BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2192890.2.1
(531 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptr|Q9SD80|Q9SD80 Hypothetical 6.1 kDa protein. 69 3e-11
sptr|Q8PGZ7|Q8PGZ7 Lipid A biosynthesis lauroyl acyltransferase. 31 9.6
sptr|Q81E74|Q81E74 Transglutaminase-like enzymes, hypothetical c... 31 9.6
sptr|Q81RC9|Q81RC9 Membrane-bound protease, putative. 31 9.6
>sptr|Q9SD80|Q9SD80 Hypothetical 6.1 kDa protein.
Length = 54
Score = 68.9 bits (167), Expect = 3e-11
Identities = 27/48 (56%), Positives = 41/48 (85%)
Frame = +1
Query: 88 AVEKLKVLWDSQVNDEEQWALNYKLLKAAGLFAGSIFLMRNFGDLMAI 231
++EK+K LW S+V+DE++WA+N KLL+A G+FAG + LMR++GDLM +
Sbjct: 7 SIEKMKALWHSEVHDEQKWAVNMKLLRALGMFAGGVVLMRSYGDLMGV 54
>sptr|Q8PGZ7|Q8PGZ7 Lipid A biosynthesis lauroyl acyltransferase.
Length = 306
Score = 30.8 bits (68), Expect = 9.6
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -2
Query: 521 VFFFFFWGATSSLKILITHQIKNYYGCRLIPSFQNIHGTRRILK 390
VF FF S+ I THQ+ GC ++P F G R ILK
Sbjct: 211 VFVPFFGHPAST--ITATHQLARLTGCAVVPYFHRREGGRYILK 252
>sptr|Q81E74|Q81E74 Transglutaminase-like enzymes, hypothetical
cysteine proteases.
Length = 742
Score = 30.8 bits (68), Expect = 9.6
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = -1
Query: 318 NNFHIHSRNYWNIKTTLIGSK*TTLISLLNGHQITEVPHQEDGSRKQTSSLQQLII 151
+N H+++ NY I+T +IG ++SLL +I E H ++ +R+ + L+ L I
Sbjct: 156 HNLHLYNANYAIIRTVVIG---FFMLSLLQVERIKEREHLQNYAREISKLLRPLTI 208
>sptr|Q81RC9|Q81RC9 Membrane-bound protease, putative.
Length = 742
Score = 30.8 bits (68), Expect = 9.6
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = -1
Query: 318 NNFHIHSRNYWNIKTTLIGSK*TTLISLLNGHQITEVPHQEDGSRKQTSSLQQLII 151
+N H+++ NY I+T +IG ++SLL I E H ++ +R+ + L+ L I
Sbjct: 156 HNLHVYNANYAIIRTVVIG---FFMLSLLRIEHIKESEHLQNYAREISKLLKPLTI 208
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 337,995,787
Number of Sequences: 1272877
Number of extensions: 5816454
Number of successful extensions: 12068
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12068
length of database: 406,886,216
effective HSP length: 114
effective length of database: 261,778,238
effective search space used: 16230250756
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)