BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493645.2.1
(870 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptr|Q94HA1|Q94HA1 Hypothetical 9.9 kDa protein. 157 2e-37
sptr|Q948Z4|Q948Z4 Snakin-1. 105 6e-22
sptr|O80641|O80641 GAST1/GASA-like protein. 103 4e-21
sptr|Q8LFM2|Q8LFM2 Contains similarity to gibberellin-stimulated... 100 3e-20
sptr|Q9FJF0|Q9FJF0 Similarity to gibberellin-stimulated transcri... 99 8e-20
sptr|O82328|O82328 GAST1/GASA-like protein (Putative gibberellin... 87 3e-16
sptr|Q948Z5|Q948Z5 Snakin2 precursor. 81 2e-14
sptr|Q93X17|Q93X17 Snakin2 precursor. 81 2e-14
sw|P46688|GAS2_ARATH Gibberellin-regulated protein 2 precursor. 79 6e-14
sptrnew|AAK96495|AAK96495 AT4g09600/T25P22_40. 79 8e-14
sw|P46687|GAS3_ARATH Gibberellin-regulated protein 3 precursor. 79 8e-14
sptr|Q9ZTX6|Q9ZTX6 Snakin-1 (Fragment). 78 2e-13
sptr|O65313|O65313 Cold-regulated LTCOR12. 76 5e-13
sptr|O49134|O49134 GAST-like protein. 76 5e-13
sw|P27057|GST1_LYCES GAST1 protein precursor. 76 7e-13
sptr|Q8GWK5|Q8GWK5 Putative gibberellin-regulated protein. 75 9e-13
sptr|Q93WR6|Q93WR6 Gibberellin induced protein 3. 75 1e-12
sptr|Q9FR10|Q9FR10 Gibberellin-induced protein 1 (Putative gibbe... 75 1e-12
sptr|O80848|O80848 Putative gibberellin-regulated protein. 75 1e-12
sptr|Q43615|Q43615 Gip1 protein. 75 1e-12
sptr|O24040|O24040 LTCOR11. 75 2e-12
sptr|Q9CA50|Q9CA50 GAST1-like protein. 75 2e-12
sptr|Q9XGJ3|Q9XGJ3 GEG protein. 75 2e-12
sptr|Q84J95|Q84J95 Hypothetical protein. 74 3e-12
sptr|Q38939|Q38939 GASA5. 74 3e-12
sw|P47926|RSI1_LYCES RSI-1 protein precursor (TR132). 74 3e-12
sptr|O65918|O65918 GASA5-like protein (Fragment). 72 1e-11
sptr|O65066|O65066 GASA5-like protein. 72 1e-11
sptr|Q9ZPX4|Q9ZPX4 GAST1/GASA-like protein. 71 2e-11
sptr|Q8L8X0|Q8L8X0 GAST1-like protein. 69 6e-11
>sptr|Q94HA1|Q94HA1 Hypothetical 9.9 kDa protein.
Length = 93
Score = 157 bits (396), Expect = 2e-37
Identities = 66/73 (90%), Positives = 69/73 (94%)
Frame = +2
Query: 296 SLRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDM 475
SL+VSMAGS FCDGKC VRCSKASRHDDCLKYCG+CCA+CNCVPSGTAGNKDECPCYRDM
Sbjct: 21 SLQVSMAGSDFCDGKCKVRCSKASRHDDCLKYCGVCCASCNCVPSGTAGNKDECPCYRDM 80
Query: 476 TTGHGNRTRPKCP 514
TTGHG R RPKCP
Sbjct: 81 TTGHGARKRPKCP 93
>sptr|Q948Z4|Q948Z4 Snakin-1.
Length = 88
Score = 105 bits (263), Expect = 6e-22
Identities = 48/75 (64%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Frame = +2
Query: 293 PSL-RVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYR 469
PSL + +MAGS FCD KC +RCSKA D CLKYCGICC C CVPSGT GNK ECPCYR
Sbjct: 17 PSLIQTTMAGSSFCDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYR 76
Query: 470 DMTTGHGNRTRPKCP 514
D G + KCP
Sbjct: 77 DKKNSKG---KSKCP 88
>sptr|O80641|O80641 GAST1/GASA-like protein.
Length = 87
Score = 103 bits (256), Expect = 4e-21
Identities = 44/73 (60%), Positives = 49/73 (67%)
Frame = +2
Query: 296 SLRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDM 475
S V + C GKC VRCSKA +H++CLKYC ICC CNCVPSGT G+KDECPCYRDM
Sbjct: 18 SFSVLSSADSSCGGKCNVRCSKAGQHEECLKYCNICCQKCNCVPSGTFGHKDECPCYRDM 77
Query: 476 TTGHGNRTRPKCP 514
G KCP
Sbjct: 78 KNSKGG---SKCP 87
>sptr|Q8LFM2|Q8LFM2 Contains similarity to gibberellin-stimulated
transcript 1 like protein (Hypothetical protein).
Length = 89
Score = 100 bits (249), Expect = 3e-20
Identities = 47/71 (66%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = +2
Query: 305 VSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCN-CVPSGTAGNKDECPCYRDMTT 481
+S A S C GKC VRCSKA R D CLKYC ICC CN CVPSGT GNKDECPCYRDM
Sbjct: 22 LSTADSSPCGGKCNVRCSKAGRQDRCLKYCNICCEKCNYCVPSGTYGNKDECPCYRDMKN 81
Query: 482 GHGNRTRPKCP 514
G KCP
Sbjct: 82 SKGT---SKCP 89
>sptr|Q9FJF0|Q9FJF0 Similarity to gibberellin-stimulated transcript
1 like protein.
Length = 88
Score = 99.0 bits (245), Expect = 8e-20
Identities = 46/74 (62%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = +2
Query: 296 SLRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCN-CVPSGTAGNKDECPCYRD 472
SL + C GKC VRCSKA R D CLKYC ICC CN CVPSGT GNKDECPCYRD
Sbjct: 18 SLFILSTADSSCGGKCNVRCSKAGRQDRCLKYCNICCEKCNYCVPSGTYGNKDECPCYRD 77
Query: 473 MTTGHGNRTRPKCP 514
M G KCP
Sbjct: 78 MKNSKGT---SKCP 88
>sptr|O82328|O82328 GAST1/GASA-like protein (Putative
gibberellin-regulated protein).
Length = 108
Score = 87.0 bits (214), Expect = 3e-16
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 326 FCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRP 505
+C KC RC +A D CLKYCGICC C CVPSGT GNK EC CYRD + G P
Sbjct: 49 WCGQKCEGRCKEAGMKDRCLKYCGICCKDCQCVPSGTYGNKHECACYRDKLSSKGT---P 105
Query: 506 KCP 514
KCP
Sbjct: 106 KCP 108
>sptr|Q948Z5|Q948Z5 Snakin2 precursor.
Length = 104
Score = 80.9 bits (198), Expect = 2e-14
Identities = 35/62 (56%), Positives = 41/62 (66%)
Frame = +2
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPK 508
C G CA RC +SR C + CG CCA CNCVP GT+GN + CPCY +TT HGN+ K
Sbjct: 46 CGGACAARCRLSSRPRLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTT-HGNKR--K 102
Query: 509 CP 514
CP
Sbjct: 103 CP 104
>sptr|Q93X17|Q93X17 Snakin2 precursor.
Length = 104
Score = 80.9 bits (198), Expect = 2e-14
Identities = 35/62 (56%), Positives = 41/62 (66%)
Frame = +2
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPK 508
C G CA RC +SR C + CG CCA CNCVP GT+GN + CPCY +TT HGN+ K
Sbjct: 46 CGGACAARCRLSSRPRLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTT-HGNKR--K 102
Query: 509 CP 514
CP
Sbjct: 103 CP 104
>sw|P46688|GAS2_ARATH Gibberellin-regulated protein 2 precursor.
Length = 99
Score = 79.3 bits (194), Expect = 6e-14
Identities = 35/62 (56%), Positives = 41/62 (66%)
Frame = +2
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPK 508
C G+C RCSK+SR CL+ C CC+ CNCVP GT+GN CPCY +TT HG R K
Sbjct: 41 CGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITT-HGGRL--K 97
Query: 509 CP 514
CP
Sbjct: 98 CP 99
>sptrnew|AAK96495|AAK96495 AT4g09600/T25P22_40.
Length = 99
Score = 79.0 bits (193), Expect = 8e-14
Identities = 35/62 (56%), Positives = 40/62 (64%)
Frame = +2
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPK 508
C G+C RCSK+SR + CL+ C CC CNCVP GTAGN CPCY +TT G R K
Sbjct: 41 CGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGG---RLK 97
Query: 509 CP 514
CP
Sbjct: 98 CP 99
>sw|P46687|GAS3_ARATH Gibberellin-regulated protein 3 precursor.
Length = 99
Score = 79.0 bits (193), Expect = 8e-14
Identities = 35/62 (56%), Positives = 40/62 (64%)
Frame = +2
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPK 508
C G+C RCSK+SR + CL+ C CC CNCVP GTAGN CPCY +TT G R K
Sbjct: 41 CGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGG---RLK 97
Query: 509 CP 514
CP
Sbjct: 98 CP 99
>sptr|Q9ZTX6|Q9ZTX6 Snakin-1 (Fragment).
Length = 50
Score = 77.8 bits (190), Expect = 2e-13
Identities = 34/53 (64%), Positives = 35/53 (66%)
Frame = +2
Query: 356 SKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP 514
SKA D CLKYCGICC C CVPSGT GNK ECPCYRD G + KCP
Sbjct: 1 SKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKG---KSKCP 50
>sptr|O65313|O65313 Cold-regulated LTCOR12.
Length = 101
Score = 76.3 bits (186), Expect = 5e-13
Identities = 33/62 (53%), Positives = 38/62 (61%)
Frame = +2
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPK 508
C G CA RC +SR C + CG CCA CVP GTAGN++ CPCY +TT G R K
Sbjct: 43 CGGACAARCQLSSRPHLCKRACGTCCARSRCVPPGTAGNQEMCPCYASLTTHGGKR---K 99
Query: 509 CP 514
CP
Sbjct: 100 CP 101
>sptr|O49134|O49134 GAST-like protein.
Length = 91
Score = 76.3 bits (186), Expect = 5e-13
Identities = 33/62 (53%), Positives = 37/62 (59%)
Frame = +2
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPK 508
C G C RC +SR C + CG CC C+CVP GTAGN D CPCY +TT G R K
Sbjct: 33 CGGACKARCRLSSRPHLCKRACGTCCQRCSCVPPGTAGNYDVCPCYATLTTHGGKR---K 89
Query: 509 CP 514
CP
Sbjct: 90 CP 91
>sw|P27057|GST1_LYCES GAST1 protein precursor.
Length = 112
Score = 75.9 bits (185), Expect = 7e-13
Identities = 32/62 (51%), Positives = 36/62 (58%)
Frame = +2
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPK 508
C KC RCSK S C+ +C CCA C CVP+GT GNK CPCY + T G PK
Sbjct: 54 CQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGG---PK 110
Query: 509 CP 514
CP
Sbjct: 111 CP 112
>sptr|Q8GWK5|Q8GWK5 Putative gibberellin-regulated protein.
Length = 119
Score = 75.5 bits (184), Expect = 9e-13
Identities = 34/62 (54%), Positives = 38/62 (61%)
Frame = +2
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPK 508
C CA RCSK SR C + CG CCA C CVP GT+GN CPCY + T HGN+ K
Sbjct: 61 CGHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRT-HGNKL--K 117
Query: 509 CP 514
CP
Sbjct: 118 CP 119
>sptr|Q93WR6|Q93WR6 Gibberellin induced protein 3.
Length = 112
Score = 75.1 bits (183), Expect = 1e-12
Identities = 32/62 (51%), Positives = 36/62 (58%)
Frame = +2
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPK 508
C KC RCSK S C+ +C CCA C CVP+GT GNK CPCY + T G PK
Sbjct: 54 CQPKCTYRCSKTSFKKPCMFFCQKCCAKCLCVPAGTYGNKQTCPCYNNWKTKEGG---PK 110
Query: 509 CP 514
CP
Sbjct: 111 CP 112
>sptr|Q9FR10|Q9FR10 Gibberellin-induced protein 1 (Putative
gibberellin induced protein 2).
Length = 112
Score = 75.1 bits (183), Expect = 1e-12
Identities = 32/62 (51%), Positives = 36/62 (58%)
Frame = +2
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPK 508
C KC RCSK S C+ +C CCA C CVP+GT GNK CPCY + T G PK
Sbjct: 54 CQPKCTYRCSKTSFKKPCMFFCQKCCAKCLCVPAGTYGNKQTCPCYNNWKTKEGG---PK 110
Query: 509 CP 514
CP
Sbjct: 111 CP 112
>sptr|O80848|O80848 Putative gibberellin-regulated protein.
Length = 103
Score = 75.1 bits (183), Expect = 1e-12
Identities = 32/62 (51%), Positives = 36/62 (58%)
Frame = +2
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPK 508
C C RCS S CL +C CC C CVPSGT G+K+ECPCY + TT G PK
Sbjct: 45 CPKACEYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTKEGG---PK 101
Query: 509 CP 514
CP
Sbjct: 102 CP 103
>sptr|Q43615|Q43615 Gip1 protein.
Length = 112
Score = 75.1 bits (183), Expect = 1e-12
Identities = 32/62 (51%), Positives = 36/62 (58%)
Frame = +2
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPK 508
C KC RCSK S C+ +C CCA C CVP+GT GNK CPCY + T G PK
Sbjct: 54 CQPKCTYRCSKTSFKKPCMFFCQKCCAKCLCVPAGTYGNKQTCPCYNNWKTKEGG---PK 110
Query: 509 CP 514
CP
Sbjct: 111 CP 112
>sptr|O24040|O24040 LTCOR11.
Length = 102
Score = 74.7 bits (182), Expect = 2e-12
Identities = 34/63 (53%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +2
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECP-CYRDMTTGHGNRTRP 505
C G CA RC +SR C + CG CCA C CVP GTAGN++ CP CY +TT G R
Sbjct: 43 CGGACAARCQLSSRPHLCKRACGTCCARCACVPPGTAGNQEMCPKCYASLTTHGGKR--- 99
Query: 506 KCP 514
KCP
Sbjct: 100 KCP 102
>sptr|Q9CA50|Q9CA50 GAST1-like protein.
Length = 80
Score = 74.7 bits (182), Expect = 2e-12
Identities = 31/62 (50%), Positives = 35/62 (56%)
Frame = +2
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPK 508
C G+C RCS H C+ +C CCA C CVP GT GNK CPCY + T G PK
Sbjct: 22 CGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGG---PK 78
Query: 509 CP 514
CP
Sbjct: 79 CP 80
>sptr|Q9XGJ3|Q9XGJ3 GEG protein.
Length = 101
Score = 74.7 bits (182), Expect = 2e-12
Identities = 32/62 (51%), Positives = 38/62 (61%)
Frame = +2
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPK 508
C C RC +SR + C + CG CCA C CVP GT+GN+ CPCY +MTT G R K
Sbjct: 43 CGAACKARCRLSSRPNLCHRACGTCCARCRCVPPGTSGNQKVCPCYYNMTTHGGRR---K 99
Query: 509 CP 514
CP
Sbjct: 100 CP 101
>sptr|Q84J95|Q84J95 Hypothetical protein.
Length = 97
Score = 73.9 bits (180), Expect = 3e-12
Identities = 31/62 (50%), Positives = 36/62 (58%)
Frame = +2
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPK 508
C+ KC+ RCS S C+ +C CC C CVP GT GNK CPCY + T G RPK
Sbjct: 39 CNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKEG---RPK 95
Query: 509 CP 514
CP
Sbjct: 96 CP 97
>sptr|Q38939|Q38939 GASA5.
Length = 97
Score = 73.9 bits (180), Expect = 3e-12
Identities = 31/62 (50%), Positives = 36/62 (58%)
Frame = +2
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPK 508
C+ KC+ RCS S C+ +C CC C CVP GT GNK CPCY + T G RPK
Sbjct: 39 CNSKCSYRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKEG---RPK 95
Query: 509 CP 514
CP
Sbjct: 96 CP 97
>sw|P47926|RSI1_LYCES RSI-1 protein precursor (TR132).
Length = 96
Score = 73.6 bits (179), Expect = 3e-12
Identities = 30/62 (48%), Positives = 35/62 (56%)
Frame = +2
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPK 508
C +C RCS S C+ +C CCATC CVP G GNK CPCY + T G +PK
Sbjct: 38 CKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPKGVYGNKQSCPCYNNWKTQEG---KPK 94
Query: 509 CP 514
CP
Sbjct: 95 CP 96
>sptr|O65918|O65918 GASA5-like protein (Fragment).
Length = 62
Score = 71.6 bits (174), Expect = 1e-11
Identities = 30/62 (48%), Positives = 35/62 (56%)
Frame = +2
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPK 508
C +C+ RCS S C+ +C CCA C CVP GT GNK CPCY + T G PK
Sbjct: 4 CGQRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGG---PK 60
Query: 509 CP 514
CP
Sbjct: 61 CP 62
>sptr|O65066|O65066 GASA5-like protein.
Length = 110
Score = 71.6 bits (174), Expect = 1e-11
Identities = 30/62 (48%), Positives = 35/62 (56%)
Frame = +2
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPK 508
C +C+ RCS S C+ +C CCA C CVP GT GNK CPCY + T G PK
Sbjct: 52 CGQRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTFGNKQVCPCYNNWKTQQGG---PK 108
Query: 509 CP 514
CP
Sbjct: 109 CP 110
>sptr|Q9ZPX4|Q9ZPX4 GAST1/GASA-like protein.
Length = 88
Score = 70.9 bits (172), Expect = 2e-11
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = +2
Query: 347 VRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPK 508
VRCS +SR + C + CG CCA CNCV GT+GN D+CPCY +TT G R K
Sbjct: 26 VRCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKEVK 79
>sptr|Q8L8X0|Q8L8X0 GAST1-like protein.
Length = 98
Score = 69.3 bits (168), Expect = 6e-11
Identities = 30/62 (48%), Positives = 34/62 (54%)
Frame = +2
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPK 508
C C RC + R C + CG CC CNCVP GT GN D+C CY +TT G R K
Sbjct: 40 CXSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRR---K 96
Query: 509 CP 514
CP
Sbjct: 97 CP 98
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 629,197,661
Number of Sequences: 1272877
Number of extensions: 13488077
Number of successful extensions: 57496
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56596
length of database: 406,886,216
effective HSP length: 121
effective length of database: 252,868,099
effective search space used: 42481840632
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)