BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804904.2.3
(801 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptrnew|CAE02348|CAE02348 OSJNBb0072M01.9 protein. 221 1e-56
sptrnew|CAE01918|CAE01918 OSJNBb0070J16.14 protein. 221 1e-56
sptr|Q9SXL9|Q9SXL9 Csf-1 protein (Fragment). 218 6e-56
sw|P55844|RL14_PEA Probable 60 ribosomal protein L14 (Hydroxypro... 214 1e-54
sptr|Q9SIM4|Q9SIM4 Putative 60S ribosomal protein L14. 213 2e-54
sptr|Q9T043|Q9T043 Ribosomal protein L14-like protein (AT4G27090... 213 3e-54
sptr|Q98SE0|Q98SE0 Putative ribosomal protein L14. 123 2e-27
sptr|Q90YV3|Q90YV3 Ribosomal protein L14. 121 9e-27
sw|O46160|RL14_LUMRU 60S ribosomal protein L14. 121 1e-26
sptr|Q8ITA2|Q8ITA2 Ribosomal protein L14 (Fragment). 120 2e-26
sptrnew|AAP80695|AAP80695 Ribosome protein L14. 120 3e-26
sw|Q63507|RL14_RAT 60S ribosomal protein L14. 119 6e-26
sptr|Q811L0|Q811L0 Similar to RIKEN cDNA 3100001N19 gene. 119 6e-26
sptr|Q9CWK0|Q9CWK0 3100001N19Rik protein. 119 6e-26
sptr|Q9CR57|Q9CR57 3100001N19Rik protein. 119 6e-26
sptr|Q9D8Q1|Q9D8Q1 3100001N19Rik protein. 119 6e-26
sw|P50914|RL14_HUMAN 60S ribosomal protein L14 (CAG-ISL 7). 117 2e-25
sptr|Q98TF9|Q98TF9 Ribosomal protein L14 (Fragment). 112 6e-24
sptr|Q962T9|Q962T9 Ribosomal protein L14. 100 3e-20
sw|O94238|RL14_SCHPO 60S ribosomal protein L14. 98 1e-19
sptr|Q9XVE9|Q9XVE9 C04F12.4 protein. 95 1e-18
sw|P38754|R14B_YEAST 60S ribosomal protein L14-B. 94 2e-18
sptr|O04075|O04075 Root abundant protein. 63 3e-18
sw|P36105|R14A_YEAST 60S ribosomal protein L14-A. 94 3e-18
sw|P55841|RL14_DROME 60S ribosomal protein L14. 94 3e-18
sptrnew|EAA11356|EAA11356 AgCP6003. 92 1e-17
sptr|Q95ZE8|Q95ZE8 Ribosomal protein L14. 90 3e-17
sptrnew|EAA36538|EAA36538 Hypothetical protein. 82 8e-15
sptr|Q8ILE8|Q8ILE8 Ribosomal protein L14, putative. 79 7e-14
sptr|Q922F9|Q922F9 Similar to RIKEN cDNA 3100001N19 gene (Fragme... 70 3e-11
>sptrnew|CAE02348|CAE02348 OSJNBb0072M01.9 protein.
Length = 306
Score = 221 bits (562), Expect = 1e-56
Identities = 110/115 (95%), Positives = 114/115 (99%)
Frame = +2
Query: 98 PFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKID 277
PFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKID
Sbjct: 15 PFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKID 74
Query: 278 IKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIK 442
IKRVPKK+TLIKAMEEADVK KWENSSWGKKLIVQKRRA+L+DFDRFKVMLA+IK
Sbjct: 75 IKRVPKKTTLIKAMEEADVKNKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 129
>sptrnew|CAE01918|CAE01918 OSJNBb0070J16.14 protein.
Length = 306
Score = 221 bits (562), Expect = 1e-56
Identities = 110/115 (95%), Positives = 114/115 (99%)
Frame = +2
Query: 98 PFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKID 277
PFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKID
Sbjct: 15 PFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKID 74
Query: 278 IKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIK 442
IKRVPKK+TLIKAMEEADVK KWENSSWGKKLIVQKRRA+L+DFDRFKVMLA+IK
Sbjct: 75 IKRVPKKTTLIKAMEEADVKNKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 129
>sptr|Q9SXL9|Q9SXL9 Csf-1 protein (Fragment).
Length = 138
Score = 218 bits (556), Expect = 6e-56
Identities = 105/134 (78%), Positives = 124/134 (92%)
Frame = +2
Query: 86 AARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTD 265
A +MPFKR+VEIGR+AL+NYG+DYG+LVVIVDV+DQNRALVDAPDM R Q+NFKRLSLTD
Sbjct: 3 APKMPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTD 62
Query: 266 IKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKR 445
IKIDIKRVPKK LI+AM+ DV+ KWENSSWG+KLIV+KRRA+L+DFDRFK+MLA+IKR
Sbjct: 63 IKIDIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKR 122
Query: 446 GGAIRQELSKLKKA 487
G +RQEL+KLKKA
Sbjct: 123 AGLVRQELAKLKKA 136
>sw|P55844|RL14_PEA Probable 60 ribosomal protein L14
(Hydroxyproline-rich glycoprotein HRGP1).
Length = 133
Score = 214 bits (544), Expect = 1e-54
Identities = 105/132 (79%), Positives = 117/132 (88%)
Frame = +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPFKRFVEIGRVAL+NYGKDYGRLVVIVDV+DQ RALVDAPDM R INFKRLSLTD+KI
Sbjct: 1 MPFKRFVEIGRVALINYGKDYGRLVVIVDVIDQTRALVDAPDMERSPINFKRLSLTDLKI 60
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DIKRVPKK LIKA+E ADVK KW SSWG+KLIV+K RAAL+DFDRFK+MLA+IKR
Sbjct: 61 DIKRVPKKKDLIKALEAADVKNKWAKSSWGRKLIVKKTRAALNDFDRFKIMLAKIKRAAG 120
Query: 455 IRQELSKLKKAS 490
+RQEL+KLKK +
Sbjct: 121 VRQELAKLKKTA 132
>sptr|Q9SIM4|Q9SIM4 Putative 60S ribosomal protein L14.
Length = 134
Score = 213 bits (543), Expect = 2e-54
Identities = 107/134 (79%), Positives = 119/134 (88%)
Frame = +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
M FKRFVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI I
Sbjct: 1 MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 60
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRAAL+DFDRFK+MLA+IKR G
Sbjct: 61 DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 120
Query: 455 IRQELSKLKKASTA 496
+RQEL+KLK+ A
Sbjct: 121 VRQELAKLKREIAA 134
>sptr|Q9T043|Q9T043 Ribosomal protein L14-like protein
(AT4G27090/T24A18_40).
Length = 134
Score = 213 bits (541), Expect = 3e-54
Identities = 106/134 (79%), Positives = 120/134 (89%)
Frame = +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTDI I
Sbjct: 1 MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVI 60
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA L+DFDRFK+MLA+IK+ G
Sbjct: 61 DINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGV 120
Query: 455 IRQELSKLKKASTA 496
+RQEL+KLKK TA
Sbjct: 121 VRQELAKLKKEITA 134
>sptr|Q98SE0|Q98SE0 Putative ribosomal protein L14.
Length = 137
Score = 123 bits (309), Expect = 2e-27
Identities = 64/132 (48%), Positives = 89/132 (67%), Gaps = 2/132 (1%)
Frame = +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP--DMVRCQINFKRLSLTDI 268
M FKRFVEIGRVA +++G G+LV IVDV+DQNRALVD P D+ R + FK + LTD
Sbjct: 1 MVFKRFVEIGRVAYISFGPHAGKLVAIVDVIDQNRALVDGPCTDVRRQAMPFKCMQLTDY 60
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
I + ++ + +A E+A+V KW SSW KK+ +++RA +SDFDR+K M A+ R
Sbjct: 61 VIKVPHSARQKYVRRAWEKAEVNQKWAQSSWAKKIEARQKRAKMSDFDRYKAMKAKRMRN 120
Query: 449 GAIRQELSKLKK 484
I+ E+ KL+K
Sbjct: 121 KIIKHEVKKLQK 132
>sptr|Q90YV3|Q90YV3 Ribosomal protein L14.
Length = 141
Score = 121 bits (304), Expect = 9e-27
Identities = 65/136 (47%), Positives = 88/136 (64%), Gaps = 2/136 (1%)
Frame = +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP--DMVRCQINFKRLSLTDI 268
M FKRFVEIGRVA V +G G+LV IVDV+DQNRALVD P + R + FK + LTD
Sbjct: 1 MVFKRFVEIGRVAYVAFGPHEGKLVTIVDVIDQNRALVDGPCTGVKRQSMPFKCMQLTDY 60
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
I + ++ + +A E+A + W SSW KK+ +K+RA ++DFDR+KVM A+ R
Sbjct: 61 VIKVPHSARQKFVRRAWEKAAISQNWAESSWAKKIEARKKRAKMTDFDRYKVMKAKKMRN 120
Query: 449 GAIRQELSKLKKASTA 496
I+ E KL+KA+ A
Sbjct: 121 KIIKHEAKKLQKAAAA 136
>sw|O46160|RL14_LUMRU 60S ribosomal protein L14.
Length = 152
Score = 121 bits (303), Expect = 1e-26
Identities = 64/133 (48%), Positives = 85/133 (63%), Gaps = 2/133 (1%)
Frame = +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP--DMVRCQINFKRLSLTDI 268
M F+RFVEIGRVA YG D G+LV IVDV+DQNRALVD P + R +NFK L LT++
Sbjct: 1 MSFRRFVEIGRVARAVYGPDQGKLVAIVDVIDQNRALVDGPCTHVARKSMNFKELELTNL 60
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
K K + KA E+ ++ KWE S KK+ +++R L+DF+RFK+M A+ R
Sbjct: 61 KAKFPHSAKTGVVKKAWEKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARN 120
Query: 449 GAIRQELSKLKKA 487
I+ E KL+KA
Sbjct: 121 RLIKIEFGKLRKA 133
>sptr|Q8ITA2|Q8ITA2 Ribosomal protein L14 (Fragment).
Length = 160
Score = 120 bits (302), Expect = 2e-26
Identities = 64/127 (50%), Positives = 84/127 (66%), Gaps = 2/127 (1%)
Frame = +2
Query: 110 FVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP--DMVRCQINFKRLSLTDIKIDIK 283
FVEIGRVAL YG D G+L VIVDV+DQNRALVD P + R Q+N+K L LT K++I
Sbjct: 17 FVEIGRVALFAYGPDKGKLCVIVDVIDQNRALVDGPATGVKRKQVNYKSLHLTQFKLNIG 76
Query: 284 RVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGAIRQ 463
R + L+K + +++KW+ +SW KK+ + R +LSDFDRFK+M A+ R I
Sbjct: 77 RAMRTGNLLKVWNKESMQSKWDATSWAKKIANKSLRKSLSDFDRFKLMKAKQARNRLIAI 136
Query: 464 ELSKLKK 484
E KLKK
Sbjct: 137 ECGKLKK 143
>sptrnew|AAP80695|AAP80695 Ribosome protein L14.
Length = 133
Score = 120 bits (300), Expect = 3e-26
Identities = 69/132 (52%), Positives = 89/132 (67%), Gaps = 3/132 (2%)
Frame = +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPD--MVRCQINFKRLSLTDI 268
M F RFVE GRVALV+YG+ +LVVIVD++DQNR LVD+P + R IN KR++LT I
Sbjct: 1 MTFTRFVEAGRVALVSYGEHLNKLVVIVDILDQNRILVDSPSHGLKRKVINVKRIALTSI 60
Query: 269 KI-DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKR 445
K+ DI R + + A V + S WGKKL +++RAAL DF RFKVM+AR+K+
Sbjct: 61 KVDDIARGAPVAEVKSKYTAAKVDETFAASGWGKKLAKREKRAALDDFGRFKVMVARMKK 120
Query: 446 GGAIRQELSKLK 481
AI EL+KLK
Sbjct: 121 SKAINAELAKLK 132
>sw|Q63507|RL14_RAT 60S ribosomal protein L14.
Length = 213
Score = 119 bits (297), Expect = 6e-26
Identities = 62/132 (46%), Positives = 90/132 (68%), Gaps = 2/132 (1%)
Frame = +2
Query: 101 FKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP-DMVRCQ-INFKRLSLTDIKI 274
F+RFVE+GRVA +++G G+LV IVDV+DQNRALVD P VR Q + FK + LTD +
Sbjct: 2 FRRFVEVGRVAYISFGPHAGKLVAIVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDFIL 61
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
++ + KA E+AD+ TKW + W KK+ ++R+A ++DFDRFKVM A+ R
Sbjct: 62 KFPHSARQKYVRKAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRNRI 121
Query: 455 IRQELSKLKKAS 490
I+ E+ KL++A+
Sbjct: 122 IKTEVKKLQRAA 133
>sptr|Q811L0|Q811L0 Similar to RIKEN cDNA 3100001N19 gene.
Length = 159
Score = 119 bits (297), Expect = 6e-26
Identities = 62/134 (46%), Positives = 91/134 (67%), Gaps = 2/134 (1%)
Frame = +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP-DMVRCQ-INFKRLSLTDI 268
M F+R+VE+GRVA +++G G+LV IVDV+DQNRALVD P VR Q + FK + LTD
Sbjct: 1 MVFRRYVEVGRVAYISFGPHAGKLVAIVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDF 60
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
+ ++ + KA E+AD+ TKW + W KK+ ++R+A ++DFDRFKVM A+ R
Sbjct: 61 ILKFPHSARQKYVRKAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRN 120
Query: 449 GAIRQELSKLKKAS 490
I+ E+ KL++A+
Sbjct: 121 RIIKTEVKKLQRAA 134
>sptr|Q9CWK0|Q9CWK0 3100001N19Rik protein.
Length = 227
Score = 119 bits (297), Expect = 6e-26
Identities = 62/134 (46%), Positives = 91/134 (67%), Gaps = 2/134 (1%)
Frame = +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP-DMVRCQ-INFKRLSLTDI 268
M F+R+VE+GRVA +++G G+LV IVDV+DQNRALVD P VR Q + FK + LTD
Sbjct: 1 MVFRRYVEVGRVAYISFGPHAGKLVAIVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDF 60
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
+ ++ + KA E+AD+ TKW + W KK+ ++R+A ++DFDRFKVM A+ R
Sbjct: 61 ILKFPHSARQKYVRKAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRN 120
Query: 449 GAIRQELSKLKKAS 490
I+ E+ KL++A+
Sbjct: 121 RIIKTEVKKLQRAA 134
>sptr|Q9CR57|Q9CR57 3100001N19Rik protein.
Length = 217
Score = 119 bits (297), Expect = 6e-26
Identities = 62/134 (46%), Positives = 91/134 (67%), Gaps = 2/134 (1%)
Frame = +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP-DMVRCQ-INFKRLSLTDI 268
M F+R+VE+GRVA +++G G+LV IVDV+DQNRALVD P VR Q + FK + LTD
Sbjct: 1 MVFRRYVEVGRVAYISFGPHAGKLVAIVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDF 60
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
+ ++ + KA E+AD+ TKW + W KK+ ++R+A ++DFDRFKVM A+ R
Sbjct: 61 ILKFPHSARQKYVRKAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRN 120
Query: 449 GAIRQELSKLKKAS 490
I+ E+ KL++A+
Sbjct: 121 RIIKTEVKKLQRAA 134
>sptr|Q9D8Q1|Q9D8Q1 3100001N19Rik protein.
Length = 217
Score = 119 bits (297), Expect = 6e-26
Identities = 62/134 (46%), Positives = 91/134 (67%), Gaps = 2/134 (1%)
Frame = +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP-DMVRCQ-INFKRLSLTDI 268
M F+R+VE+GRVA +++G G+LV IVDV+DQNRALVD P VR Q + FK + LTD
Sbjct: 1 MVFRRYVEVGRVAYISFGPHAGKLVTIVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDF 60
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
+ ++ + KA E+AD+ TKW + W KK+ ++R+A ++DFDRFKVM A+ R
Sbjct: 61 ILKFPHSARQKYVRKAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRN 120
Query: 449 GAIRQELSKLKKAS 490
I+ E+ KL++A+
Sbjct: 121 RIIKTEVKKLQRAA 134
>sw|P50914|RL14_HUMAN 60S ribosomal protein L14 (CAG-ISL 7).
Length = 212
Score = 117 bits (293), Expect = 2e-25
Identities = 60/132 (45%), Positives = 88/132 (66%), Gaps = 2/132 (1%)
Frame = +2
Query: 101 FKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP--DMVRCQINFKRLSLTDIKI 274
F+RFVE+GRVA V++G G+LV IVDV+DQNRALVD P + R + FK + LTD +
Sbjct: 2 FRRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDFIL 61
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
+ + +A ++AD+ TKW + W KK+ ++R+A ++DFDRFKVM A+ R
Sbjct: 62 KFPHSAHQKYVRQAWQKADINTKWAATRWAKKIEARERKAKMTDFDRFKVMKAKKMRNRI 121
Query: 455 IRQELSKLKKAS 490
I+ E+ KL+KA+
Sbjct: 122 IKNEVKKLQKAA 133
>sptr|Q98TF9|Q98TF9 Ribosomal protein L14 (Fragment).
Length = 131
Score = 112 bits (280), Expect = 6e-24
Identities = 56/131 (42%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
Frame = +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP--DMVRCQINFKRLSLTDI 268
M FKRFVEIGR+A V++G+ G+LV IVDV+DQNRALVD P + R + FK + LTD
Sbjct: 1 MVFKRFVEIGRIAFVSFGRHAGKLVAIVDVIDQNRALVDGPCSGVRRQAMPFKCMQLTDF 60
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
+ ++ + +A E+ ++ KW + W KK+ ++++A ++DFDR+KVM A+ R
Sbjct: 61 VLKFPHSARQKCVRRAWEKENINEKWAATRWAKKIEAREKKAKMTDFDRYKVMKAKKMRN 120
Query: 449 GAIRQELSKLK 481
I+ E+ KL+
Sbjct: 121 RIIKHEIKKLQ 131
>sptr|Q962T9|Q962T9 Ribosomal protein L14.
Length = 166
Score = 100 bits (248), Expect = 3e-20
Identities = 60/137 (43%), Positives = 80/137 (58%), Gaps = 3/137 (2%)
Frame = +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP--DMVRCQINFKRLSLTDI 268
MPF RFVE GRVALV G G+LV +VDV+DQ RALVD P + R QI +L LT
Sbjct: 1 MPFARFVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPCSGVSRQQIRLNQLHLTKF 60
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
+++ + KA +A + KW S W +L +++RA ++DFDRFK+ AR+KR
Sbjct: 61 RLNYPFTAPTRIVRKAWTDAKLSEKWTESQWATRLANKEKRAQMTDFDRFKLTSARVKRN 120
Query: 449 GAIRQELSKLK-KASTA 496
A LK KA+ A
Sbjct: 121 RARTAVFKSLKVKAARA 137
>sw|O94238|RL14_SCHPO 60S ribosomal protein L14.
Length = 134
Score = 97.8 bits (242), Expect = 1e-19
Identities = 54/131 (41%), Positives = 79/131 (60%), Gaps = 2/131 (1%)
Frame = +2
Query: 101 FKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP--DMVRCQINFKRLSLTDIKI 274
FKR+VE+GRV LV G+ G+L VIVD+VD RAL+D+P + R I + + LT I +
Sbjct: 4 FKRYVEVGRVVLVTKGEYTGKLAVIVDIVDHKRALIDSPCSEFPRQVIRYGSVVLTHIVM 63
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
+ R + + K + DV KW +S+W KKL +K R+ L+DFDRF VM + +R
Sbjct: 64 KLPRGARSGIVAKKWKAQDVCNKWASSAWAKKLEAKKVRSQLNDFDRFAVMRLKKQRREQ 123
Query: 455 IRQELSKLKKA 487
+ ++K KA
Sbjct: 124 VNVAVAKALKA 134
>sptr|Q9XVE9|Q9XVE9 C04F12.4 protein.
Length = 135
Score = 94.7 bits (234), Expect = 1e-18
Identities = 52/133 (39%), Positives = 77/133 (57%), Gaps = 2/133 (1%)
Frame = +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP--DMVRCQINFKRLSLTDI 268
M F R V+IGRV + GKD G+L IV+V+D NR +D P D+ R N K L LT
Sbjct: 1 MVFNRVVQIGRVVFIASGKDQGKLAAIVNVIDGNRVQIDGPSSDVTRTVRNLKDLQLTKF 60
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
+ ++ + + A + A V ++ + W KK+ + RA L+DF+R+K+M A+ R
Sbjct: 61 VLKLRVGQRTKGVKAAFDAAKVTENFQKTQWAKKIAQRAIRAKLTDFERYKLMKAKQMRN 120
Query: 449 GAIRQELSKLKKA 487
+R EL+KLKKA
Sbjct: 121 RIVRVELAKLKKA 133
>sw|P38754|R14B_YEAST 60S ribosomal protein L14-B.
Length = 138
Score = 94.0 bits (232), Expect = 2e-18
Identities = 48/125 (38%), Positives = 78/125 (62%), Gaps = 2/125 (1%)
Frame = +2
Query: 107 RFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPD--MVRCQINFKRLSLTDIKIDI 280
R VE+GRV L+ G+ G+L IV+++DQ + L+D P + R IN ++ LT + +
Sbjct: 13 RLVEVGRVVLIKKGQSAGKLAAIVEIIDQKKVLIDGPKAGVPRQAINLGQVVLTPLTFAL 72
Query: 281 KRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGAIR 460
R + +T+ K A V KW SSW KK+ ++RRAAL+DF+RF+VM+ R ++ ++
Sbjct: 73 PRGARTATVSKKWAAAGVCEKWAASSWAKKIAQRERRAALTDFERFQVMVLRKQKRYTVK 132
Query: 461 QELSK 475
+ L+K
Sbjct: 133 KALAK 137
>sptr|O04075|O04075 Root abundant protein.
Length = 99
Score = 62.8 bits (151), Expect(2) = 3e-18
Identities = 33/50 (66%), Positives = 35/50 (70%)
Frame = -1
Query: 426 MTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALIKVDFLGTRLM 277
MT LFWT SFLPHELFSHLVFTSASS+ALIKV FL RL+
Sbjct: 1 MTLNLSKSFSDALLFWTTSFLPHELFSHLVFTSASSMALIKVAFLRIRLI 50
Score = 51.6 bits (122), Expect(2) = 3e-18
Identities = 22/33 (66%), Positives = 28/33 (84%)
Frame = -3
Query: 277 VNLDVGK*EPFEVNLAPDHIRGVHKCPVLVDHI 179
VNLDVG+ + EV+LAPDHI +HKCPVLVD++
Sbjct: 51 VNLDVGQRKTLEVHLAPDHIGSIHKCPVLVDNV 83
>sw|P36105|R14A_YEAST 60S ribosomal protein L14-A.
Length = 138
Score = 93.6 bits (231), Expect = 3e-18
Identities = 48/125 (38%), Positives = 78/125 (62%), Gaps = 2/125 (1%)
Frame = +2
Query: 107 RFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPD--MVRCQINFKRLSLTDIKIDI 280
R VE+GRV L+ G+ G+L IV+++DQ + L+D P + R IN ++ LT + +
Sbjct: 13 RLVEVGRVVLIKKGQSAGKLAAIVEIIDQKKVLIDGPKAGVPRQAINLGQVVLTPLTFAL 72
Query: 281 KRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGAIR 460
R + +T+ K A V KW SSW KK+ ++RRAAL+DF+RF+VM+ R ++ ++
Sbjct: 73 PRGARTATVSKKWAAAAVCEKWAASSWAKKIAQRERRAALTDFERFQVMVLRKQKRYTVK 132
Query: 461 QELSK 475
+ L+K
Sbjct: 133 KALAK 137
>sw|P55841|RL14_DROME 60S ribosomal protein L14.
Length = 166
Score = 93.6 bits (231), Expect = 3e-18
Identities = 54/136 (39%), Positives = 77/136 (56%), Gaps = 2/136 (1%)
Frame = +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP--DMVRCQINFKRLSLTDI 268
MPF+RFV+ GR+A + G GRLV IVDV+DQNR LVD P + R + L LT
Sbjct: 1 MPFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKY 60
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
+I + KA E+D+K +W+ S W K +R++L+DFDRFK+ A+ +R
Sbjct: 61 RIKFPYTAPTRIVRKAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRN 120
Query: 449 GAIRQELSKLKKASTA 496
+ + LKK + A
Sbjct: 121 KLLTIAFNTLKKRTKA 136
>sptrnew|EAA11356|EAA11356 AgCP6003.
Length = 205
Score = 91.7 bits (226), Expect = 1e-17
Identities = 48/127 (37%), Positives = 75/127 (59%), Gaps = 2/127 (1%)
Frame = +2
Query: 110 FVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPD--MVRCQINFKRLSLTDIKIDIK 283
FVE GRVA GK GRLV IV+V+DQNR L+D P + R Q L LT ++
Sbjct: 26 FVETGRVAKCAVGKYKGRLVAIVNVIDQNRVLIDGPTSGVPRQQYAVNHLHLTKFRVRFP 85
Query: 284 RVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGAIRQ 463
+ + A+E+ D++ K+E + W ++ + + +R +++DFDRFK+ LAR +R +
Sbjct: 86 HTARTRLVRDALEKFDIRKKFEETRWYERSVAKAKRFSMNDFDRFKLRLARRERNAIVSA 145
Query: 464 ELSKLKK 484
+ K+KK
Sbjct: 146 QYKKMKK 152
>sptr|Q95ZE8|Q95ZE8 Ribosomal protein L14.
Length = 160
Score = 90.1 bits (222), Expect = 3e-17
Identities = 52/132 (39%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Frame = +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP--DMVRCQINFKRLSLTDI 268
MPF+RFV+ GR+A + G GRLV IVDV+DQNR LVD P + R + L LT
Sbjct: 1 MPFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKY 60
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
+I + KA ++D+K +W+ S W K +R+ L+DFDRFK+ A+ +R
Sbjct: 61 RIKFPYTAPTRIVRKAWVDSDLKAQWKVSPWSVKAQNICKRSQLNDFDRFKLRYAKRQRN 120
Query: 449 GAIRQELSKLKK 484
+ + LKK
Sbjct: 121 KLLTIAFNTLKK 132
>sptrnew|EAA36538|EAA36538 Hypothetical protein.
Length = 142
Score = 82.0 bits (201), Expect = 8e-15
Identities = 50/135 (37%), Positives = 76/135 (56%), Gaps = 7/135 (5%)
Frame = +2
Query: 107 RFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM------VRCQINFKRLSLTDI 268
R VE+GRV + + G L IV++VD R LVD P R ++ R LT +
Sbjct: 12 RLVEVGRVLKL----EGGSLATIVEIVDHKRVLVDGPSSDPKLAAPRGVVSLSRTLLTPL 67
Query: 269 KID-IKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKR 445
++ + R + + KA E A + KW+ S+W KK + Q+RR AL+DFDRFKVM + +R
Sbjct: 68 VVEKLPRGARTGAVKKAWEAAGIDAKWKESNWAKKQLQQERRKALTDFDRFKVMRLKKQR 127
Query: 446 GGAIRQELSKLKKAS 490
R+ L+K+K ++
Sbjct: 128 RFEERKALAKIKASA 142
>sptr|Q8ILE8|Q8ILE8 Ribosomal protein L14, putative.
Length = 165
Score = 79.0 bits (193), Expect = 7e-14
Identities = 46/115 (40%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Frame = +2
Query: 101 FKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMV---RCQINFKRLSLTDIK 271
FKRFVE GR+ L+ YG G+L IVD+V R +VD + R I KRL L +
Sbjct: 21 FKRFVEPGRLCLIEYGPYAGKLCFIVDIVTITRVIVDGAFITGVPRMVIPLKRLKLLKER 80
Query: 272 IDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLAR 436
I I + K L K + V ++ NS GKK+I++K+R +DF+RF+V A+
Sbjct: 81 IKINKNCKSGFLRKTVNSTKVLEEFNNSKLGKKMIIKKKRDEATDFERFQVYFAK 135
>sptr|Q922F9|Q922F9 Similar to RIKEN cDNA 3100001N19 gene
(Fragment).
Length = 173
Score = 70.5 bits (171), Expect = 3e-11
Identities = 33/83 (39%), Positives = 53/83 (63%)
Frame = +2
Query: 242 FKRLSLTDIKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFK 421
FK + LTD + ++ + KA E+AD+ TKW + W KK+ ++R+A ++DFDRFK
Sbjct: 9 FKCMQLTDFILKFPHSARQKYVRKAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFK 68
Query: 422 VMLARIKRGGAIRQELSKLKKAS 490
VM A+ R I+ E+ KL++A+
Sbjct: 69 VMKAKKMRNRIIKTEVKKLQRAA 91
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 552,590,534
Number of Sequences: 1272877
Number of extensions: 10841538
Number of successful extensions: 24007
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23970
length of database: 406,886,216
effective HSP length: 120
effective length of database: 254,140,976
effective search space used: 37104582496
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)