BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440570.2.2
(905 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptr|Q94GV7|Q94GV7 Cytoplasmic ribosomal protein L18. 356 2e-97
sptrnew|BAC83538|BAC83538 Putative cytoplasmic ribosomal protein... 335 7e-91
sptr|Q940B0|Q940B0 Putative 60S ribosomal protein. 315 5e-85
sw|P42791|RL18_ARATH 60S ribosomal protein L18. 314 1e-84
sw|O65729|RL18_CICAR 60S ribosomal protein L18 (Fragment). 301 1e-80
sptr|Q84U89|Q84U89 60S ribosomal protein (Fragment). 266 2e-70
sptr|Q801H3|Q801H3 Ribosomal protein L18 (Fragment). 250 2e-65
sw|Q07020|RL18_HUMAN 60S ribosomal protein L18. 247 1e-64
sptrnew|AAH53773|AAH53773 Hypothetical protein. 246 3e-64
sw|P35980|RL18_MOUSE 60S ribosomal protein L18. 246 3e-64
sw|P12001|RL18_RAT 60S ribosomal protein L18. 246 4e-64
sptrnew|AAH53777|AAH53777 Hypothetical protein. 244 9e-64
sw|Q90YV0|RL18_ICTPU 60S ribosomal protein L18. 243 2e-63
sptr|Q86LX2|Q86LX2 Ribosomal protein L18 (Fragment). 243 3e-63
sw|Q9I836|RL18_OREMO 60S ribosomal protein L18. 243 3e-63
sw|P02412|RL18_XENLA 60S ribosomal protein L18 (L14B). 241 8e-63
sptrnew|EAA27337|EAA27337 Hypothetical protein. 238 8e-62
sptr|Q9VS34|Q9VS34 CG8615 protein (Ribosomal protein L18) (RH018... 237 1e-61
sw|P09897|RLNA_XENLA 60S ribosomal protein L14A. 234 1e-60
sptrnew|EAA04761|EAA04761 AgCP3167 (Fragment). 225 6e-58
sptr|Q98SG3|Q98SG3 Ribosomal protein L18 (Fragment). 225 7e-58
sptrnew|EAA20707|EAA20707 Eukaryotic ribosomal protein L18, puta... 224 1e-57
sptr|Q8TFH1|Q8TFH1 60S ribosomal protein L18. 223 3e-57
sw|Q10192|RL18_SCHPO 60S ribosomal protein L18. 221 8e-57
sw|P07279|RL18_YEAST 60S ribosomal protein L18 (RP28). 220 2e-56
sptr|O45946|O45946 Y45F10D.12 protein. 220 2e-56
sptr|Q962Y8|Q962Y8 Ribosomal protein L18. 218 7e-56
sptr|Q8IDS5|Q8IDS5 60S ribosomal subunit porotein L18, putative. 216 3e-55
sptr|Q801I8|Q801I8 Ribosomal protein L18 (Fragment). 207 2e-52
sptr|O22254|O22254 60S ribosomal protein L18, 5'partial (Fragment). 202 5e-51
>sptr|Q94GV7|Q94GV7 Cytoplasmic ribosomal protein L18.
Length = 188
Score = 356 bits (914), Expect = 2e-97
Identities = 180/188 (95%), Positives = 185/188 (98%), Gaps = 1/188 (0%)
Frame = +2
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGIDLVAGGRNKKTKRTAP+SDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP
Sbjct: 1 MGIDLVAGGRNKKTKRTAPRSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 60
Query: 266 PISMRRLVKFMEGKEKN-IAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGEC 442
P+S+RRL KFMEGKE+N IAVIVGTVTDDKRIQE+P MKVTALRFTETARARIVNAGGEC
Sbjct: 61 PLSLRRLAKFMEGKEENNIAVIVGTVTDDKRIQEIPKMKVTALRFTETARARIVNAGGEC 120
Query: 443 LTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGR 622
LTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGR
Sbjct: 121 LTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGR 180
Query: 623 RNSRGFKV 646
RNSRGFKV
Sbjct: 181 RNSRGFKV 188
>sptrnew|BAC83538|BAC83538 Putative cytoplasmic ribosomal protein
L18.
Length = 195
Score = 335 bits (858), Expect = 7e-91
Identities = 170/195 (87%), Positives = 182/195 (93%), Gaps = 8/195 (4%)
Frame = +2
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGIDLVAGGRNKKTKRTAP+S+DVYLKL+VKLYRFLVRRTKS+FNAVILKRLFMSKTNRP
Sbjct: 1 MGIDLVAGGRNKKTKRTAPRSEDVYLKLIVKLYRFLVRRTKSHFNAVILKRLFMSKTNRP 60
Query: 266 PISMRRLVKFMEGKEKN--------IAVIVGTVTDDKRIQEVPAMKVTALRFTETARARI 421
P+SMRRLV+FMEGK + IAVIVGTVTDDKRI EVPAMKV ALRFTETARARI
Sbjct: 61 PLSMRRLVRFMEGKVPDRHAISGDQIAVIVGTVTDDKRIYEVPAMKVAALRFTETARARI 120
Query: 422 VNAGGECLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRK 601
+NAGGECLTFDQLALRAPLG+NTVLLRGPKNAREAV+HFG APGVPHS+TKPYVRSKGRK
Sbjct: 121 INAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSNTKPYVRSKGRK 180
Query: 602 FEKARGRRNSRGFKV 646
FEKARGRRNS+GFKV
Sbjct: 181 FEKARGRRNSKGFKV 195
>sptr|Q940B0|Q940B0 Putative 60S ribosomal protein.
Length = 187
Score = 315 bits (807), Expect = 5e-85
Identities = 154/187 (82%), Positives = 172/187 (91%)
Frame = +2
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+
Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60
Query: 266 PISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECL 445
P+S+ RLV+FM GK+ IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGECL
Sbjct: 61 PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120
Query: 446 TFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRR 625
TFDQLALRAPLG+NTVLLRGPKN+REAV+HFG APGVPHS+TKPYVR KGRKFEKARG+R
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 180
Query: 626 NSRGFKV 646
SRGFKV
Sbjct: 181 KSRGFKV 187
>sw|P42791|RL18_ARATH 60S ribosomal protein L18.
Length = 187
Score = 314 bits (804), Expect = 1e-84
Identities = 153/187 (81%), Positives = 170/187 (90%)
Frame = +2
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRLFMSK N+
Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60
Query: 266 PISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECL 445
P+S+ RLV+FM GKE IAV+VGT+TDD R+ E+PAMKVTALRFTE ARARI AGGECL
Sbjct: 61 PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120
Query: 446 TFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRR 625
TFDQLALRAPLG+NTVLLRGPKN+REAV+HFG APGVPHSH+KPYVR+KGRKFEKARG+R
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180
Query: 626 NSRGFKV 646
SRGFKV
Sbjct: 181 KSRGFKV 187
>sw|O65729|RL18_CICAR 60S ribosomal protein L18 (Fragment).
Length = 183
Score = 301 bits (770), Expect = 1e-80
Identities = 149/184 (80%), Positives = 166/184 (90%)
Frame = +2
Query: 95 DLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPIS 274
DL AGG+NKKTKRT+PKS+D+YLKLLVKLYRFLVRRT SNFNAVILKRLFMSK NRPP+S
Sbjct: 1 DLKAGGKNKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLS 60
Query: 275 MRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECLTFD 454
+ RL+K+M+GKE I V+VG VTDD R+ +VP +KVTAL+FTETARARI AGGECLTFD
Sbjct: 61 LSRLIKYMQGKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFD 120
Query: 455 QLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSR 634
QLALR PL +TVLLRGPKNAREAV+HFG APGVPHSHTKPYVRSKGRKFEKARGRR SR
Sbjct: 121 QLALRLPL-TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSR 179
Query: 635 GFKV 646
GF+V
Sbjct: 180 GFRV 183
>sptr|Q84U89|Q84U89 60S ribosomal protein (Fragment).
Length = 164
Score = 266 bits (681), Expect = 2e-70
Identities = 130/163 (79%), Positives = 149/163 (91%)
Frame = +2
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGIDL AGG++KKTKRTAPKS+D+YLKLLVKLYRFLVRRT+SNFN VILKRLFMSK N+P
Sbjct: 1 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTESNFNKVILKRLFMSKVNKP 60
Query: 266 PISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECL 445
P+S+ RL+++ +GKE IAV+VG VTDD R+ EVPA+KVTALRFTE ARARI AGGECL
Sbjct: 61 PLSLSRLIRYTKGKEGKIAVVVGAVTDDIRVYEVPAIKVTALRFTEKARARIEKAGGECL 120
Query: 446 TFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTK 574
TFDQLAL+APLG+NTVLLRGPKNAREAV+HFG+APGVPHS TK
Sbjct: 121 TFDQLALKAPLGQNTVLLRGPKNAREAVKHFGRAPGVPHSSTK 163
>sptr|Q801H3|Q801H3 Ribosomal protein L18 (Fragment).
Length = 188
Score = 250 bits (639), Expect = 2e-65
Identities = 125/188 (66%), Positives = 152/188 (80%), Gaps = 2/188 (1%)
Frame = +2
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGID + +++K +RT P+S+D+YL+LLVKLYRFL RRT S FN V+LKRLFMS+TNRP
Sbjct: 1 MGID-IRHNKDRKVRRTEPRSEDIYLRLLVKLYRFLARRTSSPFNKVVLKRLFMSRTNRP 59
Query: 266 PISMRRLVKFME--GKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGE 439
PIS+ RLV+ M+ G+E +AV++GT+TDD RI +P +KV ALR T AR RI+ AGGE
Sbjct: 60 PISIARLVRKMKMGGREGKVAVVIGTITDDPRIFTIPKIKVCALRVTAKARDRILRAGGE 119
Query: 440 CLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARG 619
LT DQLAL +P G+NTVLL GP+ REA RHFG APGVPHSHTKPYVRSKGRKFE+ARG
Sbjct: 120 VLTLDQLALLSPRGQNTVLLSGPRKGREAYRHFGPAPGVPHSHTKPYVRSKGRKFERARG 179
Query: 620 RRNSRGFK 643
RR SRG+K
Sbjct: 180 RRASRGYK 187
>sw|Q07020|RL18_HUMAN 60S ribosomal protein L18.
Length = 187
Score = 247 bits (631), Expect = 1e-64
Identities = 121/187 (64%), Positives = 149/187 (79%), Gaps = 2/187 (1%)
Frame = +2
Query: 89 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPP 268
G+D + +++K +R PKS D+YL+LLVKLYRFL RRT S FN V+LKRLFMS+TNRPP
Sbjct: 1 GVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 59
Query: 269 ISMRRLVKFME--GKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGEC 442
+S+ R+++ M+ G+E AV+VGT+TDD R+QEVP +KV ALR T AR+RI+ AGG+
Sbjct: 60 LSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKI 119
Query: 443 LTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGR 622
LTFDQLAL +P G TVLL GP+ RE RHFGKAPG PHSHTKPYVRSKGRKFE+ARGR
Sbjct: 120 LTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGR 179
Query: 623 RNSRGFK 643
R SRG+K
Sbjct: 180 RASRGYK 186
>sptrnew|AAH53773|AAH53773 Hypothetical protein.
Length = 188
Score = 246 bits (628), Expect = 3e-64
Identities = 120/188 (63%), Positives = 150/188 (79%), Gaps = 2/188 (1%)
Frame = +2
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGID + +++K +R PKS D+YL+LLVKLYRFL RRT S+FN V+LKRLFMS+TNRP
Sbjct: 1 MGID-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNRVVLKRLFMSRTNRP 59
Query: 266 PISMRRLVKFM--EGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGE 439
P+SM RL++ M +G+E AV+VG +TDD RI ++P +KV AL+ T AR+RI+ +GG+
Sbjct: 60 PLSMSRLIRKMKLQGRENKTAVVVGCITDDVRIHDIPKLKVCALKITSGARSRILKSGGQ 119
Query: 440 CLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARG 619
+TFDQLAL AP G+NTVLL GP+ ARE RHFGKAPG PHS TKPYV SKGRKFE+ARG
Sbjct: 120 IMTFDQLALAAPKGQNTVLLSGPRKAREVYRHFGKAPGTPHSRTKPYVLSKGRKFERARG 179
Query: 620 RRNSRGFK 643
RR SRG+K
Sbjct: 180 RRASRGYK 187
>sw|P35980|RL18_MOUSE 60S ribosomal protein L18.
Length = 187
Score = 246 bits (628), Expect = 3e-64
Identities = 121/187 (64%), Positives = 148/187 (79%), Gaps = 2/187 (1%)
Frame = +2
Query: 89 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPP 268
G+D + +++K +R PKS D+YL+LLVKLYRFL RRT S FN V+LKRLFMS+TNRPP
Sbjct: 1 GVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 59
Query: 269 ISMRRLVKFME--GKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGEC 442
+S+ R+++ M+ G+E AV+VGTVTDD RI EVP +KV ALR + AR+RI+ AGG+
Sbjct: 60 LSLSRMIRKMKLPGRENKTAVVVGTVTDDVRILEVPKLKVCALRVSSRARSRILKAGGKI 119
Query: 443 LTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGR 622
LTFDQLAL +P G TVLL GP+ RE RHFGKAPG PHSHTKPYVRSKGRKFE+ARGR
Sbjct: 120 LTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGR 179
Query: 623 RNSRGFK 643
R SRG+K
Sbjct: 180 RASRGYK 186
>sw|P12001|RL18_RAT 60S ribosomal protein L18.
Length = 187
Score = 246 bits (627), Expect = 4e-64
Identities = 120/187 (64%), Positives = 148/187 (79%), Gaps = 2/187 (1%)
Frame = +2
Query: 89 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPP 268
G+D + +++K +R PKS D+YL+LLVKLYRFL RRT S FN V+LKRLFMS+TNRPP
Sbjct: 1 GVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 59
Query: 269 ISMRRLVKFME--GKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGEC 442
+S+ R+++ M+ G+E AV+VGT+TDD RI EVP +KV ALR + AR+RI+ AGG+
Sbjct: 60 LSLSRMIRKMKLPGRENKTAVVVGTITDDVRILEVPKLKVCALRVSSRARSRILKAGGKI 119
Query: 443 LTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGR 622
LTFDQLAL +P G TVLL GP+ RE RHFGKAPG PHSHTKPYVRSKGRKFE+ARGR
Sbjct: 120 LTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGR 179
Query: 623 RNSRGFK 643
R SRG+K
Sbjct: 180 RASRGYK 186
>sptrnew|AAH53777|AAH53777 Hypothetical protein.
Length = 188
Score = 244 bits (624), Expect = 9e-64
Identities = 120/188 (63%), Positives = 149/188 (79%), Gaps = 2/188 (1%)
Frame = +2
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGID + +++K +R PKS D+YL+LLVKLYRFL RRT S+FN V+LKRLFMS+TNRP
Sbjct: 1 MGID-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNRVVLKRLFMSRTNRP 59
Query: 266 PISMRRLVKFME--GKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGE 439
P+SM RL++ M+ G+E AV+VG +TDD RI ++P + V AL+ T AR+RI+ AGG+
Sbjct: 60 PLSMSRLIRKMKLPGRENKTAVVVGCITDDVRIHDIPKLTVCALKLTSGARSRILKAGGQ 119
Query: 440 CLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARG 619
+TFDQLAL AP G+NTVLL GP+ ARE RHFGKAPG PHS TKPYV SKGRKFE+ARG
Sbjct: 120 IMTFDQLALAAPKGQNTVLLSGPRKAREVYRHFGKAPGTPHSRTKPYVLSKGRKFERARG 179
Query: 620 RRNSRGFK 643
RR SRG+K
Sbjct: 180 RRASRGYK 187
>sw|Q90YV0|RL18_ICTPU 60S ribosomal protein L18.
Length = 187
Score = 243 bits (621), Expect = 2e-63
Identities = 118/187 (63%), Positives = 148/187 (79%), Gaps = 2/187 (1%)
Frame = +2
Query: 89 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPP 268
G+D + +++K RT PKS D+YL+LLVKLYRFL RR+ + FN V+LKRLFMSKTNRPP
Sbjct: 1 GVD-IRHNKDRKVHRTEPKSQDIYLRLLVKLYRFLARRSDAPFNKVVLKRLFMSKTNRPP 59
Query: 269 ISMRRLVKFM--EGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGEC 442
+++ RL++ M +G+E IAV+VGT+TDD RI +P +KV ALR T AR RI+ AGG+
Sbjct: 60 LALSRLIRKMKLQGRENKIAVVVGTITDDVRILNIPKLKVCALRVTAGARRRILKAGGQV 119
Query: 443 LTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGR 622
+TFDQLA+ P G+ TVLL GP+ ARE RHFGKAPG PHSHTKPY+RSKGRKFE+ARGR
Sbjct: 120 MTFDQLAVTTPKGQGTVLLSGPRKAREVYRHFGKAPGTPHSHTKPYIRSKGRKFERARGR 179
Query: 623 RNSRGFK 643
R SRG+K
Sbjct: 180 RASRGYK 186
>sptr|Q86LX2|Q86LX2 Ribosomal protein L18 (Fragment).
Length = 188
Score = 243 bits (620), Expect = 3e-63
Identities = 118/188 (62%), Positives = 153/188 (81%), Gaps = 2/188 (1%)
Frame = +2
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGID + R+++ +R PKS+D+YL+LLVKLYRFL RRT + FN V+L+RLFMS+TNRP
Sbjct: 1 MGID-IDHRRDRRVRRKEPKSEDIYLRLLVKLYRFLARRTNAKFNQVVLERLFMSRTNRP 59
Query: 266 PISMRRLVKFME--GKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGE 439
P+S+ RL++ M+ G+E AV+VGT+TDD RI E+P +K+ LR TE ARA+I+ AGGE
Sbjct: 60 PMSIARLIRLMKKPGREGKTAVVVGTITDDVRIFEIPKLKICCLRVTEGARAKILKAGGE 119
Query: 440 CLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARG 619
+TFDQLALR+P G+NTVL++G + ARE RH+G APGVPHSHTKP+VRSKGRKFE+ARG
Sbjct: 120 IITFDQLALRSPKGKNTVLIQGQRRARETCRHWGPAPGVPHSHTKPFVRSKGRKFERARG 179
Query: 620 RRNSRGFK 643
RR S G+K
Sbjct: 180 RRKSCGYK 187
>sw|Q9I836|RL18_OREMO 60S ribosomal protein L18.
Length = 187
Score = 243 bits (619), Expect = 3e-63
Identities = 118/187 (63%), Positives = 150/187 (80%), Gaps = 2/187 (1%)
Frame = +2
Query: 89 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPP 268
G+D + +++K R PKS D+YL+LLVKLYRFL RR+ + FN V+L+RLFMS+TNRPP
Sbjct: 1 GVD-IRHNKDRKVHRKEPKSQDIYLRLLVKLYRFLARRSNAPFNRVVLRRLFMSRTNRPP 59
Query: 269 ISMRRLVKFME--GKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGEC 442
I++ RL++ M+ G+E IAV+VGTVTDD RIQ++P +K+ ALR T+ AR RI+ AGG+
Sbjct: 60 IAVSRLIRKMKLPGRENKIAVVVGTVTDDVRIQDIPKLKICALRVTDGARRRILKAGGQV 119
Query: 443 LTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGR 622
+TFDQLAL +P G+ TVLL GP+ ARE RHFGKAPG PHSHTKPYVRSKGRKFE+ARGR
Sbjct: 120 MTFDQLALASPKGQGTVLLSGPRKAREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGR 179
Query: 623 RNSRGFK 643
R S G+K
Sbjct: 180 RASCGYK 186
>sw|P02412|RL18_XENLA 60S ribosomal protein L18 (L14B).
Length = 187
Score = 241 bits (616), Expect = 8e-63
Identities = 118/187 (63%), Positives = 148/187 (79%), Gaps = 2/187 (1%)
Frame = +2
Query: 89 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPP 268
GID + +++K +R PKS D+YL+LLVKLYRFL RRT S+FN V+LKRLFMS+TNRPP
Sbjct: 1 GID-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNRVVLKRLFMSRTNRPP 59
Query: 269 ISMRRLVKFM--EGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGEC 442
+SM RL++ M +G+E AV+VG +TDD RI ++P +KV AL+ T R+RI+ +GG+
Sbjct: 60 LSMSRLIRKMKLQGRENKTAVVVGYITDDVRIHDIPKLKVCALKITSGDRSRILKSGGQI 119
Query: 443 LTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGR 622
+TFDQLAL AP G+NTVLL GP+ ARE RHFGKAPG PHS TKPYV SKGRKFE+ARGR
Sbjct: 120 MTFDQLALAAPKGQNTVLLSGPRKAREVYRHFGKAPGTPHSRTKPYVLSKGRKFERARGR 179
Query: 623 RNSRGFK 643
R SRG+K
Sbjct: 180 RASRGYK 186
>sptrnew|EAA27337|EAA27337 Hypothetical protein.
Length = 183
Score = 238 bits (607), Expect = 8e-62
Identities = 124/187 (66%), Positives = 142/187 (75%)
Frame = +2
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGIDL + T R APKSD+VYLKLLVKLYRFL RRT S FN V+L+RLFMS+ NRP
Sbjct: 1 MGIDL-RKHHERSTHRKAPKSDNVYLKLLVKLYRFLARRTDSAFNKVVLRRLFMSRINRP 59
Query: 266 PISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECL 445
P+S+ R+V ++G EK V+VGTVTDD R+ VP + V ALRFT TARARI AGG+ +
Sbjct: 60 PMSISRIVANLKGNEKKTVVVVGTVTDDNRLLTVPKVSVAALRFTATARARIEAAGGQAI 119
Query: 446 TFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRR 625
T DQLAL P G NT+LLRGPKNAREAV+HFG PH H KPYV SKGRKFEKARGRR
Sbjct: 120 TLDQLALEKPTGANTLLLRGPKNAREAVKHFGFG---PHKHKKPYVASKGRKFEKARGRR 176
Query: 626 NSRGFKV 646
S+GFKV
Sbjct: 177 RSKGFKV 183
>sptr|Q9VS34|Q9VS34 CG8615 protein (Ribosomal protein L18)
(RH01814p).
Length = 188
Score = 237 bits (605), Expect = 1e-61
Identities = 119/188 (63%), Positives = 149/188 (79%), Gaps = 2/188 (1%)
Frame = +2
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGID + ++K +RT PKS DVYL+LLVKLYRFL RRT FN +ILKRLFMSK NRP
Sbjct: 1 MGID-INHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRP 59
Query: 266 PISMRRLVKFMEG--KEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGE 439
P+S++R+ +F + + ++ V+VGTVTDD R+ VP + V AL T+TAR RI+ AGGE
Sbjct: 60 PLSLQRIARFFKAANQPESTIVVVGTVTDDARLLVVPKLTVCALHVTQTARERILKAGGE 119
Query: 440 CLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARG 619
LTFDQLALR+P G+NT+LL+G + AR A +HFGKAPGVPHSHT+PYVRSKGRKFE+ARG
Sbjct: 120 VLTFDQLALRSPTGKNTLLLQGRRTARTACKHFGKAPGVPHSHTRPYVRSKGRKFERARG 179
Query: 620 RRNSRGFK 643
RR+S G+K
Sbjct: 180 RRSSCGYK 187
>sw|P09897|RLNA_XENLA 60S ribosomal protein L14A.
Length = 187
Score = 234 bits (597), Expect = 1e-60
Identities = 116/187 (62%), Positives = 145/187 (77%), Gaps = 2/187 (1%)
Frame = +2
Query: 89 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPP 268
GID + +++K +R PKS D+YL+LLVKLYRFL RRT S+FN V+LKRLFMS+TNRPP
Sbjct: 1 GID-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNRVVLKRLFMSRTNRPP 59
Query: 269 ISMRRLVKFME--GKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGEC 442
+SM RL++ M+ +E AV+VG +T D RI ++P + V AL+ T AR+RI+ AGG+
Sbjct: 60 LSMSRLIRKMKLPRRENKTAVVVGCITADVRIHDIPKLTVCALKLTSGARSRILKAGGQI 119
Query: 443 LTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGR 622
+TFDQLAL AP G+NTVLL GP+ ARE RHFGKAP PHS TKPYV SKGRKFE+ARGR
Sbjct: 120 MTFDQLALAAPKGQNTVLLSGPRKAREVYRHFGKAPSTPHSRTKPYVLSKGRKFERARGR 179
Query: 623 RNSRGFK 643
R SRG+K
Sbjct: 180 RASRGYK 186
>sptrnew|EAA04761|EAA04761 AgCP3167 (Fragment).
Length = 202
Score = 225 bits (574), Expect = 6e-58
Identities = 113/189 (59%), Positives = 148/189 (78%), Gaps = 3/189 (1%)
Frame = +2
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGID + ++K +RT PKS DVYL LLVKLYRFL RRTK FN ++++RLFMS+TN P
Sbjct: 14 MGID-INHKWDRKVRRTRPKSLDVYLSLLVKLYRFLYRRTKKKFNKIVMRRLFMSRTNHP 72
Query: 266 PISMRRLVKFME--GK-EKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGG 436
P+S+ R+ M+ GK EK++AV++GTVT+D R+ +VP + V ALR T+ AR RI+ GG
Sbjct: 73 PMSLNRVAHLMKLRGKDEKSVAVVIGTVTNDVRMMDVPKLNVCALRVTDKARQRILKNGG 132
Query: 437 ECLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKAR 616
+ TFDQLAL +P G NTVL++G + ARE +HFG+APGVPHS+T+PYV+SKGRKFEKAR
Sbjct: 133 KIYTFDQLALLSPTGRNTVLMQGKRTAREVFKHFGRAPGVPHSNTRPYVQSKGRKFEKAR 192
Query: 617 GRRNSRGFK 643
GRR+S G+K
Sbjct: 193 GRRSSCGYK 201
>sptr|Q98SG3|Q98SG3 Ribosomal protein L18 (Fragment).
Length = 180
Score = 225 bits (573), Expect = 7e-58
Identities = 108/179 (60%), Positives = 140/179 (78%), Gaps = 2/179 (1%)
Frame = +2
Query: 113 RNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPISMRRLVK 292
+++K + PKS D+YL+LL KLYRFL RR+ + FN V+L+ LFMS+T+RPP+S+ R+++
Sbjct: 2 KDRKVRPKEPKSQDIYLRLLDKLYRFLARRSTAPFNKVVLRWLFMSRTHRPPMSVSRMIR 61
Query: 293 FME--GKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECLTFDQLAL 466
M+ G+E AV+VGTVTDD RIQ++P +KV AL+ T R RI+ AGG+ +TFDQLAL
Sbjct: 62 KMKLPGRENRTAVVVGTVTDDVRIQDIPKLKVCALKVTRRLRTRILKAGGQIMTFDQLAL 121
Query: 467 RAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 643
AP G+ TVLL GP+ A + RHFGK PG PHSHTKPYVRSKGRKFE+ARGRR SRG+K
Sbjct: 122 AAPKGQGTVLLSGPRKAPDVSRHFGKVPGTPHSHTKPYVRSKGRKFERARGRRASRGYK 180
>sptrnew|EAA20707|EAA20707 Eukaryotic ribosomal protein L18,
putative.
Length = 243
Score = 224 bits (572), Expect = 1e-57
Identities = 116/186 (62%), Positives = 137/186 (73%)
Frame = +2
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGIDL GR KK R S + YL+LLVKLYRFL RRT NFN +I KRL M K RP
Sbjct: 57 MGIDLKNVGRIKKHGRKNLVSKNPYLRLLVKLYRFLARRTDVNFNKIIAKRLIMPKRFRP 116
Query: 266 PISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECL 445
P+S+ +L + M + ++AV+VG++TDDKR+ MKV ALRFTETAR RIV+AGGECL
Sbjct: 117 PLSLSKLQQHMSNNQNSVAVVVGSITDDKRLFSCRNMKVCALRFTETARKRIVDAGGECL 176
Query: 446 TFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRR 625
TFDQLALR P G++ +LLRGP AR A +HFG APG P S +PYVRSKGRKFEKARGRR
Sbjct: 177 TFDQLALRYPTGKDCILLRGPTKARTAEKHFGSAPGRPKSKARPYVRSKGRKFEKARGRR 236
Query: 626 NSRGFK 643
SR +K
Sbjct: 237 KSRAYK 242
>sptr|Q8TFH1|Q8TFH1 60S ribosomal protein L18.
Length = 187
Score = 223 bits (568), Expect = 3e-57
Identities = 120/191 (62%), Positives = 141/191 (73%), Gaps = 4/191 (2%)
Frame = +2
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGID + +K++R+ P S++VYLKLLVKLYRFL RRT S FN ILKRLF SKTNRP
Sbjct: 1 MGID-IERHHVRKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRP 59
Query: 266 PISMRRLVKFMEGKEKNI----AVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAG 433
PIS+ ++ K ++ VIVGTVTDD+R+ VP + V ALRFT++ARARI+ AG
Sbjct: 60 PISISKIAALTSRKSASLEGKTTVIVGTVTDDERLLTVPKLSVAALRFTKSARARILKAG 119
Query: 434 GECLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKA 613
GE LT DQLALRAP G NTVLLRG K+AREA RHFG PH H PYVRS+GRKFE+A
Sbjct: 120 GEVLTLDQLALRAPTGSNTVLLRGKKHAREAYRHFGFG---PHKHKAPYVRSEGRKFERA 176
Query: 614 RGRRNSRGFKV 646
RGRR SR FKV
Sbjct: 177 RGRRKSRAFKV 187
>sw|Q10192|RL18_SCHPO 60S ribosomal protein L18.
Length = 187
Score = 221 bits (564), Expect = 8e-57
Identities = 118/191 (61%), Positives = 140/191 (73%), Gaps = 4/191 (2%)
Frame = +2
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGID + KK++R+ P S++VYLKLLVKLYRFL RRT S FN ILKRLF SKTNRP
Sbjct: 1 MGID-IERHHVKKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRP 59
Query: 266 PISMRRLVKFMEGK----EKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAG 433
PIS+ ++ K + V+VGTVTDD+R+ VP + + ALRFT++ARARI+ AG
Sbjct: 60 PISISKIAALTSRKSASSQNKTTVVVGTVTDDERMLTVPKLSIAALRFTKSARARILKAG 119
Query: 434 GECLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKA 613
GE LT DQLALRAP G NTVL+RG K+AREA RHFG PH H PYVRS+GRKFE+A
Sbjct: 120 GEVLTLDQLALRAPTGSNTVLVRGKKHAREAYRHFGFG---PHKHKAPYVRSEGRKFERA 176
Query: 614 RGRRNSRGFKV 646
RGRR SR FKV
Sbjct: 177 RGRRKSRAFKV 187
>sw|P07279|RL18_YEAST 60S ribosomal protein L18 (RP28).
Length = 186
Score = 220 bits (560), Expect = 2e-56
Identities = 114/189 (60%), Positives = 137/189 (72%), Gaps = 2/189 (1%)
Frame = +2
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGID + + RTAPKSD+VYLKLLVKLY FL RRT + FN V+LK LF+SK NRP
Sbjct: 1 MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRP 60
Query: 266 PISMRRLVKFM--EGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGE 439
P+S+ R+ + + EG V+VGTVTDD RI E P V ALRFT ARA+IV AGGE
Sbjct: 61 PVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGE 120
Query: 440 CLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARG 619
C+T DQLA+RAP G+NT++LRGP+N+REAVRHFG PH P + S GRKFE+ARG
Sbjct: 121 CITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMG---PHKGKAPRILSTGRKFERARG 177
Query: 620 RRNSRGFKV 646
RR S+GFKV
Sbjct: 178 RRRSKGFKV 186
>sptr|O45946|O45946 Y45F10D.12 protein.
Length = 188
Score = 220 bits (560), Expect = 2e-56
Identities = 112/188 (59%), Positives = 141/188 (75%), Gaps = 2/188 (1%)
Frame = +2
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGID + ++ +RTAPKS++ YL+LL KLY FL RRT FNA++LKRL MS+ NR
Sbjct: 1 MGID-INHKHDRVARRTAPKSENPYLRLLSKLYAFLARRTGEKFNAIVLKRLRMSRRNRQ 59
Query: 266 PISMRRLVKFME--GKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGE 439
P+S+ +L + ++ G E V + TVTDD R+ VP + V AL TE ARARI+ AGGE
Sbjct: 60 PLSLAKLARAVQKAGNENKTVVTLSTVTDDARLYTVPKISVAALHVTEGARARILAAGGE 119
Query: 440 CLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARG 619
+T DQLAL++P GENTV L+GP++AREA +HFG APGVPHSHTKPYVRSKGRKFE+ARG
Sbjct: 120 IITLDQLALKSPKGENTVFLQGPRSAREAEKHFGPAPGVPHSHTKPYVRSKGRKFERARG 179
Query: 620 RRNSRGFK 643
RR SR +K
Sbjct: 180 RRASRAYK 187
>sptr|Q962Y8|Q962Y8 Ribosomal protein L18.
Length = 183
Score = 218 bits (556), Expect = 7e-56
Identities = 116/184 (63%), Positives = 140/184 (76%), Gaps = 2/184 (1%)
Frame = +2
Query: 86 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 265
MGID + ++K +RT KS DVYL+LLVKLYR+L RRT S FN +IL+RLFMS+ NRP
Sbjct: 1 MGID-INHKHDRKVRRTEVKSQDVYLRLLVKLYRYLARRTNSKFNTIILRRLFMSRINRP 59
Query: 266 PISMRRLVKFMEG--KEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGE 439
P+S+ RL + M+ +E IAV+VGT+T+D R+ +VP M V AL TE ARARI+ AGGE
Sbjct: 60 PLSLSRLARHMKKPTREGMIAVVVGTITNDVRLYKVPKMSVAALHVTEKARARILAAGGE 119
Query: 440 CLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARG 619
LTFDQLALRAP G TVLL+G +NAREAVRHFG APG P SHTKPYVR+KG E+AR
Sbjct: 120 ILTFDQLALRAPTGAKTVLLQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--ERARP 177
Query: 620 RRNS 631
RR S
Sbjct: 178 RRRS 181
>sptr|Q8IDS5|Q8IDS5 60S ribosomal subunit porotein L18, putative.
Length = 193
Score = 216 bits (550), Expect = 3e-55
Identities = 113/185 (61%), Positives = 133/185 (71%)
Frame = +2
Query: 89 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPP 268
GI L GR KK R S + YL+LLVKLY FL RRT +NFN +I KRL M K RPP
Sbjct: 8 GIALKNVGRIKKHGRKHLVSKNPYLRLLVKLYNFLARRTNANFNKIIAKRLIMPKRYRPP 67
Query: 269 ISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECLT 448
+S+ +L M +IAV+VG++TDDKR+ + +KV ALRFTETAR RI +AGGECLT
Sbjct: 68 LSLSKLQYHMANHPNDIAVVVGSITDDKRLFSLKQLKVCALRFTETARKRIEDAGGECLT 127
Query: 449 FDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRN 628
FDQLAL+ P G+ VLLRGP AR A +HFGKAPG P S +PYVRSKGRKFEKARGRR
Sbjct: 128 FDQLALKYPTGKKCVLLRGPTKARTAEKHFGKAPGKPKSKARPYVRSKGRKFEKARGRRK 187
Query: 629 SRGFK 643
SR +K
Sbjct: 188 SRAYK 192
>sptr|Q801I8|Q801I8 Ribosomal protein L18 (Fragment).
Length = 165
Score = 207 bits (526), Expect = 2e-52
Identities = 100/165 (60%), Positives = 124/165 (75%), Gaps = 2/165 (1%)
Frame = +2
Query: 122 KTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPISMRRLVKFME 301
K +R PKS D+YL+LLVKLYRFL RR+ N V+LKRLF S+TNRPP+S+ RL++ M
Sbjct: 1 KVRRKEPKSQDIYLRLLVKLYRFLARRSPGALNKVVLKRLFTSRTNRPPLSLARLIRKMR 60
Query: 302 --GKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIVNAGGECLTFDQLALRAP 475
G+E AV+VG + DD R +VP +KV ALR T+ AR RI+ AGG+ +TFDQLAL +P
Sbjct: 61 MPGREGKTAVVVGAIMDDVRTFDVPKLKVCALRVTDVARHRILKAGGQIMTFDQLALASP 120
Query: 476 LGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEK 610
G+ TVLL GP+ RE RHFG APG PHSHTKPY+RSKGRKFE+
Sbjct: 121 KGQGTVLLSGPRKGREVYRHFGPAPGAPHSHTKPYIRSKGRKFER 165
>sptr|O22254|O22254 60S ribosomal protein L18, 5'partial (Fragment).
Length = 135
Score = 202 bits (514), Expect = 5e-51
Identities = 101/135 (74%), Positives = 114/135 (84%), Gaps = 1/135 (0%)
Frame = +2
Query: 245 MSKTNRPPISMRRLVKFMEGKEKNIAVIVGTVTDDKRIQEVPAMKVTALRFTETARARIV 424
MSK N+ P+S+ RLV++M+GK+ IAVIVGTVTDD RI++VPA+ VTALRFTE+ARARI
Sbjct: 1 MSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIH 60
Query: 425 NAGGECLTFDQLALRAPL-GENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRK 601
AGGECLTFDQLAL P ENTVLLRGPKN REAV+HFG APGVPHSHTKPYVR G+K
Sbjct: 61 KAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKK 120
Query: 602 FEKARGRRNSRGFKV 646
E ARGRR SRGFKV
Sbjct: 121 IEIARGRRRSRGFKV 135
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 704,330,708
Number of Sequences: 1272877
Number of extensions: 16044068
Number of successful extensions: 51826
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51755
length of database: 406,886,216
effective HSP length: 122
effective length of database: 251,595,222
effective search space used: 45035544738
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)