 35.8 bits (81), Expect = 0.58 Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Frame = +3 Query: 54 KEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTN-HLYIGDIFLVNSAEIIR 230 + V +I P A G +T ++ D G +EL +VYVPT + G + +V ++ Sbjct: 137 QRVVLIDFPHRDMKAVGLVTR-VIRDRDTG-QELAAVYVPTTPNPTSGYLEIVPVEQLTP 194 Query: 231 PNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRV 353 N S+ + + I+SGG P I T + + R+ Sbjct: 195 TNWSVDQAMSFIISGGAVSPDSIPFSRTTDQDEDGAKSPRL 235 >sptr|Q9PGU9|Q9PGU9 Hypothetical protein Xf0199. Length = 235 Score = 35.0 bits (79), Expect = 0.99 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 1/83 (1%) Frame = +3 Query: 54 KEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTN-HLYIGDIFLVNSAEIIR 230 + V +I P A G +T ++ D G +EL +VYVPT + G + +V ++ Sbjct: 137 QRVVLIDFPHRDMKAVGLVTR-VIRDRDTG-QELAAVYVPTTPNPTSGYLEIVPVEQLTP 194 Query: 231 PNLSIREGIEIIVSGGMTMPQVI 299 N S+ + + I+SGG P I Sbjct: 195 TNWSVDQAMSFIISGGAVSPDSI 217 >sptr|Q897S5|Q897S5 Putative transporter. Length = 193 Score = 34.3 bits (77), Expect = 1.7 Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 1/84 (1%) Frame = +3 Query: 48 AFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPT-NHLYIGDIFLVNSAEI 224 +FK+ ++ P + GF+TS ++ +K SV++PT + G + LV+ ++ Sbjct: 114 SFKQTVLVKFPNSETLSVGFVTSDKTIKENK-----ISVFIPTVPNPTTGFLVLVDKNDV 168 Query: 225 IRPNLSIREGIEIIVSGGMTMPQV 296 ++ E + I+S G++ P++ Sbjct: 169 EYLSMPFEEAFKFILSLGVSQPKM 192 >sptr|Q86B04|Q86B04 Similar to derepression of GCN4 expression; Gcn2p. Length = 2388 Score = 33.9 bits (76), Expect = 2.2 Identities = 29/72 (40%), Positives = 36/72 (50%) Frame = +3 Query: 177 NHLYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVR 356 NH Y LV A I RP LS EII+SGG ++I SL P P S N+ V Sbjct: 1940 NHQYYEG--LVFQAYIERPTLSNPSRTEIIMSGG-RYDKLIKSLHPNPSLSNNI----VS 1992 Query: 357 TV*LYEACMKVM 392 V + AC K++ Sbjct: 1993 GVGVTLACEKIV 2004 >sptr|Q869P4|Q869P4 Similar to derepression of GCN4 expression; Gcn2p. Length = 1261 Score = 33.9 bits (76), Expect = 2.2 Identities = 29/72 (40%), Positives = 36/72 (50%) Frame = +3 Query: 177 NHLYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVR 356 NH Y LV A I RP LS EII+SGG ++I SL P P S N+ V Sbjct: 813 NHQYYEG--LVFQAYIERPTLSNPSRTEIIMSGG-RYDKLIKSLHPNPSLSNNI----VS 865 Query: 357 TV*LYEACMKVM 392 V + AC K++ Sbjct: 866 GVGVTLACEKIV 877 >sptr|Q8PMN1|Q8PMN1 Hypothetical protein XAC1395. Length = 224 Score = 32.7 bits (73), Expect = 4.9 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 1/83 (1%) Frame = +3 Query: 54 KEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRP 233 + V +I P + G +T V++ EL +VYVPT + E++ P Sbjct: 136 QRVVLIDFPHRDMKSVGLVTR--VIKEQGTGRELAAVYVPTTPNPTSGYLEIVPVELLTP 193 Query: 234 -NLSIREGIEIIVSGGMTMPQVI 299 + S+ + + I+SGG P+ + Sbjct: 194 TDWSVDQAMSFIISGGAVAPESV 216 >sptr|Q8PAX9|Q8PAX9 Hypothetical protein XCC1347. Length = 223 Score = 32.3 bits (72), Expect = 6.4 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 1/83 (1%) Frame = +3 Query: 54 KEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRP 233 + V +I P + G +T V++ EL +VYVPT + E++ P Sbjct: 135 QRVVLIDFPHRDMKSVGLVTR--VIKEQGTGRELAAVYVPTTPNPTSGYLEIVPVELLTP 192 Query: 234 -NLSIREGIEIIVSGGMTMPQVI 299 + ++ + + I+SGG P+ + Sbjct: 193 TDWTVDQAMSFIISGGAVSPETV 215 >sw|Q96625|VCOM_ADEB2 Minor core protein (Protein V). Length = 361 Score = 32.0 bits (71), Expect = 8.4 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 8/71 (11%) Frame = -3 Query: 424 NP*PTSHPETP-ITFMHASYSHT-------VLTLSKRTFWLFRGVGSSDMITCGIVIPPE 269 NP P+ HP TP + +H S + VL KR F + DM+T +PP Sbjct: 143 NPTPSLHPVTPQMPIVHTSAAKRSAVPTVEVLAPKKRRFTESSDQLAVDMVTETSTVPPG 202 Query: 268 TIISMPSRIDK 236 T + +P+R K Sbjct: 203 TAVLLPARAVK 213 Database: /db/trembl-ebi/tmp/swall Posted date: Jul 11, 2003 8:27 PM Number of letters in database: 374,381,506 Number of sequences in database: 1,165,242 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 472,877,199 Number of Sequences: 1165242 Number of extensions: 9781262 Number of successful extensions: 21826 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 21409 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 21821 length of database: 374,381,506 effective HSP length: 119 effective length of database: 235,717,708 effective search space used: 31350455164 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
S1: 41 (21.7 bits)