BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493695.2.1
(570 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptrnew|BAC79504|BAC79504 Phytosulfokines 4. 48 7e-05
sw|Q9AR88|PSK4_ORYSA Phytosulfokines 4 precursor [Contains: Phyt... 48 7e-05
sptr|Q8LIS5|Q8LIS5 Putative phytosulfokines 4. 48 7e-05
sptr|Q8S5X1|Q8S5X1 Putative Phytosulfokines. 45 6e-04
sw|Q9FS10|PSK_ASPOF Phytosulfokines precursor [Contains: Phytosu... 44 0.001
sptr|Q84S30|Q84S30 Phytosulfokine peptide. 44 0.002
sptrnew|AAO50487|AAO50487 Hypothetical protein At2g22860. 43 0.003
sw|O81003|PSK2_ARATH Phytosulfokines 2 precursor (AtPSK2) [Conta... 43 0.003
sptr|Q8H0B9|Q8H0B9 Preprophytosulfokine. 42 0.005
sptrnew|AAP21304|AAP21304 At3g49780. 40 0.014
sw|Q9M2Y0|PSK3_ARATH Phytosulfokines 3 precursor (AtPSK3) [Conta... 40 0.014
sw|Q9FEB4|PSK5_ARATH Phytosulfokines 5 precursor (AtPSK5) [Conta... 40 0.024
sw|Q9LMY9|PSK1_ARATH Phytosulfokines 1 precursor (AtPSK1) [Conta... 39 0.032
sw|Q9SZG4|PSK4_ARATH Putative phytosulfokines 4 precursor (AtPSK... 38 0.070
sw|Q9FRF9|PSK3_ORYSA Phytosulfokines 3 precursor [Contains: Phyt... 37 0.12
sw|Q9AR89|PSK2_ORYSA Phytosulfokines 2 precursor [Contains: Phyt... 31 8.6
>sptrnew|BAC79504|BAC79504 Phytosulfokines 4.
Length = 83
Score = 48.1 bits (113), Expect = 7e-05
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +1
Query: 322 EDECMMRRTLAAHTDYIYTQQHH 390
E+EC+ RRTL AHTDYIYTQQHH
Sbjct: 60 EEECLARRTLTAHTDYIYTQQHH 82
>sw|Q9AR88|PSK4_ORYSA Phytosulfokines 4 precursor [Contains:
Phytosulfokine-alpha (PSK- alpha) (Phytosulfokine-a);
Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)].
Length = 83
Score = 48.1 bits (113), Expect = 7e-05
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +1
Query: 322 EDECMMRRTLAAHTDYIYTQQHH 390
E+EC+ RRTL AHTDYIYTQQHH
Sbjct: 60 EEECLARRTLTAHTDYIYTQQHH 82
>sptr|Q8LIS5|Q8LIS5 Putative phytosulfokines 4.
Length = 140
Score = 48.1 bits (113), Expect = 7e-05
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +1
Query: 322 EDECMMRRTLAAHTDYIYTQQHH 390
E+EC+ RRTL AHTDYIYTQQHH
Sbjct: 117 EEECLARRTLTAHTDYIYTQQHH 139
>sptr|Q8S5X1|Q8S5X1 Putative Phytosulfokines.
Length = 101
Score = 45.1 bits (105), Expect = 6e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 322 EDECMMRRTLAAHTDYIYTQQHH 390
E+EC+MRRTL AHTDYIYTQ +H
Sbjct: 78 EEECLMRRTLVAHTDYIYTQGNH 100
>sw|Q9FS10|PSK_ASPOF Phytosulfokines precursor [Contains:
Phytosulfokine-alpha (PSK- alpha) (Phytosulfokine-a);
Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)].
Length = 75
Score = 43.9 bits (102), Expect = 0.001
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +1
Query: 322 EDECMMRRTLAAHTDYIYTQQHH 390
E+EC+MRRTL AH DYIYTQ H+
Sbjct: 52 EEECLMRRTLTAHVDYIYTQDHN 74
>sptr|Q84S30|Q84S30 Phytosulfokine peptide.
Length = 102
Score = 43.5 bits (101), Expect = 0.002
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +1
Query: 319 DEDECMMRRTLAAHTDYIYTQQH 387
+E+EC+ RR+LAAHTDYIYTQ H
Sbjct: 77 EEEECLNRRSLAAHTDYIYTQHH 99
>sptrnew|AAO50487|AAO50487 Hypothetical protein At2g22860.
Length = 87
Score = 42.7 bits (99), Expect = 0.003
Identities = 16/22 (72%), Positives = 21/22 (95%)
Frame = +1
Query: 319 DEDECMMRRTLAAHTDYIYTQQ 384
D+++C+MRRTL AHTDYIYTQ+
Sbjct: 62 DDEDCLMRRTLVAHTDYIYTQK 83
>sw|O81003|PSK2_ARATH Phytosulfokines 2 precursor (AtPSK2)
[Contains: Phytosulfokine-alpha (PSK-alpha)
(Phytosulfokine-a); Phytosulfokine-beta (PSK-beta)
(Phytosulfokine-b)].
Length = 87
Score = 42.7 bits (99), Expect = 0.003
Identities = 16/22 (72%), Positives = 21/22 (95%)
Frame = +1
Query: 319 DEDECMMRRTLAAHTDYIYTQQ 384
D+++C+MRRTL AHTDYIYTQ+
Sbjct: 62 DDEDCLMRRTLVAHTDYIYTQK 83
>sptr|Q8H0B9|Q8H0B9 Preprophytosulfokine.
Length = 75
Score = 42.0 bits (97), Expect = 0.005
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +1
Query: 322 EDECMMRRTLAAHTDYIYTQQ 384
EDEC+MRRTL AH DYIYTQ+
Sbjct: 52 EDECLMRRTLVAHLDYIYTQK 72
>sptrnew|AAP21304|AAP21304 At3g49780.
Length = 79
Score = 40.4 bits (93), Expect = 0.014
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1
Query: 322 EDECMMRRTLAAHTDYIYTQQH 387
E+EC++RR+L HTDYIYTQ H
Sbjct: 56 EEECLIRRSLVLHTDYIYTQNH 77
>sw|Q9M2Y0|PSK3_ARATH Phytosulfokines 3 precursor (AtPSK3)
[Contains: Phytosulfokine-alpha (PSK-alpha)
(Phytosulfokine-a); Phytosulfokine-beta (PSK-beta)
(Phytosulfokine-b)].
Length = 79
Score = 40.4 bits (93), Expect = 0.014
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1
Query: 322 EDECMMRRTLAAHTDYIYTQQH 387
E+EC++RR+L HTDYIYTQ H
Sbjct: 56 EEECLIRRSLVLHTDYIYTQNH 77
>sw|Q9FEB4|PSK5_ARATH Phytosulfokines 5 precursor (AtPSK5)
[Contains: Phytosulfokine-alpha (PSK-alpha)
(Phytosulfokine-a); Phytosulfokine-beta (PSK-beta)
(Phytosulfokine-b)].
Length = 77
Score = 39.7 bits (91), Expect = 0.024
Identities = 17/24 (70%), Positives = 21/24 (87%), Gaps = 1/24 (4%)
Frame = +1
Query: 322 EDEC-MMRRTLAAHTDYIYTQQHH 390
E+EC ++RRTL AHTDYIYTQ H+
Sbjct: 53 EEECFLIRRTLVAHTDYIYTQNHN 76
>sw|Q9LMY9|PSK1_ARATH Phytosulfokines 1 precursor (AtPSK1)
[Contains: Phytosulfokine-alpha (PSK-alpha)
(Phytosulfokine-a); Phytosulfokine-beta (PSK-beta)
(Phytosulfokine-b)].
Length = 87
Score = 39.3 bits (90), Expect = 0.032
Identities = 14/22 (63%), Positives = 21/22 (95%)
Frame = +1
Query: 316 NDEDECMMRRTLAAHTDYIYTQ 381
+ E+EC++++T+AAHTDYIYTQ
Sbjct: 60 DSEEECLVKKTVAAHTDYIYTQ 81
>sw|Q9SZG4|PSK4_ARATH Putative phytosulfokines 4 precursor (AtPSK4)
[Contains: Phytosulfokine-alpha-like (PSK-alpha-like)
(Phytosulfokine-a-like); Phytosulfokine-beta (PSK-beta)
(Phytosulfokine-b)].
Length = 87
Score = 38.1 bits (87), Expect = 0.070
Identities = 15/26 (57%), Positives = 21/26 (80%), Gaps = 2/26 (7%)
Frame = +1
Query: 319 DEDECMMRRTLAAHTDYIYTQQ--HH 390
D+++C++RRTL AH DYIYT + HH
Sbjct: 62 DDEDCLVRRTLTAHLDYIYTHKNNHH 87
>sw|Q9FRF9|PSK3_ORYSA Phytosulfokines 3 precursor [Contains:
Phytosulfokine-alpha (PSK- alpha) (Phytosulfokine-a);
Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)].
Length = 75
Score = 37.4 bits (85), Expect = 0.12
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 319 DEDECMMRRTLAAHTDYIYTQQHH 390
+ED+C++ R L AH DYIYTQ H
Sbjct: 51 EEDDCLVERLLVAHLDYIYTQGKH 74
>sw|Q9AR89|PSK2_ORYSA Phytosulfokines 2 precursor [Contains:
Phytosulfokine-alpha (PSK- alpha) (Phytosulfokine-a);
Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)].
Length = 119
Score = 31.2 bits (69), Expect = 8.6
Identities = 14/22 (63%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = +1
Query: 319 DEDECMMRRTLA-AHTDYIYTQ 381
+ DEC+ RR L+ AH DYIYTQ
Sbjct: 93 NNDECVQRRLLSDAHLDYIYTQ 114
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 192,798,920
Number of Sequences: 1272877
Number of extensions: 1755153
Number of successful extensions: 4109
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4109
length of database: 406,886,216
effective HSP length: 116
effective length of database: 259,232,484
effective search space used: 18923971332
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)