BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 3106160.2.1 (788 letters) Database: /db/trembl-ebi/tmp/swall 1,165,242 sequences; 374,381,506 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sptr|Q8VXD5|Q8VXD5 SDL-1 protein. 194 1e-48 sptr|Q9C9Z9|Q9C9Z9 Hypothetical protein (Elongation defective 1). 193 2e-48 sptr|O80820|O80820 At2g41450 protein. 158 6e-38 sptr|Q9LGY7|Q9LGY7 EST AU091748(C11808) corresponds to a region ... 107 2e-22 sptr|Q9M2M7|Q9M2M7 Hypothetical 49.7 kDa protein. 99 8e-20 sptr|Q9LDM1|Q9LDM1 Hypothetical 66.8 kDa protein. 78 1e-13 sptrnew|CAA68196|CAA68196 AreA protein. 36 0.61 sw|O13412|AREA_ASPNG Nitrogen regulatory protein areA. 36 0.61 sptr|Q82S28|Q82S28 Hypothetical protein. 35 0.80 sptr|Q7ZXT4|Q7ZXT4 Similar to delta-like 1 (Drosophila). 33 4.0 sptr|P79941|P79941 Notch ligand X-delta-2. 33 4.0 sptr|Q8I0R8|Q8I0R8 Hypothetical protein F28C1.3b. 33 5.2 sptrnew|CAA99943|CAA99943 Hypothetical protein F28C1.3a. 33 5.2 sptr|Q19857|Q19857 Hypothetical protein F28C1.3a. 33 5.2 sptr|Q8XRX1|Q8XRX1 Probable transmembrane protein. 32 6.8 sptr|P91351|P91351 Hypothetical 50.5 kDa protein. 32 6.8 sptr|Q9VJU5|Q9VJU5 CG8942 protein (BG:DS00180.10 protein). 32 8.9 sptr|Q8MS81|Q8MS81 LP05465p. 32 8.9 sptrnew|AAH31433|AAH31433 Adaptor protein complex AP-2, alpha 1 ... 32 8.9 sw|P17426|A2A1_MOUSE Adapter-related protein complex 2 alpha 1 s... 32 8.9
>sptr|Q8VXD5|Q8VXD5 SDL-1 protein. Length = 529 Score = 194 bits (492), Expect = 1e-48 Identities = 101/178 (56%), Positives = 131/178 (73%), Gaps = 5/178 (2%) Frame = +3 Query: 3 AAVLHYTYTKFSDLTSRRDRCGCKPTKEDVKRCFMLDFDRAAFIIASTASEEEMLRWYNE 182 AAVLHYTY+KFSDLTSRRDRCGCKPTKEDVKRCFML+FDR+AFIIASTA+E+EML WY E Sbjct: 350 AAVLHYTYSKFSDLTSRRDRCGCKPTKEDVKRCFMLEFDRSAFIIASTATEDEMLNWYRE 409 Query: 183 RVVWTDKQLNLKLLRKGVLTRIYTPMTIVQSLRESGVFTSAIAAGQPAVN-----AKLSP 347 VVWTDK +NLKLLRKG+LTRIY PM IVQ LRESGVF+S +++ +++ A + Sbjct: 410 HVVWTDKAVNLKLLRKGILTRIYAPMVIVQGLRESGVFSSIVSSAHKSLSKDKFLASIES 469 Query: 348 KETNAQSQNVTAPGNMTRVVRSTDSKASGRKILQAVDLAFSDTNVTAVPPLSPPSLDE 521 ++ + + T P ++ R+ S+A+ R++L+ F + + AVPP PP + E Sbjct: 470 SNSSKAAASETLPSR--KIGRNQHSQAT-RRVLEESASHF-EFHEEAVPPRPPPGIYE 523 >sptr|Q9C9Z9|Q9C9Z9 Hypothetical protein (Elongation defective 1). Length = 533 Score = 193 bits (490), Expect = 2e-48 Identities = 98/182 (53%), Positives = 133/182 (73%), Gaps = 3/182 (1%) Frame = +3 Query: 3 AAVLHYTYTKFSDLTSRRDRCGCKPTKEDVKRCFMLDFDRAAFIIASTASEEEMLRWYNE 182 AAVLHYTY+KFSDLTSRRDRCGCKPTKEDVKRCFMLDFDR+AFIIASTA++EEML WY E Sbjct: 363 AAVLHYTYSKFSDLTSRRDRCGCKPTKEDVKRCFMLDFDRSAFIIASTATDEEMLSWYRE 422 Query: 183 RVVWTDKQLNLKLLRKGVLTRIYTPMTIVQSLRESGVFTSAIAAGQPAVNAKLSPKETNA 362 VVW DK + KLLRKG+LTRIY+PM ++Q+L+ESGVF+S +++ ++ K K ++ Sbjct: 423 HVVWGDKDVKTKLLRKGILTRIYSPMVVIQALKESGVFSSVVSSASTNLSKK---KFLSS 479 Query: 363 QSQNVTAPGNMTRVVRSTDSKASG---RKILQAVDLAFSDTNVTAVPPLSPPSLDEHRHH 533 ++ ++ + + S +SK+ G R +L+A +A+PPLSPP +++ R Sbjct: 480 IHKSNSSRSTASESLPSKESKSEGISARHLLEA---------ESAIPPLSPPGMEQARFF 530 Query: 534 SE 539 +E Sbjct: 531 TE 532 >sptr|O80820|O80820 At2g41450 protein. Length = 991 Score = 158 bits (400), Expect = 6e-38 Identities = 73/86 (84%), Positives = 80/86 (93%) Frame = +3 Query: 3 AAVLHYTYTKFSDLTSRRDRCGCKPTKEDVKRCFMLDFDRAAFIIASTASEEEMLRWYNE 182 AA+LHYTY+KFSDLTSRRDRCGCKPTK+DVKRCFMLDFDRAAFIIAST++ EEML+WY E Sbjct: 904 AAILHYTYSKFSDLTSRRDRCGCKPTKKDVKRCFMLDFDRAAFIIASTSTSEEMLQWYRE 963 Query: 183 RVVWTDKQLNLKLLRKGVLTRIYTPM 260 RVVWTD L LKLLRKG+LTRIY PM Sbjct: 964 RVVWTDDNLILKLLRKGILTRIYAPM 989 >sptr|Q9LGY7|Q9LGY7 EST AU091748(C11808) corresponds to a region of the predicted gene. Length = 556 Score = 107 bits (267), Expect = 2e-22 Identities = 68/183 (37%), Positives = 97/183 (53%), Gaps = 14/183 (7%) Frame = +3 Query: 3 AAVLHYTYTKFSDLTSRRDRCGCKPTKEDVKRCFMLDFDRAAFIIASTASEEEMLRWYNE 182 AA+LHYTYTKFSDLTSRRDRCGCKPTKEDVKRCF+L+FDR + + E Sbjct: 373 AAILHYTYTKFSDLTSRRDRCGCKPTKEDVKRCFILEFDRLVPGTCFMERQRYQFEAFEE 432 Query: 183 RVVWT-----DKQLNLKLLRKGVLTRIYTP---------MTIVQSLRESGVFTSAIAAGQ 320 V T K + +R ++ + I++ L+ESGVFT+A+ + + Sbjct: 433 GCVDTHICPNGKSQSRTSIRSTFISTMKAATHLLNDSSLQAIIRGLKESGVFTTAVTSAK 492 Query: 321 PAVNAKLSPKETNAQSQNVTAPGNMTRVVRSTDSKASGRKILQAVDLAFSDTNVTAVPPL 500 +AK T+ +++ P + + +A+ RKIL+ V D A+PP+ Sbjct: 493 --AHAKFKSSNTDLKNKESIHP----NITQGDHLQATVRKILEMV-----DAQEEAMPPM 541 Query: 501 SPP 509 SPP Sbjct: 542 SPP 544 >sptr|Q9M2M7|Q9M2M7 Hypothetical 49.7 kDa protein. Length = 439 Score = 98.6 bits (244), Expect = 8e-20 Identities = 63/172 (36%), Positives = 83/172 (48%) Frame = +3 Query: 3 AAVLHYTYTKFSDLTSRRDRCGCKPTKEDVKRCFMLDFDRAAFIIASTASEEEMLRWYNE 182 AAVLHYTY +FSDLTSRRDRCGCKPTK DVKRCFML+FDRA Sbjct: 319 AAVLHYTYPRFSDLTSRRDRCGCKPTKVDVKRCFMLEFDRA------------------- 359 Query: 183 RVVWTDKQLNLKLLRKGVLTRIYTPMTIVQSLRESGVFTSAIAAGQPAVNAKLSPKETNA 362 I+Q LRE+GVF+S + A A SP Sbjct: 360 --------------------------VIIQELREAGVFSSVVIA------AHKSP----- 382 Query: 363 QSQNVTAPGNMTRVVRSTDSKASGRKILQAVDLAFSDTNVTAVPPLSPPSLD 518 S+N + + + + R + + R++L+ ++ +AVPP SPP L+ Sbjct: 383 -SKNSSTADSTSGITRESSQETGKRRVLEFHLDVDGESQASAVPPQSPPGLE 433 >sptr|Q9LDM1|Q9LDM1 Hypothetical 66.8 kDa protein. Length = 592 Score = 77.8 bits (190), Expect = 1e-13 Identities = 34/41 (82%), Positives = 38/41 (92%) Frame = +3 Query: 3 AAVLHYTYTKFSDLTSRRDRCGCKPTKEDVKRCFMLDFDRA 125 AA+LHYTY+KFSDLT+RRDRC CKP +EDVK CFMLDFDRA Sbjct: 312 AAILHYTYSKFSDLTARRDRCCCKPKEEDVKICFMLDFDRA 352 >sptrnew|CAA68196|CAA68196 AreA protein. Length = 882 Score = 35.8 bits (81), Expect = 0.61 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%) Frame = +3 Query: 306 IAAGQPAVNAKLS-PKETNAQSQNVTAPGNMTRVVRSTDSKASGRKILQAVDLAFSDTNV 482 IAA P N S P ++ S AP R+ ++TD++A G + ++ + + V Sbjct: 787 IAAAPPKANPTTSSPGQSRGTSSVQMAPKRQRRLEKATDAEAGGDEASKSSTASGGRSKV 846 Query: 483 TAVPPLSPPSLDEHRHHS 536 A+ P PP+ +HS Sbjct: 847 VALAPAMPPAAANPANHS 864 >sw|O13412|AREA_ASPNG Nitrogen regulatory protein areA. Length = 882 Score = 35.8 bits (81), Expect = 0.61 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%) Frame = +3 Query: 306 IAAGQPAVNAKLS-PKETNAQSQNVTAPGNMTRVVRSTDSKASGRKILQAVDLAFSDTNV 482 IAA P N S P ++ S AP R+ ++TD++A G + ++ + + V Sbjct: 787 IAAAPPKANPTTSSPGQSRGTSSVQMAPKRQRRLEKATDAEAGGDEASKSSTASGGRSKV 846 Query: 483 TAVPPLSPPSLDEHRHHS 536 A+ P PP+ +HS Sbjct: 847 VALAPAMPPAAANPANHS 864 >sptr|Q82S28|Q82S28 Hypothetical protein. Length = 392 Score = 35.4 bits (80), Expect = 0.80 Identities = 32/132 (24%), Positives = 55/132 (41%) Frame = +3 Query: 138 ASTASEEEMLRWYNERVVWTDKQLNLKLLRKGVLTRIYTPMTIVQSLRESGVFTSAIAAG 317 AS +E++R + + + +L++L K R + SL +S + I Sbjct: 203 ASELVPQEVIRAVSSHITYEPANGHLEVLSKDTDGREALARIVADSLLQSPITGEKIPLK 262 Query: 318 QPAVNAKLSPKETNAQSQNVTAPGNMTRVVRSTDSKASGRKILQAVDLAFSDTNVTAVPP 497 Q + +P+ + S+ VT+ +VV S A+GR +L +D TA Sbjct: 263 QYDYQSLAAPRNFDIASEPVTS----VKVVELGYSAANGRSLLVKTWTKDADDIYTAARS 318 Query: 498 LSPPSLDEHRHH 533 L P+ D HH Sbjct: 319 LINPTFDFRDHH 330 >sptr|Q7ZXT4|Q7ZXT4 Similar to delta-like 1 (Drosophila). Length = 642 Score = 33.1 bits (74), Expect = 4.0 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 5/62 (8%) Frame = +2 Query: 206 AELKASEERSADSHIHPNDNCSESARIRCLHFRHCSWPTCCE-----CQTLTQGNQCAEP 370 +EL+ S S D H + D+CS+ R R +F H TC E C + +G CAEP Sbjct: 149 SELRYSYHVSCDEHYY-GDSCSDYCRPRDDNFGHY---TCDEQGNRLCMSGWKGEYCAEP 204 Query: 371 KC 376 C Sbjct: 205 IC 206 >sptr|P79941|P79941 Notch ligand X-delta-2. Length = 642 Score = 33.1 bits (74), Expect = 4.0 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 5/62 (8%) Frame = +2 Query: 206 AELKASEERSADSHIHPNDNCSESARIRCLHFRHCSWPTCCE-----CQTLTQGNQCAEP 370 +EL+ S S D H + D+CS+ R R +F H TC E C + +G CAEP Sbjct: 149 SELRYSYHVSCDEHYY-GDSCSDYCRPRDDNFGHY---TCDEQGNRLCMSGWKGEYCAEP 204 Query: 371 KC 376 C Sbjct: 205 IC 206 >sptr|Q8I0R8|Q8I0R8 Hypothetical protein F28C1.3b. Length = 939 Score = 32.7 bits (73), Expect = 5.2 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Frame = -2 Query: 229 FLRSFKFSCL-SVHTTRSLYQRSISSSLAVDAIIKAALSKSNMKHLLTSSF 80 F+RS +C +VH + S+ ++DA I AA S S M++LLT S+ Sbjct: 590 FVRSSSLTCTETVHDIHDRLREMSGSTHSLDAAIAAAASNSTMQNLLTVSY 640 >sptrnew|CAA99943|CAA99943 Hypothetical protein F28C1.3a. Length = 944 Score = 32.7 bits (73), Expect = 5.2 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Frame = -2 Query: 229 FLRSFKFSCL-SVHTTRSLYQRSISSSLAVDAIIKAALSKSNMKHLLTSSF 80 F+RS +C +VH + S+ ++DA I AA S S M++LLT S+ Sbjct: 595 FVRSSSLTCTETVHDIHDRLREMSGSTHSLDAAIAAAASNSTMQNLLTVSY 645 >sptr|Q19857|Q19857 Hypothetical protein F28C1.3a. Length = 944 Score = 32.7 bits (73), Expect = 5.2 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Frame = -2 Query: 229 FLRSFKFSCL-SVHTTRSLYQRSISSSLAVDAIIKAALSKSNMKHLLTSSF 80 F+RS +C +VH + S+ ++DA I AA S S M++LLT S+ Sbjct: 595 FVRSSSLTCTETVHDIHDRLREMSGSTHSLDAAIAAAASNSTMQNLLTVSY 645 >sptr|Q8XRX1|Q8XRX1 Probable transmembrane protein. Length = 303 Score = 32.3 bits (72), Expect = 6.8 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = -2 Query: 490 TAVTLVSLKARSTACSIFLPDA-FESVDLTTLVMFPGAVTFWLCALVSLGESLAFTAGWP 314 T++T+V+ + S C + L A ++ +++ + GAVT + A G + A WP Sbjct: 17 TSITMVAFASNSLLCRLALQHASIDAASFSSIRLVSGAVTLAVIARAGSGGTPPARADWP 76 Query: 313 AA 308 AA Sbjct: 77 AA 78 >sptr|P91351|P91351 Hypothetical 50.5 kDa protein. Length = 443 Score = 32.3 bits (72), Expect = 6.8 Identities = 21/68 (30%), Positives = 30/68 (44%) Frame = -1 Query: 428 CL*ISRSDHSCHVPRCGNILALRIGFLG*EFGIHSRLASCNGGSEDTGFAQTLNNCHWGV 249 CL ISRSD C+ RC ++G + R+ NGG + G +T + W + Sbjct: 177 CL-ISRSDRPCYKNRC---------YIGYTVDPNRRIMQHNGGRDKGGAKKTDSRGPWDM 226 Query: 248 YASQHSFP 225 H FP Sbjct: 227 VCVVHGFP 234 >sptr|Q9VJU5|Q9VJU5 CG8942 protein (BG:DS00180.10 protein). Length = 620 Score = 32.0 bits (71), Expect = 8.9 Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 2/80 (2%) Frame = +2 Query: 254 PNDNCSESARIRCLHFRHCSWPTCCECQTLTQ--GNQCAEPKCYRTWEHDKSGQIY*FKG 427 P+DNC C H CS P CEC+ + GN P Y+ ++ +G Sbjct: 155 PSDNCLPVCEKECGHHSFCSEPGKCECEPGYEKVGNGTVFPDGYK---NNSNGNC---SP 208 Query: 428 IRQKDTASR*SCLQRY*CNC 487 I KD C++ C C Sbjct: 209 ICPKDCGQNSRCVRPGVCEC 228 >sptr|Q8MS81|Q8MS81 LP05465p. Length = 507 Score = 32.0 bits (71), Expect = 8.9 Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 2/80 (2%) Frame = +2 Query: 254 PNDNCSESARIRCLHFRHCSWPTCCECQTLTQ--GNQCAEPKCYRTWEHDKSGQIY*FKG 427 P+DNC C H CS P CEC+ + GN P Y+ ++ +G Sbjct: 155 PSDNCLPVCEKECGHHSFCSEPGKCECEPGYEKVGNGTVFPDGYK---NNSNGNC---SP 208 Query: 428 IRQKDTASR*SCLQRY*CNC 487 I KD C++ C C Sbjct: 209 ICPKDCGQNSRCVRPGVCEC 228 >sptrnew|AAH31433|AAH31433 Adaptor protein complex AP-2, alpha 1 subunit. Length = 977 Score = 32.0 bits (71), Expect = 8.9 Identities = 20/65 (30%), Positives = 32/65 (49%) Frame = +3 Query: 63 CGCKPTKEDVKRCFMLDFDRAAFIIASTASEEEMLRWYNERVVWTDKQLNLKLLRKGVLT 242 C CK +D K C L R + I++S +++ + +Y W L++KLLR L Sbjct: 213 CLCKKNPDDFKTCISLAVSRLSRIVSSASTDLQDYTYYFVPAPW----LSVKLLR---LL 265 Query: 243 RIYTP 257 + Y P Sbjct: 266 QCYPP 270 >sw|P17426|A2A1_MOUSE Adapter-related protein complex 2 alpha 1 subunit (Alpha-adaptin A) (Adaptor protein complex AP-2 alpha-1 subunit) (Clathrin assembly protein complex 2 alpha-A large chain) (100 kDa coated vesicle protein A) (Plasma membrane adaptor HA2/AP2 adaptin alpha A subunit). Length = 977 Score = 32.0 bits (71), Expect = 8.9 Identities = 20/65 (30%), Positives = 32/65 (49%) Frame = +3 Query: 63 CGCKPTKEDVKRCFMLDFDRAAFIIASTASEEEMLRWYNERVVWTDKQLNLKLLRKGVLT 242 C CK +D K C L R + I++S +++ + +Y W L++KLLR L Sbjct: 213 CLCKKNPDDFKTCISLAVSRLSRIVSSASTDLQDYTYYFVPAPW----LSVKLLR---LL 265 Query: 243 RIYTP 257 + Y P Sbjct: 266 QCYPP 270 Database: /db/trembl-ebi/tmp/swall Posted date: Jul 11, 2003 8:27 PM Number of letters in database: 374,381,506 Number of sequences in database: 1,165,242 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 492,806,498 Number of Sequences: 1165242 Number of extensions: 9511614 Number of successful extensions: 25929 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 24908 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 25903 length of database: 374,381,506 effective HSP length: 120 effective length of database: 234,552,466 effective search space used: 33306450172 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
S1: 41 (21.7 bits)