BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 2621786.2.1 (623 letters) Database: /db/trembl-ebi/tmp/swall 1,165,242 sequences; 374,381,506 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sptr|Q9M7I6|Q9M7I6 Root cap-specific protein. 254 5e-67 sw|Q9SNY3|GMD1_ARATH GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (... 206 1e-52 sptr|Q9SD30|Q9SD30 GDP-D-mannose-4, 6-dehydratase (MUR1). 205 4e-52 sptr|P93031|P93031 GDP-D-mannose-4,6-dehydratase. 205 4e-52 sptr|Q8LFY4|Q8LFY4 GDP-D-mannose-4,6-dehydratase MUR1. 205 4e-52 sptr|Q8DL63|Q8DL63 GDP-mannose 4,6-dehydratase. 139 2e-32 sptr|Q9ZAY7|Q9ZAY7 Putative GDP-D-mannose dehydratase. 138 6e-32 sptr|Q9EYP6|Q9EYP6 GDP-mannose 4,6-dehydratase (EC 4.2.1.47). 136 2e-31 sptr|P72586|P72586 GDP-D-mannose dehydratase. 134 8e-31 sptr|Q9EW99|Q9EW99 PimJ protein. 127 8e-29 sptr|Q93N54|Q93N54 GDP-D-mannose dehydratase (GDP-mannose 4,6-de... 127 1e-28 sptr|Q93NY0|Q93NY0 AmphDIII. 127 1e-28 sw|Q51366|GM4D_PSEAE GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (... 125 5e-28 sptr|O26433|O26433 GDP-D-mannose dehydratase. 124 8e-28 sptr|Q9EWB7|Q9EWB7 GDP-manose 4,6-dehydratase (Fragment). 123 1e-27 sw|Q9VMW9|GMDS_DROME Probable GDP-mannose 4,6 dehydratase (EC 4.... 122 2e-27 sptrnew|AAF52189|AAF52189 CG8890-PA. 122 2e-27 sptr|Q8T3U5|Q8T3U5 GM12762p. 122 2e-27 sptr|O85352|O85352 LPSA (GDP-mannose 4,6-dehydratase). 122 3e-27 sptr|Q86EN4|Q86EN4 Clone ZZD1594 mRNA sequence. 120 2e-26 sw|O60547|GMDS_HUMAN GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (... 120 2e-26 sptr|Q9WVU4|Q9WVU4 MDHTA protein. 119 2e-26 sptr|Q8K3X3|Q8K3X3 GDP-mannose 4,6-dehydratase. 119 4e-26 sptr|Q8K0C9|Q8K0C9 Hypothetical protein. 119 4e-26 sptr|O86292|O86292 GsbA protein. 118 5e-26 sptr|P71790|P71790 Hypothetical protein Rv1511. 118 5e-26 sptr|Q8RJX3|Q8RJX3 Putative 4,6-hexose dehydratase. 118 5e-26 sptr|Q97H33|Q97H33 GDP-D-mannose dehydratase. 116 2e-25 sptr|O86297|O86297 GsbA protein. 116 2e-25 sptrnew|EAA04772|EAA04772 AgCP3848. 116 2e-25
>sptr|Q9M7I6|Q9M7I6 Root cap-specific protein. Length = 377 Score = 254 bits (649), Expect = 5e-67 Identities = 122/124 (98%), Positives = 124/124 (100%) Frame = +2 Query: 2 SSARDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVID 181 S+ARDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVID Sbjct: 254 SAARDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVID 313 Query: 182 KKYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIELAKKEKVLVDAGFRDP 361 KKYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIELAKKEKVLVDAG+RDP Sbjct: 314 KKYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIELAKKEKVLVDAGYRDP 373 Query: 362 KQQP 373 KQQP Sbjct: 374 KQQP 377 >sw|Q9SNY3|GMD1_ARATH GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (GDP-D-mannose dehydratase) (GMD). Length = 361 Score = 206 bits (525), Expect = 1e-52 Identities = 93/123 (75%), Positives = 112/123 (91%) Frame = +2 Query: 5 SARDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDK 184 ++RDWGFAGDYVEAMWLMLQQE+P DYVVATEESHTV+EFL +FGY GL+WKDHV IDK Sbjct: 239 ASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEESHTVKEFLDVSFGYVGLNWKDHVEIDK 298 Query: 185 KYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIELAKKEKVLVDAGFRDPK 364 +YFRP EVD+LKGDA+KA+++L WKPKVGF++LV+MMVD D+ELAK+EKVL DAG+ D + Sbjct: 299 RYFRPTEVDNLKGDASKAKEMLGWKPKVGFEKLVKMMVDEDLELAKREKVLADAGYMDAQ 358 Query: 365 QQP 373 QQP Sbjct: 359 QQP 361 >sptr|Q9SD30|Q9SD30 GDP-D-mannose-4, 6-dehydratase (MUR1). Length = 373 Score = 205 bits (521), Expect = 4e-52 Identities = 93/123 (75%), Positives = 113/123 (91%) Frame = +2 Query: 5 SARDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDK 184 ++RDWGFAGDYVEAMWLMLQQE+P DYVVATEE HTVEEFL +FGY GL+WKD+V ID+ Sbjct: 251 ASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQ 310 Query: 185 KYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIELAKKEKVLVDAGFRDPK 364 +YFRPAEVD+L+GDA+KA++VL WKP+VGF++LV+MMVD D+ELAK+EKVLVDAG+ D K Sbjct: 311 RYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLELAKREKVLVDAGYMDAK 370 Query: 365 QQP 373 QQP Sbjct: 371 QQP 373 >sptr|P93031|P93031 GDP-D-mannose-4,6-dehydratase. Length = 373 Score = 205 bits (521), Expect = 4e-52 Identities = 93/123 (75%), Positives = 113/123 (91%) Frame = +2 Query: 5 SARDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDK 184 ++RDWGFAGDYVEAMWLMLQQE+P DYVVATEE HTVEEFL +FGY GL+WKD+V ID+ Sbjct: 251 ASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQ 310 Query: 185 KYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIELAKKEKVLVDAGFRDPK 364 +YFRPAEVD+L+GDA+KA++VL WKP+VGF++LV+MMVD D+ELAK+EKVLVDAG+ D K Sbjct: 311 RYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLELAKREKVLVDAGYMDAK 370 Query: 365 QQP 373 QQP Sbjct: 371 QQP 373 >sptr|Q8LFY4|Q8LFY4 GDP-D-mannose-4,6-dehydratase MUR1. Length = 373 Score = 205 bits (521), Expect = 4e-52 Identities = 93/123 (75%), Positives = 113/123 (91%) Frame = +2 Query: 5 SARDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDK 184 ++RDWGFAGDYVEAMWLMLQQE+P DYVVATEE HTVEEFL +FGY GL+WKD+V ID+ Sbjct: 251 ASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQ 310 Query: 185 KYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIELAKKEKVLVDAGFRDPK 364 +YFRPAEVD+L+GDA+KA++VL WKP+VGF++LV+MMVD D+ELAK+EKVLVDAG+ D K Sbjct: 311 RYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLELAKREKVLVDAGYMDAK 370 Query: 365 QQP 373 QQP Sbjct: 371 QQP 373 >sptr|Q8DL63|Q8DL63 GDP-mannose 4,6-dehydratase. Length = 359 Score = 139 bits (351), Expect = 2e-32 Identities = 64/100 (64%), Positives = 77/100 (77%) Frame = +2 Query: 11 RDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDKKY 190 RDWG+A DYV AMWLMLQQEQP DYVVAT E+H+V EFL+ AFGY L+W+D+V D +Y Sbjct: 229 RDWGYAKDYVRAMWLMLQQEQPDDYVVATGETHSVREFLELAFGYVDLNWEDYVEFDPRY 288 Query: 191 FRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDI 310 RP EVD L GD TKA+ VL W+P V F ELV +MV+ D+ Sbjct: 289 LRPTEVDLLLGDPTKAKTVLGWQPSVTFPELVALMVEADL 328 >sptr|Q9ZAY7|Q9ZAY7 Putative GDP-D-mannose dehydratase. Length = 359 Score = 138 bits (347), Expect = 6e-32 Identities = 61/101 (60%), Positives = 80/101 (79%) Frame = +2 Query: 11 RDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDKKY 190 RDWG+A DYV AMWLMLQQ+QP DYV+AT E+H+V EFL+ AF + L W+D+V D++Y Sbjct: 229 RDWGYAKDYVRAMWLMLQQDQPDDYVIATGETHSVREFLELAFSHVNLDWQDYVEFDERY 288 Query: 191 FRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIE 313 RPAEVD L GD+TKA++ L W+P V F+ELV +MVD D++ Sbjct: 289 LRPAEVDLLIGDSTKAQQKLGWRPSVTFKELVALMVDADLQ 329 >sptr|Q9EYP6|Q9EYP6 GDP-mannose 4,6-dehydratase (EC 4.2.1.47). Length = 323 Score = 136 bits (342), Expect = 2e-31 Identities = 64/107 (59%), Positives = 83/107 (77%), Gaps = 1/107 (0%) Frame = +2 Query: 11 RDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDKKY 190 RDWGFA DYVE MWLMLQQE+ DYV+AT E H+V EF + AFG+ GL+++D+VV+D K+ Sbjct: 215 RDWGFAKDYVECMWLMLQQEKADDYVIATGEMHSVREFCEIAFGHVGLNYEDYVVVDPKF 274 Query: 191 FRPAEVDSLKGDATKARKVLKWKP-KVGFQELVEMMVDHDIELAKKE 328 FR AEVD L GDA+KA L W P K F++LV MMVD+D++L +K+ Sbjct: 275 FRAAEVDVLLGDASKAINKLGWNPRKTSFEQLVTMMVDNDMDLIRKQ 321 >sptr|P72586|P72586 GDP-D-mannose dehydratase. Length = 362 Score = 134 bits (337), Expect = 8e-31 Identities = 61/102 (59%), Positives = 76/102 (74%) Frame = +2 Query: 5 SARDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDK 184 S RDWG+A DYV AMW MLQQEQP DYVVAT E+H V+EFL+ AFGY L+W+++V D+ Sbjct: 227 SKRDWGYAKDYVRAMWAMLQQEQPDDYVVATGETHEVKEFLEIAFGYVNLNWQNYVAFDE 286 Query: 185 KYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDI 310 +Y RPAEVD L GD K + L W+P V F ELV +MV+ D+ Sbjct: 287 RYLRPAEVDLLIGDPAKTKAQLGWEPSVTFTELVHLMVEADL 328 >sptr|Q9EW99|Q9EW99 PimJ protein. Length = 343 Score = 127 bits (320), Expect = 8e-29 Identities = 59/109 (54%), Positives = 78/109 (71%) Frame = +2 Query: 5 SARDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDK 184 + RDWGFAGDYV AM LMLQQ++PGDYV+ T E H+V + ++ AF + GL+W+D+V ID Sbjct: 224 AVRDWGFAGDYVRAMHLMLQQDEPGDYVIGTGEMHSVRDAVRIAFEHVGLNWEDYVSIDP 283 Query: 185 KYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIELAKKEK 331 RPAEV+ L DA +AR L W+P V F EL+ MMVD D+ A +E+ Sbjct: 284 SLVRPAEVEILCADAERARTQLGWEPSVDFPELMRMMVDSDLRQASRER 332 >sptr|Q93N54|Q93N54 GDP-D-mannose dehydratase (GDP-mannose 4,6-dehydratase). Length = 348 Score = 127 bits (319), Expect = 1e-28 Identities = 55/101 (54%), Positives = 77/101 (76%) Frame = +2 Query: 11 RDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDKKY 190 RDWG+A DYVEAMWLMLQQ+ P DYV+AT E+ +V+E L+ +F L+W+D VVID KY Sbjct: 225 RDWGYAKDYVEAMWLMLQQDTPDDYVIATGETWSVKELLEYSFNLVNLNWRDFVVIDPKY 284 Query: 191 FRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIE 313 +RPAEVD L G+ KA++ L W+P F +L+++M++HD + Sbjct: 285 YRPAEVDLLLGEPKKAKEKLGWQPNTSFHKLIKIMLEHDFK 325 >sptr|Q93NY0|Q93NY0 AmphDIII. Length = 344 Score = 127 bits (319), Expect = 1e-28 Identities = 60/113 (53%), Positives = 78/113 (69%) Frame = +2 Query: 5 SARDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDK 184 + RDWG+AGDYV AM LMLQQ+ P DYV+ T E HTV + ++ AF + GL WKD+VV+D Sbjct: 225 AVRDWGYAGDYVRAMHLMLQQDAPDDYVIGTGEMHTVRDAVRFAFEHVGLDWKDYVVVDP 284 Query: 185 KYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIELAKKEKVLVD 343 RPAEV+ L D++KA+ L WKP V FQEL+ MMVD D+ ++ L D Sbjct: 285 DLVRPAEVEVLCADSSKAQAQLGWKPSVDFQELMRMMVDADLASVSRQNELDD 337 >sw|Q51366|GM4D_PSEAE GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose dehydratase). Length = 323 Score = 125 bits (313), Expect = 5e-28 Identities = 58/106 (54%), Positives = 75/106 (70%) Frame = +2 Query: 11 RDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDKKY 190 RDWGFAGDYVEAMWLMLQQ++ DYVVAT + TV + Q AF + GL ++D + ID + Sbjct: 218 RDWGFAGDYVEAMWLMLQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAF 277 Query: 191 FRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIELAKKE 328 FRPAEVD L G+ KA++VL WKP+ EL+ MMV+ D+ +E Sbjct: 278 FRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLRRVSRE 323 >sptr|O26433|O26433 GDP-D-mannose dehydratase. Length = 348 Score = 124 bits (311), Expect = 8e-28 Identities = 55/101 (54%), Positives = 78/101 (77%) Frame = +2 Query: 11 RDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDKKY 190 RDWG+A DYVEAM +MLQ ++P D+V+AT E+HTV EF + +F GL W+D+V +DK++ Sbjct: 217 RDWGYAPDYVEAMHMMLQHKEPDDFVIATAETHTVREFCEKSFEELGLDWQDYVKVDKRF 276 Query: 191 FRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIE 313 FRP +V+ L GD +KAR+ L W+PK F+ELV++MV D+E Sbjct: 277 FRPLDVNYLCGDYSKARENLGWQPKTKFEELVKIMVREDLE 317 >sptr|Q9EWB7|Q9EWB7 GDP-manose 4,6-dehydratase (Fragment). Length = 130 Score = 123 bits (309), Expect = 1e-27 Identities = 57/107 (53%), Positives = 76/107 (71%) Frame = +2 Query: 11 RDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDKKY 190 RDWGFAGDYV AM LMLQQEQ GDYVV T H V + + AF + GL W++HVV+D Sbjct: 13 RDWGFAGDYVRAMHLMLQQEQAGDYVVGTGAMHQVRDAARIAFEHVGLDWQEHVVVDPGL 72 Query: 191 FRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIELAKKEK 331 RPAEV++L D+ AR+ L W+P+V F++L+ MMV+ D+ A +E+ Sbjct: 73 VRPAEVETLCADSGNARRELGWEPEVDFEQLMRMMVESDLRQASRER 119 >sw|Q9VMW9|GMDS_DROME Probable GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (GDP-D-mannose dehydratase) (Dm-gmd). Length = 387 Score = 122 bits (307), Expect = 2e-27 Identities = 64/127 (50%), Positives = 81/127 (63%), Gaps = 17/127 (13%) Frame = +2 Query: 5 SARDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAG--LSWKD---- 166 S RDWG A DYVEAMW+MLQ+E P DYV+AT E+H+V EF++AAF + ++WK Sbjct: 260 SKRDWGHASDYVEAMWMMLQRESPSDYVIATGETHSVREFVEAAFKHIDREITWKGKGVD 319 Query: 167 -----------HVVIDKKYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIE 313 V I+ KYFRP EVD L+GDA+KA + L W PKV F ELV M+ DIE Sbjct: 320 EVGVENGTGIVRVRINPKYFRPTEVDLLQGDASKANRELNWTPKVTFVELVSDMMKADIE 379 Query: 314 LAKKEKV 334 L +K + Sbjct: 380 LMRKNPI 386 >sptrnew|AAF52189|AAF52189 CG8890-PA. Length = 395 Score = 122 bits (307), Expect = 2e-27 Identities = 64/127 (50%), Positives = 81/127 (63%), Gaps = 17/127 (13%) Frame = +2 Query: 5 SARDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAG--LSWKD---- 166 S RDWG A DYVEAMW+MLQ+E P DYV+AT E+H+V EF++AAF + ++WK Sbjct: 268 SKRDWGHASDYVEAMWMMLQRESPSDYVIATGETHSVREFVEAAFKHIDREITWKGKGVD 327 Query: 167 -----------HVVIDKKYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIE 313 V I+ KYFRP EVD L+GDA+KA + L W PKV F ELV M+ DIE Sbjct: 328 EVGVENGTGIVRVRINPKYFRPTEVDLLQGDASKANRELNWTPKVTFVELVSDMMKADIE 387 Query: 314 LAKKEKV 334 L +K + Sbjct: 388 LMRKNPI 394 >sptr|Q8T3U5|Q8T3U5 GM12762p. Length = 395 Score = 122 bits (307), Expect = 2e-27 Identities = 64/127 (50%), Positives = 81/127 (63%), Gaps = 17/127 (13%) Frame = +2 Query: 5 SARDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAG--LSWKD---- 166 S RDWG A DYVEAMW+MLQ+E P DYV+AT E+H+V EF++AAF + ++WK Sbjct: 268 SKRDWGHASDYVEAMWMMLQRESPSDYVIATGETHSVREFVEAAFKHIDREITWKGKGVD 327 Query: 167 -----------HVVIDKKYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIE 313 V I+ KYFRP EVD L+GDA+KA + L W PKV F ELV M+ DIE Sbjct: 328 EVGVESGTGIVRVRINPKYFRPTEVDLLQGDASKANRELNWTPKVTFVELVSDMMKADIE 387 Query: 314 LAKKEKV 334 L +K + Sbjct: 388 LMRKNPI 394 >sptr|O85352|O85352 LPSA (GDP-mannose 4,6-dehydratase). Length = 325 Score = 122 bits (306), Expect = 3e-27 Identities = 57/100 (57%), Positives = 72/100 (72%) Frame = +2 Query: 11 RDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDKKY 190 RDWG A DYVEAMWLMLQQE P DYVVAT ++ TV + + AF + GL+++DHV I+ K+ Sbjct: 220 RDWGHAKDYVEAMWLMLQQETPDDYVVATGKTWTVRQMCEVAFAHVGLNYQDHVTINPKF 279 Query: 191 FRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDI 310 RPAEVD L GD KA+ L W+PK Q+++ MVD DI Sbjct: 280 LRPAEVDLLLGDPAKAKAKLGWEPKTTMQQMIAEMVDADI 319 >sptr|Q86EN4|Q86EN4 Clone ZZD1594 mRNA sequence. Length = 364 Score = 120 bits (300), Expect = 2e-26 Identities = 62/130 (47%), Positives = 83/130 (63%), Gaps = 17/130 (13%) Frame = +2 Query: 2 SSARDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAG--LSWK---- 163 ++ RDWGFAGDYV+AMWLMLQ++ P D+V+A+ E H+V EF AF + G L WK Sbjct: 235 NAERDWGFAGDYVKAMWLMLQRDTPEDFVIASGEKHSVREFTNLAFEHVGIHLKWKGTGI 294 Query: 164 DHVVIDK-----------KYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDI 310 D V ID +YFRPAEVD L GD +A++VL W+P F+ELV++MVD D+ Sbjct: 295 DEVGIDSETGNVVVRVNPRYFRPAEVDLLLGDCKRAKEVLNWEPNCSFKELVKLMVDEDM 354 Query: 311 ELAKKEKVLV 340 + + K V Sbjct: 355 NMLESGKTPV 364 >sw|O60547|GMDS_HUMAN GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (GDP-D-mannose dehydratase) (GMD). Length = 372 Score = 120 bits (300), Expect = 2e-26 Identities = 60/121 (49%), Positives = 78/121 (64%), Gaps = 17/121 (14%) Frame = +2 Query: 11 RDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAG--LSW-------- 160 RDWG A DYVEAMWLMLQ ++P D+V+AT E H+V EF++ +F + G + W Sbjct: 247 RDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEV 306 Query: 161 -------KDHVVIDKKYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIELA 319 K HV +D KY+RP EVD L+GD TKA++ L WKP+V F ELV MV D+EL Sbjct: 307 GRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELM 366 Query: 320 K 322 + Sbjct: 367 R 367 >sptr|Q9WVU4|Q9WVU4 MDHTA protein. Length = 343 Score = 119 bits (299), Expect = 2e-26 Identities = 57/100 (57%), Positives = 67/100 (67%) Frame = +2 Query: 11 RDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDKKY 190 RDWG+A +YVE MW MLQ +P DYV+AT +TV EF QAAF + GL W+ HV D +Y Sbjct: 221 RDWGYAPEYVEGMWRMLQAPEPDDYVLATGRGYTVREFAQAAFDHVGLDWQKHVKFDDRY 280 Query: 191 FRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDI 310 RP EVDSL GDA KA + L WK V EL +MVD DI Sbjct: 281 LRPTEVDSLVGDADKAAQSLGWKASVHTGELARIMVDADI 320 >sptr|Q8K3X3|Q8K3X3 GDP-mannose 4,6-dehydratase. Length = 372 Score = 119 bits (297), Expect = 4e-26 Identities = 59/121 (48%), Positives = 78/121 (64%), Gaps = 17/121 (14%) Frame = +2 Query: 11 RDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAG--LSW-------- 160 RDWG A DYVEAMWLMLQ ++P D+V+AT E H+V EF++ +F + G + W Sbjct: 247 RDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIGKTIVWEGKNENEV 306 Query: 161 -------KDHVVIDKKYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIELA 319 K HV +D KY+RP EVD L+GD +KA++ L WKP+V F ELV MV D+EL Sbjct: 307 GRCKETGKIHVTVDLKYYRPTEVDFLQGDCSKAQQKLNWKPRVAFDELVREMVQADVELM 366 Query: 320 K 322 + Sbjct: 367 R 367 >sptr|Q8K0C9|Q8K0C9 Hypothetical protein. Length = 372 Score = 119 bits (297), Expect = 4e-26 Identities = 59/121 (48%), Positives = 78/121 (64%), Gaps = 17/121 (14%) Frame = +2 Query: 11 RDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAG--LSW-------- 160 RDWG A DYVEAMWLMLQ ++P D+V+AT E H+V EF++ +F + G + W Sbjct: 247 RDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIGKTIVWEGKNENEV 306 Query: 161 -------KDHVVIDKKYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIELA 319 K HV +D KY+RP EVD L+GD +KA++ L WKP+V F ELV MV D+EL Sbjct: 307 GRCKETGKVHVTVDLKYYRPTEVDFLQGDCSKAQQKLNWKPRVAFDELVREMVQADVELM 366 Query: 320 K 322 + Sbjct: 367 R 367 >sptr|O86292|O86292 GsbA protein. Length = 343 Score = 118 bits (296), Expect = 5e-26 Identities = 56/100 (56%), Positives = 67/100 (67%) Frame = +2 Query: 11 RDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDKKY 190 RDWG+A +YVE MW MLQ +P DYV+AT +TV EF QAAF + GL W+ HV D +Y Sbjct: 221 RDWGYAPEYVEGMWRMLQAPEPDDYVLATGRGYTVREFAQAAFDHVGLDWQKHVKFDDRY 280 Query: 191 FRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDI 310 RP EVDSL GDA +A + L WK V EL +MVD DI Sbjct: 281 LRPTEVDSLVGDADRAAQSLGWKASVHTGELARIMVDADI 320 >sptr|P71790|P71790 Hypothetical protein Rv1511. Length = 340 Score = 118 bits (296), Expect = 5e-26 Identities = 54/102 (52%), Positives = 72/102 (70%) Frame = +2 Query: 5 SARDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDK 184 + RDWG+A +YVE MW MLQ ++P D+V+AT TV EF +AAF +AGL W+ +V D+ Sbjct: 219 AVRDWGYAPEYVEGMWRMLQTDEPDDFVLATGRGFTVREFARAAFEHAGLDWQQYVKFDQ 278 Query: 185 KYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDI 310 +Y RP EVDSL GDATKA ++L W+ V EL +MVD D+ Sbjct: 279 RYLRPTEVDSLIGDATKAAELLGWRASVHTDELARIMVDADM 320 >sptr|Q8RJX3|Q8RJX3 Putative 4,6-hexose dehydratase. Length = 340 Score = 118 bits (296), Expect = 5e-26 Identities = 56/107 (52%), Positives = 73/107 (68%) Frame = +2 Query: 11 RDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDKKY 190 RDWGFAGDYV AM LMLQQ P DYV+ T +H+V E ++ AF AGL W+ HVV+D Sbjct: 229 RDWGFAGDYVRAMHLMLQQPVPRDYVIGTGRTHSVREAVEIAFAAAGLDWRRHVVVDPGL 288 Query: 191 FRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIELAKKEK 331 RPA+V+ L DA+ AR+ L WKP+ F EL+E MV+ D+ L + + Sbjct: 289 VRPADVELLCADASLARRDLDWKPETEFAELMEAMVESDLRLVARTR 335 >sptr|Q97H33|Q97H33 GDP-D-mannose dehydratase. Length = 355 Score = 116 bits (291), Expect = 2e-25 Identities = 58/121 (47%), Positives = 80/121 (66%), Gaps = 17/121 (14%) Frame = +2 Query: 2 SSARDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAG--LSW----- 160 ++ RDWG+AGDYVEAMWLMLQ++ P DYV+AT E+HTV EF++ AF +AG + W Sbjct: 220 NAKRDWGYAGDYVEAMWLMLQKDTPKDYVIATGETHTVREFVEKAFKFAGIKIKWIGQGI 279 Query: 161 ----------KDHVVIDKKYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDI 310 K V ++ +YFRP EV+ L GD + A + L W+ KV F+ELV MMV+ D+ Sbjct: 280 EEKGIDLKTGKTLVDVNPRYFRPTEVELLLGDPSMAERELGWRRKVNFEELVYMMVEEDL 339 Query: 311 E 313 + Sbjct: 340 K 340 >sptr|O86297|O86297 GsbA protein. Length = 343 Score = 116 bits (291), Expect = 2e-25 Identities = 56/100 (56%), Positives = 66/100 (66%) Frame = +2 Query: 11 RDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDKKY 190 RDWG+A +YVE MW MLQ +P DYV+AT +TV EF QAAF + GL W+ V D +Y Sbjct: 221 RDWGYAPEYVEGMWRMLQAPEPDDYVLATGRGYTVREFAQAAFDHVGLDWQKRVKFDDRY 280 Query: 191 FRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDI 310 RP EVDSL GDA KA + L WK V EL +MVD DI Sbjct: 281 LRPTEVDSLVGDADKAAQSLGWKASVHTGELARIMVDADI 320 >sptrnew|EAA04772|EAA04772 AgCP3848. Length = 362 Score = 116 bits (290), Expect = 2e-25 Identities = 62/123 (50%), Positives = 80/123 (65%), Gaps = 17/123 (13%) Frame = +2 Query: 5 SARDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAG--LSWK----D 166 S RDWG A DYVEAMWLM+QQE+P D+V+AT E+H+V EF++ AF Y G + W+ D Sbjct: 235 SKRDWGHAKDYVEAMWLMMQQERPEDFVIATGETHSVREFVEQAFRYIGREIEWRGTGVD 294 Query: 167 HVVIDK-----------KYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIE 313 V ++K K+FRP EVD L GDA+KA+ L W PKV F EL+ M+ DI+ Sbjct: 295 EVGVEKGTDTVRVRINPKFFRPTEVDLLLGDASKAKAQLGWSPKVTFLELIADMMAADIQ 354 Query: 314 LAK 322 L K Sbjct: 355 LMK 357 Database: /db/trembl-ebi/tmp/swall Posted date: Jul 11, 2003 8:27 PM Number of letters in database: 374,381,506 Number of sequences in database: 1,165,242 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 390,195,510 Number of Sequences: 1165242 Number of extensions: 7833975 Number of successful extensions: 26155 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 24940 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 26046 length of database: 374,381,506 effective HSP length: 117 effective length of database: 238,048,192 effective search space used: 21424337280 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
S1: 41 (21.7 bits)