BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2405110.2.1
(945 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptr|Q8S1Y5|Q8S1Y5 Putative ubiquitin conjugating enzyme (EC 6.3... 316 3e-85
sptr|Q43780|Q43780 Ubiquitin conjugating enzyme (EC 6.3.2.19) (U... 238 7e-62
sptr|Q9FI61|Q9FI61 Putative ubiquitin-conjugating enzyme protein... 226 3e-58
sptr|Q8T0Z6|Q8T0Z6 Ubiquitin conjugating enzyme-like protein (EC... 163 4e-39
sw|P52486|UBC4_DROME Ubiquitin-conjugating enzyme E2-22 kDa (EC ... 156 5e-37
sptr|P91633|P91633 UBCD4 protein (EC 6.3.2.19) (LD27480P) (Ubiqu... 154 1e-36
sptr|Q8AVM8|Q8AVM8 Similar to huntingtin interacting protein 2. 154 2e-36
sptr|Q8IDD9|Q8IDD9 Ubiquitin-conjugating enzyme, putative. 152 7e-36
sptrnew|EAA44469|EAA44469 ENSANGP00000023498. 152 9e-36
sptr|Q9TZ69|Q9TZ69 F40G9.3 protein (EC 6.3.2.19) (Ubiquitin-conj... 150 3e-35
sptrnew|BAC33269|BAC33269 16 days embryo head cDNA, RIKEN full-l... 150 3e-35
sptrnew|BAC29296|BAC29296 16 days neonate cerebellum cDNA, RIKEN... 150 3e-35
sw|P27924|UBC1_HUMAN Ubiquitin-conjugating enzyme E2-25 kDa (EC ... 150 3e-35
sptrnew|EAA20958|EAA20958 Ubiquitin conjugating enzyme. 148 1e-34
sw|P21734|UBC1_YEAST Ubiquitin-conjugating enzyme E2-24 kDa (EC ... 140 3e-32
sptr|O74810|O74810 Ubiquitin-conjugating enzyme E2 (EC 6.3.2.19)... 136 4e-31
sptr|Q42045|Q42045 Ubiquitin-conjugating enzyme E2 (EC 6.3.2.19)... 136 5e-31
sptrnew|EAA32355|EAA32355 Hypothetical protein ( probable ubiqui... 135 8e-31
sptr|Q9P725|Q9P725 Probable ubiquitin--protein ligase (EC 6.3.2.... 135 8e-31
sw|P52484|UBC8_CAEEL Probable ubiquitin-conjugating enzyme E2-29... 134 1e-30
sw|P15731|UBC4_YEAST Ubiquitin-conjugating enzyme E2 4 (EC 6.3.2... 114 2e-24
sptr|O48555|O48555 Ubiquitin conjugating enzyme (EC 6.3.2.19) (U... 113 3e-24
sptr|Q8L458|Q8L458 Ubiquitin conjugating enzyme (EC 6.3.2.19) (U... 113 4e-24
sptr|Q8S920|Q8S920 Ubiquitin-conjugating enzyme OsUBC5a (EC 6.3.... 111 1e-23
sptrnew|EAA09707|EAA09707 ENSANGP00000013066 (Fragment). 111 1e-23
sptr|Q9SH72|Q9SH72 F22C12.2 (EC 6.3.2.19) (Ubiquitin-conjugating... 110 2e-23
sptr|Q94DA8|Q94DA8 P0694A04.26 protein (EC 6.3.2.19) (P0684E06.1... 110 2e-23
sptr|Q43821|Q43821 Ubiquitin conjugating enzyme (EC 6.3.2.19) (U... 110 3e-23
sptr|Q9SLE4|Q9SLE4 Putative ubiquitin-conjugating enzyme E2 (EC ... 110 3e-23
sptr|Q42897|Q42897 Ubiquitin-conjugating enzyme E2 (EC 6.3.2.19)... 110 4e-23
>sptr|Q8S1Y5|Q8S1Y5 Putative ubiquitin conjugating enzyme (EC
6.3.2.19) (Ubiquitin- conjugating enzyme E2)
(Ubiquitin-protein ligase) (Ubiquitin carrier protein).
Length = 195
Score = 316 bits (810), Expect = 3e-85
Identities = 155/188 (82%), Positives = 161/188 (85%)
Frame = -1
Query: 837 QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP 658
QKELTECNRDREVSGVSIALHDG+ ISHLTGTIAGP +PYEGGTFVIDIRLPGGYPFEP
Sbjct: 8 QKELTECNRDREVSGVSIALHDGSTISHLTGTIAGPQGTPYEGGTFVIDIRLPGGYPFEP 67
Query: 657 PKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVV 478
PKMQFITKVWHPNISSQNGAICLDILKDQW PDDPQDAVV
Sbjct: 68 PKMQFITKVWHPNISSQNGAICLDILKDQWSPALTLKTALLSLQALLSAPAPDDPQDAVV 127
Query: 477 AQQYLRDYPTFAATARYWTEAFAKSASTGMEEKVQKLVEMGFPEDQVRSALKSVDGDENM 298
AQQYLRDY TF+ATARYWTEAFAK++STGMEEKVQKLVEMGFPED VRS LKSV+GDENM
Sbjct: 128 AQQYLRDYSTFSATARYWTEAFAKNSSTGMEEKVQKLVEMGFPEDMVRSVLKSVNGDENM 187
Query: 297 ALEKLCSG 274
ALEKLCSG
Sbjct: 188 ALEKLCSG 195
>sptr|Q43780|Q43780 Ubiquitin conjugating enzyme (EC 6.3.2.19)
(Ubiquitin-conjugating enzyme E2) (Ubiquitin-protein
ligase) (Ubiquitin carrier protein).
Length = 194
Score = 238 bits (608), Expect = 7e-62
Identities = 118/187 (63%), Positives = 138/187 (73%)
Frame = -1
Query: 837 QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP 658
QKEL ECNRD +VSG+++ L G +++HL GTI GP +PYEGGTF IDI L GYPFEP
Sbjct: 8 QKELHECNRDVQVSGINVTLK-GDSLTHLIGTIPGPVGTPYEGGTFKIDITLTDGYPFEP 66
Query: 657 PKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVV 478
PKM+F TKVWHPNISSQ+GAICLDILKDQW PDDPQDAVV
Sbjct: 67 PKMKFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSIQALLSAPEPDDPQDAVV 126
Query: 477 AQQYLRDYPTFAATARYWTEAFAKSASTGMEEKVQKLVEMGFPEDQVRSALKSVDGDENM 298
AQQYLR++ TF TARYWTE FAK+++ ++K+QKLVEMGFPE QVRS L++ DENM
Sbjct: 127 AQQYLREHQTFVGTARYWTETFAKTSTLAADDKIQKLVEMGFPEAQVRSTLEANGWDENM 186
Query: 297 ALEKLCS 277
ALEKL S
Sbjct: 187 ALEKLLS 193
>sptr|Q9FI61|Q9FI61 Putative ubiquitin-conjugating enzyme protein
(EC 6.3.2.19) (Ubiquitin-conjugating enzyme E2)
(Ubiquitin-protein ligase) (Ubiquitin carrier protein).
Length = 192
Score = 226 bits (577), Expect = 3e-58
Identities = 112/187 (59%), Positives = 136/187 (72%)
Frame = -1
Query: 837 QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP 658
QKEL +C R+++ SG+ + N++ LTGTI GP +PYEGGTF IDI +P GYPFEP
Sbjct: 8 QKELQDCERNQDSSGIRVCPKSD-NLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEP 66
Query: 657 PKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVV 478
PKMQF TKVWHPNISSQ+GAICLDILKDQW P DPQDAVV
Sbjct: 67 PKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQDAVV 126
Query: 477 AQQYLRDYPTFAATARYWTEAFAKSASTGMEEKVQKLVEMGFPEDQVRSALKSVDGDENM 298
A+QY+++Y F +TARYWTE FAK +S +EEKV++LVEMGF + QVRSA++S GDEN+
Sbjct: 127 AEQYMKNYQVFVSTARYWTETFAKKSS--LEEKVKRLVEMGFGDAQVRSAIESSGGDENL 184
Query: 297 ALEKLCS 277
ALEKLCS
Sbjct: 185 ALEKLCS 191
>sptr|Q8T0Z6|Q8T0Z6 Ubiquitin conjugating enzyme-like protein (EC
6.3.2.19) (Ubiquitin- conjugating enzyme E2)
(Ubiquitin-protein ligase) (Ubiquitin carrier protein).
Length = 199
Score = 163 bits (412), Expect = 4e-39
Identities = 86/188 (45%), Positives = 113/188 (60%), Gaps = 3/188 (1%)
Frame = -1
Query: 837 QKELTECNRDREVSGVSIALH-DGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFE 661
++E E + EV G SI L N + L G IAGP D+PYEGGTF+++I++P YPF
Sbjct: 10 KREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFN 69
Query: 660 PPKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAV 481
PPK++F+TK+WHPN+SS GAICLDILKDQW P+DPQDAV
Sbjct: 70 PPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPNDPQDAV 129
Query: 480 VAQQYLRDYPTFAATARYWTEAFAKSASTGME--EKVQKLVEMGFPEDQVRSALKSVDGD 307
VA+Q+ + F TAR+WT +A + E KVQ++++MG E Q R AL S D D
Sbjct: 130 VAKQFRENPRLFTMTARHWTNVYAGGPNIVHECNSKVQRMLDMGIDEHQARVALSSYDWD 189
Query: 306 ENMALEKL 283
A E+L
Sbjct: 190 LERATEQL 197
>sw|P52486|UBC4_DROME Ubiquitin-conjugating enzyme E2-22 kDa (EC
6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier
protein).
Length = 199
Score = 156 bits (394), Expect = 5e-37
Identities = 83/191 (43%), Positives = 107/191 (56%), Gaps = 3/191 (1%)
Frame = -1
Query: 837 QKELTECNRDREVSGVSIALH-DGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFE 661
++E E R E+ SI + ++ L G IAGP D+PYEGG FV++I++P YPF
Sbjct: 10 KREFKEVMRSEEIVQCSIKIELVNGQLTELRGEIAGPPDTPYEGGKFVLEIKVPETYPFN 69
Query: 660 PPKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAV 481
PPK +FIT++WHPNISS GAICLDILKD W PDDPQDAV
Sbjct: 70 PPKARFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAV 129
Query: 480 VAQQYLRDYPTFAATARYWTEAFAKSAST--GMEEKVQKLVEMGFPEDQVRSALKSVDGD 307
VA Q+ Y F TA++WT A+A T + K+Q+L +MG E + R+ L
Sbjct: 130 VAYQFKDKYDLFLLTAKHWTNAYAGGPHTFPDCDSKIQRLRDMGIDEHEARAVLSK---- 185
Query: 306 ENMALEKLCSG 274
EN LEK G
Sbjct: 186 ENWNLEKATEG 196
>sptr|P91633|P91633 UBCD4 protein (EC 6.3.2.19) (LD27480P)
(Ubiquitin-conjugating enzyme E2) (Ubiquitin-protein
ligase) (Ubiquitin carrier protein).
Length = 199
Score = 154 bits (390), Expect = 1e-36
Identities = 83/191 (43%), Positives = 108/191 (56%), Gaps = 3/191 (1%)
Frame = -1
Query: 837 QKELTECNRDREVSGVSIALH-DGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFE 661
++E E R E+ SI + + + L G IAGP D+PYEGG FV++I++P YPF
Sbjct: 10 KREFKEVMRSEEIVQCSIKIELVNDSWTELRGEIAGPPDTPYEGGKFVLEIKVPETYPFN 69
Query: 660 PPKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAV 481
PPK++FIT++WHPNISS GAICLDILKD W PDDPQDAV
Sbjct: 70 PPKVRFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAV 129
Query: 480 VAQQYLRDYPTFAATARYWTEAFAKSAST--GMEEKVQKLVEMGFPEDQVRSALKSVDGD 307
VA Q+ Y F TA++WT A+A T + K+Q+L +MG E + R+ L
Sbjct: 130 VAYQFKDKYDLFLLTAKHWTNAYAGGPHTFPDCDSKIQRLRDMGIDEHEARAVLSK---- 185
Query: 306 ENMALEKLCSG 274
EN LEK G
Sbjct: 186 ENWNLEKATEG 196
>sptr|Q8AVM8|Q8AVM8 Similar to huntingtin interacting protein 2.
Length = 200
Score = 154 bits (389), Expect = 2e-36
Identities = 86/191 (45%), Positives = 108/191 (56%), Gaps = 4/191 (2%)
Frame = -1
Query: 837 QKELTECNRDREVSG--VSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPF 664
++E E + E S + + L D N S L G IAGP D+PYEGG F ++I++P YPF
Sbjct: 10 KREFKEVLKSEETSKNQIKVDLVD-ENFSELRGEIAGPPDTPYEGGRFQLEIKIPETYPF 68
Query: 663 EPPKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDA 484
PPK++FITK+WHPNISS GAICLDILKDQW PDDPQDA
Sbjct: 69 NPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDA 128
Query: 483 VVAQQYLRDYPTFAATARYWTEAFAKSASTGME--EKVQKLVEMGFPEDQVRSALKSVDG 310
VVA QY ++ F TAR W +A + T E +K++ L MGF + V +AL S
Sbjct: 129 VVANQYKQNPEMFKQTARLWAHVYAGAPVTSPEYTKKIENLCAMGFDRNAVIAALSSKAW 188
Query: 309 DENMALEKLCS 277
D A E L S
Sbjct: 189 DVETATELLLS 199
>sptr|Q8IDD9|Q8IDD9 Ubiquitin-conjugating enzyme, putative.
Length = 202
Score = 152 bits (384), Expect = 7e-36
Identities = 79/190 (41%), Positives = 108/190 (56%), Gaps = 1/190 (0%)
Frame = -1
Query: 837 QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP 658
QKEL + ++ V + + D NI G I GP+ +PYEGG F++DI +P YP+ P
Sbjct: 15 QKELKDIEKEN-VDEIDAHMKD-TNIFEWVGFIKGPSGTPYEGGHFILDITIPNDYPYNP 72
Query: 657 PKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVV 478
PK++F TK+WHPNISSQ GAICLD+LK++W PDDPQDA V
Sbjct: 73 PKIKFNTKIWHPNISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDAEV 132
Query: 477 AQQYLRDYPTFAATARYWTEAFAKSAS-TGMEEKVQKLVEMGFPEDQVRSALKSVDGDEN 301
A+ Y +Y + TA WT+ FA E+ ++K+ EMGF EDQ + AL + +E
Sbjct: 133 AKMYKENYSLYLKTASVWTKTFATVPKLEPREDIIKKITEMGFSEDQAKKALIKANWNET 192
Query: 300 MALEKLCSGS 271
+AL L S
Sbjct: 193 LALNTLLENS 202
>sptrnew|EAA44469|EAA44469 ENSANGP00000023498.
Length = 198
Score = 152 bits (383), Expect = 9e-36
Identities = 82/190 (43%), Positives = 110/190 (57%), Gaps = 3/190 (1%)
Frame = -1
Query: 837 QKELTECNRDREVSGVSIALHD-GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFE 661
++E E + E++ SI L N + L G IAGP D+PYEGG FV++I+ P YPF
Sbjct: 10 KREFKEVLKSEEITQCSIKLEMVNDNFTELRGEIAGPPDTPYEGGKFVLEIK-PETYPFN 68
Query: 660 PPKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAV 481
PP+++F+TK+WHPNISS GAICLDILKD W PDDPQDAV
Sbjct: 69 PPRVKFVTKIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAV 128
Query: 480 VAQQYLRDYPTFAATARYWTEAFAKS--ASTGMEEKVQKLVEMGFPEDQVRSALKSVDGD 307
VA QY ++ F TA++WT +A A+ ++KVQ+L +MG P R+AL +
Sbjct: 129 VATQYKDNHEMFILTAKHWTNVYAGGPFANADFDQKVQRLRDMGIPAYDARAALSRHNWH 188
Query: 306 ENMALEKLCS 277
A E+L S
Sbjct: 189 LERASEQLFS 198
>sptr|Q9TZ69|Q9TZ69 F40G9.3 protein (EC 6.3.2.19)
(Ubiquitin-conjugating enzyme E2) (Ubiquitin-protein
ligase) (Ubiquitin carrier protein).
Length = 199
Score = 150 bits (378), Expect = 3e-35
Identities = 79/182 (43%), Positives = 102/182 (56%), Gaps = 3/182 (1%)
Frame = -1
Query: 837 QKELTECNRDREVSGVSIALHD-GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFE 661
Q+E E + E+S I + N++ + G I GP D+PY GG F +DI++P YPF
Sbjct: 10 QRECKEVVTNSEISETGIMIEILNENLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFS 69
Query: 660 PPKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAV 481
PP ++F TK+WHPN+SSQ G ICLDILKDQW P DPQDAV
Sbjct: 70 PPNVKFSTKIWHPNVSSQTGVICLDILKDQWAASLTLRTVLLSIQALMCTPEPKDPQDAV 129
Query: 480 VAQQYLRDYPTFAATARYWTEAFAKSA--STGMEEKVQKLVEMGFPEDQVRSALKSVDGD 307
VA+QY+ F ATA YWT FAK A + G + V KL +MG E++ S L + D
Sbjct: 130 VAKQYMEKPAVFKATAEYWTTKFAKGAVKNAGYQALVDKLKDMGVREEEAVSVLSCNNWD 189
Query: 306 EN 301
N
Sbjct: 190 IN 191
>sptrnew|BAC33269|BAC33269 16 days embryo head cDNA, RIKEN
full-length enriched library, clone:C130040A15
product:huntingtin interacting protein 2, full insert
sequence.
Length = 200
Score = 150 bits (378), Expect = 3e-35
Identities = 83/191 (43%), Positives = 107/191 (56%), Gaps = 4/191 (2%)
Frame = -1
Query: 837 QKELTECNRDREVSG--VSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPF 664
++E E + E S + + L D N + L G IAGP D+PYEGG + ++I++P YPF
Sbjct: 10 KREFKEVLKSEETSKNQIKVDLVD-ENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPF 68
Query: 663 EPPKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDA 484
PPK++FITK+WHPNISS GAICLDILKDQW PDDPQDA
Sbjct: 69 NPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDA 128
Query: 483 VVAQQYLRDYPTFAATARYWTEAFAKSASTGME--EKVQKLVEMGFPEDQVRSALKSVDG 310
VVA QY ++ F TAR W +A + + E +K++ L MGF + V AL S
Sbjct: 129 VVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEYTKKIENLCAMGFDRNAVIVALSSKSW 188
Query: 309 DENMALEKLCS 277
D A E L S
Sbjct: 189 DVETATELLLS 199
>sptrnew|BAC29296|BAC29296 16 days neonate cerebellum cDNA, RIKEN
full-length enriched library, clone:9630032E08
product:huntingtin interacting protein 2, full insert
sequence.
Length = 200
Score = 150 bits (378), Expect = 3e-35
Identities = 83/191 (43%), Positives = 107/191 (56%), Gaps = 4/191 (2%)
Frame = -1
Query: 837 QKELTECNRDREVSG--VSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPF 664
++E E + E S + + L D N + L G IAGP D+PYEGG + ++I++P YPF
Sbjct: 10 KREFKEVLKSEETSKNQIKVDLVD-ENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPF 68
Query: 663 EPPKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDA 484
PPK++FITK+WHPNISS GAICLDILKDQW PDDPQDA
Sbjct: 69 NPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDA 128
Query: 483 VVAQQYLRDYPTFAATARYWTEAFAKSASTGME--EKVQKLVEMGFPEDQVRSALKSVDG 310
VVA QY ++ F TAR W +A + + E +K++ L MGF + V AL S
Sbjct: 129 VVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEYTKKIENLCAMGFDRNAVIVALSSKSW 188
Query: 309 DENMALEKLCS 277
D A E L S
Sbjct: 189 DVETATELLLS 199
>sw|P27924|UBC1_HUMAN Ubiquitin-conjugating enzyme E2-25 kDa (EC
6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier
protein) (Huntingtin interacting protein 2) (HIP-2).
Length = 200
Score = 150 bits (378), Expect = 3e-35
Identities = 83/191 (43%), Positives = 107/191 (56%), Gaps = 4/191 (2%)
Frame = -1
Query: 837 QKELTECNRDREVSG--VSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPF 664
++E E + E S + + L D N + L G IAGP D+PYEGG + ++I++P YPF
Sbjct: 10 KREFKEVLKSEETSKNQIKVDLVD-ENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPF 68
Query: 663 EPPKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDA 484
PPK++FITK+WHPNISS GAICLDILKDQW PDDPQDA
Sbjct: 69 NPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDA 128
Query: 483 VVAQQYLRDYPTFAATARYWTEAFAKSASTGME--EKVQKLVEMGFPEDQVRSALKSVDG 310
VVA QY ++ F TAR W +A + + E +K++ L MGF + V AL S
Sbjct: 129 VVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEYTKKIENLCAMGFDRNAVIVALSSKSW 188
Query: 309 DENMALEKLCS 277
D A E L S
Sbjct: 189 DVETATELLLS 199
>sptrnew|EAA20958|EAA20958 Ubiquitin conjugating enzyme.
Length = 202
Score = 148 bits (373), Expect = 1e-34
Identities = 79/194 (40%), Positives = 109/194 (56%), Gaps = 5/194 (2%)
Frame = -1
Query: 837 QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP 658
QKEL + + V + + D +N G I GP +PYEGG F + I +P YP+ P
Sbjct: 15 QKELKDIENEN-VQEIDAHIKD-SNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNP 72
Query: 657 PKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVV 478
PK++F+TK+WHPNISSQ GAICLD+LK++W PDDPQDA V
Sbjct: 73 PKIKFVTKIWHPNISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDAEV 132
Query: 477 AQQYLRDYPTFAATARYWTEAFAKSASTGMEEK-----VQKLVEMGFPEDQVRSALKSVD 313
A+ Y ++ F TA WT+ FA TG +E+ ++K+ EMGF EDQ ++AL +
Sbjct: 133 AKMYKENHALFVKTASVWTKTFA----TGPKEEPREVIIKKITEMGFSEDQAKNALIKAN 188
Query: 312 GDENMALEKLCSGS 271
+E +AL L S
Sbjct: 189 WNETLALNTLLENS 202
>sw|P21734|UBC1_YEAST Ubiquitin-conjugating enzyme E2-24 kDa (EC
6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier
protein).
Length = 215
Score = 140 bits (353), Expect = 3e-32
Identities = 76/195 (38%), Positives = 104/195 (53%), Gaps = 18/195 (9%)
Frame = -1
Query: 813 RDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITK 634
+D + +++ ++I HL GT GP +PYEGG FV+DI +P YPF+PPKMQF TK
Sbjct: 15 KDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTK 74
Query: 633 VWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVVAQQYLRDY 454
V+HPNISS GAICLDILK+ W P+DPQDA VAQ YLRD
Sbjct: 75 VYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDR 134
Query: 453 PTFAATARYWTEAFAKSASTGMEEKVQ-------------KLVEMGFPEDQV-----RSA 328
+F TA WT +A S G + V+ + GF +D++ R
Sbjct: 135 ESFNKTAALWTRLYASETSNGQKGNVEESDLYGIDHDLIDEFESQGFEKDKIVEVLRRLG 194
Query: 327 LKSVDGDENMALEKL 283
+KS+D ++N ++
Sbjct: 195 VKSLDPNDNNTANRI 209
>sptr|O74810|O74810 Ubiquitin-conjugating enzyme E2 (EC 6.3.2.19)
(Ubiquitin-protein ligase) (Ubiquitin carrier protein).
Length = 217
Score = 136 bits (343), Expect = 4e-31
Identities = 70/150 (46%), Positives = 91/150 (60%)
Frame = -1
Query: 834 KELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPP 655
KEL + +D++ ++D +ISHL G GP +PYEGG FV+DI +P YPF PP
Sbjct: 11 KELADVQQDKQAGIQVWTIND--DISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPP 68
Query: 654 KMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVVA 475
KM F TK++HPN+SSQ GAICLDILKDQW P +PQDA VA
Sbjct: 69 KMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVA 128
Query: 474 QQYLRDYPTFAATARYWTEAFAKSASTGME 385
Q YL++Y F TAR WT ++A +A G++
Sbjct: 129 QVYLQNYQQFVRTAREWTSSYA-AAPAGVD 157
>sptr|Q42045|Q42045 Ubiquitin-conjugating enzyme E2 (EC 6.3.2.19)
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
(Fragment).
Length = 115
Score = 136 bits (342), Expect = 5e-31
Identities = 70/116 (60%), Positives = 84/116 (72%)
Frame = -1
Query: 624 PNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVVAQQYLRDYPTF 445
PNISSQ+GAICLDILKDQW P DPQDAVVA+QY+++Y F
Sbjct: 1 PNISSQSGAICLDILKDQWSXALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKNYQVF 60
Query: 444 AATARYWTEAFAKSASTGMEEKVQKLVEMGFPEDQVRSALKSVDGDENMALEKLCS 277
+TARYWTE FAK +S +EEKV++LVEMGF + QVRSA++S GDEN+ALEKLCS
Sbjct: 61 VSTARYWTETFAKKSS--LEEKVKRLVEMGFGDAQVRSAIESSGGDENLALEKLCS 114
>sptrnew|EAA32355|EAA32355 Hypothetical protein ( probable
ubiquitin--protein ligase.
Length = 235
Score = 135 bits (340), Expect = 8e-31
Identities = 78/202 (38%), Positives = 101/202 (50%), Gaps = 24/202 (11%)
Frame = -1
Query: 834 KELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPP 655
KEL + DRE SGV D +N+SHL G+ +GP DSPY GGT+ +DI++P YPF+PP
Sbjct: 11 KELQDIWNDRETSGVMAEPLDSSNLSHLKGSFSGPPDSPYAGGTYEVDIQIPDKYPFKPP 70
Query: 654 KMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVVA 475
M ITK+WHPN+SS GAICLDIL W P DPQDA VA
Sbjct: 71 SMYLITKIWHPNVSSVTGAICLDILGTAWSPVGTIKTALLAVRMLLESPNPKDPQDAQVA 130
Query: 474 QQYLRDYPTFAATARYWTEAFA-------------KSASTGM-----------EEKVQKL 367
+ + + FA TA W +A ++A G ++ V +
Sbjct: 131 KMLMENPKLFARTAHDWAVKYAGAPRVDKIPLKYDETAKEGSRNDASRYAGYNKDLVDRF 190
Query: 366 VEMGFPEDQVRSALKSVDGDEN 301
V MGF ++V A K V D N
Sbjct: 191 VNMGFDVEKVVDAFKFVGIDRN 212
>sptr|Q9P725|Q9P725 Probable ubiquitin--protein ligase (EC 6.3.2.19)
(Ubiquitin- conjugating enzyme E2) (Ubiquitin-protein
ligase) (Ubiquitin carrier protein).
Length = 235
Score = 135 bits (340), Expect = 8e-31
Identities = 78/202 (38%), Positives = 101/202 (50%), Gaps = 24/202 (11%)
Frame = -1
Query: 834 KELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPP 655
KEL + DRE SGV D +N+SHL G+ +GP DSPY GGT+ +DI++P YPF+PP
Sbjct: 11 KELQDIWNDRETSGVMAEPLDSSNLSHLKGSFSGPPDSPYAGGTYEVDIQIPDKYPFKPP 70
Query: 654 KMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVVA 475
M ITK+WHPN+SS GAICLDIL W P DPQDA VA
Sbjct: 71 SMYLITKIWHPNVSSVTGAICLDILGTAWSPVGTIKTALLAVRMLLESPNPKDPQDAQVA 130
Query: 474 QQYLRDYPTFAATARYWTEAFA-------------KSASTGM-----------EEKVQKL 367
+ + + FA TA W +A ++A G ++ V +
Sbjct: 131 KMLMENPKLFARTAHDWAVKYAGAPRVDKIPLKYDETAKEGSRNDASRYAGYNKDLVDRF 190
Query: 366 VEMGFPEDQVRSALKSVDGDEN 301
V MGF ++V A K V D N
Sbjct: 191 VNMGFDVEKVVDAFKFVGIDRN 212
>sw|P52484|UBC8_CAEEL Probable ubiquitin-conjugating enzyme E2-29
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein).
Length = 260
Score = 134 bits (338), Expect = 1e-30
Identities = 70/169 (41%), Positives = 92/169 (54%), Gaps = 18/169 (10%)
Frame = -1
Query: 798 SGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKM---------- 649
+G+ + + + N+ + G I GP +PY GGTF I + +P YPFEPPK+
Sbjct: 39 AGIHVEIKEN-NLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAF 97
Query: 648 -----QFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDA 484
+F+T++WHPNISSQ G ICLDILKD+W P DPQDA
Sbjct: 98 EYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLCSPEPSDPQDA 157
Query: 483 VVAQQYLRDYPTFAATARYWTEAFA---KSASTGMEEKVQKLVEMGFPE 346
VVA+Q++ +YP F ATA YWT FA K KV +L+EMG E
Sbjct: 158 VVAKQFINNYPMFTATAVYWTSYFANSKKDVEPDFNRKVGRLIEMGIRE 206
>sw|P15731|UBC4_YEAST Ubiquitin-conjugating enzyme E2 4 (EC
6.3.2.19) (Ubiquitin-protein ligase 4) (Ubiquitin
carrier protein 4).
Length = 148
Score = 114 bits (285), Expect = 2e-24
Identities = 61/142 (42%), Positives = 79/142 (55%)
Frame = -1
Query: 834 KELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPP 655
KEL++ RD S + + D ++ H +I GPADSPY GG F + I P YPF+PP
Sbjct: 9 KELSDLERDPPTSCSAGPVGD--DLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPP 66
Query: 654 KMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVVA 475
K+ F TK++HPNI++ NG ICLDILKDQW PDDP +A
Sbjct: 67 KISFTTKIYHPNINA-NGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIA 125
Query: 474 QQYLRDYPTFAATARYWTEAFA 409
Y D P + ATAR WT+ +A
Sbjct: 126 HIYKTDRPKYEATAREWTKKYA 147
>sptr|O48555|O48555 Ubiquitin conjugating enzyme (EC 6.3.2.19)
(Ubiquitin-conjugating enzyme E2) (Ubiquitin-protein
ligase) (Ubiquitin carrier protein).
Length = 148
Score = 113 bits (283), Expect = 3e-24
Identities = 61/142 (42%), Positives = 79/142 (55%)
Frame = -1
Query: 834 KELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPP 655
KEL + +D S A G ++ H TI GP DSPY GG F+++I P YPF+PP
Sbjct: 8 KELKDLQKDPPTS--CSAGPAGEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP 65
Query: 654 KMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVVA 475
K+ F TKV+HPNI+S NG+ICLDILK+QW PDDP +A
Sbjct: 66 KVSFKTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA 124
Query: 474 QQYLRDYPTFAATARYWTEAFA 409
Y D P + +TAR WT+ +A
Sbjct: 125 HMYKTDRPKYESTARSWTQKYA 146
>sptr|Q8L458|Q8L458 Ubiquitin conjugating enzyme (EC 6.3.2.19)
(Ubiquitin-conjugating enzyme E2) (Ubiquitin-protein
ligase) (Ubiquitin carrier protein).
Length = 148
Score = 113 bits (282), Expect = 4e-24
Identities = 61/142 (42%), Positives = 78/142 (54%)
Frame = -1
Query: 834 KELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPP 655
KEL + +D S A G ++ H TI GP DSPY GG F+++I P YPF+PP
Sbjct: 8 KELKDLQKDPPTS--CSAGPAGEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP 65
Query: 654 KMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVVA 475
K+ F TKV+HPNI+S NG+ICLDILK+QW PDDP +A
Sbjct: 66 KVSFKTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA 124
Query: 474 QQYLRDYPTFAATARYWTEAFA 409
Y D P + TAR WT+ +A
Sbjct: 125 HMYKTDRPKYETTARSWTQKYA 146
>sptr|Q8S920|Q8S920 Ubiquitin-conjugating enzyme OsUBC5a (EC
6.3.2.19) (Ubiquitin- conjugating enzyme E2)
(Ubiquitin-protein ligase) (Ubiquitin carrier protein).
Length = 147
Score = 111 bits (278), Expect = 1e-23
Identities = 61/143 (42%), Positives = 79/143 (55%)
Frame = -1
Query: 837 QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP 658
QKEL + +D S + + G ++ H TI GP+DSPY GG F++ I P YPF+P
Sbjct: 7 QKELKDLQKDPPTSCSAGPV--GEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKP 64
Query: 657 PKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVV 478
PK+ F TKV+HPNI+S NG+ICLDILKDQW PDDP +
Sbjct: 65 PKVAFRTKVFHPNINS-NGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
Query: 477 AQQYLRDYPTFAATARYWTEAFA 409
A Y D + TAR WT+ +A
Sbjct: 124 AHMYKTDRHKYENTARTWTQRYA 146
>sptrnew|EAA09707|EAA09707 ENSANGP00000013066 (Fragment).
Length = 114
Score = 111 bits (278), Expect = 1e-23
Identities = 53/113 (46%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Frame = -1
Query: 687 RLPGGYPFEPPKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXX 508
R+P YPF PP+++F+TK+WHPNISS GAICLDILKD W
Sbjct: 1 RVPETYPFNPPRVKFVTKIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAA 60
Query: 507 XPDDPQDAVVAQQYLRDYPTFAATARYWTEAFAKS--ASTGMEEKVQKLVEMG 355
PDDPQDAVVA QY ++ F TA++WT +A A+ ++KVQ+L +MG
Sbjct: 61 EPDDPQDAVVATQYKDNHEMFILTAKHWTNVYAGGPFANADFDQKVQRLRDMG 113
>sptr|Q9SH72|Q9SH72 F22C12.2 (EC 6.3.2.19) (Ubiquitin-conjugating
enzyme E2) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein).
Length = 146
Score = 110 bits (276), Expect = 2e-23
Identities = 58/142 (40%), Positives = 79/142 (55%)
Frame = -1
Query: 834 KELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPP 655
KEL + +D S ++A ++ H TI GP+DSPY GG F++ I P YPF+PP
Sbjct: 8 KELKDLQKDPPTSCSAVA----EDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPP 63
Query: 654 KMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVVA 475
K+ F TKV+HPN++S NG+ICLDILK+QW PDDP +A
Sbjct: 64 KVAFRTKVFHPNVNS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA 122
Query: 474 QQYLRDYPTFAATARYWTEAFA 409
Y D + +TAR WT+ +A
Sbjct: 123 HMYKTDRAKYESTARSWTQKYA 144
>sptr|Q94DA8|Q94DA8 P0694A04.26 protein (EC 6.3.2.19) (P0684E06.1
protein) (Ubiquitin- conjugating enzyme E2)
(Ubiquitin-protein ligase) (Ubiquitin carrier protein).
Length = 374
Score = 110 bits (276), Expect = 2e-23
Identities = 60/141 (42%), Positives = 77/141 (54%)
Frame = -1
Query: 837 QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP 658
QKEL + +D S + G ++ H TI GP+DSPY GG F++ I P YPF+P
Sbjct: 160 QKELKDLQKDPPTSCSPV----GEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKP 215
Query: 657 PKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVV 478
PK+ F TKV+HPNI+S NG+ICLDILKDQW PDDP +
Sbjct: 216 PKVAFRTKVFHPNINS-NGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 274
Query: 477 AQQYLRDYPTFAATARYWTEA 415
A Y D + TAR WT++
Sbjct: 275 AHMYKTDRHKYENTARTWTQS 295
>sptr|Q43821|Q43821 Ubiquitin conjugating enzyme (EC 6.3.2.19)
(Ubiquitin-conjugating enzyme E2) (Ubiquitin-protein
ligase) (Ubiquitin carrier protein).
Length = 148
Score = 110 bits (275), Expect = 3e-23
Identities = 60/142 (42%), Positives = 79/142 (55%)
Frame = -1
Query: 834 KELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPP 655
KEL + +D S + + + ++ H TI GPADSPY GG F++ I P YPF+PP
Sbjct: 8 KELKDLQKDPPTSCSAGPVAE--DMFHWQATIVGPADSPYAGGVFLVTIHFPPDYPFKPP 65
Query: 654 KMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVVA 475
K+ F TKV+HPNI+S NG+ICLDILK+QW PDDP +A
Sbjct: 66 KVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA 124
Query: 474 QQYLRDYPTFAATARYWTEAFA 409
Y D + ATAR WT+ +A
Sbjct: 125 HMYKTDRTKYEATARSWTQKYA 146
>sptr|Q9SLE4|Q9SLE4 Putative ubiquitin-conjugating enzyme E2 (EC
6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin carrier
protein) (E2, ubiquitin-conjugating enzyme, putative).
Length = 148
Score = 110 bits (275), Expect = 3e-23
Identities = 63/142 (44%), Positives = 77/142 (54%)
Frame = -1
Query: 834 KELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPP 655
KEL E RD VS A G ++ H TI GP +SPY GG F+++I P YPF+PP
Sbjct: 8 KELKELQRDPPVS--CSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPP 65
Query: 654 KMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVVA 475
K+ F TKV+HPNI+S NG ICLDILKDQW PDDP +A
Sbjct: 66 KVVFRTKVFHPNINS-NGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA 124
Query: 474 QQYLRDYPTFAATARYWTEAFA 409
Y D + A AR WT+ +A
Sbjct: 125 HIYKTDKTKYEAMARSWTQKYA 146
>sptr|Q42897|Q42897 Ubiquitin-conjugating enzyme E2 (EC 6.3.2.19)
(Ubiquitin-protein ligase) (Ubiquitin carrier protein).
Length = 148
Score = 110 bits (274), Expect = 4e-23
Identities = 60/142 (42%), Positives = 78/142 (54%)
Frame = -1
Query: 834 KELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPP 655
KEL + +D S + + + ++ H TI GPADSPY GG F++ I P YPF+PP
Sbjct: 8 KELKDLQKDPPTSCSAGPVAE--DMFHWQATIMGPADSPYSGGVFLVTIHFPPDYPFKPP 65
Query: 654 KMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVVA 475
K+ F TKV+HPNI+S NG+ICLDILK+QW PDDP +A
Sbjct: 66 KVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA 124
Query: 474 QQYLRDYPTFAATARYWTEAFA 409
Y D + TAR WT+ FA
Sbjct: 125 HMYKTDRSKYETTARSWTQKFA 146
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 631,362,438
Number of Sequences: 1272877
Number of extensions: 13047304
Number of successful extensions: 37787
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37285
length of database: 406,886,216
effective HSP length: 122
effective length of database: 251,595,222
effective search space used: 48306282624
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)