BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2950292.2.1
(1205 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptr|Q9SKL4|Q9SKL4 Expressed protein (At2g15240/F15A23.2). 386 e-106
sptr|Q8LFF1|Q8LFF1 Hypothetical protein. 384 e-105
sptr|O55227|O55227 Unc-50 related protein (UNC50). 182 6e-45
sptr|Q9Y4S6|Q9Y4S6 Hypothetical protein (UNC50). 182 6e-45
sptr|Q7ZUU1|Q7ZUU1 Similar to RIKEN cDNA 1110002A21 gene. 182 8e-45
sptr|Q9UQF4|Q9UQF4 Unc-50 related protein homolog (Hypothetical ... 182 1e-44
sptr|Q9CQ61|Q9CQ61 1110002A21Rik protein (RIKEN cDNA 1110002A21 ... 181 1e-44
sptr|Q9VHN5|Q9VHN5 CG9773 protein (RE19904p). 173 4e-42
sptr|P87155|P87155 Hypothetical protein, yeast homolog YKR030W i... 168 1e-40
sw|Q10045|YRT2_CAEEL Hypothetical 28.6 kDa protein T07A5.2 in ch... 168 2e-40
sptrnew|EAA08030|EAA08030 ENSANGP00000018672 (Fragment). 153 5e-36
sw|P36125|YK10_YEAST Hypothetical 32.0 kDa protein in SAP190-SPO... 136 5e-31
sptr|Q8PXV0|Q8PXV0 Hypothetical protein MM1116. 35 2.2
sptr|Q8EQG3|Q8EQG3 Hypothetical conserved protein. 34 3.7
sptr|Q23340|Q23340 ZC455.8 protein. 34 3.7
sw|P34855|NU5M_APILI NADH-ubiquinone oxidoreductase chain 5 (EC ... 34 3.7
sptr|Q85JB6|Q85JB6 Cytochrome c oxidase subunit 1 (EC 1.9.3.1). 34 4.8
sptr|Q87H28|Q87H28 Cytochrome BD2, subunit I. 33 6.3
sptr|Q36108|Q36108 NADH dehydrogenase. 33 8.2
sptr|Q8VQE3|Q8VQE3 Histidine kinase sensor protein (Fragment). 33 8.2
sptr|Q9P6R5|Q9P6R5 Hypothetical transmembrane protein. 33 8.2
>sptr|Q9SKL4|Q9SKL4 Expressed protein (At2g15240/F15A23.2).
Length = 252
Score = 386 bits (991), Expect = e-106
Identities = 177/228 (77%), Positives = 198/228 (86%), Gaps = 1/228 (0%)
Frame = +2
Query: 152 FFFYLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILIL 331
F Y RRIVKWQQ D+EYTFWQM++LCTSPKVVYQHTKYHKQTKNQWARDDPAF+VI L
Sbjct: 21 FLQYFRRIVKWQQMDVEYTFWQMLNLCTSPKVVYQHTKYHKQTKNQWARDDPAFIVICSL 80
Query: 332 FLVFATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREE-PNSHV 508
LV AT AYC Y S+SHA + + SV+F HFL G V+AT CWFLTNSYLREE PNSHV
Sbjct: 81 LLVVATVAYCVTYDHSSSHAVVVVVSVLFTHFLITGAVIATCCWFLTNSYLREETPNSHV 140
Query: 509 VEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVVAISYYHY 688
VEQRVEWLY FDVHCNSFFP FV+LYVV YFLSPLL+AHGF P LLSNLLF+V SYYHY
Sbjct: 141 VEQRVEWLYTFDVHCNSFFPMFVLLYVVHYFLSPLLIAHGFIPLLLSNLLFMVGASYYHY 200
Query: 689 LNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLYF 832
LNFLGYDVLPFL+RTTFFLYPIG+VI+LSP++IL GFNP+RYF+++YF
Sbjct: 201 LNFLGYDVLPFLERTTFFLYPIGVVIVLSPILILSGFNPSRYFMNMYF 248
>sptr|Q8LFF1|Q8LFF1 Hypothetical protein.
Length = 252
Score = 384 bits (985), Expect = e-105
Identities = 176/228 (77%), Positives = 197/228 (86%), Gaps = 1/228 (0%)
Frame = +2
Query: 152 FFFYLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILIL 331
F Y RRIVKWQQ D+EYTFWQM++LCTSPKVVYQHTKYHKQTKNQWARDDPAF+VI L
Sbjct: 21 FLQYFRRIVKWQQMDVEYTFWQMLNLCTSPKVVYQHTKYHKQTKNQWARDDPAFIVICSL 80
Query: 332 FLVFATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREE-PNSHV 508
LV AT AYC Y S+SHA + + SV+ HFL G V+AT CWFLTNSYLREE PNSHV
Sbjct: 81 LLVVATVAYCVTYDHSSSHAVVVVVSVLLTHFLITGAVIATCCWFLTNSYLREETPNSHV 140
Query: 509 VEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVVAISYYHY 688
VEQRVEWLY FDVHCNSFFP FV+LYVV YFLSPLL+AHGF P LLSNLLF+V SYYHY
Sbjct: 141 VEQRVEWLYTFDVHCNSFFPMFVLLYVVHYFLSPLLIAHGFIPLLLSNLLFMVGASYYHY 200
Query: 689 LNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLYF 832
LNFLGYDVLPFL+RTTFFLYPIG+VI+LSP++IL GFNP+RYF+++YF
Sbjct: 201 LNFLGYDVLPFLERTTFFLYPIGVVIVLSPILILSGFNPSRYFMNMYF 248
>sptr|O55227|O55227 Unc-50 related protein (UNC50).
Length = 259
Score = 182 bits (463), Expect = 6e-45
Identities = 90/224 (40%), Positives = 140/224 (62%), Gaps = 1/224 (0%)
Frame = +2
Query: 161 YLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
YLRR+ +++Q D E+ WQM++L TSP+ VY++ Y KQTK+QWARDDPAF+V+L ++L
Sbjct: 34 YLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFLVLLSIWLC 93
Query: 341 FATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREEPNSHVVEQR 520
+T + + VVF+ + G++++TL WF++N YL + + +
Sbjct: 94 VSTIGFGFVLDMGFFETIKLLLWVVFIDCVGVGLLISTLMWFISNKYLVKRQSR---DYD 150
Query: 521 VEWLYAFDVHCNSFFPAFVILYVVQ-YFLSPLLVAHGFFPALLSNLLFVVAISYYHYLNF 697
VEW YAFDVH N+F+P VIL+ +Q +F++ +++ F L+ N L+++A+ YY Y+ F
Sbjct: 151 VEWGYAFDVHLNAFYPLLVILHFIQLFFINHVILTDTFIGYLVGNTLWLIAVGYYIYVTF 210
Query: 698 LGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLY 829
LGY LPFL T LYP +I+L L + +G+N T S Y
Sbjct: 211 LGYSALPFLKNTVVLLYPFAPLIVLYGLSLALGWNFTHTLCSFY 254
>sptr|Q9Y4S6|Q9Y4S6 Hypothetical protein (UNC50).
Length = 259
Score = 182 bits (463), Expect = 6e-45
Identities = 91/224 (40%), Positives = 140/224 (62%), Gaps = 1/224 (0%)
Frame = +2
Query: 161 YLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
YLRR+ +++Q D E+ WQM++L TSP+ VY++ Y KQTK+QWARDDPAF+V+L ++L
Sbjct: 34 YLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFLVLLSIWLC 93
Query: 341 FATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREEPNSHVVEQR 520
+T + + VV + + G+++ATL WF++N YL + + +
Sbjct: 94 VSTIGFGFVLDMGFFETIKLLLWVVLIDCVGVGLLIATLMWFISNKYLVKRQSR---DYD 150
Query: 521 VEWLYAFDVHCNSFFPAFVILYVVQ-YFLSPLLVAHGFFPALLSNLLFVVAISYYHYLNF 697
VEW YAFDVH N+F+P VIL+++Q +F++ +++ F L+ N L++VA+ YY Y+ F
Sbjct: 151 VEWGYAFDVHLNAFYPLLVILHLIQLFFINHVILTDTFIGYLVGNTLWLVAVGYYIYVTF 210
Query: 698 LGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLY 829
LGY LPFL T LYP +I+L L + +G+N T S Y
Sbjct: 211 LGYSALPFLKNTVILLYPFAPLILLYGLSLALGWNFTHTLCSFY 254
>sptr|Q7ZUU1|Q7ZUU1 Similar to RIKEN cDNA 1110002A21 gene.
Length = 259
Score = 182 bits (462), Expect = 8e-45
Identities = 92/220 (41%), Positives = 140/220 (63%), Gaps = 3/220 (1%)
Frame = +2
Query: 161 YLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
YLRR++ ++Q D E+ WQM++L TSP+ VY++ Y KQTK+QWARDDPAF+V+L ++L
Sbjct: 32 YLRRLLHFRQMDFEFAVWQMLYLFTSPQKVYRNFHYRKQTKDQWARDDPAFLVLLSIWLC 91
Query: 341 FATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREEPNSHVVEQR 520
+T + + VVF+ + G++++TL WF+TN YL + PN +
Sbjct: 92 VSTVGFGLVLDMGFVETLTLLLWVVFIDCIGVGLLISTLMWFVTNKYLMKHPNR---DYD 148
Query: 521 VEWLYAFDVHCNSFFPAFVILYVVQ-YFLSPLLV--AHGFFPALLSNLLFVVAISYYHYL 691
VEW YAFDVH N+F+P VIL+ +Q +F++ ++V + F + N ++++AI YY Y+
Sbjct: 149 VEWGYAFDVHLNAFYPLLVILHFLQLFFINHVVVISSDWFLGYFVGNTMWLIAIGYYVYI 208
Query: 692 NFLGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTR 811
FLGY LPFL T LYP L+ +L L I +G+N T+
Sbjct: 209 TFLGYSALPFLKNTVVLLYPFALLGLLYVLSISLGWNFTK 248
>sptr|Q9UQF4|Q9UQF4 Unc-50 related protein homolog (Hypothetical
protein).
Length = 259
Score = 182 bits (461), Expect = 1e-44
Identities = 91/224 (40%), Positives = 139/224 (62%), Gaps = 1/224 (0%)
Frame = +2
Query: 161 YLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
YLRR+ +++Q D E+ WQM++L TSP+ VY++ Y KQTK+QWARDDPAF+V+L ++L
Sbjct: 34 YLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFLVLLSIWLC 93
Query: 341 FATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREEPNSHVVEQR 520
+T + + VV + + G+++ATL WF++N YL + + +
Sbjct: 94 VSTIGFGFVLDMGFFETIKLLLWVVLIDCVGVGLLIATLMWFISNKYLVKRQSR---DYD 150
Query: 521 VEWLYAFDVHCNSFFPAFVILYVVQ-YFLSPLLVAHGFFPALLSNLLFVVAISYYHYLNF 697
VEW YAFDVH N+F+P VIL+ +Q +F++ +++ F L+ N L++VA+ YY Y+ F
Sbjct: 151 VEWGYAFDVHLNAFYPLLVILHFIQLFFINHVILTDTFIGYLVGNTLWLVAVGYYIYVTF 210
Query: 698 LGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLY 829
LGY LPFL T LYP +I+L L + +G+N T S Y
Sbjct: 211 LGYSALPFLKNTVILLYPFAPLILLYGLSLALGWNFTHTLCSFY 254
>sptr|Q9CQ61|Q9CQ61 1110002A21Rik protein (RIKEN cDNA 1110002A21
gene) (UNC50).
Length = 259
Score = 181 bits (460), Expect = 1e-44
Identities = 89/224 (39%), Positives = 140/224 (62%), Gaps = 1/224 (0%)
Frame = +2
Query: 161 YLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
YLRR+ +++Q D E+ WQM++L TSP+ VY++ Y KQTK+QWARDDPAF+V+L ++L
Sbjct: 34 YLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFLVLLSIWLC 93
Query: 341 FATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREEPNSHVVEQR 520
+T + + VVF+ + G++++TL WF++N YL + + +
Sbjct: 94 VSTIGFGFVLDMGFFETIKLLLWVVFIDCVGVGLLISTLMWFVSNKYLVKRQSR---DYD 150
Query: 521 VEWLYAFDVHCNSFFPAFVILYVVQ-YFLSPLLVAHGFFPALLSNLLFVVAISYYHYLNF 697
VEW YAFDVH N+F+P VIL+ +Q +F++ +++ F L+ N L+++A+ YY Y+ F
Sbjct: 151 VEWGYAFDVHLNAFYPLLVILHFIQLFFINHVILTDTFIGYLVGNTLWLIAVGYYIYVTF 210
Query: 698 LGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLY 829
LGY LPFL T LYP +++L L + +G+N T S Y
Sbjct: 211 LGYSALPFLKNTVILLYPFAPLMVLYGLSLALGWNFTHTLCSFY 254
>sptr|Q9VHN5|Q9VHN5 CG9773 protein (RE19904p).
Length = 275
Score = 173 bits (439), Expect = 4e-42
Identities = 85/224 (37%), Positives = 139/224 (62%), Gaps = 1/224 (0%)
Frame = +2
Query: 161 YLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
YLRR++K+ Q D E+ WQM++L +P+ VY++ Y KQTK+Q+ARDDPAF+V+L++ L
Sbjct: 51 YLRRLLKFNQMDFEFALWQMLYLFVAPQKVYRNFNYRKQTKSQFARDDPAFLVLLVVCLC 110
Query: 341 FATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREEPNSHVVEQR 520
+ + G S + I VVF+ +F GI++A+ W +TN YLR ++ +E
Sbjct: 111 VTSLGFAYVLGLSFWQSISFIFYVVFVDCIFVGIIIASFFWAVTNRYLR----TNSLEPD 166
Query: 521 VEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFF-PALLSNLLFVVAISYYHYLNF 697
+EW YAFDVH N+FFP ++L+ +Q F L++ +F L N +++ + YY Y+ F
Sbjct: 167 IEWGYAFDVHLNAFFPPLMLLHFIQLFFYNWLISQTWFISRFLGNTFWLMGMGYYVYITF 226
Query: 698 LGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLY 829
LGY+ +P L T L + ++ +L ++ +IG+N T F++ Y
Sbjct: 227 LGYNCIPHLKNTRIILIALPIIFLLFLVVTIIGWNATISFVNFY 270
>sptr|P87155|P87155 Hypothetical protein, yeast homolog YKR030W is
possibly involved in vesicular transport and membrane
fusion by 2-hybrid data.
Length = 235
Score = 168 bits (426), Expect = 1e-40
Identities = 81/224 (36%), Positives = 133/224 (59%), Gaps = 2/224 (0%)
Frame = +2
Query: 170 RIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLVFAT 349
R++K Q D E +W M +L +P+ VY+ KQ N++ R+D +F+V+ +V +
Sbjct: 10 RLLKLSQMDFERAWWDMANLFRAPRRVYRSITLRKQNINRYGREDFSFIVLFSCMIVISA 69
Query: 350 SAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREEPNSHV--VEQRV 523
+ Y + TIT ++F+ F G+++AT+ +F+ +L + ++ + + ++
Sbjct: 70 LLWALFYMNTPKGYVTTITFMLFVDFGAVGVIMATMYYFIAKRFLMKSNDTILSSTDYQL 129
Query: 524 EWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVVAISYYHYLNFLG 703
EW Y FDVHCNSFFP+FV+LYV+Q FL P++ F + N L++VA+ YY YL F+G
Sbjct: 130 EWNYCFDVHCNSFFPSFVLLYVIQLFLLPVITRDNFISLFMGNTLYLVALCYYSYLTFIG 189
Query: 704 YDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLYFG 835
Y +LPFL T L PI + I+ L L+GFN ++ + +YFG
Sbjct: 190 YQILPFLKNTHALLLPIPMFFIMWALS-LLGFNVPKHVVDVYFG 232
>sw|Q10045|YRT2_CAEEL Hypothetical 28.6 kDa protein T07A5.2 in
chromosome III.
Length = 244
Score = 168 bits (425), Expect = 2e-40
Identities = 88/224 (39%), Positives = 133/224 (59%), Gaps = 1/224 (0%)
Frame = +2
Query: 161 YLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
+ RR+V +Q D E+ WQM++L P VY++ Y K+TK+Q+ARDDPAF+V+L L L+
Sbjct: 10 FTRRLVHIRQMDFEFALWQMLYLLIQPSKVYKNFIYRKRTKDQFARDDPAFLVLLALSLL 69
Query: 341 FATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREEPNSHVVEQR 520
F++ Y A G VF+ + G+V+AT+ W+++N +LR+ V +Q
Sbjct: 70 FSSIFYAYALGLEKIGFFTFFLWSVFVDCIGVGVVIATVLWWVSNRFLRK-----VRDQD 124
Query: 521 VEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLV-AHGFFPALLSNLLFVVAISYYHYLNF 697
VEW Y FDVH N+FFP ++L+V+ L P L+ + F LL N + +A YY Y+ F
Sbjct: 125 VEWGYCFDVHLNAFFPMLILLHVIVPILYPTLIDSPAFLSILLGNTFWFLAACYYVYITF 184
Query: 698 LGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLY 829
LGY LP L +T +FLYPI + + + G+N +R L+ Y
Sbjct: 185 LGYTALPILHKTQYFLYPISFIFMFFVATLTGGWNISRTALNFY 228
>sptrnew|EAA08030|EAA08030 ENSANGP00000018672 (Fragment).
Length = 263
Score = 153 bits (386), Expect = 5e-36
Identities = 74/184 (40%), Positives = 112/184 (60%), Gaps = 1/184 (0%)
Frame = +2
Query: 161 YLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
YLRR +K+ Q D EY WQMV+L +PK VY++ Y KQTK+Q+ARDDPAF+V+L+ L
Sbjct: 77 YLRRFIKFDQMDFEYAMWQMVYLFIAPKKVYRNFNYRKQTKSQFARDDPAFLVLLVGCLC 136
Query: 341 FATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREEPNSHVVEQR 520
+ + L VVF+ +F G+++ATL W + N Y R+ + +
Sbjct: 137 VTSIGFAWVLSLGFLQTILFTLYVVFVDCIFCGMIVATLLWVIANRYFRDRNS----DFD 192
Query: 521 VEWLYAFDVHCNSFFPAFVILYVVQ-YFLSPLLVAHGFFPALLSNLLFVVAISYYHYLNF 697
+EW YAFDVH N+FFP ++L+ +Q +F PL+ F + N ++++A+ YY Y+ F
Sbjct: 193 MEWGYAFDVHLNAFFPPLILLHFIQLFFYHPLISRDWFISTFIGNTIWLLALGYYIYITF 252
Query: 698 LGYD 709
LGY+
Sbjct: 253 LGYN 256
>sw|P36125|YK10_YEAST Hypothetical 32.0 kDa protein in SAP190-SPO14
intergenic region.
Length = 273
Score = 136 bits (343), Expect = 5e-31
Identities = 84/236 (35%), Positives = 126/236 (53%), Gaps = 14/236 (5%)
Frame = +2
Query: 164 LRRIVKWQQR-DIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
+RR+ K + D+E W+M HL P+ Y+ Y +QTKNQWARDDP+F + I +
Sbjct: 42 IRRLFKTPKNLDLETASWEMFHLIFHPRKAYRSIYYQRQTKNQWARDDPSFFIFQIALIS 101
Query: 341 FAT---SAYCAAYGESASHAALTITS--------VVFLHFLFAGIVLATLCWFLTN-SYL 484
++ S Y + + + AL+I +V L F G ++AT+ + L N S+
Sbjct: 102 LSSIIWSIYNSGFNNDSDMGALSIIGHFFKSLVMMVILDFFIFGFIMATIFYLLLNRSHF 161
Query: 485 REEPNSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFV 664
+ + + + V VEW Y FDVHCNSF + LY +Q+ L P++ + L+ N L+
Sbjct: 162 KFKSSQNSV---VEWAYCFDVHCNSFLIILLCLYFIQFLLLPIINLQNWISLLIGNSLYC 218
Query: 665 VAISYYHYLNFLGYDVLPFLDRTTFFLYP-IGLVIILSPLMILIGFNPTRYFLSLY 829
AI +Y L F GY+ LPFL F L P +GL II L+ L G + ++ LS Y
Sbjct: 219 FAIGHYFILTFYGYNQLPFLKNLNFILLPTLGLSIIY--LISLFGIDLSKK-LSFY 271
>sptr|Q8PXV0|Q8PXV0 Hypothetical protein MM1116.
Length = 543
Score = 35.0 bits (79), Expect = 2.2
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = +2
Query: 563 FPAFVILYVVQYFLSPLLVAHGFF---PALLSNLLFVVAISYYHYLNFLGYDVLPFLDRT 733
+P F++LY+ +FL + + F P +NL F++ + + LGY V L R
Sbjct: 321 YPRFLLLYIASFFLELCFLLNPFIPYPPDRFANLSFII----FAQIPLLGYSVYIVLLRK 376
Query: 734 TFFLYPIGLVIILSPLMILIGFNPTRYFLSLY 829
YPIG L ++++GF T F S +
Sbjct: 377 G---YPIG----LGAAILVLGFVWTLGFFSCF 401
>sptr|Q8EQG3|Q8EQG3 Hypothetical conserved protein.
Length = 257
Score = 34.3 bits (77), Expect = 3.7
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 15/139 (10%)
Frame = +2
Query: 392 ALTITSVVFLHFLFAGIV--------LATLCWFLTNSYLREEPNSHVVEQRVEWLYAFDV 547
A++ T +++++F AG+V LA W + L E++V
Sbjct: 67 AISPTEIIWVYFSMAGLVAIIGTIPILAYQVWAFISPALTSR------EKKVSL------ 114
Query: 548 HCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLS--NLLFVVAISYYHYLNFLGYDVLPF 721
S+ PA +L+++ ++ H FP LLS +F + + Y FL LPF
Sbjct: 115 ---SYIPALFLLFIIGLVFGYIIFIHLIFPFLLSLNEDMFNIMFTVDRYFTFLMKITLPF 171
Query: 722 -----LDRTTFFLYPIGLV 763
L FL +G+V
Sbjct: 172 AFLFELPLIAMFLTSLGIV 190
>sptr|Q23340|Q23340 ZC455.8 protein.
Length = 301
Score = 34.3 bits (77), Expect = 3.7
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Frame = +2
Query: 383 SHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREEPNSHVVEQR--VEWLYAFDVHCN 556
++ A ++TSV F+ +F ++ L W NS ++ +P H+ + R V+ Y+ V
Sbjct: 6 NYRAFSVTSVGFIASIFIVVLNIRLLWKFQNSLMKNKPEYHLFKIRFIVDICYSLTVSIY 65
Query: 557 ------SFFPAFVILYVVQYFLSPLL----VAHGFFPALLSNLLFVVAI 673
S+ F++ F++ LL V+ FF L ++ ++A+
Sbjct: 66 YFSLIVSYISPFILFQYKSLFIATLLSSNVVSTRFFLGALISIERLIAV 114
>sw|P34855|NU5M_APILI NADH-ubiquinone oxidoreductase chain 5 (EC
1.6.5.3).
Length = 554
Score = 34.3 bits (77), Expect = 3.7
Identities = 23/88 (26%), Positives = 45/88 (51%)
Frame = +2
Query: 611 LLVAHGFFPALLSNLLFVVAISYYHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMIL 790
L+ H F A+ +L+F+ SY HY+ + D+ + +++YP+ +I++ ++ L
Sbjct: 286 LVFLHLFIHAMFKSLMFMCVGSYMHYM-YSNQDIRMYYG--MYYIYPMKSMILIFSILSL 342
Query: 791 IGFNPTRYFLSLYFG*SLRLECHVQAKI 874
GF FL Y+ L +E +K+
Sbjct: 343 CGFP----FLVGYYSKDLIIEMFFFSKM 366
>sptr|Q85JB6|Q85JB6 Cytochrome c oxidase subunit 1 (EC 1.9.3.1).
Length = 487
Score = 33.9 bits (76), Expect = 4.8
Identities = 39/182 (21%), Positives = 73/182 (40%), Gaps = 20/182 (10%)
Frame = +2
Query: 305 PAFVVILILFLVFATSAYCAAYGESASHAALTITS-VVFLHFLFA-GIVLATLCWFLTNS 478
PAF VI + FA + G + ++ + +V+ H L+ G+ + T +F +
Sbjct: 249 PAFGVISHVISRFAIKPIFGSIGMIYAMMSIGLLGFIVWSHHLYVVGLDVDTRAYFTAAT 308
Query: 479 YLREEPNSHVVEQRVEWLYAFDVHCNS---FFPAFVILYVVQYFLSPLL----------- 616
+ P + + LY ++H + F F++L+ V +L
Sbjct: 309 MIIAVPTGIKMFSWLATLYGGNIHLYTPMLFALGFLLLFTVGGVTGVILANASLDIAFHD 368
Query: 617 ----VAHGFFPALLSNLLFVVAISYYHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPLM 784
VAH + + + + A YY GY+ FL R F+ + IG+ ++ P+
Sbjct: 369 TYYVVAHFHYVLSMGAVFGMFAAFYYWIGKMTGYNYPEFLGRLHFWTFIIGVNLVFFPMH 428
Query: 785 IL 790
L
Sbjct: 429 FL 430
>sptr|Q87H28|Q87H28 Cytochrome BD2, subunit I.
Length = 454
Score = 33.5 bits (75), Expect = 6.3
Identities = 31/120 (25%), Positives = 54/120 (45%)
Frame = +2
Query: 437 GIVLATLCWFLTNSYLREEPNSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLL 616
G +++T +NS+++ +V+ RV F + N FP Y L+ +
Sbjct: 138 GTIISTFWILASNSWMQTPQGYEIVDGRVVPTDWFAIVFNPSFP---------YRLAHMS 188
Query: 617 VAHGFFPALLSNLLFVVAISYYHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMILIG 796
VA A +S+ LFV A + +H L + T F +G+++ L+PL +IG
Sbjct: 189 VA-----AFVSSALFVGASAAWHLLRGNQSTAV-----KTMFSMSLGILVFLAPLQAVIG 238
>sptr|Q36108|Q36108 NADH dehydrogenase.
Length = 121
Score = 33.1 bits (74), Expect = 8.2
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 11/100 (11%)
Frame = +2
Query: 428 LFAGIVLATLCW----FLTNSYLREEPNSHVVEQRVEWLYAFDVHCNSFFPA-FVILYVV 592
L GI+ L W F TN + + + + ++ N F A F+ILY V
Sbjct: 14 LIFGIIFCLLTWGAEYFYTNKHQLTKKQFYECGFKALSELNIQINLNFFMLAVFLILYDV 73
Query: 593 QY-FLSPLLVAHGFFPALLSNL-----LFVVAISYYHYLN 694
++ FL P+L + F ++ L LF+VA YY +L+
Sbjct: 74 EFTFLFPILFNYSIFSSIEFTLTFLFLLFIVASLYYDWLH 113
>sptr|Q8VQE3|Q8VQE3 Histidine kinase sensor protein (Fragment).
Length = 577
Score = 33.1 bits (74), Expect = 8.2
Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 23/172 (13%)
Frame = +2
Query: 317 VILILFLVFATSAYCAAYGE------SASHAALTITSVVFLHFLFAGIVLATLCWFLTNS 478
+ILI+FL+ A+ AY +A G S T+TSV+ + LF L L N
Sbjct: 146 LILIIFLLSASLAYLSAGGSAKGDLLSRCIMVFTLTSVMLNYLLFLYQYFKELGTVLFNK 205
Query: 479 ---YLREEPNSHVVEQ--RVEWL---YAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFF 634
L P ++V + R + Y ++ SFF +F+I+ V YF S L+ +
Sbjct: 206 KVFILYSIPFLNLVFELFRTQLFFRHYVPKINLLSFFISFIIVSV--YFGSILIKSKDTE 263
Query: 635 PALLSNLLFVVAI-SYYHYL-------NFLGYD-VLPFLDRTTFFLYPIGLV 763
A + +L ++ I S+ +L FLG D + FL + FL P LV
Sbjct: 264 QAHIIKVLTIINILSFSPFLFLYIIPYVFLGTDGISSFLAASFMFLIPFSLV 315
>sptr|Q9P6R5|Q9P6R5 Hypothetical transmembrane protein.
Length = 815
Score = 33.1 bits (74), Expect = 8.2
Identities = 38/190 (20%), Positives = 77/190 (40%), Gaps = 12/190 (6%)
Frame = +2
Query: 239 PKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV---FATSAYCAAYGESASHAALTITS 409
P +V+ +Y + T N+W P I F++ F+T + S S +
Sbjct: 15 PLLVFITLQYPRWTFNKWKALLPVSAYISFYFIIISSFSTHLNILYFNLSKSMVSFAQVP 74
Query: 410 VVFLHFLFAGIVLATLCWFLTNSYLREEPNSHVVEQRVEWLYAF----DVHCNSFFPAFV 577
+ L +L ++ + + E+ + + ++ A ++C+ + +
Sbjct: 75 LEEYLNLLGHSLLTSIIYVMLKRRFYEQSVYNAKNGMLVYVNAIFAVVGIYCSVVHKSIL 134
Query: 578 ILYVVQYFLSPLLVAHGFFPALLSNLLFVVAIS----YYHYLNFLGY-DVLPFLDRTTFF 742
+ V F+ P+L F ++S +V+I YY ++ F+ L DR+ F
Sbjct: 135 QIGVTLTFICPMLSFLLCFRIIISQKAALVSIGISTLYYCFVQFMEVKSALISYDRSLFK 194
Query: 743 LYPIGLVIIL 772
YPI L ++L
Sbjct: 195 FYPIDLFVLL 204
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 892,424,282
Number of Sequences: 1272877
Number of extensions: 19586889
Number of successful extensions: 55668
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 52644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55627
length of database: 406,886,216
effective HSP length: 125
effective length of database: 247,776,591
effective search space used: 68386339116
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)