BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2576652.2.5
(1033 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptr|Q8H2I4|Q8H2I4 Putative signal peptidase subunit. 321 1e-86
sptr|Q9SSR2|Q9SSR2 F6D8.18 protein (Putative signal peptidase su... 314 1e-84
sptr|Q9LW08|Q9LW08 Signal sequence processing protein, peptidase... 288 1e-76
sptrnew|AAH10484|AAH10484 Signal peptidase complex. 207 1e-52
sw|Q9R0P6|SPC4_MOUSE Microsomal signal peptidase 18 kDa subunit ... 207 1e-52
sw|Q9WTR7|SPC3_RAT Microsomal signal peptidase 21 kDa subunit (E... 207 2e-52
sptrnew|AAH37187|AAH37187 RIKEN cDNA 1810029G24. 207 3e-52
sw|Q9D8V7|SPC3_MOUSE Microsomal signal peptidase 21 kDa subunit ... 207 3e-52
sw|P13679|SPC3_CANFA Microsomal signal peptidase 21 kDa subunit ... 207 3e-52
sptrnew|EAA02035|EAA02035 AgCP7174 (Fragment). 206 3e-52
sptrnew|EAA08439|EAA08439 AgCP3056 (Fragment). 206 3e-52
sw|Q9BY50|SPC3_HUMAN Microsomal signal peptidase 21 kDa subunit ... 206 6e-52
sw|P21378|SPC4_HUMAN Microsomal signal peptidase 18 kDa subunit ... 206 6e-52
sptrnew|AAH54167|AAH54167 Hypothetical protein. 204 1e-51
sw|P42667|SPC4_RAT Microsomal signal peptidase 18 kDa subunit (E... 204 1e-51
sptr|Q9N3D0|Q9N3D0 Hypothetical 20.6 kDa protein. 198 9e-50
sptr|O97066|O97066 Hypothetical BCDNA:GM04682 protein (RH08585p). 198 9e-50
sptrnew|AAP97204|AAP97204 Signal peptidase complex SPC-18. 196 6e-49
sptr|Q86JD4|Q86JD4 Hypothetical protein. 190 3e-47
sptr|Q8ISG0|Q8ISG0 Signal peptidase type I. 165 1e-39
sptrnew|EAA27694|EAA27694 Hypothetical protein. 160 3e-38
sptr|Q8IE14|Q8IE14 Signal peptidase, putative (EC 3.4.-). 152 6e-36
sw|P15367|SC11_YEAST Signal sequence processing protein SEC11 (E... 141 1e-32
sptr|O74323|O74323 Signal sequence processing protein, peptidase. 136 4e-31
sptr|Q8BM48|Q8BM48 Microsomal signal peptidase 21 kDa subunit. 135 1e-30
sptr|Q9BDH8|Q9BDH8 Signal peptidase 18 subunit (Fragment). 128 1e-28
sptr|Q8ISF9|Q8ISF9 Signal peptidase type I (Fragment). 126 4e-28
sptr|Q8SSG0|Q8SSG0 Signal peptidase 18kDa subunit. 119 5e-26
sptrnew|EAA40213|EAA40213 GLP_70_17657_16998. 90 6e-17
sptrnew|EAA16263|EAA16263 Signal peptidase 18 subunit-related (F... 73 8e-12
>sptr|Q8H2I4|Q8H2I4 Putative signal peptidase subunit.
Length = 216
Score = 321 bits (822), Expect = 1e-86
Identities = 170/216 (78%), Positives = 177/216 (81%), Gaps = 36/216 (16%)
Frame = -3
Query: 878 MGFVGDTMESIRSMQIRQVLMQIISLG------------------MIVTSALIIWKGLIV 753
MGF+GDT+ESIRSMQ+RQVL QIISLG MIVTSALIIWKGLIV
Sbjct: 1 MGFIGDTIESIRSMQVRQVLAQIISLGEFLWEWSILSSVGFDFAGMIVTSALIIWKGLIV 60
Query: 752 FTGSESPVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVH 573
TGSESPVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVH
Sbjct: 61 VTGSESPVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVH 120
Query: 572 ERQDTAEVDILTK------------------GDNNFGDDRLLYAHGQLWLQQHHIMGRAV 447
ERQ++AEVDILTK GDNNFGDDRLLYAHGQLWLQQHHIMGRAV
Sbjct: 121 ERQESAEVDILTKGIHHFLFEHHKFLTSGYSGDNNFGDDRLLYAHGQLWLQQHHIMGRAV 180
Query: 446 GYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
G+LPYVGWVTIIMTEKP IKYLLIGALGLLVITSK+
Sbjct: 181 GFLPYVGWVTIIMTEKPIIKYLLIGALGLLVITSKE 216
>sptr|Q9SSR2|Q9SSR2 F6D8.18 protein (Putative signal peptidase
subunit) (Signal peptidase subunit, putative).
Length = 180
Score = 314 bits (805), Expect = 1e-84
Identities = 152/180 (84%), Positives = 169/180 (93%)
Frame = -3
Query: 878 MGFVGDTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEP 699
MG++G+T++SI+S+QIRQ+ Q ISLGMIVTSALIIWK L+ TGSESPVVVVLSGSMEP
Sbjct: 1 MGWIGETVDSIKSIQIRQLFTQAISLGMIVTSALIIWKALMCVTGSESPVVVVLSGSMEP 60
Query: 698 GFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNF 519
GFKRGDILFLHMSKDPIR GEIVVFNVDGR+IPIVHRVIKVHER++T EVD+LTKGDNN+
Sbjct: 61 GFKRGDILFLHMSKDPIRAGEIVVFNVDGRDIPIVHRVIKVHERENTGEVDVLTKGDNNY 120
Query: 518 GDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
GDDRLLYA GQLWL +HHIMGRAVG+LPYVGWVTIIMTEKP IKY+LIGALGLLVITSKD
Sbjct: 121 GDDRLLYAEGQLWLHRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYILIGALGLLVITSKD 180
>sptr|Q9LW08|Q9LW08 Signal sequence processing protein,
peptidase-like protein.
Length = 180
Score = 288 bits (736), Expect = 1e-76
Identities = 144/180 (80%), Positives = 160/180 (88%)
Frame = -3
Query: 878 MGFVGDTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEP 699
MGF+G+T++SI+S++IRQVL Q I+LGMIVTSALIIWK LI TGSESPVVVVLS SMEP
Sbjct: 1 MGFIGETVDSIKSIKIRQVLTQAITLGMIVTSALIIWKALICVTGSESPVVVVLSESMEP 60
Query: 698 GFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNF 519
GF+RGDILFL M+ +PIR GEIVVF+VDGREIPIVHR IKVHER DT VD+LTKGDNN
Sbjct: 61 GFQRGDILFLRMTDEPIRAGEIVVFSVDGREIPIVHRAIKVHERGDTKAVDVLTKGDNND 120
Query: 518 GDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
DD LYA GQLWL +HHIMGRAVG+LPYVGWVTIIMTEKP IKY+LIGALGLLVITSKD
Sbjct: 121 IDDIGLYAEGQLWLHRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYILIGALGLLVITSKD 180
>sptrnew|AAH10484|AAH10484 Signal peptidase complex.
Length = 179
Score = 207 bits (528), Expect = 1e-52
Identities = 101/176 (57%), Positives = 135/176 (76%), Gaps = 1/176 (0%)
Frame = -3
Query: 863 DTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRG 684
D ++ +R M RQ+ Q+++ GMIV+SAL+IWKGL+V TGSESP+VVVLSGSMEP F RG
Sbjct: 5 DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRG 64
Query: 683 DILFL-HMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDR 507
D+LFL + +DPIR GEIVVF ++GREIPIVHRV+K+HE+QD + LTKGDNN DDR
Sbjct: 65 DLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQD-GHIKFLTKGDNNAVDDR 123
Query: 506 LLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
LY GQ WL++ ++GRA G++PY+G VTI+M + P KY ++ LGL V+ ++
Sbjct: 124 GLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 179
>sw|Q9R0P6|SPC4_MOUSE Microsomal signal peptidase 18 kDa subunit (EC
3.4.-.-) (SPase 18 kDa subunit) (SPC18) (Endopeptidase
SP18).
Length = 179
Score = 207 bits (528), Expect = 1e-52
Identities = 101/176 (57%), Positives = 135/176 (76%), Gaps = 1/176 (0%)
Frame = -3
Query: 863 DTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRG 684
D ++ +R M RQ+ Q+++ GMIV+SAL+IWKGL+V TGSESP+VVVLSGSMEP F RG
Sbjct: 5 DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRG 64
Query: 683 DILFL-HMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDR 507
D+LFL + +DPIR GEIVVF ++GREIPIVHRV+K+HE+QD + LTKGDNN DDR
Sbjct: 65 DLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQD-GHIKFLTKGDNNAVDDR 123
Query: 506 LLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
LY GQ WL++ ++GRA G++PY+G VTI+M + P KY ++ LGL V+ ++
Sbjct: 124 GLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 179
>sw|Q9WTR7|SPC3_RAT Microsomal signal peptidase 21 kDa subunit (EC
3.4.-.-) (SPase 21 kDa subunit) (SPC21).
Length = 191
Score = 207 bits (527), Expect = 2e-52
Identities = 104/176 (59%), Positives = 131/176 (74%), Gaps = 1/176 (0%)
Frame = -3
Query: 863 DTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRG 684
D +R M RQ+ Q+++ MIV+SAL+IWKGLIV TGSESP+VVVLSGSMEP F RG
Sbjct: 16 DIFGDLRKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESPIVVVLSGSMEPAFHRG 75
Query: 683 DILFL-HMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDR 507
D+LFL + +DPIR GEIVVF V+GR+IPIVHRVIKVHE+ D ++ LTKGDNN DDR
Sbjct: 76 DLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-DNGDIKFLTKGDNNEVDDR 134
Query: 506 LLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
LY GQ WL++ ++GRA G+LPYVG VTIIM + P KY L+ +G V+ ++
Sbjct: 135 GLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFKYALVAVMGAYVLLKRE 190
>sptrnew|AAH37187|AAH37187 RIKEN cDNA 1810029G24.
Length = 192
Score = 207 bits (526), Expect = 3e-52
Identities = 104/176 (59%), Positives = 131/176 (74%), Gaps = 1/176 (0%)
Frame = -3
Query: 863 DTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRG 684
D +R M RQ+ Q+++ MIV+SAL+IWKGLIV TGSESP+VVVLSGSMEP F RG
Sbjct: 17 DIFGDLRKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESPIVVVLSGSMEPAFHRG 76
Query: 683 DILFL-HMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDR 507
D+LFL + +DPIR GEIVVF V+GR+IPIVHRVIKVHE+ D ++ LTKGDNN DDR
Sbjct: 77 DLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-DNGDIKFLTKGDNNEVDDR 135
Query: 506 LLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
LY GQ WL++ ++GRA G+LPYVG VTIIM + P KY L+ +G V+ ++
Sbjct: 136 GLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFKYALLAVMGAYVLLKRE 191
>sw|Q9D8V7|SPC3_MOUSE Microsomal signal peptidase 21 kDa subunit (EC
3.4.-.-) (SPase 21 kDa subunit) (SPC21).
Length = 191
Score = 207 bits (526), Expect = 3e-52
Identities = 104/176 (59%), Positives = 131/176 (74%), Gaps = 1/176 (0%)
Frame = -3
Query: 863 DTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRG 684
D +R M RQ+ Q+++ MIV+SAL+IWKGLIV TGSESP+VVVLSGSMEP F RG
Sbjct: 16 DIFGDLRKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESPIVVVLSGSMEPAFHRG 75
Query: 683 DILFL-HMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDR 507
D+LFL + +DPIR GEIVVF V+GR+IPIVHRVIKVHE+ D ++ LTKGDNN DDR
Sbjct: 76 DLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-DNGDIKFLTKGDNNEVDDR 134
Query: 506 LLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
LY GQ WL++ ++GRA G+LPYVG VTIIM + P KY L+ +G V+ ++
Sbjct: 135 GLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFKYALLAVMGAYVLLKRE 190
>sw|P13679|SPC3_CANFA Microsomal signal peptidase 21 kDa subunit (EC
3.4.-.-) (SPase 21 kDa subunit) (SPC21).
Length = 191
Score = 207 bits (526), Expect = 3e-52
Identities = 104/176 (59%), Positives = 131/176 (74%), Gaps = 1/176 (0%)
Frame = -3
Query: 863 DTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRG 684
D +R M RQ+ Q+++ MIV+SAL+IWKGLIV TGSESP+VVVLSGSMEP F RG
Sbjct: 16 DIFGDLRKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESPIVVVLSGSMEPAFHRG 75
Query: 683 DILFL-HMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDR 507
D+LFL + +DPIR GEIVVF V+GR+IPIVHRVIKVHE+ D ++ LTKGDNN DDR
Sbjct: 76 DLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-DNGDIKFLTKGDNNEVDDR 134
Query: 506 LLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
LY GQ WL++ ++GRA G+LPYVG VTIIM + P KY L+ +G V+ ++
Sbjct: 135 GLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFKYALLAVMGAYVLLKRE 190
>sptrnew|EAA02035|EAA02035 AgCP7174 (Fragment).
Length = 210
Score = 206 bits (525), Expect = 3e-52
Identities = 103/170 (60%), Positives = 130/170 (76%)
Frame = -3
Query: 848 IRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRGDILFL 669
++ M RQ L Q++S GMIV+SAL+IWKGL+V TGSESP+VVVLSGSMEP F RGD+LFL
Sbjct: 42 VQRMDKRQFLFQMLSFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHRGDLLFL 101
Query: 668 HMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDRLLYAHG 489
+P+R GEIVVF ++GR+IPIVHRVIK+HE+ + V LTKGDNN DDR LYA G
Sbjct: 102 TNQDEPVRVGEIVVFKIEGRDIPIVHRVIKLHEKSN-GTVKFLTKGDNNSVDDRGLYAPG 160
Query: 488 QLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
QLWL + I+GRA G+LPYVG +TI M E P +KY ++G L L V+ ++
Sbjct: 161 QLWLTKKDIVGRARGFLPYVGMITIYMNEYPKLKYGILGLLALYVLVHRE 210
>sptrnew|EAA08439|EAA08439 AgCP3056 (Fragment).
Length = 193
Score = 206 bits (525), Expect = 3e-52
Identities = 103/170 (60%), Positives = 130/170 (76%)
Frame = -3
Query: 848 IRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRGDILFL 669
++ M RQ L Q++S GMIV+SAL+IWKGL+V TGSESP+VVVLSGSMEP F RGD+LFL
Sbjct: 25 VQRMDKRQFLFQMLSFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHRGDLLFL 84
Query: 668 HMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDRLLYAHG 489
+P+R GEIVVF ++GR+IPIVHRVIK+HE+ + V LTKGDNN DDR LYA G
Sbjct: 85 TNQDEPVRVGEIVVFKIEGRDIPIVHRVIKLHEKSN-GTVKFLTKGDNNSVDDRGLYAPG 143
Query: 488 QLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
QLWL + I+GRA G+LPYVG +TI M E P +KY ++G L L V+ ++
Sbjct: 144 QLWLTKKDIVGRARGFLPYVGMITIYMNEYPKLKYGILGLLALYVLVHRE 193
>sw|Q9BY50|SPC3_HUMAN Microsomal signal peptidase 21 kDa subunit (EC
3.4.-.-) (SPase 21 kDa subunit) (SPC21).
Length = 191
Score = 206 bits (523), Expect = 6e-52
Identities = 103/176 (58%), Positives = 131/176 (74%), Gaps = 1/176 (0%)
Frame = -3
Query: 863 DTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRG 684
D ++ M RQ+ Q+++ MIV+SAL+IWKGLIV TGSESP+VVVLSGSMEP F RG
Sbjct: 16 DIFGDLKKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESPIVVVLSGSMEPAFHRG 75
Query: 683 DILFL-HMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDR 507
D+LFL + +DPIR GEIVVF V+GR+IPIVHRVIKVHE+ D ++ LTKGDNN DDR
Sbjct: 76 DLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-DNGDIKFLTKGDNNEVDDR 134
Query: 506 LLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
LY GQ WL++ ++GRA G+LPYVG VTIIM + P KY L+ +G V+ ++
Sbjct: 135 GLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFKYALLAVMGAYVLLKRE 190
>sw|P21378|SPC4_HUMAN Microsomal signal peptidase 18 kDa subunit (EC
3.4.-.-) (SPase 18 kDa subunit) (SPC18) (Endopeptidase
SP18).
Length = 179
Score = 206 bits (523), Expect = 6e-52
Identities = 100/176 (56%), Positives = 135/176 (76%), Gaps = 1/176 (0%)
Frame = -3
Query: 863 DTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRG 684
D ++ +R M RQ+ Q+++ GMIV+SAL+IWKGL+V TGSESP+VVVLSGSMEP F RG
Sbjct: 5 DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRG 64
Query: 683 DILFL-HMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDR 507
D+LFL + +DPIR GEIVVF ++GREIPIVHRV+K+HE+Q+ + LTKGDNN DDR
Sbjct: 65 DLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQN-GHIKFLTKGDNNAVDDR 123
Query: 506 LLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
LY GQ WL++ ++GRA G++PY+G VTI+M + P KY ++ LGL V+ ++
Sbjct: 124 GLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 179
>sptrnew|AAH54167|AAH54167 Hypothetical protein.
Length = 179
Score = 204 bits (520), Expect = 1e-51
Identities = 99/176 (56%), Positives = 135/176 (76%), Gaps = 1/176 (0%)
Frame = -3
Query: 863 DTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRG 684
D ++ +R M RQ+ Q+++ GMIV+SAL+IWKGL+V TGSESP+VVVLSGSMEP F RG
Sbjct: 5 DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRG 64
Query: 683 DILFL-HMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDR 507
D+LFL + DPIR GEIVVF ++GREIPIVHRV+K+HE+++ ++ LTKGDNN DDR
Sbjct: 65 DLLFLTNRVDDPIRVGEIVVFRIEGREIPIVHRVLKIHEKEN-GDIKFLTKGDNNAVDDR 123
Query: 506 LLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
LY GQ WL++ ++GRA G++PY+G VTI+M + P KY ++ LGL V+ ++
Sbjct: 124 GLYKQGQNWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 179
>sw|P42667|SPC4_RAT Microsomal signal peptidase 18 kDa subunit (EC
3.4.-.-) (SPase 18 kDa subunit) (SPC18) (Endopeptidase
SP18).
Length = 179
Score = 204 bits (520), Expect = 1e-51
Identities = 99/176 (56%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
Frame = -3
Query: 863 DTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRG 684
D ++ +R M RQ+ Q+++ GMIV+SAL+IWKGL++ TGSESP+VVVLSGSMEP F RG
Sbjct: 5 DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMLITGSESPIVVVLSGSMEPAFHRG 64
Query: 683 DILFL-HMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDR 507
D+LFL + +DPIR GEIVVF ++GREIPIVHRV+K+HE+QD + LTKGDNN DDR
Sbjct: 65 DLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQD-GHIKFLTKGDNNAVDDR 123
Query: 506 LLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
LY GQ WL++ ++GRA G++PY+G VTI+M + P Y ++ LGL V+ ++
Sbjct: 124 GLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFSYAVLFLLGLFVLVHRE 179
>sptr|Q9N3D0|Q9N3D0 Hypothetical 20.6 kDa protein.
Length = 183
Score = 198 bits (504), Expect = 9e-50
Identities = 105/183 (57%), Positives = 131/183 (71%), Gaps = 3/183 (1%)
Frame = -3
Query: 878 MGFVGDT--MESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSM 705
M F+ D IR M IRQ+ Q ++ M+V+SAL+IWKG++V TGS+SPVVVVLSGSM
Sbjct: 1 MKFLPDVAMFSEIRQMNIRQLFYQCLNFAMVVSSALMIWKGMMVITGSDSPVVVVLSGSM 60
Query: 704 EPGFKRGDILFL-HMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGD 528
EP F RGD+L L + +DP+R G+I VF V+GREIPIVHRVIKVHE+ ILTKGD
Sbjct: 61 EPAFYRGDLLLLTNDLEDPVRVGDITVFKVEGREIPIVHRVIKVHEK-SADNTKILTKGD 119
Query: 527 NNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVIT 348
NN DDR LYA GQLWL + ++GR G LPYVG VTIIM + P +KY ++ LGL V+
Sbjct: 120 NNQVDDRGLYAPGQLWLSRTDVVGRTKGLLPYVGMVTIIMNDYPKLKYAVLAFLGLFVLL 179
Query: 347 SKD 339
K+
Sbjct: 180 HKE 182
>sptr|O97066|O97066 Hypothetical BCDNA:GM04682 protein (RH08585p).
Length = 185
Score = 198 bits (504), Expect = 9e-50
Identities = 100/178 (56%), Positives = 131/178 (73%), Gaps = 1/178 (0%)
Frame = -3
Query: 869 VGDTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFK 690
+ + + M RQ L Q++S MIV+SAL+IWKGL+V TGSESP+VVVLSGSMEP F
Sbjct: 9 IDEMLGDFNRMNKRQSLYQVLSFAMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFH 68
Query: 689 RGDILFL-HMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGD 513
RGD+LFL + ++P+R GEIVVF V+GR+IPIVHRVIK+HE++D V LTKGDNN D
Sbjct: 69 RGDLLFLTNYKEEPVRVGEIVVFKVEGRDIPIVHRVIKLHEKED-GSVKFLTKGDNNNVD 127
Query: 512 DRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
DR LYA QLWL + I+GRA G+LPYVG +TI M E P +K+ ++ L + V+ ++
Sbjct: 128 DRGLYAPNQLWLTKKDIVGRARGFLPYVGIITIFMNEYPKVKWAILSILAIFVLLHRE 185
>sptrnew|AAP97204|AAP97204 Signal peptidase complex SPC-18.
Length = 188
Score = 196 bits (497), Expect = 6e-49
Identities = 95/160 (59%), Positives = 126/160 (78%), Gaps = 1/160 (0%)
Frame = -3
Query: 815 QIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRGDILFL-HMSKDPIRTG 639
Q+++ GMIV+SAL+IWKGL+V TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR G
Sbjct: 30 QVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVG 89
Query: 638 EIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIM 459
EIVVF ++GREIPIVHRV+K+HE+Q+ + LTKGDNN DDR LY GQ WL++ ++
Sbjct: 90 EIVVFRIEGREIPIVHRVLKIHEKQN-GHIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVV 148
Query: 458 GRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
GRA G++PY+G VTI+M + P KY ++ LGL V+ ++
Sbjct: 149 GRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 188
>sptr|Q86JD4|Q86JD4 Hypothetical protein.
Length = 179
Score = 190 bits (482), Expect = 3e-47
Identities = 90/168 (53%), Positives = 128/168 (76%)
Frame = -3
Query: 842 SMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRGDILFLHM 663
S+ Q+ QI++ G+IV +AL+IWKGL++F+GSESP+VVVLSGSM P F RGD+L+L+M
Sbjct: 13 SIPKHQIAQQIVNFGLIVATALMIWKGLMIFSGSESPIVVVLSGSMIPAFFRGDLLYLNM 72
Query: 662 SKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDRLLYAHGQL 483
P R GEIVVF ++G+EIPIVHR++++HE++D DI TKGDNN DD LY+ GQ
Sbjct: 73 EDGPFRVGEIVVFKIEGKEIPIVHRILQIHEKED-GLYDIRTKGDNNNVDDVGLYSPGQR 131
Query: 482 WLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
WL + HI+GRA G+LP VG VTI+M + P +K+ L+ L + V+++++
Sbjct: 132 WLSRDHIIGRAKGFLPSVGMVTIVMHDYPQLKFFLVFVLAVFVLSTRE 179
>sptr|Q8ISG0|Q8ISG0 Signal peptidase type I.
Length = 180
Score = 165 bits (417), Expect = 1e-39
Identities = 71/174 (40%), Positives = 122/174 (70%), Gaps = 1/174 (0%)
Frame = -3
Query: 857 MESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRGDI 678
+ ++ S+++R V+ Q++++G+ ++ L+ W+ + V T E+ +VVVLSGSMEPG+ RGD+
Sbjct: 5 INTLLSLRVRDVIQQVVTVGLFLSIVLVGWRAVAVGTNCEASIVVVLSGSMEPGYYRGDV 64
Query: 677 LFLHMSKD-PIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDRLL 501
L LH + P+ G+I+V+ + G+EIPIVHRV ++H+R + + LTKGDNN DDR L
Sbjct: 65 LLLHHRPEYPVTVGDIIVYTLPGQEIPIVHRVHRIHQRSEDGKKFYLTKGDNNVNDDRFL 124
Query: 500 YAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
+ +G+ W+++ I+G+ Y+P +G++TI+ E IKYL +G +G ++T+ D
Sbjct: 125 FRNGREWVEEGMIIGKTYAYVPRIGYLTIMFNESKIIKYLALGLIGFFLLTTTD 178
>sptrnew|EAA27694|EAA27694 Hypothetical protein.
Length = 172
Score = 160 bits (405), Expect = 3e-38
Identities = 78/166 (46%), Positives = 121/166 (72%), Gaps = 2/166 (1%)
Frame = -3
Query: 830 RQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRGDILFLHMSKDP 651
RQ +Q+++ G+I+++A ++WKG+ V T S SP+VVVLSGSMEP F+RGD+LFL
Sbjct: 9 RQAAVQLMNFGLILSTAFMMWKGISVITDSPSPIVVVLSGSMEPAFQRGDLLFLWNRNVL 68
Query: 650 IRT--GEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDRLLYAHGQLWL 477
T GEIVV+NV G++IPIVHR+++ + A+ +LTKGDNN DD LYA GQ +L
Sbjct: 69 AETSVGEIVVYNVKGKDIPIVHRIVRKFGKGPEAK--LLTKGDNNVSDDTELYASGQDYL 126
Query: 476 QQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
++ I+G Y+P+VG+VTI+++E P++K +++G +GL+V+ ++
Sbjct: 127 VRNDIIGSVFAYIPFVGYVTILLSEHPWLKTVMLGLMGLVVVLQRE 172
>sptr|Q8IE14|Q8IE14 Signal peptidase, putative (EC 3.4.-).
Length = 184
Score = 152 bits (385), Expect = 6e-36
Identities = 74/160 (46%), Positives = 113/160 (70%)
Frame = -3
Query: 830 RQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRGDILFLHMSKDP 651
R L I+++ ++ +AL+IWK L+VFTG ESPVVVVLSGSMEPG+ RGD L L+
Sbjct: 23 RDGLSHILNVICLLLNALMIWKLLVVFTGCESPVVVVLSGSMEPGYYRGDTLALY-HPPK 81
Query: 650 IRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDRLLYAHGQLWLQQ 471
I G++VV+ ++GR+IPIVHR++ +H +D + +L+KGDNN DDR LY Q WL+
Sbjct: 82 IHAGDVVVYQINGRDIPIVHRILSLHTSKDN-KFHLLSKGDNNNIDDRGLYDPHQYWLEN 140
Query: 470 HHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVI 351
H++G +VGY PY+G +TI + E P +K+ ++ + ++++
Sbjct: 141 EHVLGLSVGYTPYIGILTIWINEYPVVKWAIVSIMLIMIL 180
>sw|P15367|SC11_YEAST Signal sequence processing protein SEC11 (EC
3.4.-.-).
Length = 167
Score = 141 bits (356), Expect = 1e-32
Identities = 71/161 (44%), Positives = 109/161 (67%), Gaps = 1/161 (0%)
Frame = -3
Query: 839 MQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRGDILFLHMS 660
M +R L +++++ + SA + W+GL + T S SP+VVVLSGSMEP F+RGDILFL
Sbjct: 1 MNLRFELQKLLNVCFLFASAYMFWQGLAIATNSASPIVVVLSGSMEPAFQRGDILFLWNR 60
Query: 659 KDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDRLLYAHGQLW 480
+ G++VV+ V+G++IPIVHRV++ H + +LTKGDNN G+D LYA+ +++
Sbjct: 61 NTFNQVGDVVVYEVEGKQIPIVHRVLRQHNNHADKQF-LLTKGDNNAGNDISLYANKKIY 119
Query: 479 L-QQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGL 360
L + I+G GY P +G++TI ++E + K+ L+G LGL
Sbjct: 120 LNKSKEIVGTVKGYFPQLGYITIWISENKYAKFALLGMLGL 160
>sptr|O74323|O74323 Signal sequence processing protein, peptidase.
Length = 189
Score = 136 bits (343), Expect = 4e-31
Identities = 75/189 (39%), Positives = 119/189 (62%), Gaps = 19/189 (10%)
Frame = -3
Query: 848 IRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRGDILFL 669
++ + RQ L QI++L ++++SA + +K L T ESPVVVVLS SMEP F+RGD+LFL
Sbjct: 1 MQKLSFRQGLAQILNLLLVLSSAYMGYKTLSFVTDCESPVVVVLSESMEPSFQRGDLLFL 60
Query: 668 H------------------MSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDI 543
+ P+ G+IVV+++ R IPIVHRV+K++E ++ + +
Sbjct: 61 DNRNPSFDEAKVPSVFEKIIYGSPVGIGDIVVYSLPDRPIPIVHRVVKLYESEN--QTHL 118
Query: 542 LTKGDNNFGDDRLLYAHGQLWL-QQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGAL 366
+TKGDNN DD ++ +L +++HI+G GY PY+G +TI +T+ P +KY+++G L
Sbjct: 119 ITKGDNNKIDDVAMFPKSINYLDRENHILGVVRGYFPYLGMITIWLTDYPILKYIMLGGL 178
Query: 365 GLLVITSKD 339
GLL + K+
Sbjct: 179 GLLTLIQKE 187
>sptr|Q8BM48|Q8BM48 Microsomal signal peptidase 21 kDa subunit.
Length = 116
Score = 135 bits (339), Expect = 1e-30
Identities = 67/100 (67%), Positives = 81/100 (81%), Gaps = 1/100 (1%)
Frame = -3
Query: 863 DTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRG 684
D +R M RQ+ Q+++ MIV+SAL+IWKGLIV TGSESP+VVVLSGSMEP F RG
Sbjct: 17 DIFGDLRKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESPIVVVLSGSMEPAFHRG 76
Query: 683 DILFL-HMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHER 567
D+LFL + +DPIR GEIVVF V+GR+IPIVHRVIKVHE+
Sbjct: 77 DLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK 116
>sptr|Q9BDH8|Q9BDH8 Signal peptidase 18 subunit (Fragment).
Length = 88
Score = 128 bits (322), Expect = 1e-28
Identities = 61/88 (69%), Positives = 77/88 (87%), Gaps = 1/88 (1%)
Frame = -3
Query: 827 QVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRGDILFL-HMSKDP 651
Q+ Q+++ GMIV+SAL+IWKGL+V TGSESP+VVVLSGSMEP F RGD+LFL + +DP
Sbjct: 1 QLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRGDLLFLTNRVEDP 60
Query: 650 IRTGEIVVFNVDGREIPIVHRVIKVHER 567
IR GEIVVF ++GREIPIVHRV+K+HE+
Sbjct: 61 IRVGEIVVFRIEGREIPIVHRVLKIHEK 88
>sptr|Q8ISF9|Q8ISF9 Signal peptidase type I (Fragment).
Length = 126
Score = 126 bits (317), Expect = 4e-28
Identities = 54/124 (43%), Positives = 86/124 (69%), Gaps = 1/124 (0%)
Frame = -3
Query: 707 MEPGFKRGDILFLHMSKD-PIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKG 531
MEPG+ RGD+L LH + P+ G+I+V+ + G+EIPIVHRV ++H+R + + LTKG
Sbjct: 1 MEPGYYRGDVLLLHHRPEYPVTVGDIIVYTLPGQEIPIVHRVHRIHQRSEDGKKSYLTKG 60
Query: 530 DNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVI 351
DNN DDR L+ +G+ W+++ I+G+ Y+P +G++TI+ E IKYL +G +G ++
Sbjct: 61 DNNVNDDRFLFRNGREWVEEGMIIGKTYAYVPRIGYLTIMFNESKIIKYLALGLIGFFLL 120
Query: 350 TSKD 339
T+ D
Sbjct: 121 TTTD 124
>sptr|Q8SSG0|Q8SSG0 Signal peptidase 18kDa subunit.
Length = 175
Score = 119 bits (299), Expect = 5e-26
Identities = 69/173 (39%), Positives = 103/173 (59%)
Frame = -3
Query: 857 MESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRGDI 678
++ ++ M IRQ L+Q ++ V +IWK V ++SP+VVVLS SM PGF+RGDI
Sbjct: 11 IKMLKRMSIRQKLIQFVNAAYSVMGTYMIWKMFSVLLNNDSPIVVVLSESMSPGFERGDI 70
Query: 677 LFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDRLLY 498
L+L +KD G++ VF GREIP VHR IK + LTKGDNN DD LY
Sbjct: 71 LWL-ANKD-FSVGDMTVFKF-GREIPCVHRCIKQFGGR------YLTKGDNNLNDDVSLY 121
Query: 497 AHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
G+ +L + I VGY+PY G + + + P +K++++ +GL V+ +++
Sbjct: 122 PRGRNYLTRDEIKSIVVGYVPYFGLINLWINTIPGMKFVILAGVGLSVLFTRE 174
>sptrnew|EAA40213|EAA40213 GLP_70_17657_16998.
Length = 219
Score = 89.7 bits (221), Expect = 6e-17
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 40/214 (18%)
Frame = -3
Query: 860 TMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRGD 681
T++ +RS+ + VL I+ + + +A + W L +F ++ P +VVL+GSM PGF RGD
Sbjct: 5 TLQRVRSLSVFDVLYYILKFVLSICTAYMHWNLLKLFLNNDMPGIVVLTGSMVPGFMRGD 64
Query: 680 ILFLHMSKD--PIRTGEIVVFNVDGREIPIVHRV------------------------IK 579
I + + I G+IV +++ R IPI HRV +
Sbjct: 65 ISAIKSTNHNLGIEVGDIVGYSLMHRAIPISHRVTERRVIIDNDFPCDVNSTVVDATGVV 124
Query: 578 VHERQDT--------------AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGY 441
+H + + +TKGD N D LY G+++L+ + ++G+ +
Sbjct: 125 LHHGPSSIAKAANPPALPSPCRRLAFITKGDANKVKDTFLYTTGRVYLEPYELVGKMLIN 184
Query: 440 LPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
LP +G++TI++ E + K LL G + L+ I+ ++
Sbjct: 185 LPGLGYMTILLQEHKWAKVLLFGMIILMAISGRE 218
>sptrnew|EAA16263|EAA16263 Signal peptidase 18 subunit-related
(Fragment).
Length = 160
Score = 72.8 bits (177), Expect = 8e-12
Identities = 36/75 (48%), Positives = 54/75 (72%)
Frame = -3
Query: 830 RQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRGDILFLHMSKDP 651
R + I+++ ++ +A +IWK L+V TG ESP+VVVLSGSMEPG+ RGD L L+ +
Sbjct: 80 RDSISHILNVICLLLNAFMIWKLLVVATGCESPIVVVLSGSMEPGYYRGDTLALY-NPPI 138
Query: 650 IRTGEIVVFNVDGRE 606
I G++VV+ ++GRE
Sbjct: 139 IHAGDVVVYQINGRE 153
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 853,835,840
Number of Sequences: 1272877
Number of extensions: 19809451
Number of successful extensions: 55226
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 52441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55131
length of database: 406,886,216
effective HSP length: 123
effective length of database: 250,322,345
effective search space used: 55070915900
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)