BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804918.2.5
(733 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptrnew|CAE03942|CAE03942 OSJNBa0093F12.16 protein. 315 4e-85
sptrnew|AAM64365|AAM64365 60S ribosomal protein L12. 297 1e-79
sptrnew|AAO11589|AAO11589 At2g37190/T2N18.5. 297 1e-79
sptrnew|AAK49612|AAK49612 At2g37190/T2N18.5. 297 1e-79
sw|P50883|RL12_ARATH 60S ribosomal protein L12. 297 1e-79
sw|O50003|RL12_PRUAR 60S ribosomal protein L12. 296 1e-79
sptr|Q9LFH5|Q9LFH5 60S ribosomal protein L12-like protein. 296 2e-79
sptr|Q9FF52|Q9FF52 60S ribosomal protein L12 (AT5g60670/mup24_80). 293 1e-78
sptr|Q9ZSL1|Q9ZSL1 Ribosomal protein L12 (Fragment). 258 4e-68
sw|O75000|RL12_SCHPO 60S ribosomal protein L12. 255 5e-67
sw|P50884|RL12_CHLRE 60S ribosomal protein L12 (Fragment). 247 1e-64
sptr|Q8AVW0|Q8AVW0 Similar to ribosomal protein L12. 240 2e-62
sptrnew|EAA13967|EAA13967 AgCP8207 (Fragment). 239 2e-62
sw|P35979|RL12_MOUSE 60S ribosomal protein L12. 239 3e-62
sw|P30050|RL12_HUMAN 60S ribosomal protein L12. 238 5e-62
sw|P23358|RL12_RAT 60S ribosomal protein L12. 237 1e-61
sptr|Q7ZUG1|Q7ZUG1 Similar to ribosomal protein L12. 237 1e-61
sptrnew|AAM68299|AAM68299 CG3195-PA (CG3195-PB). 236 3e-61
sptr|Q9W1B9|Q9W1B9 RE28824p. 236 3e-61
sptrnew|EAA32167|EAA32167 Hypothetical protein. 233 2e-60
sw|Q9C285|RL12_NEUCR 60S ribosomal protein L12. 233 2e-60
sptr|Q90YV6|Q90YV6 Ribosomal protein L12. 232 4e-60
sw|O62290|RL12_CAEEL 60S ribosomal protein L12. 232 4e-60
sptr|Q8C2K0|Q8C2K0 Ribosomal protein L12. 232 4e-60
sptr|Q9NQ02|Q9NQ02 DJ999L4.1 (Novel protein similar to ribosomal... 229 4e-59
sptr|Q95V38|Q95V38 Ribosomal protein L12. 228 8e-59
sptr|Q9NFW1|Q9NFW1 L12 ribosomal protein. 226 2e-58
sptr|Q8ITA1|Q8ITA1 Ribosomal protein L12. 224 7e-58
sptrnew|CAA16156|CAA16156 CICK0721Q.2 (60S Ribosomal Protein L12... 224 1e-57
sptr|O60886|O60886 60S ribosomal protein L12 like protein. 224 1e-57
>sptrnew|CAE03942|CAE03942 OSJNBa0093F12.16 protein.
Length = 166
Score = 315 bits (807), Expect = 4e-85
Identities = 160/166 (96%), Positives = 164/166 (98%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPKLDP+QVV+VFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1 MPPKLDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDV+EIAR MRNR
Sbjct: 61 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARIMRNR 120
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 223
SMAKE+AGTVKEILGTCVSVGCTVDGKDPKDLQQEI DGEVEIPSA
Sbjct: 121 SMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQQEISDGEVEIPSA 166
>sptrnew|AAM64365|AAM64365 60S ribosomal protein L12.
Length = 166
Score = 297 bits (760), Expect = 1e-79
Identities = 148/164 (90%), Positives = 159/164 (96%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPKLDPSQ+V+V+VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVT
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKVKNIKH+GNIS DDV EIAR MR R
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPR 120
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIP 229
S+AKEL+GTV+EILGTCVSVGCTVDGKDPKD+QQEI DGEVEIP
Sbjct: 121 SIAKELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVEIP 164
>sptrnew|AAO11589|AAO11589 At2g37190/T2N18.5.
Length = 166
Score = 297 bits (760), Expect = 1e-79
Identities = 148/164 (90%), Positives = 159/164 (96%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPKLDPSQ+V+V+VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVT
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKVKNIKH+GNIS DDV EIAR MR R
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPR 120
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIP 229
S+AKEL+GTV+EILGTCVSVGCTVDGKDPKD+QQEI DGEVEIP
Sbjct: 121 SIAKELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVEIP 164
>sptrnew|AAK49612|AAK49612 At2g37190/T2N18.5.
Length = 166
Score = 297 bits (760), Expect = 1e-79
Identities = 148/164 (90%), Positives = 159/164 (96%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPKLDPSQ+V+V+VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVT
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKVKNIKH+GNIS DDV EIAR MR R
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPR 120
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIP 229
S+AKEL+GTV+EILGTCVSVGCTVDGKDPKD+QQEI DGEVEIP
Sbjct: 121 SIAKELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVEIP 164
>sw|P50883|RL12_ARATH 60S ribosomal protein L12.
Length = 166
Score = 297 bits (760), Expect = 1e-79
Identities = 148/164 (90%), Positives = 159/164 (96%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPKLDPSQ+V+V+VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVT
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKVKNIKH+GNIS DDV EIAR MR R
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPR 120
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIP 229
S+AKEL+GTV+EILGTCVSVGCTVDGKDPKD+QQEI DGEVEIP
Sbjct: 121 SIAKELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVEIP 164
>sw|O50003|RL12_PRUAR 60S ribosomal protein L12.
Length = 166
Score = 296 bits (759), Expect = 1e-79
Identities = 150/164 (91%), Positives = 158/164 (96%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPK DPSQVV+V+VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETA DWKGLRVT
Sbjct: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETANDWKGLRVT 60
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKK KNIKHSG+ISLDDV+EIA+ M++R
Sbjct: 61 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHSGHISLDDVIEIAKIMKHR 120
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIP 229
SMAKELAGTVKEIL TCVSVGCTVDGKDPKDLQQEI DG+VEIP
Sbjct: 121 SMAKELAGTVKEILRTCVSVGCTVDGKDPKDLQQEIADGDVEIP 164
>sptr|Q9LFH5|Q9LFH5 60S ribosomal protein L12-like protein.
Length = 166
Score = 296 bits (757), Expect = 2e-79
Identities = 147/164 (89%), Positives = 159/164 (96%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPKLDPSQ+V+V+VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVT
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKVKNIKH+GNIS DDV EIAR MR R
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPR 120
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIP 229
S+AKEL+GTV+EILGTCVSVGCTVDGKDPKDLQQEI +GE+EIP
Sbjct: 121 SIAKELSGTVREILGTCVSVGCTVDGKDPKDLQQEIQEGEIEIP 164
>sptr|Q9FF52|Q9FF52 60S ribosomal protein L12 (AT5g60670/mup24_80).
Length = 166
Score = 293 bits (751), Expect = 1e-78
Identities = 144/165 (87%), Positives = 161/165 (97%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPKLDPSQ+V+V+VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVT
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKVKNIKH+GNIS DDV+EIA+ MR R
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVIEIAKIMRPR 120
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 226
S+AKEL+GTVKEILGTCVSVGCTVDGKDPKDLQ+EI+ G+++IP+
Sbjct: 121 SIAKELSGTVKEILGTCVSVGCTVDGKDPKDLQEEINSGDIDIPN 165
>sptr|Q9ZSL1|Q9ZSL1 Ribosomal protein L12 (Fragment).
Length = 142
Score = 258 bits (660), Expect = 4e-68
Identities = 132/142 (92%), Positives = 136/142 (95%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPK DPSQVV+V+VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKLTV NRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDV+ IA+ MR R
Sbjct: 61 VKLTVXNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIXIAKVMRPR 120
Query: 360 SMAKELAGTVKEILGTCVSVGC 295
SMAKEL GTVKEILGTCVSVGC
Sbjct: 121 SMAKELQGTVKEILGTCVSVGC 142
>sw|O75000|RL12_SCHPO 60S ribosomal protein L12.
Length = 165
Score = 255 bits (651), Expect = 5e-67
Identities = 124/164 (75%), Positives = 146/164 (89%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPK DP++V +F+R GGEV S+LAPKIGPLGLSPKK+GEDIAK T KDWKGLRVT
Sbjct: 1 MPPKFDPNEVKTIFMRAVGGEVAGGSTLAPKIGPLGLSPKKVGEDIAKAT-KDWKGLRVT 59
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKLT+QNRQA VSVVPSA+ALVIKALKEP RDRKK KN+ HSGN+SLD+++E+ARTMR +
Sbjct: 60 VKLTIQNRQAAVSVVPSASALVIKALKEPARDRKKDKNVAHSGNVSLDEIIEVARTMRFK 119
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIP 229
S+AKEL+GTVKEILGT SVGCTVDGK+P D+Q+EID+GE+EIP
Sbjct: 120 SLAKELSGTVKEILGTAFSVGCTVDGKNPHDVQKEIDNGEIEIP 163
>sw|P50884|RL12_CHLRE 60S ribosomal protein L12 (Fragment).
Length = 157
Score = 247 bits (631), Expect = 1e-64
Identities = 124/157 (78%), Positives = 138/157 (87%)
Frame = -2
Query: 693 VVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ 514
VVEV VRVTGGEVG ASSLAPKIGPLGLSPKKIGEDIAKET KDWKGLR+TVKLTVQNRQ
Sbjct: 1 VVEVCVRVTGGEVGDASSLAPKIGPLGLSPKKIGEDIAKETLKDWKGLRITVKLTVQNRQ 60
Query: 513 AKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNRSMAKELAGT 334
AK+SV+PSAAALVIKALKEP RDRKK KNIKH+G++++ D++EIAR MR RS AK+LA
Sbjct: 61 AKISVIPSAAALVIKALKEPARDRKKEKNIKHTGSVTMSDIIEIARVMRPRSCAKDLANG 120
Query: 333 VKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 223
KEILGT VSVGC VDGKDP+D+ IDDG +EIP A
Sbjct: 121 CKEILGTAVSVGCKVDGKDPRDVISAIDDGAIEIPDA 157
>sptr|Q8AVW0|Q8AVW0 Similar to ribosomal protein L12.
Length = 165
Score = 240 bits (612), Expect = 2e-62
Identities = 115/166 (69%), Positives = 144/166 (86%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPKLDP+++ V +R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 1 MPPKLDPNEIKVVCLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 59
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIS+D+V+ IAR MR+R
Sbjct: 60 VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHNGNISMDEVINIARQMRHR 119
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 223
S+A+EL+GT+KEILGT SVGC VDG+ P D+ +I+ GE+E P++
Sbjct: 120 SLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGELECPAS 165
>sptrnew|EAA13967|EAA13967 AgCP8207 (Fragment).
Length = 174
Score = 239 bits (611), Expect = 2e-62
Identities = 116/165 (70%), Positives = 139/165 (84%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPK DP++V V++R GGEVGA SSLAPKIGPLGLSPKKIG+DIAK T DWKGL++T
Sbjct: 10 MPPKFDPNEVKHVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATG-DWKGLKIT 68
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
V LT+QNRQA +SVVPSAA+L++KALKEP RDRKKVKNIKH+GNI+ D+V+ IAR MR R
Sbjct: 69 VCLTIQNRQAAISVVPSAASLIVKALKEPPRDRKKVKNIKHNGNITFDEVINIARVMRPR 128
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 226
SMA+ELAGT KE+LGT SVGCT+DG+ P D+ +I G +EIPS
Sbjct: 129 SMARELAGTCKEVLGTAQSVGCTIDGRSPHDVIDDISSGAIEIPS 173
>sw|P35979|RL12_MOUSE 60S ribosomal protein L12.
Length = 165
Score = 239 bits (609), Expect = 3e-62
Identities = 115/166 (69%), Positives = 142/166 (85%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPK DP++V V++R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 1 MPPKFDPNEVKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 59
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKHSGNI+ D++V IAR MR+R
Sbjct: 60 VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHR 119
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 223
S+A+EL+GT+KEILGT SVGC VDG+ P D+ +I+ G VE P++
Sbjct: 120 SLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECPAS 165
>sw|P30050|RL12_HUMAN 60S ribosomal protein L12.
Length = 165
Score = 238 bits (608), Expect = 5e-62
Identities = 114/166 (68%), Positives = 142/166 (85%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPK DP+++ V++R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 59
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKHSGNI+ D++V IAR MR+R
Sbjct: 60 VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHR 119
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 223
S+A+EL+GT+KEILGT SVGC VDG+ P D+ +I+ G VE P++
Sbjct: 120 SLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECPAS 165
>sw|P23358|RL12_RAT 60S ribosomal protein L12.
Length = 165
Score = 237 bits (605), Expect = 1e-61
Identities = 113/166 (68%), Positives = 142/166 (85%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPK DP+++ V++R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 59
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNI+ D++V IAR MR+R
Sbjct: 60 VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHNGNITFDEIVNIARQMRHR 119
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 223
S+A+EL+GT+KEILGT SVGC VDG+ P D+ +I+ G VE P++
Sbjct: 120 SLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECPAS 165
>sptr|Q7ZUG1|Q7ZUG1 Similar to ribosomal protein L12.
Length = 165
Score = 237 bits (604), Expect = 1e-61
Identities = 114/165 (69%), Positives = 141/165 (85%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPK DP+++ VF+R TGGEVGA SSLAPKIGPLGLSPKK+G+DIAK T DWKG R+T
Sbjct: 1 MPPKFDPNEIKVVFMRCTGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATG-DWKGPRIT 59
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKLT+QNRQA + VVPSA+AL+IKALKEP RDRKKVKNIKHSG+++ D++V IAR MR+R
Sbjct: 60 VKLTIQNRQAAIEVVPSASALIIKALKEPPRDRKKVKNIKHSGSVAFDEIVNIARVMRHR 119
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 226
S+A+EL+GT+KEILGT SVGCT+DG+ P D+ +I+ G VE P+
Sbjct: 120 SIARELSGTIKEILGTAQSVGCTIDGRLPHDVIDDINSGAVECPT 164
>sptrnew|AAM68299|AAM68299 CG3195-PA (CG3195-PB).
Length = 165
Score = 236 bits (601), Expect = 3e-61
Identities = 115/165 (69%), Positives = 139/165 (84%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPK DP++V V++R GGEVGA SSLAPKIGPLGLSPKKIG+DIAK T+ DWKGL++T
Sbjct: 1 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATS-DWKGLKIT 59
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
V LT+QNRQA +SVVPSAA+L+IKALKEP RDRKK KNIKHSGNI +D++ IAR MR R
Sbjct: 60 VCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPR 119
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 226
SMA+EL GT KE+LGT SVGCTVDGK P D+ E+++G +E+P+
Sbjct: 120 SMARELKGTCKEVLGTAQSVGCTVDGKHPHDVIDELNEGSIEVPA 164
>sptr|Q9W1B9|Q9W1B9 RE28824p.
Length = 165
Score = 236 bits (601), Expect = 3e-61
Identities = 115/165 (69%), Positives = 139/165 (84%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPK DP++V V++R GGEVGA SSLAPKIGPLGLSPKKIG+DIAK T+ DWKGL++T
Sbjct: 1 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATS-DWKGLKIT 59
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
V LT+QNRQA +SVVPSAA+L+IKALKEP RDRKK KNIKHSGNI +D++ IAR MR R
Sbjct: 60 VCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPR 119
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 226
SMA+EL GT KE+LGT SVGCTVDGK P D+ E+++G +E+P+
Sbjct: 120 SMARELKGTCKEVLGTAQSVGCTVDGKHPHDVIDELNEGSIEVPA 164
>sptrnew|EAA32167|EAA32167 Hypothetical protein.
Length = 165
Score = 233 bits (594), Expect = 2e-60
Identities = 115/164 (70%), Positives = 139/164 (84%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPK DP++V + +R TGGEVGA+S+LAPKIGPLGLSPKK+GEDIAK T DWKGLRVT
Sbjct: 1 MPPKFDPNEVKVITLRATGGEVGASSALAPKIGPLGLSPKKVGEDIAKATG-DWKGLRVT 59
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKLT+QNRQA VSVVP+A+ALVI+ALKEP RDRKK KNIKH+ ++S D++VEIARTMR +
Sbjct: 60 VKLTIQNRQAAVSVVPTASALVIRALKEPPRDRKKEKNIKHNKSVSFDEIVEIARTMRFK 119
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIP 229
S +KEL GTV E+LGT SVGC VDGK PK +Q+ I GE+++P
Sbjct: 120 SFSKELKGTVLEVLGTAFSVGCQVDGKSPKAVQEAIHAGEIDVP 163
>sw|Q9C285|RL12_NEUCR 60S ribosomal protein L12.
Length = 165
Score = 233 bits (594), Expect = 2e-60
Identities = 115/164 (70%), Positives = 139/164 (84%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPK DP++V + +R TGGEVGA+S+LAPKIGPLGLSPKK+GEDIAK T DWKGLRVT
Sbjct: 1 MPPKFDPNEVKVITLRATGGEVGASSALAPKIGPLGLSPKKVGEDIAKATG-DWKGLRVT 59
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKLT+QNRQA VSVVP+A+ALVI+ALKEP RDRKK KNIKH+ ++S D++VEIARTMR +
Sbjct: 60 VKLTIQNRQAAVSVVPTASALVIRALKEPPRDRKKEKNIKHNKSVSFDEIVEIARTMRFK 119
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIP 229
S +KEL GTV E+LGT SVGC VDGK PK +Q+ I GE+++P
Sbjct: 120 SFSKELKGTVLEVLGTAFSVGCQVDGKSPKAVQEAIHAGEIDVP 163
>sptr|Q90YV6|Q90YV6 Ribosomal protein L12.
Length = 167
Score = 232 bits (591), Expect = 4e-60
Identities = 112/162 (69%), Positives = 138/162 (85%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPK DP+++ V++R TGGEVGA SSLAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 1 MPPKFDPNEIKIVYMRCTGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 59
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKLT+QNRQA + VVPSA+AL+IKALKEP RDRKKVKNIKHSG++ D++V IAR MR R
Sbjct: 60 VKLTIQNRQAAIEVVPSASALIIKALKEPPRDRKKVKNIKHSGSVPFDEIVNIARVMRPR 119
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVE 235
S+A+EL+GT+KEILGT SVGCT+DG+ P D+ +I+ G+ E
Sbjct: 120 SIARELSGTIKEILGTAQSVGCTIDGRLPHDVIDDINSGKQE 161
>sw|O62290|RL12_CAEEL 60S ribosomal protein L12.
Length = 165
Score = 232 bits (591), Expect = 4e-60
Identities = 110/165 (66%), Positives = 141/165 (85%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPK DP+++ V++R GGEVGA S+LAPK+GPLGLSPKKIGEDIAK T +DWKGL+VT
Sbjct: 1 MPPKFDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKAT-QDWKGLKVT 59
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
KLT+QNR AK+ VVPSAA+L++K LKEP RDRKKVKN+KH+G++++D +++IAR MR R
Sbjct: 60 CKLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNGDLTVDTIIKIARIMRPR 119
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 226
SMAK+L GTVKEILGT SVGCT+DG+ P D+ + I +GE+EIP+
Sbjct: 120 SMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIEIPA 164
>sptr|Q8C2K0|Q8C2K0 Ribosomal protein L12.
Length = 164
Score = 232 bits (591), Expect = 4e-60
Identities = 113/165 (68%), Positives = 139/165 (84%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPK DP++V V++R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 1 MPPKFDPNEVKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 59
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKHSGNI+ D++V IAR MR+R
Sbjct: 60 VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHR 119
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 226
S+A+EL+GT+KEILGT SVGC VDG+ P D+ +I+ +PS
Sbjct: 120 SLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSWCSGVPS 164
>sptr|Q9NQ02|Q9NQ02 DJ999L4.1 (Novel protein similar to ribosomal
protein L12 (RPL12)).
Length = 165
Score = 229 bits (583), Expect = 4e-59
Identities = 110/166 (66%), Positives = 139/166 (83%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
M PK DP+++ V++R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK DWKGLR+T
Sbjct: 1 MLPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKAMG-DWKGLRIT 59
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKLT+QNRQA++ VVPSA+A++IKALKEP RDRKK KNIKHSGNI+ D++V IAR MR++
Sbjct: 60 VKLTIQNRQAQIEVVPSASAMIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHQ 119
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 223
S+A+EL+GT KEILGT SVGC VDG+ P D+ +I+ G VE P++
Sbjct: 120 SLARELSGTTKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECPAS 165
>sptr|Q95V38|Q95V38 Ribosomal protein L12.
Length = 164
Score = 228 bits (580), Expect = 8e-59
Identities = 113/163 (69%), Positives = 139/163 (85%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPK DP+++ V +R GGEVGA SSLAPKIGPLGLSPKK+G+DIAK T+ DWKGL++T
Sbjct: 1 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKIT 59
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
V+L VQNRQA++SVVPSAAAL+I+ALKEP RDRKK KNIKH+GNI+L+DV+ IA+TMR R
Sbjct: 60 VQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNITLEDVISIAKTMRAR 119
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEI 232
SMA+ L+GTVKEILGT SVGCTV+G+ P DL +I+ G + I
Sbjct: 120 SMARYLSGTVKEILGTAQSVGCTVEGRPPHDLINDINSGALTI 162
>sptr|Q9NFW1|Q9NFW1 L12 ribosomal protein.
Length = 165
Score = 226 bits (577), Expect = 2e-58
Identities = 109/166 (65%), Positives = 137/166 (82%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
M PK DP+ + V++RV GGEVGA SSLAPKIGPLGLSPKK+G+DIAK T +WKGL+VT
Sbjct: 1 MGPKFDPTAITIVYLRVIGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATG-EWKGLKVT 59
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKL +QNR A +SVVPSAA+L+IK LKEP RDRKKVK++KH+G+I+LD++ +IAR MR R
Sbjct: 60 VKLVIQNRNATISVVPSAASLIIKYLKEPPRDRKKVKHVKHNGDITLDNIFDIARQMRER 119
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 223
S+A++ +GTVKEILGT SVGCT+DGK P D+ + I GE+E P A
Sbjct: 120 SLARKFSGTVKEILGTAQSVGCTIDGKSPHDIIESIQSGEIECPEA 165
>sptr|Q8ITA1|Q8ITA1 Ribosomal protein L12.
Length = 165
Score = 224 bits (572), Expect = 7e-58
Identities = 110/164 (67%), Positives = 137/164 (83%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPK DP+ + V+V+ GGEV A SSLAPKIGPLGLSPKKIG+DI+K T ++WKGL++T
Sbjct: 1 MPPKFDPTAIKVVYVKAVGGEVPATSSLAPKIGPLGLSPKKIGDDISKST-QEWKGLKIT 59
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKL VQNRQAKV VVPSA++LVIKALKEP RDRKKVK++KH+GNIS+D+++ IAR MR R
Sbjct: 60 VKLVVQNRQAKVEVVPSASSLVIKALKEPPRDRKKVKHVKHNGNISMDEIIRIARIMRPR 119
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIP 229
SMA+ LAGT KEILGT SVGC+V+ P D+ +I+ GE+E+P
Sbjct: 120 SMARNLAGTCKEILGTAQSVGCSVEKCPPHDVIDKINSGEIEVP 163
>sptrnew|CAA16156|CAA16156 CICK0721Q.2 (60S Ribosomal Protein L12
LIKE protein).
Length = 165
Score = 224 bits (570), Expect = 1e-57
Identities = 107/166 (64%), Positives = 138/166 (83%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPK DP+++ V++R T GEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 1 MPPKFDPNEIKVVYLRCTRGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 59
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKLT++NRQA++ VVPSA+A +IKALK+P RDRKK KNIKH+GNI+ D++V IAR MR+R
Sbjct: 60 VKLTIENRQAQIEVVPSASAPIIKALKKPPRDRKKQKNIKHNGNITFDEIVNIARQMRHR 119
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 223
S+A+EL+GT+KEI GT S+GC VDG P D+ +I+ G VE P++
Sbjct: 120 SLARELSGTIKEIPGTAQSMGCNVDGHHPHDIIDDINSGAVECPAS 165
>sptr|O60886|O60886 60S ribosomal protein L12 like protein.
Length = 165
Score = 224 bits (570), Expect = 1e-57
Identities = 107/166 (64%), Positives = 138/166 (83%)
Frame = -2
Query: 720 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
MPPK DP+++ V++R T GEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 1 MPPKFDPNEIKVVYLRCTRGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 59
Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVVEIARTMRNR 361
VKLT++NRQA++ VVPSA+A +IKALK+P RDRKK KNIKH+GNI+ D++V IAR MR+R
Sbjct: 60 VKLTIENRQAQIEVVPSASAPIIKALKKPPRDRKKQKNIKHNGNITFDEIVNIARQMRHR 119
Query: 360 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 223
S+A+EL+GT+KEI GT S+GC VDG P D+ +I+ G VE P++
Sbjct: 120 SLARELSGTIKEIPGTAQSMGCNVDGHHPHDIIDDINSGAVECPAS 165
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 358,550,540
Number of Sequences: 1272877
Number of extensions: 6898910
Number of successful extensions: 28558
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28464
length of database: 406,886,216
effective HSP length: 119
effective length of database: 255,413,853
effective search space used: 31671317772
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)