BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131543.2.1
(634 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptr|Q9FP55|Q9FP55 P0475H04.11 protein. 109 3e-23
sptr|Q9M7X5|Q9M7X5 Ribosomal protein L29, putative (Ribosomal pr... 97 1e-19
sptr|Q9MAW5|Q9MAW5 Ribosomal protein L29. 97 2e-19
sptr|Q9M7X7|Q9M7X7 Ribosomal protein L29, putative. 96 3e-19
sptr|Q9FR31|Q9FR31 Ripening regulated protein DDTFR19. 95 6e-19
sptr|Q84WM0|Q84WM0 At3g06680. 94 1e-18
sptrnew|EAA10983|EAA10983 AgCP5781 (Fragment). 83 3e-15
sptr|Q90YT8|Q90YT8 Ribosomal protein L29. 82 4e-15
sptr|Q95V37|Q95V37 Ribosomal protein L29. 81 1e-14
sptrnew|AAH02062|AAH02062 Ribosomal protein L29. 80 2e-14
sptrnew|BAC40419|BAC40419 2 days neonate thymus thymic cells cDN... 80 2e-14
sptrnew|BAB28782|BAB28782 10, 11 days embryo whole body cDNA, RI... 80 2e-14
sptrnew|AAF69833|AAF69833 Ribosomal protein L29. 80 2e-14
sptr|Q9XS36|Q9XS36 Ribosomal protein L29/heparin/heparan sulfate... 80 2e-14
sptr|Q8HXB8|Q8HXB8 Ribosomal protein L29. 80 2e-14
sptrnew|AAH53776|AAH53776 Hypothetical protein. 79 5e-14
sw|P47914|RL29_HUMAN 60S ribosomal protein L29 (Cell surface hep... 79 6e-14
sw|P47915|RL29_MOUSE 60S ribosomal protein L29. 79 6e-14
sw|P25886|RL29_RAT 60S ribosomal protein L29 (P23). 79 6e-14
sptr|O45226|O45226 B0513.3 protein. 78 8e-14
sw|Q95281|RL29_PIG 60S ribosomal protein L29 (Fragment). 77 2e-13
sw|Q24154|RL29_DROME 60S ribosomal protein L29 (L43). 76 4e-13
sw|P05747|RL29_YEAST 60S ribosomal protein L29 (YL43). 72 7e-12
sptr|Q9XST9|Q9XST9 Ribosomal protein (Fragment). 69 6e-11
sptrnew|EAA28550|EAA28550 Hypothetical protein. 68 8e-11
sptrnew|EAA37042|EAA37042 GLP_433_2266_2454. 67 2e-10
sptr|Q8SXW1|Q8SXW1 RH58777p. 65 5e-10
sw|Q92366|RL29_SCHPO 60S ribosomal protein L29 (L43). 65 9e-10
sptr|Q9NAG9|Q9NAG9 Y47H9C.14 protein. 59 4e-08
sptr|Q9Y083|Q9Y083 60S ribosomal protein L29 (Fragment). 52 5e-06
>sptr|Q9FP55|Q9FP55 P0475H04.11 protein.
Length = 60
Score = 109 bits (272), Expect = 3e-23
Identities = 51/54 (94%), Positives = 52/54 (96%)
Frame = +3
Query: 129 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
MAKSKNHTAHNQS+KAHKNGIKKPKRHRQTSTKGMDPKFLRN RYSRK NKKSG
Sbjct: 1 MAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNQRYSRKHNKKSG 54
>sptr|Q9M7X5|Q9M7X5 Ribosomal protein L29, putative (Ribosomal
protein L29, putative, 6298-6620).
Length = 61
Score = 97.4 bits (241), Expect = 1e-19
Identities = 45/54 (83%), Positives = 48/54 (88%)
Frame = +3
Query: 129 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
MAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+RK N KSG
Sbjct: 1 MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKSG 54
>sptr|Q9MAW5|Q9MAW5 Ribosomal protein L29.
Length = 61
Score = 97.1 bits (240), Expect = 2e-19
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +3
Query: 129 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
MAKSKNHTAHNQS KAH+NGIKKP++HR TST+GMDPKFLRN RY+RK N K+G
Sbjct: 1 MAKSKNHTAHNQSHKAHRNGIKKPRKHRHTSTRGMDPKFLRNQRYARKHNNKTG 54
>sptr|Q9M7X7|Q9M7X7 Ribosomal protein L29, putative.
Length = 61
Score = 96.3 bits (238), Expect = 3e-19
Identities = 44/54 (81%), Positives = 48/54 (88%)
Frame = +3
Query: 129 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
MAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+RK N K+G
Sbjct: 1 MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAG 54
>sptr|Q9FR31|Q9FR31 Ripening regulated protein DDTFR19.
Length = 54
Score = 95.1 bits (235), Expect = 6e-19
Identities = 42/52 (80%), Positives = 48/52 (92%)
Frame = +3
Query: 129 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKK 284
MAKSKNHTAHNQS+KAH+NGIKKP++HR +STKGMDPKFLRN RY+RK N K
Sbjct: 1 MAKSKNHTAHNQSYKAHRNGIKKPRKHRHSSTKGMDPKFLRNQRYARKHNPK 52
>sptr|Q84WM0|Q84WM0 At3g06680.
Length = 61
Score = 94.4 bits (233), Expect = 1e-18
Identities = 44/54 (81%), Positives = 47/54 (87%)
Frame = +3
Query: 129 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
MAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+ K N KSG
Sbjct: 1 MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAVKHNVKSG 54
>sptrnew|EAA10983|EAA10983 AgCP5781 (Fragment).
Length = 107
Score = 82.8 bits (203), Expect = 3e-15
Identities = 39/51 (76%), Positives = 43/51 (84%)
Frame = +3
Query: 126 EMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGN 278
+MAKSKNHT HNQ+ KAHKNGIKKPKR R S +GM KFLRNLRYS+KGN
Sbjct: 31 KMAKSKNHTNHNQNQKAHKNGIKKPKRKRNESKRGMCQKFLRNLRYSKKGN 81
>sptr|Q90YT8|Q90YT8 Ribosomal protein L29.
Length = 64
Score = 82.4 bits (202), Expect = 4e-15
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +3
Query: 129 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKK 284
MAKSKNHT HNQS K H+NGIKKP+ HR S KG+DPKFLRN+R+++K NK+
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSHRYESLKGVDPKFLRNMRFAKKHNKR 52
>sptr|Q95V37|Q95V37 Ribosomal protein L29.
Length = 73
Score = 80.9 bits (198), Expect = 1e-14
Identities = 37/52 (71%), Positives = 42/52 (80%)
Frame = +3
Query: 129 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKK 284
MAKSKNHT HNQ+ KAH+NGIKKP + R ST GMDPKFLRN R+ +KGN K
Sbjct: 1 MAKSKNHTNHNQNRKAHRNGIKKPTKQRHESTLGMDPKFLRNQRFCKKGNLK 52
>sptrnew|AAH02062|AAH02062 Ribosomal protein L29.
Length = 160
Score = 80.5 bits (197), Expect = 2e-14
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = +3
Query: 129 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKK 284
MAKSKNHT HNQS K H+NGIKKP+ R S KG+DPKFLRN+R+++K NKK
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52
>sptrnew|BAC40419|BAC40419 2 days neonate thymus thymic cells cDNA,
RIKEN full-length enriched library, clone:E430020A21
product:ribosomal protein L29, full insert sequence.
Length = 160
Score = 80.5 bits (197), Expect = 2e-14
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = +3
Query: 129 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKK 284
MAKSKNHT HNQS K H+NGIKKP+ R S KG+DPKFLRN+R+++K NKK
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52
>sptrnew|BAB28782|BAB28782 10, 11 days embryo whole body cDNA, RIKEN
full-length enriched library, clone:2810449A21
product:ribosomal protein L29, full insert sequence.
Length = 160
Score = 80.5 bits (197), Expect = 2e-14
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = +3
Query: 129 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKK 284
MAKSKNHT HNQS K H+NGIKKP+ R S KG+DPKFLRN+R+++K NKK
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52
>sptrnew|AAF69833|AAF69833 Ribosomal protein L29.
Length = 160
Score = 80.5 bits (197), Expect = 2e-14
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = +3
Query: 129 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKK 284
MAKSKNHT HNQS K H+NGIKKP+ R S KG+DPKFLRN+R+++K NKK
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52
>sptr|Q9XS36|Q9XS36 Ribosomal protein L29/heparin/heparan sulfate
interacting protein.
Length = 160
Score = 80.5 bits (197), Expect = 2e-14
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = +3
Query: 129 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKK 284
MAKSKNHT HNQS K H+NGIKKP+ R S KG+DPKFLRN+R+++K NKK
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52
>sptr|Q8HXB8|Q8HXB8 Ribosomal protein L29.
Length = 157
Score = 80.5 bits (197), Expect = 2e-14
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = +3
Query: 129 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKK 284
MAKSKNHT HNQS K H+NGIKKP+ R S KG+DPKFLRN+R+++K NKK
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52
>sptrnew|AAH53776|AAH53776 Hypothetical protein.
Length = 75
Score = 79.0 bits (193), Expect = 5e-14
Identities = 36/52 (69%), Positives = 42/52 (80%)
Frame = +3
Query: 129 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKK 284
MAKSKNHT HNQS K H+NGIKKP R S KG+DPKFLRN+R+++K NKK
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPVSQRYESLKGVDPKFLRNMRFAKKHNKK 52
>sw|P47914|RL29_HUMAN 60S ribosomal protein L29 (Cell surface
heparin binding protein HIP).
Length = 158
Score = 78.6 bits (192), Expect = 6e-14
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = +3
Query: 132 AKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKK 284
AKSKNHT HNQS K H+NGIKKP+ R S KG+DPKFLRN+R+++K NKK
Sbjct: 1 AKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 51
>sw|P47915|RL29_MOUSE 60S ribosomal protein L29.
Length = 159
Score = 78.6 bits (192), Expect = 6e-14
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = +3
Query: 132 AKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKK 284
AKSKNHT HNQS K H+NGIKKP+ R S KG+DPKFLRN+R+++K NKK
Sbjct: 1 AKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 51
>sw|P25886|RL29_RAT 60S ribosomal protein L29 (P23).
Length = 155
Score = 78.6 bits (192), Expect = 6e-14
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = +3
Query: 132 AKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKK 284
AKSKNHT HNQS K H+NGIKKP+ R S KG+DPKFLRN+R+++K NKK
Sbjct: 1 AKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 51
>sptr|O45226|O45226 B0513.3 protein.
Length = 62
Score = 78.2 bits (191), Expect = 8e-14
Identities = 35/52 (67%), Positives = 43/52 (82%)
Frame = +3
Query: 129 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKK 284
MAKSKNHT HNQ+ KAH+NGI KPK+H S KG+D KF++NLR+SRK NK+
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGITKPKKHIFLSMKGVDAKFIKNLRFSRKNNKR 52
>sw|Q95281|RL29_PIG 60S ribosomal protein L29 (Fragment).
Length = 92
Score = 77.0 bits (188), Expect = 2e-13
Identities = 34/50 (68%), Positives = 41/50 (82%)
Frame = +3
Query: 135 KSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKK 284
KSKNHT HNQS K H+NGIKKP+ R S KG+DPKFLRN+R+++K NKK
Sbjct: 2 KSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 51
>sw|Q24154|RL29_DROME 60S ribosomal protein L29 (L43).
Length = 76
Score = 75.9 bits (185), Expect = 4e-13
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +3
Query: 129 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGN 278
MAKSKNHT HNQ+ KAH+NGIK+P R R ST GMD KFL N RY+RKGN
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKGN 50
>sw|P05747|RL29_YEAST 60S ribosomal protein L29 (YL43).
Length = 58
Score = 71.6 bits (174), Expect = 7e-12
Identities = 32/52 (61%), Positives = 41/52 (78%)
Frame = +3
Query: 132 AKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKS 287
AKSKNHTAHNQ+ KAH+NGIKKPK ++ S KG+DPKF RN +++ G K+
Sbjct: 1 AKSKNHTAHNQTRKAHRNGIKKPKTYKYPSLKGVDPKFRRNHKHALHGTAKA 52
>sptr|Q9XST9|Q9XST9 Ribosomal protein (Fragment).
Length = 123
Score = 68.6 bits (166), Expect = 6e-11
Identities = 31/52 (59%), Positives = 37/52 (71%)
Frame = +3
Query: 129 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKK 284
M KS NHT HN S K H+NGI KP+ R S KG+ PKFLRN R+++K NKK
Sbjct: 1 MXKSXNHTTHNHSRKWHRNGIXKPRSQRYESLKGVXPKFLRNXRFAKKHNKK 52
>sptrnew|EAA28550|EAA28550 Hypothetical protein.
Length = 65
Score = 68.2 bits (165), Expect = 8e-11
Identities = 33/53 (62%), Positives = 38/53 (71%)
Frame = +3
Query: 129 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKS 287
MAKSKN + HNQS KAH+NGIKKPK R S KG DPKF RN R++ G K+
Sbjct: 1 MAKSKNSSQHNQSRKAHRNGIKKPKTSRYPSLKGTDPKFRRNHRHALHGTAKA 53
>sptrnew|EAA37042|EAA37042 GLP_433_2266_2454.
Length = 62
Score = 67.0 bits (162), Expect = 2e-10
Identities = 32/52 (61%), Positives = 39/52 (75%)
Frame = +3
Query: 129 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKK 284
MAK KNHT+ NQ+ K H+NGIKKPK+ TS KGM PK+LRNLR SR + +
Sbjct: 1 MAKLKNHTSKNQNRKDHRNGIKKPKKSAYTSHKGMCPKYLRNLRRSRANDPR 52
>sptr|Q8SXW1|Q8SXW1 RH58777p.
Length = 56
Score = 65.5 bits (158), Expect = 5e-10
Identities = 31/48 (64%), Positives = 35/48 (72%)
Frame = +3
Query: 129 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRK 272
MAKSKNHT HNQ+ KAH+NGIK+P R R ST GMD KFL N Y +
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQHYDAR 48
>sw|Q92366|RL29_SCHPO 60S ribosomal protein L29 (L43).
Length = 60
Score = 64.7 bits (156), Expect = 9e-10
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +3
Query: 132 AKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKG 275
AKSKNHT HNQ+ KAH+NGIK+P++HR S K D KF RN +++ +G
Sbjct: 1 AKSKNHTNHNQNKKAHRNGIKRPQKHRYDSLKYRDAKFRRNQKFANRG 48
>sptr|Q9NAG9|Q9NAG9 Y47H9C.14 protein.
Length = 87
Score = 59.3 bits (142), Expect = 4e-08
Identities = 26/55 (47%), Positives = 38/55 (69%)
Frame = +3
Query: 120 PEEMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKK 284
P K +NHT HN++ KAH+NGI KPK+H S +G +F+++LR+ RK NK+
Sbjct: 9 PHNAWKPENHTNHNRNNKAHRNGITKPKKHIFLSIEGSRRQFIKSLRFFRKNNKR 63
>sptr|Q9Y083|Q9Y083 60S ribosomal protein L29 (Fragment).
Length = 35
Score = 52.4 bits (124), Expect = 5e-06
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = +3
Query: 129 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGM 233
MAKSKNHT HNQ+ K H+NGI KPKR R S KG+
Sbjct: 1 MAKSKNHTNHNQNRKDHRNGIYKPKRERYMSMKGV 35
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 379,911,042
Number of Sequences: 1272877
Number of extensions: 6326792
Number of successful extensions: 17000
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16985
length of database: 406,886,216
effective HSP length: 117
effective length of database: 257,959,607
effective search space used: 23990243451
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)