BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2441599.2.1
(755 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sw|Q9XJ54|NTF2_ORYSA Nuclear transport factor 2 (NTF-2). 211 1e-53
sw|Q9C7F5|NTF2_ARATH Nuclear transport factor 2 (NTF-2). 181 1e-44
sptr|Q8LC75|Q8LC75 Nuclear transport factor 2, putative. 181 1e-44
sptr|Q9FZK4|Q9FZK4 F17L21.10 (Similar to nuclear transport facto... 176 3e-43
sptr|Q8RU32|Q8RU32 Putative nuclear transport factor 2. 149 5e-35
sptr|Q9LPY0|Q9LPY0 T23J18.22. 140 2e-32
sptr|Q8NJ52|Q8NJ52 Putative nuclear transport factor 2. 133 2e-30
sptr|Q96VN3|Q96VN3 Nuclear transport factor 2. 125 8e-28
sw|P33331|NTF2_YEAST Nuclear transport factor 2 (NTF-2) (Nuclear... 124 1e-27
sw|Q10100|NTF2_SCHPO Probable nuclear transport factor 2 (NTF-2). 122 5e-27
sptr|Q8NKB7|Q8NKB7 Putative nuclear transport factor 2. 122 7e-27
sw|Q9P926|NTF2_CANAL Nuclear transport factor 2 (NTF-2). 117 2e-25
sptr|Q9P8H0|Q9P8H0 Rph1. 110 3e-23
sw|P87102|NTF2_NEUCR Nuclear transport factor 2 (NTF-2). 107 2e-22
sptr|Q86HW7|Q86HW7 Similar to Arabidopsis thaliana (Mouse-ear cr... 93 3e-18
sptrnew|EAA31056|EAA31056 Hypothetical protein. 92 6e-18
sptrnew|EAA04212|EAA04212 AgCP3583 (Fragment). 89 8e-17
sptrnew|BAC34511|BAC34511 9 days embryo whole body cDNA, RIKEN f... 87 2e-16
sptrnew|BAC25936|BAC25936 13 days embryo whole body cDNA, RIKEN ... 87 2e-16
sw|P13662|NTF2_HUMAN Nuclear transport factor 2 (NTF-2) (Placent... 87 2e-16
sptr|Q9VRD6|Q9VRD6 CG1740 protein (GM08921p). 87 2e-16
sptrnew|EAA06639|EAA06639 AgCP13335 (Fragment). 86 7e-16
sptrnew|AAQ02308|AAQ02308 CG1740 protein. 85 9e-16
sptr|Q8I078|Q8I078 CG10174 protein. 85 9e-16
sptr|Q9VJ85|Q9VJ85 CG10174 protein. 85 9e-16
sptrnew|AAQ02311|AAQ02311 CG10174 protein. 84 2e-15
sptr|Q8I0N0|Q8I0N0 CG10174 protein. 84 2e-15
sptr|Q8I8H2|Q8I8H2 CG10174 protein. 84 2e-15
sptrnew|AAQ02312|AAQ02312 CG10174 protein. 84 3e-15
sw|O42242|NTF2_XENLA Nuclear transport factor 2 (NTF-2) (P10). 82 7e-15
>sw|Q9XJ54|NTF2_ORYSA Nuclear transport factor 2 (NTF-2).
Length = 122
Score = 211 bits (536), Expect = 1e-53
Identities = 100/122 (81%), Positives = 108/122 (88%)
Frame = -2
Query: 622 MDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQAC 443
MD DAVAKAFVEHYYRTFDTNR ALV LYQ+ SMLTFEGQ+F G +AIAGKLGSLPF C
Sbjct: 1 MDADAVAKAFVEHYYRTFDTNRPALVSLYQDGSMLTFEGQQFLGAAAIAGKLGSLPFAQC 60
Query: 442 EHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRLN 263
H I TVDCQPSGPQGGMLVFVSGS+RTGP+EHP+KFSQ F LLPA G+F+VQNDMFRLN
Sbjct: 61 HHDINTVDCQPSGPQGGMLVFVSGSLRTGPDEHPLKFSQMFQLLPAGGNFYVQNDMFRLN 120
Query: 262 YG 257
YG
Sbjct: 121 YG 122
>sw|Q9C7F5|NTF2_ARATH Nuclear transport factor 2 (NTF-2).
Length = 126
Score = 181 bits (458), Expect = 1e-44
Identities = 87/122 (71%), Positives = 97/122 (79%), Gaps = 1/122 (0%)
Frame = -2
Query: 622 MDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQAC 443
MDPDAV+KAFVEHYY TFDTNR L GLYQE SMLTFEGQK QG +I KL SLPFQ C
Sbjct: 4 MDPDAVSKAFVEHYYSTFDTNRVGLAGLYQEASMLTFEGQKIQGVQSIVAKLTSLPFQQC 63
Query: 442 EHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPA-AGSFFVQNDMFRL 266
+H I TVDCQPSGP GMLVFVSG+++ EEH +KFSQ FHL+P GSF+V ND+FRL
Sbjct: 64 KHHISTVDCQPSGPASGMLVFVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYVFNDIFRL 123
Query: 265 NY 260
NY
Sbjct: 124 NY 125
>sptr|Q8LC75|Q8LC75 Nuclear transport factor 2, putative.
Length = 123
Score = 181 bits (458), Expect = 1e-44
Identities = 87/122 (71%), Positives = 97/122 (79%), Gaps = 1/122 (0%)
Frame = -2
Query: 622 MDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQAC 443
MDPDAV+KAFVEHYY TFDTNR L GLYQE SMLTFEGQK QG +I KL SLPFQ C
Sbjct: 1 MDPDAVSKAFVEHYYSTFDTNRVGLAGLYQEASMLTFEGQKIQGVQSIVAKLTSLPFQQC 60
Query: 442 EHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPA-AGSFFVQNDMFRL 266
+H I TVDCQPSGP GMLVFVSG+++ EEH +KFSQ FHL+P GSF+V ND+FRL
Sbjct: 61 KHHISTVDCQPSGPASGMLVFVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYVFNDIFRL 120
Query: 265 NY 260
NY
Sbjct: 121 NY 122
>sptr|Q9FZK4|Q9FZK4 F17L21.10 (Similar to nuclear transport factor
2).
Length = 122
Score = 176 bits (446), Expect = 3e-43
Identities = 83/121 (68%), Positives = 94/121 (77%)
Frame = -2
Query: 622 MDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQAC 443
MDPDAVAKAFVEHYY TFD NR LV LYQE SMLTFEGQK QG I KL LPFQ C
Sbjct: 1 MDPDAVAKAFVEHYYSTFDANRPGLVSLYQEGSMLTFEGQKIQGSQNIVAKLTGLPFQQC 60
Query: 442 EHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRLN 263
+H I TVDCQPSGP GGMLVFVSG+++ E+H +KFSQ FHL+ G+++V ND+FRLN
Sbjct: 61 KHNITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLISNQGNYYVFNDIFRLN 120
Query: 262 Y 260
Y
Sbjct: 121 Y 121
>sptr|Q8RU32|Q8RU32 Putative nuclear transport factor 2.
Length = 146
Score = 149 bits (375), Expect = 5e-35
Identities = 76/131 (58%), Positives = 93/131 (70%), Gaps = 2/131 (1%)
Frame = -2
Query: 643 GGGEVMAMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLG 464
GGG + D VA+AFVE+YY+TFDTNRAAL LY +TSML+FEG G I KL
Sbjct: 16 GGGGGWSDQCDVVARAFVEYYYQTFDTNRAALAALYGQTSMLSFEGHMVAGAEEIGRKLL 75
Query: 463 SLPFQACEHQIVTVDCQPSGP-QGGMLVFVSGSIRTGPEEHPIKFSQAFHLLP-AAGSFF 290
LPF+ C H + TVDCQP+ GG+LVFVSG+++ EEH ++FSQ F L+P GSFF
Sbjct: 76 GLPFEQCRHAVCTVDCQPTPSFPGGILVFVSGNLQLAGEEHQLRFSQMFQLVPNEQGSFF 135
Query: 289 VQNDMFRLNYG 257
VQND+FRLNYG
Sbjct: 136 VQNDIFRLNYG 146
>sptr|Q9LPY0|Q9LPY0 T23J18.22.
Length = 522
Score = 140 bits (353), Expect = 2e-32
Identities = 73/129 (56%), Positives = 89/129 (68%), Gaps = 4/129 (3%)
Frame = -2
Query: 613 DAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQACEHQ 434
+ VA AFV HYY FD +R++L LY TS+LTFEGQ G I+ KL LPF C H
Sbjct: 337 EEVASAFVNHYYHLFDNDRSSLSSLYNPTSLLTFEGQTIYGVDNISNKLKQLPFDQCHHL 396
Query: 433 IVTVDCQPS---GPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPA-AGSFFVQNDMFRL 266
I TVD QPS G GG+LVFVSGSI+ E+HP++FSQ FHL+P GSFFVQN+MFRL
Sbjct: 397 ISTVDSQPSSMAGGCGGILVFVSGSIQLHGEDHPLRFSQTFHLIPVLQGSFFVQNEMFRL 456
Query: 265 NYG*RQPIL 239
NY ++ +L
Sbjct: 457 NYVGQEALL 465
>sptr|Q8NJ52|Q8NJ52 Putative nuclear transport factor 2.
Length = 125
Score = 133 bits (335), Expect = 2e-30
Identities = 65/120 (54%), Positives = 83/120 (69%)
Frame = -2
Query: 619 DPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQACE 440
D +A+A+ F E YY+TFDT+RA L LY+E SMLTFE F G + I GKL LPFQ E
Sbjct: 3 DFNAIAQQFTEFYYKTFDTDRAQLAPLYRENSMLTFEQSPFLGTANIVGKLQELPFQRIE 62
Query: 439 HQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRLNY 260
HQ+ TVD QPS GG+LV VSG++ E P+ ++Q F LLPA G+++V ND+FRL Y
Sbjct: 63 HQVATVDAQPSNESGGILVVVSGALLVEEERRPMSYTQTFQLLPADGAYYVFNDVFRLVY 122
>sptr|Q96VN3|Q96VN3 Nuclear transport factor 2.
Length = 125
Score = 125 bits (313), Expect = 8e-28
Identities = 62/121 (51%), Positives = 84/121 (69%), Gaps = 1/121 (0%)
Frame = -2
Query: 619 DPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQACE 440
D ++A+ FV YY+TFD NRA L LY++ SMLTFE QG + I KL SLPFQ +
Sbjct: 3 DFQSIAQQFVTFYYQTFDGNRAGLAPLYRDHSMLTFETSAIQGVAGIIEKLTSLPFQKVQ 62
Query: 439 HQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLP-AAGSFFVQNDMFRLN 263
HQ+ T+D QPSG GG+LV V+G++ E++P+ ++Q F L+P AGS+FV ND+FRL
Sbjct: 63 HQVSTLDAQPSGEHGGILVLVTGALLVDEEKNPMNYTQTFQLMPDGAGSYFVLNDVFRLI 122
Query: 262 Y 260
Y
Sbjct: 123 Y 123
>sw|P33331|NTF2_YEAST Nuclear transport factor 2 (NTF-2) (Nuclear
transport factor P10).
Length = 125
Score = 124 bits (312), Expect = 1e-27
Identities = 58/123 (47%), Positives = 83/123 (67%)
Frame = -2
Query: 628 MAMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQ 449
M++D + +A+ F + YY FDT+R+ L LY+ SMLTFE + QG I KL SLPFQ
Sbjct: 1 MSLDFNTLAQNFTQFYYNQFDTDRSQLGNLYRNESMLTFETSQLQGAKDIVEKLVSLPFQ 60
Query: 448 ACEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFR 269
+H+I T+D QP+ P G +LV ++G + E++P +FSQ FHL+P S++V ND+FR
Sbjct: 61 KVQHRITTLDAQPASPNGDVLVMITGDLLIDEEQNPQRFSQVFHLIPDGNSYYVFNDIFR 120
Query: 268 LNY 260
LNY
Sbjct: 121 LNY 123
>sw|Q10100|NTF2_SCHPO Probable nuclear transport factor 2 (NTF-2).
Length = 123
Score = 122 bits (306), Expect = 5e-27
Identities = 58/121 (47%), Positives = 84/121 (69%)
Frame = -2
Query: 619 DPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQACE 440
D +A+A F + YY+TFD++R+ L LY+E SML+FEG + QG AI KL SLPFQ +
Sbjct: 3 DYNALATQFTQFYYQTFDSDRSQLSSLYREESMLSFEGAQLQGTKAIVEKLVSLPFQRVQ 62
Query: 439 HQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRLNY 260
H+I T+D QP+G G ++V V+G + E+ ++SQ FHL+ G+++V ND+FRLNY
Sbjct: 63 HRISTLDAQPTGTTGSVIVMVTGELLLDEEQMAQRYSQVFHLVNNNGNYYVLNDLFRLNY 122
Query: 259 G 257
G
Sbjct: 123 G 123
>sptr|Q8NKB7|Q8NKB7 Putative nuclear transport factor 2.
Length = 124
Score = 122 bits (305), Expect = 7e-27
Identities = 65/120 (54%), Positives = 83/120 (69%)
Frame = -2
Query: 619 DPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQACE 440
D +A+A+ FVE YY+TFD NRA L LY+E SMLTFE Q QG +AI KL +LPFQ +
Sbjct: 3 DFNAIAQQFVEFYYKTFDGNRAGLGALYKEHSMLTFEAQGTQGSAAIVEKLQNLPFQEIQ 62
Query: 439 HQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRLNY 260
H+ TVD QPS G+LV V+G++ G E P+ F+QAF L A G++FV ND+FRL Y
Sbjct: 63 HRTDTVDAQPSA-DDGILVLVTGALLLGGESKPMSFTQAFQLKNAEGNWFVLNDVFRLVY 121
>sw|Q9P926|NTF2_CANAL Nuclear transport factor 2 (NTF-2).
Length = 124
Score = 117 bits (293), Expect = 2e-25
Identities = 58/123 (47%), Positives = 80/123 (65%)
Frame = -2
Query: 628 MAMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQ 449
M++D +AVA F YY FD++R+ L LY+ SMLTFE + QG I KL SLPFQ
Sbjct: 1 MSVDFNAVATEFCNFYYNQFDSDRSQLGNLYRNESMLTFETSQLQGARDIVEKLASLPFQ 60
Query: 448 ACEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFR 269
H+I T+D QP+ G +LV V+G + E++ ++SQ FHL+P GS++V ND+FR
Sbjct: 61 KVAHRISTLDAQPASANGDILVMVTGELLIDEEQNAQRYSQVFHLIPDNGSYYVFNDIFR 120
Query: 268 LNY 260
LNY
Sbjct: 121 LNY 123
>sptr|Q9P8H0|Q9P8H0 Rph1.
Length = 123
Score = 110 bits (274), Expect = 3e-23
Identities = 56/123 (45%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Frame = -2
Query: 628 MAMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQ 449
M++D + +AK F E YY+TFDT+R+ L LY++ SMLTF G + QG AI KL LPF
Sbjct: 1 MSVDFNTLAKQFCEFYYQTFDTDRSQLGNLYRDHSMLTFTGTQHQGAQAIVEKLVGLPFG 60
Query: 448 ACEHQIVTVDCQPSGPQGG-MLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMF 272
H+I +D QP+ QGG ++V V+G + ++P+ + Q FHL+P S++V ND+F
Sbjct: 61 QVRHKISDIDAQPASAQGGDVIVLVTGELCV-DGDNPLPYGQVFHLIPDGSSYYVFNDIF 119
Query: 271 RLN 263
RLN
Sbjct: 120 RLN 122
>sw|P87102|NTF2_NEUCR Nuclear transport factor 2 (NTF-2).
Length = 124
Score = 107 bits (267), Expect = 2e-22
Identities = 56/122 (45%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Frame = -2
Query: 628 MAMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQ 449
M++D A+A FV HYY TFD++R L GLY++ SMLTFEG + G I KL SLPFQ
Sbjct: 1 MSLDFTAIATQFVAHYYSTFDSDRKNLAGLYRDNSMLTFEGAQSLGAQGITEKLTSLPFQ 60
Query: 448 ACEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHL-LPAAGSFFVQNDMF 272
+H+ D QP+ GG+++ V+G + E+ P+ +SQAF L A+G +FV ND+F
Sbjct: 61 KVKHEYGPPDAQPTA-TGGIIILVTGQLIVDDEQRPLGYSQAFQLSQDASGQWFVFNDIF 119
Query: 271 RL 266
+L
Sbjct: 120 KL 121
>sptr|Q86HW7|Q86HW7 Similar to Arabidopsis thaliana (Mouse-ear
cress). F17L21.10 (Similar to nuclear transport factor
2).
Length = 127
Score = 93.2 bits (230), Expect = 3e-18
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Frame = -2
Query: 631 VMAMDPDAVA--KAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSL 458
+ ++DP V K FVEHYY FD+NRA L +YQ+ + LT+EG+ G AI + L
Sbjct: 1 MQSVDPQVVGVGKQFVEHYYGIFDSNRAGLTQIYQQQTTLTWEGKFLSGADAIVKHIVEL 60
Query: 457 PFQACEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQND 278
PFQ +I ++DCQ + G M+ I G ++ +KF Q F+L GSF + ND
Sbjct: 61 PFQQTNRKINSIDCQQTYQPGIMITVTGTLIIDGEAKNQLKFVQVFNLASNNGSFLLIND 120
Query: 277 MFRL 266
FRL
Sbjct: 121 FFRL 124
>sptrnew|EAA31056|EAA31056 Hypothetical protein.
Length = 119
Score = 92.4 bits (228), Expect = 6e-18
Identities = 51/122 (41%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Frame = -2
Query: 628 MAMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQ 449
M++D A+A FV HYY TFD++R L GLY++ SMLTFEG + G I KL +
Sbjct: 1 MSLDFTAIATQFVAHYYSTFDSDRKNLAGLYRDNSMLTFEGAQSLGAQGITEKLTKV--- 57
Query: 448 ACEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHL-LPAAGSFFVQNDMF 272
+H+ D QP+ GG+++ V+G + E+ P+ +SQAF L A+G +FV ND+F
Sbjct: 58 --KHEYGPPDAQPTA-TGGIIILVTGQLIVDDEQRPLGYSQAFQLSQDASGQWFVFNDIF 114
Query: 271 RL 266
+L
Sbjct: 115 KL 116
>sptrnew|EAA04212|EAA04212 AgCP3583 (Fragment).
Length = 131
Score = 88.6 bits (218), Expect = 8e-17
Identities = 56/127 (44%), Positives = 75/127 (59%), Gaps = 5/127 (3%)
Frame = -2
Query: 628 MAMDP--DAVAKAFVEHYYRTFD--TNRAALVGLYQ-ETSMLTFEGQKFQGPSAIAGKLG 464
MA++P + + K FV YY FD T R +LV LY E S +TFEGQ+ QG + I KL
Sbjct: 2 MAINPQYEEIGKGFVTQYYALFDDSTQRPSLVNLYNAELSFMTFEGQQIQGAAKILEKLQ 61
Query: 463 SLPFQACEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQ 284
SL FQ + + VD QP GG+L+ V G ++ E+ P +SQ F L P G+FF
Sbjct: 62 SLTFQNIKRVLTAVDSQPMF-DGGVLINVLGRLQC-DEDPPHAYSQTFVLKPLGGTFFCA 119
Query: 283 NDMFRLN 263
+D+FRLN
Sbjct: 120 HDIFRLN 126
>sptrnew|BAC34511|BAC34511 9 days embryo whole body cDNA, RIKEN
full-length enriched library, clone:D030062A22
product:nuclear transport factor, full insert sequence.
Length = 127
Score = 87.0 bits (214), Expect = 2e-16
Identities = 50/123 (40%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Frame = -2
Query: 613 DAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQACEHQ 434
+ + +F++HYY+ FD +R L +Y + S LT+EGQ+FQG +AI KL SLPFQ +H
Sbjct: 8 EQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHS 67
Query: 433 IVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIK-FSQAFHLLPAAGSFFVQNDMFRL--- 266
I D QP+ P ++ V G ++ +E PI F Q F L ++ NDMFRL
Sbjct: 68 ITAQDHQPT-PDSCIISMVVGQLKA--DEDPIMGFHQMFLLKNINDAWVCTNDMFRLALH 124
Query: 265 NYG 257
N+G
Sbjct: 125 NFG 127
>sptrnew|BAC25936|BAC25936 13 days embryo whole body cDNA, RIKEN
full-length enriched library, clone:3930402M11
product:nuclear transport factor, full insert sequence.
Length = 127
Score = 87.0 bits (214), Expect = 2e-16
Identities = 50/123 (40%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Frame = -2
Query: 613 DAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQACEHQ 434
+ + +F++HYY+ FD +R L +Y + S LT+EGQ+FQG +AI KL SLPFQ +H
Sbjct: 8 EQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHS 67
Query: 433 IVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIK-FSQAFHLLPAAGSFFVQNDMFRL--- 266
I D QP+ P ++ V G ++ +E PI F Q F L ++ NDMFRL
Sbjct: 68 ITAQDHQPT-PDSCIISMVVGQLKA--DEDPIMGFHQMFLLKNINDAWVCTNDMFRLALH 124
Query: 265 NYG 257
N+G
Sbjct: 125 NFG 127
>sw|P13662|NTF2_HUMAN Nuclear transport factor 2 (NTF-2) (Placental
protein 15) (PP15).
Length = 127
Score = 87.0 bits (214), Expect = 2e-16
Identities = 50/123 (40%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Frame = -2
Query: 613 DAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQACEHQ 434
+ + +F++HYY+ FD +R L +Y + S LT+EGQ+FQG +AI KL SLPFQ +H
Sbjct: 8 EQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHS 67
Query: 433 IVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIK-FSQAFHLLPAAGSFFVQNDMFRL--- 266
I D QP+ P ++ V G ++ +E PI F Q F L ++ NDMFRL
Sbjct: 68 ITAQDHQPT-PDSCIISMVVGQLKA--DEDPIMGFHQMFLLKNINDAWVCTNDMFRLALH 124
Query: 265 NYG 257
N+G
Sbjct: 125 NFG 127
>sptr|Q9VRD6|Q9VRD6 CG1740 protein (GM08921p).
Length = 130
Score = 87.0 bits (214), Expect = 2e-16
Identities = 55/127 (43%), Positives = 75/127 (59%), Gaps = 5/127 (3%)
Frame = -2
Query: 628 MAMDP--DAVAKAFVEHYYRTFD--TNRAALVGLYQET-SMLTFEGQKFQGPSAIAGKLG 464
M+++P + + K FV+ YY FD NRA +V Y T S +TFEG + QG I K+
Sbjct: 1 MSLNPQYEDIGKGFVQQYYAIFDDPANRANVVNFYSATDSFMTFEGHQIQGAPKILEKVQ 60
Query: 463 SLPFQACEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQ 284
SL FQ I TVD QP+ GG+L+ V G ++ ++ P FSQ F L AG+FFV
Sbjct: 61 SLSFQKITRVITTVDSQPTF-DGGVLINVLGRLQC-DDDPPHAFSQVFFLKANAGTFFVA 118
Query: 283 NDMFRLN 263
+D+FRLN
Sbjct: 119 HDIFRLN 125
>sptrnew|EAA06639|EAA06639 AgCP13335 (Fragment).
Length = 131
Score = 85.5 bits (210), Expect = 7e-16
Identities = 55/127 (43%), Positives = 72/127 (56%), Gaps = 5/127 (3%)
Frame = -2
Query: 628 MAMDP--DAVAKAFVEHYYRTFD--TNRAALVGLYQ-ETSMLTFEGQKFQGPSAIAGKLG 464
MA++P + + K FV YY FD T R LV LY E S +TFEGQ+ QG + I KL
Sbjct: 2 MALNPQYEEIGKGFVTQYYALFDDSTQRPTLVNLYNAELSFMTFEGQQIQGAAKILEKLQ 61
Query: 463 SLPFQACEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQ 284
SL FQ + VD QP GG+L+ V G ++ ++ P +SQ F L P SFF
Sbjct: 62 SLTFQNITRVLTAVDSQPMF-DGGVLINVLGRLQC-DDDPPHAYSQTFVLKPIGASFFCA 119
Query: 283 NDMFRLN 263
+D+FRLN
Sbjct: 120 HDIFRLN 126
>sptrnew|AAQ02308|AAQ02308 CG1740 protein.
Length = 130
Score = 85.1 bits (209), Expect = 9e-16
Identities = 54/127 (42%), Positives = 75/127 (59%), Gaps = 5/127 (3%)
Frame = -2
Query: 628 MAMDP--DAVAKAFVEHYYRTFD--TNRAALVGLYQET-SMLTFEGQKFQGPSAIAGKLG 464
M+++P + + K FV+ YY FD NRA +V Y T S +TFEG + QG I K+
Sbjct: 1 MSLNPQYEDIGKGFVQQYYAIFDDPANRANVVNFYSATDSFMTFEGHQIQGAPKILEKVQ 60
Query: 463 SLPFQACEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQ 284
SL FQ I TVD QP+ GG+L+ V G ++ ++ P +SQ F L AG+FFV
Sbjct: 61 SLSFQKITRVITTVDSQPTF-DGGVLINVLGRLQC-DDDPPHAYSQVFVLKANAGTFFVA 118
Query: 283 NDMFRLN 263
+D+FRLN
Sbjct: 119 HDIFRLN 125
>sptr|Q8I078|Q8I078 CG10174 protein.
Length = 130
Score = 85.1 bits (209), Expect = 9e-16
Identities = 51/118 (43%), Positives = 67/118 (56%), Gaps = 3/118 (2%)
Frame = -2
Query: 607 VAKAFVEHYYRTFD--TNRAALVGLYQET-SMLTFEGQKFQGPSAIAGKLGSLPFQACEH 437
+ K FV+ YY FD NR ++ Y T S +TFEG + QG I K+ SL FQ
Sbjct: 10 IGKEFVQQYYAIFDDPANRKNVINFYNATDSFMTFEGNQIQGAPKILEKVQSLSFQKIAR 69
Query: 436 QIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRLN 263
I TVD QP+ GG+L+ V G ++ ++ P FSQ F L P GS FV +D+FRLN
Sbjct: 70 VITTVDSQPTS-DGGVLIIVLGRLKC-DDDPPHAFSQIFLLKPNGGSLFVAHDIFRLN 125
>sptr|Q9VJ85|Q9VJ85 CG10174 protein.
Length = 130
Score = 85.1 bits (209), Expect = 9e-16
Identities = 51/118 (43%), Positives = 67/118 (56%), Gaps = 3/118 (2%)
Frame = -2
Query: 607 VAKAFVEHYYRTFD--TNRAALVGLYQET-SMLTFEGQKFQGPSAIAGKLGSLPFQACEH 437
+ K FV+ YY FD NR ++ Y T S +TFEG + QG I K+ SL FQ
Sbjct: 10 IGKEFVQQYYAIFDDPANRENVINFYNATDSFMTFEGNQIQGAPKILEKVQSLSFQKIAR 69
Query: 436 QIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRLN 263
I TVD QP+ GG+L+ V G ++ ++ P FSQ F L P GS FV +D+FRLN
Sbjct: 70 VITTVDSQPTS-DGGVLIIVLGRLKC-DDDPPHAFSQIFLLKPNGGSLFVAHDIFRLN 125
>sptrnew|AAQ02311|AAQ02311 CG10174 protein.
Length = 130
Score = 84.3 bits (207), Expect = 2e-15
Identities = 54/127 (42%), Positives = 72/127 (56%), Gaps = 5/127 (3%)
Frame = -2
Query: 628 MAMDP--DAVAKAFVEHYYRTFD--TNRAALVGLYQET-SMLTFEGQKFQGPSAIAGKLG 464
M+++P + + K FV+ YY D NR V Y T S +TFEG + QG I K+
Sbjct: 1 MSLNPQYEEIGKGFVQQYYAILDDLANRENAVNFYSVTDSFMTFEGHQIQGAPKILEKVQ 60
Query: 463 SLPFQACEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQ 284
SL FQ I TVD QP+ GG+L+FV G ++ ++ P FSQ F L P GSF V
Sbjct: 61 SLRFQKISIVITTVDSQPTF-DGGVLIFVLGRLKC-DDDPPHSFSQIFLLKPNGGSFLVA 118
Query: 283 NDMFRLN 263
+D+FRLN
Sbjct: 119 HDIFRLN 125
>sptr|Q8I0N0|Q8I0N0 CG10174 protein.
Length = 130
Score = 84.0 bits (206), Expect = 2e-15
Identities = 51/118 (43%), Positives = 67/118 (56%), Gaps = 3/118 (2%)
Frame = -2
Query: 607 VAKAFVEHYYRTFD--TNRAALVGLYQET-SMLTFEGQKFQGPSAIAGKLGSLPFQACEH 437
+ K FV+ YY FD NR ++ Y T S +TFEG + QG I K+ SL FQ
Sbjct: 10 IGKEFVQQYYAIFDDPANRENVINFYNATDSFMTFEGNQIQGAPKILEKVQSLSFQKIAR 69
Query: 436 QIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRLN 263
I TVD QP+ GG+L+ V G ++ ++ P FSQ F L P GS FV +D+FRLN
Sbjct: 70 VITTVDSQPTF-DGGVLIIVLGRLKC-DDDPPHAFSQIFLLKPNGGSLFVAHDIFRLN 125
>sptr|Q8I8H2|Q8I8H2 CG10174 protein.
Length = 130
Score = 84.0 bits (206), Expect = 2e-15
Identities = 51/118 (43%), Positives = 67/118 (56%), Gaps = 3/118 (2%)
Frame = -2
Query: 607 VAKAFVEHYYRTFD--TNRAALVGLYQET-SMLTFEGQKFQGPSAIAGKLGSLPFQACEH 437
+ K FV+ YY FD NR ++ Y T S +TFEG + QG I K+ SL FQ
Sbjct: 10 IGKEFVQQYYAIFDDPANRKNVINFYNATDSFMTFEGNQIQGAPKILEKVQSLSFQKIAR 69
Query: 436 QIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRLN 263
I TVD QP+ GG+L+ V G ++ ++ P FSQ F L P GS FV +D+FRLN
Sbjct: 70 VITTVDSQPTF-DGGVLIIVLGRLKC-DDDPPHAFSQIFLLKPNGGSLFVAHDIFRLN 125
>sptrnew|AAQ02312|AAQ02312 CG10174 protein.
Length = 130
Score = 83.6 bits (205), Expect = 3e-15
Identities = 52/120 (43%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Frame = -2
Query: 613 DAVAKAFVEHYYRTFD--TNRAALVGLYQET-SMLTFEGQKFQGPSAIAGKLGSLPFQAC 443
+ + K FV+ YY FD NR +V Y T S +TFEG++ QG I K+ SL FQ
Sbjct: 8 EKIGKGFVQQYYAIFDDPANRENVVHFYSATDSFMTFEGRQIQGAPKILEKVQSLSFQKI 67
Query: 442 EHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRLN 263
I TVD QP+ GG+L+ V G ++ ++ P FSQ F L P GSF V +D+FRLN
Sbjct: 68 NIVITTVDSQPTF-DGGVLISVLGRLKC-DDDPPHSFSQIFLLKPNGGSFIVAHDIFRLN 125
>sw|O42242|NTF2_XENLA Nuclear transport factor 2 (NTF-2) (P10).
Length = 127
Score = 82.0 bits (201), Expect = 7e-15
Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Frame = -2
Query: 628 MAMDP--DAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLP 455
MA +P + + +F++ YY+TFD +R L +Y + S LT+EGQ++ G +AI KL LP
Sbjct: 1 MAENPIWEQIGASFIQQYYQTFDADRTQLAVIYTDASCLTWEGQQYHGKAAIVEKLSLLP 60
Query: 454 FQACEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIK-FSQAFHLLPAAGSFFVQND 278
FQ +H I + D QP+ P ++ V G ++ ++ PI F Q F L ++ ND
Sbjct: 61 FQKIQHSITSQDHQPT-PDSCIISMVVGQLKA--DDDPIMGFHQVFLLKNIQDAWVCTND 117
Query: 277 MFRL---NYG 257
MFRL N+G
Sbjct: 118 MFRLALHNFG 127
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 520,197,980
Number of Sequences: 1272877
Number of extensions: 11010518
Number of successful extensions: 36852
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36769
length of database: 406,886,216
effective HSP length: 120
effective length of database: 254,140,976
effective search space used: 33292467856
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)