BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2193041.2.1
(877 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptrnew|BAC83538|BAC83538 Putative cytoplasmic ribosomal protein... 348 5e-95
sptr|Q94GV7|Q94GV7 Cytoplasmic ribosomal protein L18. 343 2e-93
sptr|Q940B0|Q940B0 Putative 60S ribosomal protein. 318 5e-86
sw|P42791|RL18_ARATH 60S ribosomal protein L18. 316 3e-85
sw|O65729|RL18_CICAR 60S ribosomal protein L18 (Fragment). 298 5e-80
sptr|Q84U89|Q84U89 60S ribosomal protein (Fragment). 263 2e-69
sptr|Q801H3|Q801H3 Ribosomal protein L18 (Fragment). 258 1e-67
sptr|Q86LX2|Q86LX2 Ribosomal protein L18 (Fragment). 250 2e-65
sptrnew|AAH53773|AAH53773 Hypothetical protein. 249 5e-65
sw|P35980|RL18_MOUSE 60S ribosomal protein L18. 248 6e-65
sw|P12001|RL18_RAT 60S ribosomal protein L18. 248 8e-65
sw|Q07020|RL18_HUMAN 60S ribosomal protein L18. 248 1e-64
sptrnew|AAH53777|AAH53777 Hypothetical protein. 247 1e-64
sw|Q90YV0|RL18_ICTPU 60S ribosomal protein L18. 246 2e-64
sw|P02412|RL18_XENLA 60S ribosomal protein L18 (L14B). 244 1e-63
sw|Q9I836|RL18_OREMO 60S ribosomal protein L18. 242 4e-63
sptr|Q9VS34|Q9VS34 CG8615 protein (Ribosomal protein L18) (RH018... 241 1e-62
sw|P09897|RLNA_XENLA 60S ribosomal protein L14A. 237 2e-61
sptrnew|EAA27337|EAA27337 Hypothetical protein. 233 3e-60
sptrnew|EAA20707|EAA20707 Eukaryotic ribosomal protein L18, puta... 227 1e-58
sptr|Q98SG3|Q98SG3 Ribosomal protein L18 (Fragment). 226 4e-58
sptrnew|EAA04761|EAA04761 AgCP3167 (Fragment). 226 4e-58
sw|P07279|RL18_YEAST 60S ribosomal protein L18 (RP28). 222 5e-57
sptr|Q962Y8|Q962Y8 Ribosomal protein L18. 222 6e-57
sptr|O45946|O45946 Y45F10D.12 protein. 222 6e-57
sptr|Q8TFH1|Q8TFH1 60S ribosomal protein L18. 221 8e-57
sw|Q10192|RL18_SCHPO 60S ribosomal protein L18. 221 1e-56
sptr|Q8IDS5|Q8IDS5 60S ribosomal subunit porotein L18, putative. 218 9e-56
sptr|Q801I8|Q801I8 Ribosomal protein L18 (Fragment). 216 4e-55
sptr|O22254|O22254 60S ribosomal protein L18, 5'partial (Fragment). 202 4e-51
>sptrnew|BAC83538|BAC83538 Putative cytoplasmic ribosomal protein
L18.
Length = 195
Score = 348 bits (893), Expect = 5e-95
Identities = 178/195 (91%), Positives = 185/195 (94%), Gaps = 8/195 (4%)
Frame = +3
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
MGIDLVAGGRNKKTKRTAP+S+DVYLKL+VKLYRFLVRRTKS+FNAVILKRLFMSKTNRP
Sbjct: 1 MGIDLVAGGRNKKTKRTAPRSEDVYLKLIVKLYRFLVRRTKSHFNAVILKRLFMSKTNRP 60
Query: 252 PLSMRRLVRFMEGK--------GDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARI 407
PLSMRRLVRFMEGK GDQIAVIVGTVTDDKRI EVPAMKV ALRFTETARARI
Sbjct: 61 PLSMRRLVRFMEGKVPDRHAISGDQIAVIVGTVTDDKRIYEVPAMKVAALRFTETARARI 120
Query: 408 INAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRK 587
INAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAV+HFGPAPGVPHS+TKPYVRSKGRK
Sbjct: 121 INAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSNTKPYVRSKGRK 180
Query: 588 FEKARGRRNSRGFKV 632
FEKARGRRNS+GFKV
Sbjct: 181 FEKARGRRNSKGFKV 195
>sptr|Q94GV7|Q94GV7 Cytoplasmic ribosomal protein L18.
Length = 188
Score = 343 bits (880), Expect = 2e-93
Identities = 173/188 (92%), Positives = 180/188 (95%), Gaps = 1/188 (0%)
Frame = +3
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
MGIDLVAGGRNKKTKRTAP+SDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP
Sbjct: 1 MGIDLVAGGRNKKTKRTAPRSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 60
Query: 252 PLSMRRLVRFMEGKGDQ-IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGEC 428
PLS+RRL +FMEGK + IAVIVGTVTDDKRI E+P MKV ALRFTETARARI+NAGGEC
Sbjct: 61 PLSLRRLAKFMEGKEENNIAVIVGTVTDDKRIQEIPKMKVTALRFTETARARIVNAGGEC 120
Query: 429 LTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGR 608
LTFDQLALRAPLG+NTVLLRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGR
Sbjct: 121 LTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGR 180
Query: 609 RNSRGFKV 632
RNSRGFKV
Sbjct: 181 RNSRGFKV 188
>sptr|Q940B0|Q940B0 Putative 60S ribosomal protein.
Length = 187
Score = 318 bits (816), Expect = 5e-86
Identities = 157/187 (83%), Positives = 172/187 (91%)
Frame = +3
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
MGIDL+AGG++KKTKRTAPKSDDVYLKLLVKLYRFLVRR+ SNFNAVILKRLFMSK N+
Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60
Query: 252 PLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECL 431
PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGECL
Sbjct: 61 PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120
Query: 432 TFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRR 611
TFDQLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHS+TKPYVR KGRKFEKARG+R
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 180
Query: 612 NSRGFKV 632
SRGFKV
Sbjct: 181 KSRGFKV 187
>sw|P42791|RL18_ARATH 60S ribosomal protein L18.
Length = 187
Score = 316 bits (809), Expect = 3e-85
Identities = 155/187 (82%), Positives = 170/187 (90%)
Frame = +3
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
MGIDL+AGG++KKTKRTAPKSDDVYLKL VKLYRFLVRRT S FN VILKRLFMSK N+
Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60
Query: 252 PLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECL 431
PLS+ RLV FM GK D+IAV+VGT+TDD R+ E+PAMKV ALRFTE ARARI AGGECL
Sbjct: 61 PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120
Query: 432 TFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRR 611
TFDQLALRAPLGQNTVLLRGPKN+REAV+HFGPAPGVPHSH+KPYVR+KGRKFEKARG+R
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180
Query: 612 NSRGFKV 632
SRGFKV
Sbjct: 181 KSRGFKV 187
>sw|O65729|RL18_CICAR 60S ribosomal protein L18 (Fragment).
Length = 183
Score = 298 bits (764), Expect = 5e-80
Identities = 148/184 (80%), Positives = 166/184 (90%)
Frame = +3
Query: 81 DLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPLS 260
DL AGG+NKKTKRT+PKS+D+YLKLLVKLYRFLVRRT SNFNAVILKRLFMSK NRPPLS
Sbjct: 1 DLKAGGKNKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLS 60
Query: 261 MRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFD 440
+ RL+++M+GK +I V+VG VTDD R+ +VP +KV AL+FTETARARI AGGECLTFD
Sbjct: 61 LSRLIKYMQGKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFD 120
Query: 441 QLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSR 620
QLALR PL +TVLLRGPKNAREAV+HFGPAPGVPHSHTKPYVRSKGRKFEKARGRR SR
Sbjct: 121 QLALRLPL-TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSR 179
Query: 621 GFKV 632
GF+V
Sbjct: 180 GFRV 183
>sptr|Q84U89|Q84U89 60S ribosomal protein (Fragment).
Length = 164
Score = 263 bits (672), Expect = 2e-69
Identities = 131/163 (80%), Positives = 147/163 (90%)
Frame = +3
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
MGIDL AGG++KKTKRTAPKS+D+YLKLLVKLYRFLVRRT+SNFN VILKRLFMSK N+P
Sbjct: 1 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTESNFNKVILKRLFMSKVNKP 60
Query: 252 PLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECL 431
PLS+ RL+R+ +GK +IAV+VG VTDD R+ EVPA+KV ALRFTE ARARI AGGECL
Sbjct: 61 PLSLSRLIRYTKGKEGKIAVVVGAVTDDIRVYEVPAIKVTALRFTEKARARIEKAGGECL 120
Query: 432 TFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTK 560
TFDQLAL+APLGQNTVLLRGPKNAREAV+HFG APGVPHS TK
Sbjct: 121 TFDQLALKAPLGQNTVLLRGPKNAREAVKHFGRAPGVPHSSTK 163
>sptr|Q801H3|Q801H3 Ribosomal protein L18 (Fragment).
Length = 188
Score = 258 bits (658), Expect = 1e-67
Identities = 127/188 (67%), Positives = 154/188 (81%), Gaps = 2/188 (1%)
Frame = +3
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
MGID + +++K +RT P+S+D+YL+LLVKLYRFL RRT S FN V+LKRLFMS+TNRP
Sbjct: 1 MGID-IRHNKDRKVRRTEPRSEDIYLRLLVKLYRFLARRTSSPFNKVVLKRLFMSRTNRP 59
Query: 252 PLSMRRLVRFME--GKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGE 425
P+S+ RLVR M+ G+ ++AV++GT+TDD RI +P +KVCALR T AR RI+ AGGE
Sbjct: 60 PISIARLVRKMKMGGREGKVAVVIGTITDDPRIFTIPKIKVCALRVTAKARDRILRAGGE 119
Query: 426 CLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARG 605
LT DQLAL +P GQNTVLL GP+ REA RHFGPAPGVPHSHTKPYVRSKGRKFE+ARG
Sbjct: 120 VLTLDQLALLSPRGQNTVLLSGPRKGREAYRHFGPAPGVPHSHTKPYVRSKGRKFERARG 179
Query: 606 RRNSRGFK 629
RR SRG+K
Sbjct: 180 RRASRGYK 187
>sptr|Q86LX2|Q86LX2 Ribosomal protein L18 (Fragment).
Length = 188
Score = 250 bits (639), Expect = 2e-65
Identities = 120/188 (63%), Positives = 155/188 (82%), Gaps = 2/188 (1%)
Frame = +3
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
MGID + R+++ +R PKS+D+YL+LLVKLYRFL RRT + FN V+L+RLFMS+TNRP
Sbjct: 1 MGID-IDHRRDRRVRRKEPKSEDIYLRLLVKLYRFLARRTNAKFNQVVLERLFMSRTNRP 59
Query: 252 PLSMRRLVRFME--GKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGE 425
P+S+ RL+R M+ G+ + AV+VGT+TDD RI E+P +K+C LR TE ARA+I+ AGGE
Sbjct: 60 PMSIARLIRLMKKPGREGKTAVVVGTITDDVRIFEIPKLKICCLRVTEGARAKILKAGGE 119
Query: 426 CLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARG 605
+TFDQLALR+P G+NTVL++G + ARE RH+GPAPGVPHSHTKP+VRSKGRKFE+ARG
Sbjct: 120 IITFDQLALRSPKGKNTVLIQGQRRARETCRHWGPAPGVPHSHTKPFVRSKGRKFERARG 179
Query: 606 RRNSRGFK 629
RR S G+K
Sbjct: 180 RRKSCGYK 187
>sptrnew|AAH53773|AAH53773 Hypothetical protein.
Length = 188
Score = 249 bits (635), Expect = 5e-65
Identities = 122/188 (64%), Positives = 151/188 (80%), Gaps = 2/188 (1%)
Frame = +3
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
MGID + +++K +R PKS D+YL+LLVKLYRFL RRT S+FN V+LKRLFMS+TNRP
Sbjct: 1 MGID-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNRVVLKRLFMSRTNRP 59
Query: 252 PLSMRRLVRFM--EGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGE 425
PLSM RL+R M +G+ ++ AV+VG +TDD RI ++P +KVCAL+ T AR+RI+ +GG+
Sbjct: 60 PLSMSRLIRKMKLQGRENKTAVVVGCITDDVRIHDIPKLKVCALKITSGARSRILKSGGQ 119
Query: 426 CLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARG 605
+TFDQLAL AP GQNTVLL GP+ ARE RHFG APG PHS TKPYV SKGRKFE+ARG
Sbjct: 120 IMTFDQLALAAPKGQNTVLLSGPRKAREVYRHFGKAPGTPHSRTKPYVLSKGRKFERARG 179
Query: 606 RRNSRGFK 629
RR SRG+K
Sbjct: 180 RRASRGYK 187
>sw|P35980|RL18_MOUSE 60S ribosomal protein L18.
Length = 187
Score = 248 bits (634), Expect = 6e-65
Identities = 122/187 (65%), Positives = 150/187 (80%), Gaps = 2/187 (1%)
Frame = +3
Query: 75 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPP 254
G+D + +++K +R PKS D+YL+LLVKLYRFL RRT S FN V+LKRLFMS+TNRPP
Sbjct: 1 GVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 59
Query: 255 LSMRRLVRFME--GKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGEC 428
LS+ R++R M+ G+ ++ AV+VGTVTDD RI EVP +KVCALR + AR+RI+ AGG+
Sbjct: 60 LSLSRMIRKMKLPGRENKTAVVVGTVTDDVRILEVPKLKVCALRVSSRARSRILKAGGKI 119
Query: 429 LTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGR 608
LTFDQLAL +P G+ TVLL GP+ RE RHFG APG PHSHTKPYVRSKGRKFE+ARGR
Sbjct: 120 LTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGR 179
Query: 609 RNSRGFK 629
R SRG+K
Sbjct: 180 RASRGYK 186
>sw|P12001|RL18_RAT 60S ribosomal protein L18.
Length = 187
Score = 248 bits (633), Expect = 8e-65
Identities = 121/187 (64%), Positives = 150/187 (80%), Gaps = 2/187 (1%)
Frame = +3
Query: 75 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPP 254
G+D + +++K +R PKS D+YL+LLVKLYRFL RRT S FN V+LKRLFMS+TNRPP
Sbjct: 1 GVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 59
Query: 255 LSMRRLVRFME--GKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGEC 428
LS+ R++R M+ G+ ++ AV+VGT+TDD RI EVP +KVCALR + AR+RI+ AGG+
Sbjct: 60 LSLSRMIRKMKLPGRENKTAVVVGTITDDVRILEVPKLKVCALRVSSRARSRILKAGGKI 119
Query: 429 LTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGR 608
LTFDQLAL +P G+ TVLL GP+ RE RHFG APG PHSHTKPYVRSKGRKFE+ARGR
Sbjct: 120 LTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGR 179
Query: 609 RNSRGFK 629
R SRG+K
Sbjct: 180 RASRGYK 186
>sw|Q07020|RL18_HUMAN 60S ribosomal protein L18.
Length = 187
Score = 248 bits (632), Expect = 1e-64
Identities = 121/187 (64%), Positives = 149/187 (79%), Gaps = 2/187 (1%)
Frame = +3
Query: 75 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPP 254
G+D + +++K +R PKS D+YL+LLVKLYRFL RRT S FN V+LKRLFMS+TNRPP
Sbjct: 1 GVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 59
Query: 255 LSMRRLVRFME--GKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGEC 428
LS+ R++R M+ G+ ++ AV+VGT+TDD R+ EVP +KVCALR T AR+RI+ AGG+
Sbjct: 60 LSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKI 119
Query: 429 LTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGR 608
LTFDQLAL +P G TVLL GP+ RE RHFG APG PHSHTKPYVRSKGRKFE+ARGR
Sbjct: 120 LTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGR 179
Query: 609 RNSRGFK 629
R SRG+K
Sbjct: 180 RASRGYK 186
>sptrnew|AAH53777|AAH53777 Hypothetical protein.
Length = 188
Score = 247 bits (631), Expect = 1e-64
Identities = 122/188 (64%), Positives = 150/188 (79%), Gaps = 2/188 (1%)
Frame = +3
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
MGID + +++K +R PKS D+YL+LLVKLYRFL RRT S+FN V+LKRLFMS+TNRP
Sbjct: 1 MGID-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNRVVLKRLFMSRTNRP 59
Query: 252 PLSMRRLVRFME--GKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGE 425
PLSM RL+R M+ G+ ++ AV+VG +TDD RI ++P + VCAL+ T AR+RI+ AGG+
Sbjct: 60 PLSMSRLIRKMKLPGRENKTAVVVGCITDDVRIHDIPKLTVCALKLTSGARSRILKAGGQ 119
Query: 426 CLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARG 605
+TFDQLAL AP GQNTVLL GP+ ARE RHFG APG PHS TKPYV SKGRKFE+ARG
Sbjct: 120 IMTFDQLALAAPKGQNTVLLSGPRKAREVYRHFGKAPGTPHSRTKPYVLSKGRKFERARG 179
Query: 606 RRNSRGFK 629
RR SRG+K
Sbjct: 180 RRASRGYK 187
>sw|Q90YV0|RL18_ICTPU 60S ribosomal protein L18.
Length = 187
Score = 246 bits (629), Expect = 2e-64
Identities = 120/187 (64%), Positives = 149/187 (79%), Gaps = 2/187 (1%)
Frame = +3
Query: 75 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPP 254
G+D + +++K RT PKS D+YL+LLVKLYRFL RR+ + FN V+LKRLFMSKTNRPP
Sbjct: 1 GVD-IRHNKDRKVHRTEPKSQDIYLRLLVKLYRFLARRSDAPFNKVVLKRLFMSKTNRPP 59
Query: 255 LSMRRLVRFM--EGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGEC 428
L++ RL+R M +G+ ++IAV+VGT+TDD RI +P +KVCALR T AR RI+ AGG+
Sbjct: 60 LALSRLIRKMKLQGRENKIAVVVGTITDDVRILNIPKLKVCALRVTAGARRRILKAGGQV 119
Query: 429 LTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGR 608
+TFDQLA+ P GQ TVLL GP+ ARE RHFG APG PHSHTKPY+RSKGRKFE+ARGR
Sbjct: 120 MTFDQLAVTTPKGQGTVLLSGPRKAREVYRHFGKAPGTPHSHTKPYIRSKGRKFERARGR 179
Query: 609 RNSRGFK 629
R SRG+K
Sbjct: 180 RASRGYK 186
>sw|P02412|RL18_XENLA 60S ribosomal protein L18 (L14B).
Length = 187
Score = 244 bits (623), Expect = 1e-63
Identities = 120/187 (64%), Positives = 149/187 (79%), Gaps = 2/187 (1%)
Frame = +3
Query: 75 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPP 254
GID + +++K +R PKS D+YL+LLVKLYRFL RRT S+FN V+LKRLFMS+TNRPP
Sbjct: 1 GID-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNRVVLKRLFMSRTNRPP 59
Query: 255 LSMRRLVRFM--EGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGEC 428
LSM RL+R M +G+ ++ AV+VG +TDD RI ++P +KVCAL+ T R+RI+ +GG+
Sbjct: 60 LSMSRLIRKMKLQGRENKTAVVVGYITDDVRIHDIPKLKVCALKITSGDRSRILKSGGQI 119
Query: 429 LTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGR 608
+TFDQLAL AP GQNTVLL GP+ ARE RHFG APG PHS TKPYV SKGRKFE+ARGR
Sbjct: 120 MTFDQLALAAPKGQNTVLLSGPRKAREVYRHFGKAPGTPHSRTKPYVLSKGRKFERARGR 179
Query: 609 RNSRGFK 629
R SRG+K
Sbjct: 180 RASRGYK 186
>sw|Q9I836|RL18_OREMO 60S ribosomal protein L18.
Length = 187
Score = 242 bits (618), Expect = 4e-63
Identities = 117/187 (62%), Positives = 150/187 (80%), Gaps = 2/187 (1%)
Frame = +3
Query: 75 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPP 254
G+D + +++K R PKS D+YL+LLVKLYRFL RR+ + FN V+L+RLFMS+TNRPP
Sbjct: 1 GVD-IRHNKDRKVHRKEPKSQDIYLRLLVKLYRFLARRSNAPFNRVVLRRLFMSRTNRPP 59
Query: 255 LSMRRLVRFME--GKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGEC 428
+++ RL+R M+ G+ ++IAV+VGTVTDD RI ++P +K+CALR T+ AR RI+ AGG+
Sbjct: 60 IAVSRLIRKMKLPGRENKIAVVVGTVTDDVRIQDIPKLKICALRVTDGARRRILKAGGQV 119
Query: 429 LTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGR 608
+TFDQLAL +P GQ TVLL GP+ ARE RHFG APG PHSHTKPYVRSKGRKFE+ARGR
Sbjct: 120 MTFDQLALASPKGQGTVLLSGPRKAREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGR 179
Query: 609 RNSRGFK 629
R S G+K
Sbjct: 180 RASCGYK 186
>sptr|Q9VS34|Q9VS34 CG8615 protein (Ribosomal protein L18)
(RH01814p).
Length = 188
Score = 241 bits (614), Expect = 1e-62
Identities = 121/188 (64%), Positives = 147/188 (78%), Gaps = 2/188 (1%)
Frame = +3
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
MGID + ++K +RT PKS DVYL+LLVKLYRFL RRT FN +ILKRLFMSK NRP
Sbjct: 1 MGID-INHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRP 59
Query: 252 PLSMRRLVRFMEGKG--DQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGE 425
PLS++R+ RF + + V+VGTVTDD R+ VP + VCAL T+TAR RI+ AGGE
Sbjct: 60 PLSLQRIARFFKAANQPESTIVVVGTVTDDARLLVVPKLTVCALHVTQTARERILKAGGE 119
Query: 426 CLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARG 605
LTFDQLALR+P G+NT+LL+G + AR A +HFG APGVPHSHT+PYVRSKGRKFE+ARG
Sbjct: 120 VLTFDQLALRSPTGKNTLLLQGRRTARTACKHFGKAPGVPHSHTRPYVRSKGRKFERARG 179
Query: 606 RRNSRGFK 629
RR+S G+K
Sbjct: 180 RRSSCGYK 187
>sw|P09897|RLNA_XENLA 60S ribosomal protein L14A.
Length = 187
Score = 237 bits (604), Expect = 2e-61
Identities = 118/187 (63%), Positives = 146/187 (78%), Gaps = 2/187 (1%)
Frame = +3
Query: 75 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPP 254
GID + +++K +R PKS D+YL+LLVKLYRFL RRT S+FN V+LKRLFMS+TNRPP
Sbjct: 1 GID-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNRVVLKRLFMSRTNRPP 59
Query: 255 LSMRRLVRFME--GKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGEC 428
LSM RL+R M+ + ++ AV+VG +T D RI ++P + VCAL+ T AR+RI+ AGG+
Sbjct: 60 LSMSRLIRKMKLPRRENKTAVVVGCITADVRIHDIPKLTVCALKLTSGARSRILKAGGQI 119
Query: 429 LTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGR 608
+TFDQLAL AP GQNTVLL GP+ ARE RHFG AP PHS TKPYV SKGRKFE+ARGR
Sbjct: 120 MTFDQLALAAPKGQNTVLLSGPRKAREVYRHFGKAPSTPHSRTKPYVLSKGRKFERARGR 179
Query: 609 RNSRGFK 629
R SRG+K
Sbjct: 180 RASRGYK 186
>sptrnew|EAA27337|EAA27337 Hypothetical protein.
Length = 183
Score = 233 bits (594), Expect = 3e-60
Identities = 122/187 (65%), Positives = 141/187 (75%)
Frame = +3
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
MGIDL + T R APKSD+VYLKLLVKLYRFL RRT S FN V+L+RLFMS+ NRP
Sbjct: 1 MGIDL-RKHHERSTHRKAPKSDNVYLKLLVKLYRFLARRTDSAFNKVVLRRLFMSRINRP 59
Query: 252 PLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECL 431
P+S+ R+V ++G + V+VGTVTDD R+ VP + V ALRFT TARARI AGG+ +
Sbjct: 60 PMSISRIVANLKGNEKKTVVVVGTVTDDNRLLTVPKVSVAALRFTATARARIEAAGGQAI 119
Query: 432 TFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRR 611
T DQLAL P G NT+LLRGPKNAREAV+HFG PH H KPYV SKGRKFEKARGRR
Sbjct: 120 TLDQLALEKPTGANTLLLRGPKNAREAVKHFGFG---PHKHKKPYVASKGRKFEKARGRR 176
Query: 612 NSRGFKV 632
S+GFKV
Sbjct: 177 RSKGFKV 183
>sptrnew|EAA20707|EAA20707 Eukaryotic ribosomal protein L18,
putative.
Length = 243
Score = 227 bits (579), Expect = 1e-58
Identities = 117/186 (62%), Positives = 137/186 (73%)
Frame = +3
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
MGIDL GR KK R S + YL+LLVKLYRFL RRT NFN +I KRL M K RP
Sbjct: 57 MGIDLKNVGRIKKHGRKNLVSKNPYLRLLVKLYRFLARRTDVNFNKIIAKRLIMPKRFRP 116
Query: 252 PLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECL 431
PLS+ +L + M + +AV+VG++TDDKR+ MKVCALRFTETAR RI++AGGECL
Sbjct: 117 PLSLSKLQQHMSNNQNSVAVVVGSITDDKRLFSCRNMKVCALRFTETARKRIVDAGGECL 176
Query: 432 TFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRR 611
TFDQLALR P G++ +LLRGP AR A +HFG APG P S +PYVRSKGRKFEKARGRR
Sbjct: 177 TFDQLALRYPTGKDCILLRGPTKARTAEKHFGSAPGRPKSKARPYVRSKGRKFEKARGRR 236
Query: 612 NSRGFK 629
SR +K
Sbjct: 237 KSRAYK 242
>sptr|Q98SG3|Q98SG3 Ribosomal protein L18 (Fragment).
Length = 180
Score = 226 bits (575), Expect = 4e-58
Identities = 108/179 (60%), Positives = 140/179 (78%), Gaps = 2/179 (1%)
Frame = +3
Query: 99 RNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPLSMRRLVR 278
+++K + PKS D+YL+LL KLYRFL RR+ + FN V+L+ LFMS+T+RPP+S+ R++R
Sbjct: 2 KDRKVRPKEPKSQDIYLRLLDKLYRFLARRSTAPFNKVVLRWLFMSRTHRPPMSVSRMIR 61
Query: 279 FME--GKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLAL 452
M+ G+ ++ AV+VGTVTDD RI ++P +KVCAL+ T R RI+ AGG+ +TFDQLAL
Sbjct: 62 KMKLPGRENRTAVVVGTVTDDVRIQDIPKLKVCALKVTRRLRTRILKAGGQIMTFDQLAL 121
Query: 453 RAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 629
AP GQ TVLL GP+ A + RHFG PG PHSHTKPYVRSKGRKFE+ARGRR SRG+K
Sbjct: 122 AAPKGQGTVLLSGPRKAPDVSRHFGKVPGTPHSHTKPYVRSKGRKFERARGRRASRGYK 180
>sptrnew|EAA04761|EAA04761 AgCP3167 (Fragment).
Length = 202
Score = 226 bits (575), Expect = 4e-58
Identities = 111/189 (58%), Positives = 146/189 (77%), Gaps = 3/189 (1%)
Frame = +3
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
MGID + ++K +RT PKS DVYL LLVKLYRFL RRTK FN ++++RLFMS+TN P
Sbjct: 14 MGID-INHKWDRKVRRTRPKSLDVYLSLLVKLYRFLYRRTKKKFNKIVMRRLFMSRTNHP 72
Query: 252 PLSMRRLVRFMEGKGDQ---IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGG 422
P+S+ R+ M+ +G +AV++GTVT+D R+ +VP + VCALR T+ AR RI+ GG
Sbjct: 73 PMSLNRVAHLMKLRGKDEKSVAVVIGTVTNDVRMMDVPKLNVCALRVTDKARQRILKNGG 132
Query: 423 ECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKAR 602
+ TFDQLAL +P G+NTVL++G + ARE +HFG APGVPHS+T+PYV+SKGRKFEKAR
Sbjct: 133 KIYTFDQLALLSPTGRNTVLMQGKRTAREVFKHFGRAPGVPHSNTRPYVQSKGRKFEKAR 192
Query: 603 GRRNSRGFK 629
GRR+S G+K
Sbjct: 193 GRRSSCGYK 201
>sw|P07279|RL18_YEAST 60S ribosomal protein L18 (RP28).
Length = 186
Score = 222 bits (566), Expect = 5e-57
Identities = 115/189 (60%), Positives = 139/189 (73%), Gaps = 2/189 (1%)
Frame = +3
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
MGID + + RTAPKSD+VYLKLLVKLY FL RRT + FN V+LK LF+SK NRP
Sbjct: 1 MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRP 60
Query: 252 PLSMRRLVRFM--EGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGE 425
P+S+ R+ R + EG ++ V+VGTVTDD RI E P V ALRFT ARA+I+ AGGE
Sbjct: 61 PVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGE 120
Query: 426 CLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARG 605
C+T DQLA+RAP GQNT++LRGP+N+REAVRHFG PH P + S GRKFE+ARG
Sbjct: 121 CITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMG---PHKGKAPRILSTGRKFERARG 177
Query: 606 RRNSRGFKV 632
RR S+GFKV
Sbjct: 178 RRRSKGFKV 186
>sptr|Q962Y8|Q962Y8 Ribosomal protein L18.
Length = 183
Score = 222 bits (565), Expect = 6e-57
Identities = 118/184 (64%), Positives = 140/184 (76%), Gaps = 2/184 (1%)
Frame = +3
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
MGID + ++K +RT KS DVYL+LLVKLYR+L RRT S FN +IL+RLFMS+ NRP
Sbjct: 1 MGID-INHKHDRKVRRTEVKSQDVYLRLLVKLYRYLARRTNSKFNTIILRRLFMSRINRP 59
Query: 252 PLSMRRLVRFMEG--KGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGE 425
PLS+ RL R M+ + IAV+VGT+T+D R+ +VP M V AL TE ARARI+ AGGE
Sbjct: 60 PLSLSRLARHMKKPTREGMIAVVVGTITNDVRLYKVPKMSVAALHVTEKARARILAAGGE 119
Query: 426 CLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARG 605
LTFDQLALRAP G TVLL+G +NAREAVRHFGPAPG P SHTKPYVR+KG E+AR
Sbjct: 120 ILTFDQLALRAPTGAKTVLLQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--ERARP 177
Query: 606 RRNS 617
RR S
Sbjct: 178 RRRS 181
>sptr|O45946|O45946 Y45F10D.12 protein.
Length = 188
Score = 222 bits (565), Expect = 6e-57
Identities = 113/188 (60%), Positives = 143/188 (76%), Gaps = 2/188 (1%)
Frame = +3
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
MGID + ++ +RTAPKS++ YL+LL KLY FL RRT FNA++LKRL MS+ NR
Sbjct: 1 MGID-INHKHDRVARRTAPKSENPYLRLLSKLYAFLARRTGEKFNAIVLKRLRMSRRNRQ 59
Query: 252 PLSMRRLVRFMEGKGDQIAVIV--GTVTDDKRISEVPAMKVCALRFTETARARIINAGGE 425
PLS+ +L R ++ G++ +V TVTDD R+ VP + V AL TE ARARI+ AGGE
Sbjct: 60 PLSLAKLARAVQKAGNENKTVVTLSTVTDDARLYTVPKISVAALHVTEGARARILAAGGE 119
Query: 426 CLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARG 605
+T DQLAL++P G+NTV L+GP++AREA +HFGPAPGVPHSHTKPYVRSKGRKFE+ARG
Sbjct: 120 IITLDQLALKSPKGENTVFLQGPRSAREAEKHFGPAPGVPHSHTKPYVRSKGRKFERARG 179
Query: 606 RRNSRGFK 629
RR SR +K
Sbjct: 180 RRASRAYK 187
>sptr|Q8TFH1|Q8TFH1 60S ribosomal protein L18.
Length = 187
Score = 221 bits (564), Expect = 8e-57
Identities = 119/191 (62%), Positives = 140/191 (73%), Gaps = 4/191 (2%)
Frame = +3
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
MGID + +K++R+ P S++VYLKLLVKLYRFL RRT S FN ILKRLF SKTNRP
Sbjct: 1 MGID-IERHHVRKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRP 59
Query: 252 PLSMRRLVRFMEGKGDQI----AVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAG 419
P+S+ ++ K + VIVGTVTDD+R+ VP + V ALRFT++ARARI+ AG
Sbjct: 60 PISISKIAALTSRKSASLEGKTTVIVGTVTDDERLLTVPKLSVAALRFTKSARARILKAG 119
Query: 420 GECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKA 599
GE LT DQLALRAP G NTVLLRG K+AREA RHFG PH H PYVRS+GRKFE+A
Sbjct: 120 GEVLTLDQLALRAPTGSNTVLLRGKKHAREAYRHFGFG---PHKHKAPYVRSEGRKFERA 176
Query: 600 RGRRNSRGFKV 632
RGRR SR FKV
Sbjct: 177 RGRRKSRAFKV 187
>sw|Q10192|RL18_SCHPO 60S ribosomal protein L18.
Length = 187
Score = 221 bits (562), Expect = 1e-56
Identities = 117/191 (61%), Positives = 141/191 (73%), Gaps = 4/191 (2%)
Frame = +3
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
MGID + KK++R+ P S++VYLKLLVKLYRFL RRT S FN ILKRLF SKTNRP
Sbjct: 1 MGID-IERHHVKKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRP 59
Query: 252 PLSMRRLVRFMEGKG----DQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAG 419
P+S+ ++ K ++ V+VGTVTDD+R+ VP + + ALRFT++ARARI+ AG
Sbjct: 60 PISISKIAALTSRKSASSQNKTTVVVGTVTDDERMLTVPKLSIAALRFTKSARARILKAG 119
Query: 420 GECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKA 599
GE LT DQLALRAP G NTVL+RG K+AREA RHFG PH H PYVRS+GRKFE+A
Sbjct: 120 GEVLTLDQLALRAPTGSNTVLVRGKKHAREAYRHFGFG---PHKHKAPYVRSEGRKFERA 176
Query: 600 RGRRNSRGFKV 632
RGRR SR FKV
Sbjct: 177 RGRRKSRAFKV 187
>sptr|Q8IDS5|Q8IDS5 60S ribosomal subunit porotein L18, putative.
Length = 193
Score = 218 bits (555), Expect = 9e-56
Identities = 114/185 (61%), Positives = 133/185 (71%)
Frame = +3
Query: 75 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPP 254
GI L GR KK R S + YL+LLVKLY FL RRT +NFN +I KRL M K RPP
Sbjct: 8 GIALKNVGRIKKHGRKHLVSKNPYLRLLVKLYNFLARRTNANFNKIIAKRLIMPKRYRPP 67
Query: 255 LSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLT 434
LS+ +L M + IAV+VG++TDDKR+ + +KVCALRFTETAR RI +AGGECLT
Sbjct: 68 LSLSKLQYHMANHPNDIAVVVGSITDDKRLFSLKQLKVCALRFTETARKRIEDAGGECLT 127
Query: 435 FDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRN 614
FDQLAL+ P G+ VLLRGP AR A +HFG APG P S +PYVRSKGRKFEKARGRR
Sbjct: 128 FDQLALKYPTGKKCVLLRGPTKARTAEKHFGKAPGKPKSKARPYVRSKGRKFEKARGRRK 187
Query: 615 SRGFK 629
SR +K
Sbjct: 188 SRAYK 192
>sptr|Q801I8|Q801I8 Ribosomal protein L18 (Fragment).
Length = 165
Score = 216 bits (549), Expect = 4e-55
Identities = 104/165 (63%), Positives = 126/165 (76%), Gaps = 2/165 (1%)
Frame = +3
Query: 108 KTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPLSMRRLVRFME 287
K +R PKS D+YL+LLVKLYRFL RR+ N V+LKRLF S+TNRPPLS+ RL+R M
Sbjct: 1 KVRRKEPKSQDIYLRLLVKLYRFLARRSPGALNKVVLKRLFTSRTNRPPLSLARLIRKMR 60
Query: 288 --GKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAP 461
G+ + AV+VG + DD R +VP +KVCALR T+ AR RI+ AGG+ +TFDQLAL +P
Sbjct: 61 MPGREGKTAVVVGAIMDDVRTFDVPKLKVCALRVTDVARHRILKAGGQIMTFDQLALASP 120
Query: 462 LGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEK 596
GQ TVLL GP+ RE RHFGPAPG PHSHTKPY+RSKGRKFE+
Sbjct: 121 KGQGTVLLSGPRKGREVYRHFGPAPGAPHSHTKPYIRSKGRKFER 165
>sptr|O22254|O22254 60S ribosomal protein L18, 5'partial (Fragment).
Length = 135
Score = 202 bits (515), Expect = 4e-51
Identities = 102/135 (75%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Frame = +3
Query: 231 MSKTNRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARII 410
MSK N+ PLS+ RLVR+M+GK +IAVIVGTVTDD RI +VPA+ V ALRFTE+ARARI
Sbjct: 1 MSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIH 60
Query: 411 NAGGECLTFDQLALRAPL-GQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRK 587
AGGECLTFDQLAL P +NTVLLRGPKN REAV+HFGPAPGVPHSHTKPYVR G+K
Sbjct: 61 KAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKK 120
Query: 588 FEKARGRRNSRGFKV 632
E ARGRR SRGFKV
Sbjct: 121 IEIARGRRRSRGFKV 135
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 536,885,613
Number of Sequences: 1272877
Number of extensions: 10307745
Number of successful extensions: 29923
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29871
length of database: 406,886,216
effective HSP length: 122
effective length of database: 251,595,222
effective search space used: 42519592518
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)