BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804918.2.3
(985 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptrnew|CAE03942|CAE03942 OSJNBa0093F12.16 protein. 306 3e-82
sw|O50003|RL12_PRUAR 60S ribosomal protein L12. 292 4e-78
sptrnew|AAM64365|AAM64365 60S ribosomal protein L12. 289 4e-77
sptrnew|AAO11589|AAO11589 At2g37190/T2N18.5. 289 4e-77
sptrnew|AAK49612|AAK49612 At2g37190/T2N18.5. 289 4e-77
sw|P50883|RL12_ARATH 60S ribosomal protein L12. 289 4e-77
sptr|Q9LFH5|Q9LFH5 60S ribosomal protein L12-like protein. 288 8e-77
sptr|Q9FF52|Q9FF52 60S ribosomal protein L12 (AT5g60670/mup24_80). 286 2e-76
sptr|Q9ZSL1|Q9ZSL1 Ribosomal protein L12 (Fragment). 251 8e-66
sw|O75000|RL12_SCHPO 60S ribosomal protein L12. 249 5e-65
sw|P50884|RL12_CHLRE 60S ribosomal protein L12 (Fragment). 248 1e-64
sptr|Q8AVW0|Q8AVW0 Similar to ribosomal protein L12. 236 5e-61
sw|P35979|RL12_MOUSE 60S ribosomal protein L12. 234 2e-60
sw|P30050|RL12_HUMAN 60S ribosomal protein L12. 233 2e-60
sptrnew|EAA13967|EAA13967 AgCP8207 (Fragment). 233 4e-60
sw|P23358|RL12_RAT 60S ribosomal protein L12. 232 5e-60
sptr|Q7ZUG1|Q7ZUG1 Similar to ribosomal protein L12. 232 7e-60
sptrnew|AAM68299|AAM68299 CG3195-PA (CG3195-PB). 229 6e-59
sptr|Q9W1B9|Q9W1B9 RE28824p. 229 6e-59
sptr|Q9NQ02|Q9NQ02 DJ999L4.1 (Novel protein similar to ribosomal... 228 1e-58
sptr|Q8C2K0|Q8C2K0 Ribosomal protein L12. 227 2e-58
sptrnew|EAA32167|EAA32167 Hypothetical protein. 226 4e-58
sw|Q9C285|RL12_NEUCR 60S ribosomal protein L12. 226 4e-58
sw|O62290|RL12_CAEEL 60S ribosomal protein L12. 225 8e-58
sptr|Q90YV6|Q90YV6 Ribosomal protein L12. 224 1e-57
sptr|Q9NFW1|Q9NFW1 L12 ribosomal protein. 223 3e-57
sptr|Q95V38|Q95V38 Ribosomal protein L12. 221 2e-56
sptrnew|CAA16156|CAA16156 CICK0721Q.2 (60S Ribosomal Protein L12... 219 6e-56
sptr|O60886|O60886 60S ribosomal protein L12 like protein. 219 6e-56
sptr|Q862L6|Q862L6 Similar to ribosomal protein L12 (Fragment). 218 1e-55
>sptrnew|CAE03942|CAE03942 OSJNBa0093F12.16 protein.
Length = 166
Score = 306 bits (784), Expect = 3e-82
Identities = 157/163 (96%), Positives = 161/163 (98%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
KLDP+QVV+VFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL
Sbjct: 4 KLDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 63
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAR MR+RSMA
Sbjct: 64 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARIMRNRSMA 123
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 427
KE+AGTVKEILGTCVSVGCTVDGKDPKDLQQEI DGEVEIPSA
Sbjct: 124 KEMAGTVKEILGTCVSVGCTVDGKDPKDLQQEISDGEVEIPSA 166
>sw|O50003|RL12_PRUAR 60S ribosomal protein L12.
Length = 166
Score = 292 bits (748), Expect = 4e-78
Identities = 149/161 (92%), Positives = 155/161 (96%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
K DPSQVV+V+VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETA DWKGLRVTVKL
Sbjct: 4 KFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETANDWKGLRVTVKL 63
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
TVQNRQAKVSVVPSAAALVIKALKEPERDRKK KNIKHSG+ISLDDVIEIA+ M+HRSMA
Sbjct: 64 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHSGHISLDDVIEIAKIMKHRSMA 123
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIP 433
KELAGTVKEIL TCVSVGCTVDGKDPKDLQQEI DG+VEIP
Sbjct: 124 KELAGTVKEILRTCVSVGCTVDGKDPKDLQQEIADGDVEIP 164
>sptrnew|AAM64365|AAM64365 60S ribosomal protein L12.
Length = 166
Score = 289 bits (740), Expect = 4e-77
Identities = 145/161 (90%), Positives = 156/161 (96%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
KLDPSQ+V+V+VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVTVKL
Sbjct: 4 KLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKL 63
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
TVQNRQAKV+VVPSAAALVIKALKEPERDRKKVKNIKH+GNIS DDV EIAR MR RS+A
Sbjct: 64 TVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPRSIA 123
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIP 433
KEL+GTV+EILGTCVSVGCTVDGKDPKD+QQEI DGEVEIP
Sbjct: 124 KELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVEIP 164
>sptrnew|AAO11589|AAO11589 At2g37190/T2N18.5.
Length = 166
Score = 289 bits (740), Expect = 4e-77
Identities = 145/161 (90%), Positives = 156/161 (96%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
KLDPSQ+V+V+VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVTVKL
Sbjct: 4 KLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKL 63
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
TVQNRQAKV+VVPSAAALVIKALKEPERDRKKVKNIKH+GNIS DDV EIAR MR RS+A
Sbjct: 64 TVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPRSIA 123
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIP 433
KEL+GTV+EILGTCVSVGCTVDGKDPKD+QQEI DGEVEIP
Sbjct: 124 KELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVEIP 164
>sptrnew|AAK49612|AAK49612 At2g37190/T2N18.5.
Length = 166
Score = 289 bits (740), Expect = 4e-77
Identities = 145/161 (90%), Positives = 156/161 (96%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
KLDPSQ+V+V+VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVTVKL
Sbjct: 4 KLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKL 63
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
TVQNRQAKV+VVPSAAALVIKALKEPERDRKKVKNIKH+GNIS DDV EIAR MR RS+A
Sbjct: 64 TVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPRSIA 123
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIP 433
KEL+GTV+EILGTCVSVGCTVDGKDPKD+QQEI DGEVEIP
Sbjct: 124 KELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVEIP 164
>sw|P50883|RL12_ARATH 60S ribosomal protein L12.
Length = 166
Score = 289 bits (740), Expect = 4e-77
Identities = 145/161 (90%), Positives = 156/161 (96%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
KLDPSQ+V+V+VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVTVKL
Sbjct: 4 KLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKL 63
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
TVQNRQAKV+VVPSAAALVIKALKEPERDRKKVKNIKH+GNIS DDV EIAR MR RS+A
Sbjct: 64 TVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPRSIA 123
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIP 433
KEL+GTV+EILGTCVSVGCTVDGKDPKD+QQEI DGEVEIP
Sbjct: 124 KELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVEIP 164
>sptr|Q9LFH5|Q9LFH5 60S ribosomal protein L12-like protein.
Length = 166
Score = 288 bits (737), Expect = 8e-77
Identities = 144/161 (89%), Positives = 156/161 (96%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
KLDPSQ+V+V+VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVTVKL
Sbjct: 4 KLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKL 63
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
TVQNRQAKV+VVPSAAALVIKALKEPERDRKKVKNIKH+GNIS DDV EIAR MR RS+A
Sbjct: 64 TVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPRSIA 123
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIP 433
KEL+GTV+EILGTCVSVGCTVDGKDPKDLQQEI +GE+EIP
Sbjct: 124 KELSGTVREILGTCVSVGCTVDGKDPKDLQQEIQEGEIEIP 164
>sptr|Q9FF52|Q9FF52 60S ribosomal protein L12 (AT5g60670/mup24_80).
Length = 166
Score = 286 bits (733), Expect = 2e-76
Identities = 142/162 (87%), Positives = 158/162 (97%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
KLDPSQ+V+V+VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVTVKL
Sbjct: 4 KLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKL 63
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
TVQNRQAKV+VVPSAAALVIKALKEPERDRKKVKNIKH+GNIS DDVIEIA+ MR RS+A
Sbjct: 64 TVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVIEIAKIMRPRSIA 123
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 430
KEL+GTVKEILGTCVSVGCTVDGKDPKDLQ+EI+ G+++IP+
Sbjct: 124 KELSGTVKEILGTCVSVGCTVDGKDPKDLQEEINSGDIDIPN 165
>sptr|Q9ZSL1|Q9ZSL1 Ribosomal protein L12 (Fragment).
Length = 142
Score = 251 bits (642), Expect = 8e-66
Identities = 130/139 (93%), Positives = 133/139 (95%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
K DPSQVV+V+VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL
Sbjct: 4 KFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 63
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
TV NRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVI IA+ MR RSMA
Sbjct: 64 TVXNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIXIAKVMRPRSMA 123
Query: 555 KELAGTVKEILGTCVSVGC 499
KEL GTVKEILGTCVSVGC
Sbjct: 124 KELQGTVKEILGTCVSVGC 142
>sw|O75000|RL12_SCHPO 60S ribosomal protein L12.
Length = 165
Score = 249 bits (635), Expect = 5e-65
Identities = 122/161 (75%), Positives = 143/161 (88%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
K DP++V +F+R GGEV S+LAPKIGPLGLSPKK+GEDIAK T KDWKGLRVTVKL
Sbjct: 4 KFDPNEVKTIFMRAVGGEVAGGSTLAPKIGPLGLSPKKVGEDIAKAT-KDWKGLRVTVKL 62
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
T+QNRQA VSVVPSA+ALVIKALKEP RDRKK KN+ HSGN+SLD++IE+ARTMR +S+A
Sbjct: 63 TIQNRQAAVSVVPSASALVIKALKEPARDRKKDKNVAHSGNVSLDEIIEVARTMRFKSLA 122
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIP 433
KEL+GTVKEILGT SVGCTVDGK+P D+Q+EID+GE+EIP
Sbjct: 123 KELSGTVKEILGTAFSVGCTVDGKNPHDVQKEIDNGEIEIP 163
>sw|P50884|RL12_CHLRE 60S ribosomal protein L12 (Fragment).
Length = 157
Score = 248 bits (632), Expect = 1e-64
Identities = 125/157 (79%), Positives = 138/157 (87%)
Frame = -2
Query: 897 VVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ 718
VVEV VRVTGGEVG ASSLAPKIGPLGLSPKKIGEDIAKET KDWKGLR+TVKLTVQNRQ
Sbjct: 1 VVEVCVRVTGGEVGDASSLAPKIGPLGLSPKKIGEDIAKETLKDWKGLRITVKLTVQNRQ 60
Query: 717 AKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMAKELAGT 538
AK+SV+PSAAALVIKALKEP RDRKK KNIKH+G++++ D+IEIAR MR RS AK+LA
Sbjct: 61 AKISVIPSAAALVIKALKEPARDRKKEKNIKHTGSVTMSDIIEIARVMRPRSCAKDLANG 120
Query: 537 VKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 427
KEILGT VSVGC VDGKDP+D+ IDDG +EIP A
Sbjct: 121 CKEILGTAVSVGCKVDGKDPRDVISAIDDGAIEIPDA 157
>sptr|Q8AVW0|Q8AVW0 Similar to ribosomal protein L12.
Length = 165
Score = 236 bits (601), Expect = 5e-61
Identities = 114/163 (69%), Positives = 141/163 (86%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
KLDP+++ V +R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKL
Sbjct: 4 KLDPNEIKVVCLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKL 62
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
T+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIS+D+VI IAR MRHRS+A
Sbjct: 63 TIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHNGNISMDEVINIARQMRHRSLA 122
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 427
+EL+GT+KEILGT SVGC VDG+ P D+ +I+ GE+E P++
Sbjct: 123 RELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGELECPAS 165
>sw|P35979|RL12_MOUSE 60S ribosomal protein L12.
Length = 165
Score = 234 bits (596), Expect = 2e-60
Identities = 112/163 (68%), Positives = 139/163 (85%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
K DP++V V++R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKL
Sbjct: 4 KFDPNEVKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKL 62
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
T+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKHSGNI+ D+++ IAR MRHRS+A
Sbjct: 63 TIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLA 122
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 427
+EL+GT+KEILGT SVGC VDG+ P D+ +I+ G VE P++
Sbjct: 123 RELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECPAS 165
>sw|P30050|RL12_HUMAN 60S ribosomal protein L12.
Length = 165
Score = 233 bits (595), Expect = 2e-60
Identities = 111/163 (68%), Positives = 139/163 (85%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
K DP+++ V++R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKL
Sbjct: 4 KFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKL 62
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
T+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKHSGNI+ D+++ IAR MRHRS+A
Sbjct: 63 TIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLA 122
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 427
+EL+GT+KEILGT SVGC VDG+ P D+ +I+ G VE P++
Sbjct: 123 RELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECPAS 165
>sptrnew|EAA13967|EAA13967 AgCP8207 (Fragment).
Length = 174
Score = 233 bits (593), Expect = 4e-60
Identities = 114/162 (70%), Positives = 136/162 (83%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
K DP++V V++R GGEVGA SSLAPKIGPLGLSPKKIG+DIAK T DWKGL++TV L
Sbjct: 13 KFDPNEVKHVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATG-DWKGLKITVCL 71
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
T+QNRQA +SVVPSAA+L++KALKEP RDRKKVKNIKH+GNI+ D+VI IAR MR RSMA
Sbjct: 72 TIQNRQAAISVVPSAASLIVKALKEPPRDRKKVKNIKHNGNITFDEVINIARVMRPRSMA 131
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 430
+ELAGT KE+LGT SVGCT+DG+ P D+ +I G +EIPS
Sbjct: 132 RELAGTCKEVLGTAQSVGCTIDGRSPHDVIDDISSGAIEIPS 173
>sw|P23358|RL12_RAT 60S ribosomal protein L12.
Length = 165
Score = 232 bits (592), Expect = 5e-60
Identities = 110/163 (67%), Positives = 139/163 (85%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
K DP+++ V++R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKL
Sbjct: 4 KFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKL 62
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
T+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNI+ D+++ IAR MRHRS+A
Sbjct: 63 TIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHNGNITFDEIVNIARQMRHRSLA 122
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 427
+EL+GT+KEILGT SVGC VDG+ P D+ +I+ G VE P++
Sbjct: 123 RELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECPAS 165
>sptr|Q7ZUG1|Q7ZUG1 Similar to ribosomal protein L12.
Length = 165
Score = 232 bits (591), Expect = 7e-60
Identities = 111/162 (68%), Positives = 138/162 (85%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
K DP+++ VF+R TGGEVGA SSLAPKIGPLGLSPKK+G+DIAK T DWKG R+TVKL
Sbjct: 4 KFDPNEIKVVFMRCTGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATG-DWKGPRITVKL 62
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
T+QNRQA + VVPSA+AL+IKALKEP RDRKKVKNIKHSG+++ D+++ IAR MRHRS+A
Sbjct: 63 TIQNRQAAIEVVPSASALIIKALKEPPRDRKKVKNIKHSGSVAFDEIVNIARVMRHRSIA 122
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 430
+EL+GT+KEILGT SVGCT+DG+ P D+ +I+ G VE P+
Sbjct: 123 RELSGTIKEILGTAQSVGCTIDGRLPHDVIDDINSGAVECPT 164
>sptrnew|AAM68299|AAM68299 CG3195-PA (CG3195-PB).
Length = 165
Score = 229 bits (583), Expect = 6e-59
Identities = 112/162 (69%), Positives = 136/162 (83%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
K DP++V V++R GGEVGA SSLAPKIGPLGLSPKKIG+DIAK T+ DWKGL++TV L
Sbjct: 4 KFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATS-DWKGLKITVCL 62
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
T+QNRQA +SVVPSAA+L+IKALKEP RDRKK KNIKHSGNI +D++ IAR MR RSMA
Sbjct: 63 TIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPRSMA 122
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 430
+EL GT KE+LGT SVGCTVDGK P D+ E+++G +E+P+
Sbjct: 123 RELKGTCKEVLGTAQSVGCTVDGKHPHDVIDELNEGSIEVPA 164
>sptr|Q9W1B9|Q9W1B9 RE28824p.
Length = 165
Score = 229 bits (583), Expect = 6e-59
Identities = 112/162 (69%), Positives = 136/162 (83%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
K DP++V V++R GGEVGA SSLAPKIGPLGLSPKKIG+DIAK T+ DWKGL++TV L
Sbjct: 4 KFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATS-DWKGLKITVCL 62
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
T+QNRQA +SVVPSAA+L+IKALKEP RDRKK KNIKHSGNI +D++ IAR MR RSMA
Sbjct: 63 TIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPRSMA 122
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 430
+EL GT KE+LGT SVGCTVDGK P D+ E+++G +E+P+
Sbjct: 123 RELKGTCKEVLGTAQSVGCTVDGKHPHDVIDELNEGSIEVPA 164
>sptr|Q9NQ02|Q9NQ02 DJ999L4.1 (Novel protein similar to ribosomal
protein L12 (RPL12)).
Length = 165
Score = 228 bits (580), Expect = 1e-58
Identities = 108/163 (66%), Positives = 137/163 (84%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
K DP+++ V++R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK DWKGLR+TVKL
Sbjct: 4 KFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKAMG-DWKGLRITVKL 62
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
T+QNRQA++ VVPSA+A++IKALKEP RDRKK KNIKHSGNI+ D+++ IAR MRH+S+A
Sbjct: 63 TIQNRQAQIEVVPSASAMIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHQSLA 122
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 427
+EL+GT KEILGT SVGC VDG+ P D+ +I+ G VE P++
Sbjct: 123 RELSGTTKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECPAS 165
>sptr|Q8C2K0|Q8C2K0 Ribosomal protein L12.
Length = 164
Score = 227 bits (578), Expect = 2e-58
Identities = 110/162 (67%), Positives = 136/162 (83%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
K DP++V V++R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKL
Sbjct: 4 KFDPNEVKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKL 62
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
T+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKHSGNI+ D+++ IAR MRHRS+A
Sbjct: 63 TIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLA 122
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 430
+EL+GT+KEILGT SVGC VDG+ P D+ +I+ +PS
Sbjct: 123 RELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSWCSGVPS 164
>sptrnew|EAA32167|EAA32167 Hypothetical protein.
Length = 165
Score = 226 bits (576), Expect = 4e-58
Identities = 111/161 (68%), Positives = 136/161 (84%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
K DP++V + +R TGGEVGA+S+LAPKIGPLGLSPKK+GEDIAK T DWKGLRVTVKL
Sbjct: 4 KFDPNEVKVITLRATGGEVGASSALAPKIGPLGLSPKKVGEDIAKATG-DWKGLRVTVKL 62
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
T+QNRQA VSVVP+A+ALVI+ALKEP RDRKK KNIKH+ ++S D+++EIARTMR +S +
Sbjct: 63 TIQNRQAAVSVVPTASALVIRALKEPPRDRKKEKNIKHNKSVSFDEIVEIARTMRFKSFS 122
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIP 433
KEL GTV E+LGT SVGC VDGK PK +Q+ I GE+++P
Sbjct: 123 KELKGTVLEVLGTAFSVGCQVDGKSPKAVQEAIHAGEIDVP 163
>sw|Q9C285|RL12_NEUCR 60S ribosomal protein L12.
Length = 165
Score = 226 bits (576), Expect = 4e-58
Identities = 111/161 (68%), Positives = 136/161 (84%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
K DP++V + +R TGGEVGA+S+LAPKIGPLGLSPKK+GEDIAK T DWKGLRVTVKL
Sbjct: 4 KFDPNEVKVITLRATGGEVGASSALAPKIGPLGLSPKKVGEDIAKATG-DWKGLRVTVKL 62
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
T+QNRQA VSVVP+A+ALVI+ALKEP RDRKK KNIKH+ ++S D+++EIARTMR +S +
Sbjct: 63 TIQNRQAAVSVVPTASALVIRALKEPPRDRKKEKNIKHNKSVSFDEIVEIARTMRFKSFS 122
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIP 433
KEL GTV E+LGT SVGC VDGK PK +Q+ I GE+++P
Sbjct: 123 KELKGTVLEVLGTAFSVGCQVDGKSPKAVQEAIHAGEIDVP 163
>sw|O62290|RL12_CAEEL 60S ribosomal protein L12.
Length = 165
Score = 225 bits (573), Expect = 8e-58
Identities = 108/162 (66%), Positives = 138/162 (85%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
K DP+++ V++R GGEVGA S+LAPK+GPLGLSPKKIGEDIAK T +DWKGL+VT KL
Sbjct: 4 KFDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKAT-QDWKGLKVTCKL 62
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
T+QNR AK+ VVPSAA+L++K LKEP RDRKKVKN+KH+G++++D +I+IAR MR RSMA
Sbjct: 63 TIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNGDLTVDTIIKIARIMRPRSMA 122
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 430
K+L GTVKEILGT SVGCT+DG+ P D+ + I +GE+EIP+
Sbjct: 123 KKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIEIPA 164
>sptr|Q90YV6|Q90YV6 Ribosomal protein L12.
Length = 167
Score = 224 bits (571), Expect = 1e-57
Identities = 108/159 (67%), Positives = 135/159 (84%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
K DP+++ V++R TGGEVGA SSLAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKL
Sbjct: 4 KFDPNEIKIVYMRCTGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKL 62
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
T+QNRQA + VVPSA+AL+IKALKEP RDRKKVKNIKHSG++ D+++ IAR MR RS+A
Sbjct: 63 TIQNRQAAIEVVPSASALIIKALKEPPRDRKKVKNIKHSGSVPFDEIVNIARVMRPRSIA 122
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVE 439
+EL+GT+KEILGT SVGCT+DG+ P D+ +I+ G+ E
Sbjct: 123 RELSGTIKEILGTAQSVGCTIDGRLPHDVIDDINSGKQE 161
>sptr|Q9NFW1|Q9NFW1 L12 ribosomal protein.
Length = 165
Score = 223 bits (568), Expect = 3e-57
Identities = 107/163 (65%), Positives = 135/163 (82%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
K DP+ + V++RV GGEVGA SSLAPKIGPLGLSPKK+G+DIAK T +WKGL+VTVKL
Sbjct: 4 KFDPTAITIVYLRVIGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATG-EWKGLKVTVKL 62
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
+QNR A +SVVPSAA+L+IK LKEP RDRKKVK++KH+G+I+LD++ +IAR MR RS+A
Sbjct: 63 VIQNRNATISVVPSAASLIIKYLKEPPRDRKKVKHVKHNGDITLDNIFDIARQMRERSLA 122
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 427
++ +GTVKEILGT SVGCT+DGK P D+ + I GE+E P A
Sbjct: 123 RKFSGTVKEILGTAQSVGCTIDGKSPHDIIESIQSGEIECPEA 165
>sptr|Q95V38|Q95V38 Ribosomal protein L12.
Length = 164
Score = 221 bits (562), Expect = 2e-56
Identities = 111/160 (69%), Positives = 136/160 (85%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
K DP+++ V +R GGEVGA SSLAPKIGPLGLSPKK+G+DIAK T+ DWKGL++TV+L
Sbjct: 4 KFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKITVQL 62
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
VQNRQA++SVVPSAAAL+I+ALKEP RDRKK KNIKH+GNI+L+DVI IA+TMR RSMA
Sbjct: 63 IVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNITLEDVISIAKTMRARSMA 122
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEI 436
+ L+GTVKEILGT SVGCTV+G+ P DL +I+ G + I
Sbjct: 123 RYLSGTVKEILGTAQSVGCTVEGRPPHDLINDINSGALTI 162
>sptrnew|CAA16156|CAA16156 CICK0721Q.2 (60S Ribosomal Protein L12
LIKE protein).
Length = 165
Score = 219 bits (557), Expect = 6e-56
Identities = 104/163 (63%), Positives = 135/163 (82%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
K DP+++ V++R T GEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKL
Sbjct: 4 KFDPNEIKVVYLRCTRGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKL 62
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
T++NRQA++ VVPSA+A +IKALK+P RDRKK KNIKH+GNI+ D+++ IAR MRHRS+A
Sbjct: 63 TIENRQAQIEVVPSASAPIIKALKKPPRDRKKQKNIKHNGNITFDEIVNIARQMRHRSLA 122
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 427
+EL+GT+KEI GT S+GC VDG P D+ +I+ G VE P++
Sbjct: 123 RELSGTIKEIPGTAQSMGCNVDGHHPHDIIDDINSGAVECPAS 165
>sptr|O60886|O60886 60S ribosomal protein L12 like protein.
Length = 165
Score = 219 bits (557), Expect = 6e-56
Identities = 104/163 (63%), Positives = 135/163 (82%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
K DP+++ V++R T GEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKL
Sbjct: 4 KFDPNEIKVVYLRCTRGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKL 62
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
T++NRQA++ VVPSA+A +IKALK+P RDRKK KNIKH+GNI+ D+++ IAR MRHRS+A
Sbjct: 63 TIENRQAQIEVVPSASAPIIKALKKPPRDRKKQKNIKHNGNITFDEIVNIARQMRHRSLA 122
Query: 555 KELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 427
+EL+GT+KEI GT S+GC VDG P D+ +I+ G VE P++
Sbjct: 123 RELSGTIKEIPGTAQSMGCNVDGHHPHDIIDDINSGAVECPAS 165
>sptr|Q862L6|Q862L6 Similar to ribosomal protein L12 (Fragment).
Length = 145
Score = 218 bits (554), Expect = 1e-55
Identities = 104/143 (72%), Positives = 126/143 (88%)
Frame = -2
Query: 915 KLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 736
K DP+++ V++R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKL
Sbjct: 4 KFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKL 62
Query: 735 TVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARTMRHRSMA 556
T+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKHSGNI+ D+++ IAR MRHRS+A
Sbjct: 63 TIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLA 122
Query: 555 KELAGTVKEILGTCVSVGCTVDG 487
+EL+GT+KEILGT SVGC VDG
Sbjct: 123 RELSGTIKEILGTAQSVGCNVDG 145
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 538,660,296
Number of Sequences: 1272877
Number of extensions: 10191669
Number of successful extensions: 36304
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36211
length of database: 406,886,216
effective HSP length: 123
effective length of database: 250,322,345
effective search space used: 51065758380
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)