BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2576652.2.4
(870 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptr|Q8H2I4|Q8H2I4 Putative signal peptidase subunit. 250 2e-65
sptr|Q9SSR2|Q9SSR2 F6D8.18 protein (Putative signal peptidase su... 249 3e-65
sptr|Q9LW08|Q9LW08 Signal sequence processing protein, peptidase... 219 3e-56
sptrnew|EAA08439|EAA08439 AgCP3056 (Fragment). 161 1e-38
sptrnew|EAA02035|EAA02035 AgCP7174 (Fragment). 161 1e-38
sw|Q9WTR7|SPC3_RAT Microsomal signal peptidase 21 kDa subunit (E... 160 2e-38
sw|Q9D8V7|SPC3_MOUSE Microsomal signal peptidase 21 kDa subunit ... 160 3e-38
sw|Q9BY50|SPC3_HUMAN Microsomal signal peptidase 21 kDa subunit ... 160 3e-38
sw|P13679|SPC3_CANFA Microsomal signal peptidase 21 kDa subunit ... 160 3e-38
sptrnew|AAH37187|AAH37187 RIKEN cDNA 1810029G24. 160 3e-38
sptrnew|AAH10484|AAH10484 Signal peptidase complex. 158 8e-38
sw|Q9R0P6|SPC4_MOUSE Microsomal signal peptidase 18 kDa subunit ... 158 8e-38
sptrnew|AAP97204|AAP97204 Signal peptidase complex SPC-18. 156 3e-37
sw|P42667|SPC4_RAT Microsomal signal peptidase 18 kDa subunit (E... 156 3e-37
sw|P21378|SPC4_HUMAN Microsomal signal peptidase 18 kDa subunit ... 156 3e-37
sptrnew|AAH54167|AAH54167 Hypothetical protein. 155 7e-37
sptr|O97066|O97066 Hypothetical BCDNA:GM04682 protein (RH08585p). 155 9e-37
sptr|Q9N3D0|Q9N3D0 Hypothetical 20.6 kDa protein. 153 3e-36
sptr|Q86JD4|Q86JD4 Hypothetical protein. 149 5e-35
sptr|Q8ISG0|Q8ISG0 Signal peptidase type I. 140 3e-32
sptrnew|EAA27694|EAA27694 Hypothetical protein. 130 2e-29
sptr|Q8ISF9|Q8ISF9 Signal peptidase type I (Fragment). 127 2e-28
sptr|Q8IE14|Q8IE14 Signal peptidase, putative (EC 3.4.-). 126 4e-28
sw|P15367|SC11_YEAST Signal sequence processing protein SEC11 (E... 119 4e-26
sptr|O74323|O74323 Signal sequence processing protein, peptidase. 117 3e-25
sptr|Q8SSG0|Q8SSG0 Signal peptidase 18kDa subunit. 98 1e-19
sptr|Q8BM48|Q8BM48 Microsomal signal peptidase 21 kDa subunit. 89 1e-16
sptr|Q9BDH8|Q9BDH8 Signal peptidase 18 subunit (Fragment). 88 1e-16
sptrnew|EAA40213|EAA40213 GLP_70_17657_16998. 70 3e-11
sptr|Q8H041|Q8H041 Hypothetical protein. 70 4e-11
>sptr|Q8H2I4|Q8H2I4 Putative signal peptidase subunit.
Length = 216
Score = 250 bits (638), Expect = 2e-65
Identities = 125/151 (82%), Positives = 132/151 (87%), Gaps = 18/151 (11%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFN+DGREIPIVHRVIKVHERQ++
Sbjct: 66 SPVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQES 125
Query: 183 AEVDILTK------------------GDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPY 308
AEVDILTK GDNNFGDDRLLYAHGQLWLQQHHIMGRAVG+LPY
Sbjct: 126 AEVDILTKGIHHFLFEHHKFLTSGYSGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGFLPY 185
Query: 309 VGWITIIMTEKPFIKYLLIGALGLLVITSKD 401
VGW+TIIMTEKP IKYLLIGALGLLVITSK+
Sbjct: 186 VGWVTIIMTEKPIIKYLLIGALGLLVITSKE 216
>sptr|Q9SSR2|Q9SSR2 F6D8.18 protein (Putative signal peptidase
subunit) (Signal peptidase subunit, putative).
Length = 180
Score = 249 bits (636), Expect = 3e-65
Identities = 117/133 (87%), Positives = 128/133 (96%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLSGSMEPGFKRGDILFLHMSKDPIR GEIVVFN+DGR+IPIVHRVIKVHER++T
Sbjct: 48 SPVVVVLSGSMEPGFKRGDILFLHMSKDPIRAGEIVVFNVDGRDIPIVHRVIKVHERENT 107
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLL 362
EVD+LTKGDNN+GDDRLLYA GQLWL +HHIMGRAVG+LPYVGW+TIIMTEKP IKY+L
Sbjct: 108 GEVDVLTKGDNNYGDDRLLYAEGQLWLHRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYIL 167
Query: 363 IGALGLLVITSKD 401
IGALGLLVITSKD
Sbjct: 168 IGALGLLVITSKD 180
>sptr|Q9LW08|Q9LW08 Signal sequence processing protein,
peptidase-like protein.
Length = 180
Score = 219 bits (559), Expect = 3e-56
Identities = 107/133 (80%), Positives = 118/133 (88%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLS SMEPGF+RGDILFL M+ +PIR GEIVVF++DGREIPIVHR IKVHER DT
Sbjct: 48 SPVVVVLSESMEPGFQRGDILFLRMTDEPIRAGEIVVFSVDGREIPIVHRAIKVHERGDT 107
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLL 362
VD+LTKGDNN DD LYA GQLWL +HHIMGRAVG+LPYVGW+TIIMTEKP IKY+L
Sbjct: 108 KAVDVLTKGDNNDIDDIGLYAEGQLWLHRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYIL 167
Query: 363 IGALGLLVITSKD 401
IGALGLLVITSKD
Sbjct: 168 IGALGLLVITSKD 180
>sptrnew|EAA08439|EAA08439 AgCP3056 (Fragment).
Length = 193
Score = 161 bits (407), Expect = 1e-38
Identities = 81/133 (60%), Positives = 100/133 (75%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+P+VVVLSGSMEP F RGD+LFL +P+R GEIVVF I+GR+IPIVHRVIK+HE+ +
Sbjct: 62 SPIVVVLSGSMEPAFHRGDLLFLTNQDEPVRVGEIVVFKIEGRDIPIVHRVIKLHEKSN- 120
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLL 362
V LTKGDNN DDR LYA GQLWL + I+GRA G+LPYVG ITI M E P +KY +
Sbjct: 121 GTVKFLTKGDNNSVDDRGLYAPGQLWLTKKDIVGRARGFLPYVGMITIYMNEYPKLKYGI 180
Query: 363 IGALGLLVITSKD 401
+G L L V+ ++
Sbjct: 181 LGLLALYVLVHRE 193
>sptrnew|EAA02035|EAA02035 AgCP7174 (Fragment).
Length = 210
Score = 161 bits (407), Expect = 1e-38
Identities = 81/133 (60%), Positives = 100/133 (75%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+P+VVVLSGSMEP F RGD+LFL +P+R GEIVVF I+GR+IPIVHRVIK+HE+ +
Sbjct: 79 SPIVVVLSGSMEPAFHRGDLLFLTNQDEPVRVGEIVVFKIEGRDIPIVHRVIKLHEKSN- 137
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLL 362
V LTKGDNN DDR LYA GQLWL + I+GRA G+LPYVG ITI M E P +KY +
Sbjct: 138 GTVKFLTKGDNNSVDDRGLYAPGQLWLTKKDIVGRARGFLPYVGMITIYMNEYPKLKYGI 197
Query: 363 IGALGLLVITSKD 401
+G L L V+ ++
Sbjct: 198 LGLLALYVLVHRE 210
>sw|Q9WTR7|SPC3_RAT Microsomal signal peptidase 21 kDa subunit (EC
3.4.-.-) (SPase 21 kDa subunit) (SPC21).
Length = 191
Score = 160 bits (405), Expect = 2e-38
Identities = 78/134 (58%), Positives = 101/134 (75%), Gaps = 1/134 (0%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFL-HMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQD 179
+P+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF ++GR+IPIVHRVIKVHE+ D
Sbjct: 58 SPIVVVLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-D 116
Query: 180 TAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYL 359
++ LTKGDNN DDR LY GQ WL++ ++GRA G+LPYVG +TIIM + P KY
Sbjct: 117 NGDIKFLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFKYA 176
Query: 360 LIGALGLLVITSKD 401
L+ +G V+ ++
Sbjct: 177 LVAVMGAYVLLKRE 190
>sw|Q9D8V7|SPC3_MOUSE Microsomal signal peptidase 21 kDa subunit (EC
3.4.-.-) (SPase 21 kDa subunit) (SPC21).
Length = 191
Score = 160 bits (404), Expect = 3e-38
Identities = 78/134 (58%), Positives = 101/134 (75%), Gaps = 1/134 (0%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFL-HMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQD 179
+P+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF ++GR+IPIVHRVIKVHE+ D
Sbjct: 58 SPIVVVLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-D 116
Query: 180 TAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYL 359
++ LTKGDNN DDR LY GQ WL++ ++GRA G+LPYVG +TIIM + P KY
Sbjct: 117 NGDIKFLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFKYA 176
Query: 360 LIGALGLLVITSKD 401
L+ +G V+ ++
Sbjct: 177 LLAVMGAYVLLKRE 190
>sw|Q9BY50|SPC3_HUMAN Microsomal signal peptidase 21 kDa subunit (EC
3.4.-.-) (SPase 21 kDa subunit) (SPC21).
Length = 191
Score = 160 bits (404), Expect = 3e-38
Identities = 78/134 (58%), Positives = 101/134 (75%), Gaps = 1/134 (0%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFL-HMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQD 179
+P+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF ++GR+IPIVHRVIKVHE+ D
Sbjct: 58 SPIVVVLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-D 116
Query: 180 TAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYL 359
++ LTKGDNN DDR LY GQ WL++ ++GRA G+LPYVG +TIIM + P KY
Sbjct: 117 NGDIKFLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFKYA 176
Query: 360 LIGALGLLVITSKD 401
L+ +G V+ ++
Sbjct: 177 LLAVMGAYVLLKRE 190
>sw|P13679|SPC3_CANFA Microsomal signal peptidase 21 kDa subunit (EC
3.4.-.-) (SPase 21 kDa subunit) (SPC21).
Length = 191
Score = 160 bits (404), Expect = 3e-38
Identities = 78/134 (58%), Positives = 101/134 (75%), Gaps = 1/134 (0%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFL-HMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQD 179
+P+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF ++GR+IPIVHRVIKVHE+ D
Sbjct: 58 SPIVVVLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-D 116
Query: 180 TAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYL 359
++ LTKGDNN DDR LY GQ WL++ ++GRA G+LPYVG +TIIM + P KY
Sbjct: 117 NGDIKFLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFKYA 176
Query: 360 LIGALGLLVITSKD 401
L+ +G V+ ++
Sbjct: 177 LLAVMGAYVLLKRE 190
>sptrnew|AAH37187|AAH37187 RIKEN cDNA 1810029G24.
Length = 192
Score = 160 bits (404), Expect = 3e-38
Identities = 78/134 (58%), Positives = 101/134 (75%), Gaps = 1/134 (0%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFL-HMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQD 179
+P+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF ++GR+IPIVHRVIKVHE+ D
Sbjct: 59 SPIVVVLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-D 117
Query: 180 TAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYL 359
++ LTKGDNN DDR LY GQ WL++ ++GRA G+LPYVG +TIIM + P KY
Sbjct: 118 NGDIKFLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFKYA 177
Query: 360 LIGALGLLVITSKD 401
L+ +G V+ ++
Sbjct: 178 LLAVMGAYVLLKRE 191
>sptrnew|AAH10484|AAH10484 Signal peptidase complex.
Length = 179
Score = 158 bits (400), Expect = 8e-38
Identities = 77/134 (57%), Positives = 102/134 (76%), Gaps = 1/134 (0%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFL-HMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQD 179
+P+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF I+GREIPIVHRV+K+HE+QD
Sbjct: 47 SPIVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQD 106
Query: 180 TAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYL 359
+ LTKGDNN DDR LY GQ WL++ ++GRA G++PY+G +TI+M + P KY
Sbjct: 107 -GHIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYA 165
Query: 360 LIGALGLLVITSKD 401
++ LGL V+ ++
Sbjct: 166 VLFLLGLFVLVHRE 179
>sw|Q9R0P6|SPC4_MOUSE Microsomal signal peptidase 18 kDa subunit (EC
3.4.-.-) (SPase 18 kDa subunit) (SPC18) (Endopeptidase
SP18).
Length = 179
Score = 158 bits (400), Expect = 8e-38
Identities = 77/134 (57%), Positives = 102/134 (76%), Gaps = 1/134 (0%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFL-HMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQD 179
+P+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF I+GREIPIVHRV+K+HE+QD
Sbjct: 47 SPIVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQD 106
Query: 180 TAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYL 359
+ LTKGDNN DDR LY GQ WL++ ++GRA G++PY+G +TI+M + P KY
Sbjct: 107 -GHIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYA 165
Query: 360 LIGALGLLVITSKD 401
++ LGL V+ ++
Sbjct: 166 VLFLLGLFVLVHRE 179
>sptrnew|AAP97204|AAP97204 Signal peptidase complex SPC-18.
Length = 188
Score = 156 bits (395), Expect = 3e-37
Identities = 76/134 (56%), Positives = 102/134 (76%), Gaps = 1/134 (0%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFL-HMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQD 179
+P+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF I+GREIPIVHRV+K+HE+Q+
Sbjct: 56 SPIVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQN 115
Query: 180 TAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYL 359
+ LTKGDNN DDR LY GQ WL++ ++GRA G++PY+G +TI+M + P KY
Sbjct: 116 -GHIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYA 174
Query: 360 LIGALGLLVITSKD 401
++ LGL V+ ++
Sbjct: 175 VLFLLGLFVLVHRE 188
>sw|P42667|SPC4_RAT Microsomal signal peptidase 18 kDa subunit (EC
3.4.-.-) (SPase 18 kDa subunit) (SPC18) (Endopeptidase
SP18).
Length = 179
Score = 156 bits (395), Expect = 3e-37
Identities = 76/134 (56%), Positives = 101/134 (75%), Gaps = 1/134 (0%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFL-HMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQD 179
+P+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF I+GREIPIVHRV+K+HE+QD
Sbjct: 47 SPIVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQD 106
Query: 180 TAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYL 359
+ LTKGDNN DDR LY GQ WL++ ++GRA G++PY+G +TI+M + P Y
Sbjct: 107 -GHIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFSYA 165
Query: 360 LIGALGLLVITSKD 401
++ LGL V+ ++
Sbjct: 166 VLFLLGLFVLVHRE 179
>sw|P21378|SPC4_HUMAN Microsomal signal peptidase 18 kDa subunit (EC
3.4.-.-) (SPase 18 kDa subunit) (SPC18) (Endopeptidase
SP18).
Length = 179
Score = 156 bits (395), Expect = 3e-37
Identities = 76/134 (56%), Positives = 102/134 (76%), Gaps = 1/134 (0%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFL-HMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQD 179
+P+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF I+GREIPIVHRV+K+HE+Q+
Sbjct: 47 SPIVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQN 106
Query: 180 TAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYL 359
+ LTKGDNN DDR LY GQ WL++ ++GRA G++PY+G +TI+M + P KY
Sbjct: 107 -GHIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYA 165
Query: 360 LIGALGLLVITSKD 401
++ LGL V+ ++
Sbjct: 166 VLFLLGLFVLVHRE 179
>sptrnew|AAH54167|AAH54167 Hypothetical protein.
Length = 179
Score = 155 bits (392), Expect = 7e-37
Identities = 75/134 (55%), Positives = 102/134 (76%), Gaps = 1/134 (0%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFL-HMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQD 179
+P+VVVLSGSMEP F RGD+LFL + DPIR GEIVVF I+GREIPIVHRV+K+HE+++
Sbjct: 47 SPIVVVLSGSMEPAFHRGDLLFLTNRVDDPIRVGEIVVFRIEGREIPIVHRVLKIHEKEN 106
Query: 180 TAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYL 359
++ LTKGDNN DDR LY GQ WL++ ++GRA G++PY+G +TI+M + P KY
Sbjct: 107 -GDIKFLTKGDNNAVDDRGLYKQGQNWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYA 165
Query: 360 LIGALGLLVITSKD 401
++ LGL V+ ++
Sbjct: 166 VLFLLGLFVLVHRE 179
>sptr|O97066|O97066 Hypothetical BCDNA:GM04682 protein (RH08585p).
Length = 185
Score = 155 bits (391), Expect = 9e-37
Identities = 77/134 (57%), Positives = 101/134 (75%), Gaps = 1/134 (0%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFL-HMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQD 179
+P+VVVLSGSMEP F RGD+LFL + ++P+R GEIVVF ++GR+IPIVHRVIK+HE++D
Sbjct: 53 SPIVVVLSGSMEPAFHRGDLLFLTNYKEEPVRVGEIVVFKVEGRDIPIVHRVIKLHEKED 112
Query: 180 TAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYL 359
V LTKGDNN DDR LYA QLWL + I+GRA G+LPYVG ITI M E P +K+
Sbjct: 113 -GSVKFLTKGDNNNVDDRGLYAPNQLWLTKKDIVGRARGFLPYVGIITIFMNEYPKVKWA 171
Query: 360 LIGALGLLVITSKD 401
++ L + V+ ++
Sbjct: 172 ILSILAIFVLLHRE 185
>sptr|Q9N3D0|Q9N3D0 Hypothetical 20.6 kDa protein.
Length = 183
Score = 153 bits (387), Expect = 3e-36
Identities = 79/134 (58%), Positives = 97/134 (72%), Gaps = 1/134 (0%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMS-KDPIRTGEIVVFNIDGREIPIVHRVIKVHERQD 179
+PVVVVLSGSMEP F RGD+L L +DP+R G+I VF ++GREIPIVHRVIKVHE+
Sbjct: 50 SPVVVVLSGSMEPAFYRGDLLLLTNDLEDPVRVGDITVFKVEGREIPIVHRVIKVHEKS- 108
Query: 180 TAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYL 359
ILTKGDNN DDR LYA GQLWL + ++GR G LPYVG +TIIM + P +KY
Sbjct: 109 ADNTKILTKGDNNQVDDRGLYAPGQLWLSRTDVVGRTKGLLPYVGMVTIIMNDYPKLKYA 168
Query: 360 LIGALGLLVITSKD 401
++ LGL V+ K+
Sbjct: 169 VLAFLGLFVLLHKE 182
>sptr|Q86JD4|Q86JD4 Hypothetical protein.
Length = 179
Score = 149 bits (376), Expect = 5e-35
Identities = 71/133 (53%), Positives = 100/133 (75%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+P+VVVLSGSM P F RGD+L+L+M P R GEIVVF I+G+EIPIVHR++++HE++D
Sbjct: 48 SPIVVVLSGSMIPAFFRGDLLYLNMEDGPFRVGEIVVFKIEGKEIPIVHRILQIHEKED- 106
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLL 362
DI TKGDNN DD LY+ GQ WL + HI+GRA G+LP VG +TI+M + P +K+ L
Sbjct: 107 GLYDIRTKGDNNNVDDVGLYSPGQRWLSRDHIIGRAKGFLPSVGMVTIVMHDYPQLKFFL 166
Query: 363 IGALGLLVITSKD 401
+ L + V+++++
Sbjct: 167 VFVLAVFVLSTRE 179
>sptr|Q8ISG0|Q8ISG0 Signal peptidase type I.
Length = 180
Score = 140 bits (352), Expect = 3e-32
Identities = 62/134 (46%), Positives = 95/134 (70%), Gaps = 1/134 (0%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKD-PIRTGEIVVFNIDGREIPIVHRVIKVHERQD 179
A +VVVLSGSMEPG+ RGD+L LH + P+ G+I+V+ + G+EIPIVHRV ++H+R +
Sbjct: 45 ASIVVVLSGSMEPGYYRGDVLLLHHRPEYPVTVGDIIVYTLPGQEIPIVHRVHRIHQRSE 104
Query: 180 TAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYL 359
+ LTKGDNN DDR L+ +G+ W+++ I+G+ Y+P +G++TI+ E IKYL
Sbjct: 105 DGKKFYLTKGDNNVNDDRFLFRNGREWVEEGMIIGKTYAYVPRIGYLTIMFNESKIIKYL 164
Query: 360 LIGALGLLVITSKD 401
+G +G ++T+ D
Sbjct: 165 ALGLIGFFLLTTTD 178
>sptrnew|EAA27694|EAA27694 Hypothetical protein.
Length = 172
Score = 130 bits (327), Expect = 2e-29
Identities = 63/135 (46%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRT--GEIVVFNIDGREIPIVHRVIKVHERQ 176
+P+VVVLSGSMEP F+RGD+LFL T GEIVV+N+ G++IPIVHR+++ +
Sbjct: 40 SPIVVVLSGSMEPAFQRGDLLFLWNRNVLAETSVGEIVVYNVKGKDIPIVHRIVRKFGKG 99
Query: 177 DTAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKY 356
A+ +LTKGDNN DD LYA GQ +L ++ I+G Y+P+VG++TI+++E P++K
Sbjct: 100 PEAK--LLTKGDNNVSDDTELYASGQDYLVRNDIIGSVFAYIPFVGYVTILLSEHPWLKT 157
Query: 357 LLIGALGLLVITSKD 401
+++G +GL+V+ ++
Sbjct: 158 VMLGLMGLVVVLQRE 172
>sptr|Q8ISF9|Q8ISF9 Signal peptidase type I (Fragment).
Length = 126
Score = 127 bits (319), Expect = 2e-28
Identities = 54/124 (43%), Positives = 86/124 (69%), Gaps = 1/124 (0%)
Frame = +3
Query: 33 MEPGFKRGDILFLHMSKD-PIRTGEIVVFNIDGREIPIVHRVIKVHERQDTAEVDILTKG 209
MEPG+ RGD+L LH + P+ G+I+V+ + G+EIPIVHRV ++H+R + + LTKG
Sbjct: 1 MEPGYYRGDVLLLHHRPEYPVTVGDIIVYTLPGQEIPIVHRVHRIHQRSEDGKKSYLTKG 60
Query: 210 DNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLLIGALGLLVI 389
DNN DDR L+ +G+ W+++ I+G+ Y+P +G++TI+ E IKYL +G +G ++
Sbjct: 61 DNNVNDDRFLFRNGREWVEEGMIIGKTYAYVPRIGYLTIMFNESKIIKYLALGLIGFFLL 120
Query: 390 TSKD 401
T+ D
Sbjct: 121 TTTD 124
>sptr|Q8IE14|Q8IE14 Signal peptidase, putative (EC 3.4.-).
Length = 184
Score = 126 bits (316), Expect = 4e-28
Identities = 60/129 (46%), Positives = 91/129 (70%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+PVVVVLSGSMEPG+ RGD L L+ I G++VV+ I+GR+IPIVHR++ +H +D
Sbjct: 54 SPVVVVLSGSMEPGYYRGDTLALY-HPPKIHAGDVVVYQINGRDIPIVHRILSLHTSKDN 112
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLL 362
+ +L+KGDNN DDR LY Q WL+ H++G +VGY PY+G +TI + E P +K+ +
Sbjct: 113 -KFHLLSKGDNNNIDDRGLYDPHQYWLENEHVLGLSVGYTPYIGILTIWINEYPVVKWAI 171
Query: 363 IGALGLLVI 389
+ + ++++
Sbjct: 172 VSIMLIMIL 180
>sw|P15367|SC11_YEAST Signal sequence processing protein SEC11 (EC
3.4.-.-).
Length = 167
Score = 119 bits (299), Expect = 4e-26
Identities = 60/127 (47%), Positives = 89/127 (70%), Gaps = 1/127 (0%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+P+VVVLSGSMEP F+RGDILFL + G++VV+ ++G++IPIVHRV++ H
Sbjct: 35 SPIVVVLSGSMEPAFQRGDILFLWNRNTFNQVGDVVVYEVEGKQIPIVHRVLRQHNNHAD 94
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWL-QQHHIMGRAVGYLPYVGWITIIMTEKPFIKYL 359
+ +LTKGDNN G+D LYA+ +++L + I+G GY P +G+ITI ++E + K+
Sbjct: 95 KQF-LLTKGDNNAGNDISLYANKKIYLNKSKEIVGTVKGYFPQLGYITIWISENKYAKFA 153
Query: 360 LIGALGL 380
L+G LGL
Sbjct: 154 LLGMLGL 160
>sptr|O74323|O74323 Signal sequence processing protein, peptidase.
Length = 189
Score = 117 bits (292), Expect = 3e-25
Identities = 63/152 (41%), Positives = 95/152 (62%), Gaps = 19/152 (12%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSK------------------DPIRTGEIVVFNIDG 128
+PVVVVLS SMEP F+RGD+LFL P+ G+IVV+++
Sbjct: 38 SPVVVVLSESMEPSFQRGDLLFLDNRNPSFDEAKVPSVFEKIIYGSPVGIGDIVVYSLPD 97
Query: 129 REIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDRLLYAHGQLWL-QQHHIMGRAVGYLP 305
R IPIVHRV+K++E ++ + ++TKGDNN DD ++ +L +++HI+G GY P
Sbjct: 98 RPIPIVHRVVKLYESEN--QTHLITKGDNNKIDDVAMFPKSINYLDRENHILGVVRGYFP 155
Query: 306 YVGWITIIMTEKPFIKYLLIGALGLLVITSKD 401
Y+G ITI +T+ P +KY+++G LGLL + K+
Sbjct: 156 YLGMITIWLTDYPILKYIMLGGLGLLTLIQKE 187
>sptr|Q8SSG0|Q8SSG0 Signal peptidase 18kDa subunit.
Length = 175
Score = 98.2 bits (243), Expect = 1e-19
Identities = 58/133 (43%), Positives = 82/133 (61%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHERQDT 182
+P+VVVLS SM PGF+RGDIL+L +KD G++ VF GREIP VHR IK +
Sbjct: 51 SPIVVVLSESMSPGFERGDILWL-ANKD-FSVGDMTVFKF-GREIPCVHRCIKQFGGR-- 105
Query: 183 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLL 362
LTKGDNN DD LY G+ +L + I VGY+PY G I + + P +K+++
Sbjct: 106 ----YLTKGDNNLNDDVSLYPRGRNYLTRDEIKSIVVGYVPYFGLINLWINTIPGMKFVI 161
Query: 363 IGALGLLVITSKD 401
+ +GL V+ +++
Sbjct: 162 LAGVGLSVLFTRE 174
>sptr|Q8BM48|Q8BM48 Microsomal signal peptidase 21 kDa subunit.
Length = 116
Score = 88.6 bits (218), Expect = 1e-16
Identities = 42/58 (72%), Positives = 51/58 (87%), Gaps = 1/58 (1%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFL-HMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHER 173
+P+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF ++GR+IPIVHRVIKVHE+
Sbjct: 59 SPIVVVLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK 116
>sptr|Q9BDH8|Q9BDH8 Signal peptidase 18 subunit (Fragment).
Length = 88
Score = 88.2 bits (217), Expect = 1e-16
Identities = 42/58 (72%), Positives = 51/58 (87%), Gaps = 1/58 (1%)
Frame = +3
Query: 3 APVVVVLSGSMEPGFKRGDILFL-HMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHER 173
+P+VVVLSGSMEP F RGD+LFL + +DPIR GEIVVF I+GREIPIVHRV+K+HE+
Sbjct: 31 SPIVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEK 88
>sptrnew|EAA40213|EAA40213 GLP_70_17657_16998.
Length = 219
Score = 70.5 bits (171), Expect = 3e-11
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 40/172 (23%)
Frame = +3
Query: 6 PVVVVLSGSMEPGFKRGDILFLHMSKD--PIRTGEIVVFNIDGREIPIVHRV-------- 155
P +VVL+GSM PGF RGDI + + I G+IV +++ R IPI HRV
Sbjct: 47 PGIVVLTGSMVPGFMRGDISAIKSTNHNLGIEVGDIVGYSLMHRAIPISHRVTERRVIID 106
Query: 156 ----------------IKVHERQDT--------------AEVDILTKGDNNFGDDRLLYA 245
+ +H + + +TKGD N D LY
Sbjct: 107 NDFPCDVNSTVVDATGVVLHHGPSSIAKAANPPALPSPCRRLAFITKGDANKVKDTFLYT 166
Query: 246 HGQLWLQQHHIMGRAVGYLPYVGWITIIMTEKPFIKYLLIGALGLLVITSKD 401
G+++L+ + ++G+ + LP +G++TI++ E + K LL G + L+ I+ ++
Sbjct: 167 TGRVYLEPYELVGKMLINLPGLGYMTILLQEHKWAKVLLFGMIILMAISGRE 218
>sptr|Q8H041|Q8H041 Hypothetical protein.
Length = 648
Score = 70.1 bits (170), Expect = 4e-11
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 6/73 (8%)
Frame = +3
Query: 15 VVLSGSMEPGFKRGDILFLHMSK------DPIRTGEIVVFNIDGREIPIVHRVIKVHERQ 176
VV+SGSMEPG +RGD+L + + D IR G+IV+F+ + +PIVHRVI++HER
Sbjct: 55 VVVSGSMEPGIRRGDMLIVRERRNDGDGDDNIRAGDIVLFSTELHPVPIVHRVIELHERH 114
Query: 177 DTAEVDILTKGDN 215
D +LTKG N
Sbjct: 115 DGGARQMLTKGAN 127
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 672,196,950
Number of Sequences: 1272877
Number of extensions: 14835875
Number of successful extensions: 29212
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29144
length of database: 406,886,216
effective HSP length: 121
effective length of database: 252,868,099
effective search space used: 42481840632
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)