BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.662
(940 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sw|O48557|RL17_MAIZE 60S ribosomal protein L17. 345 4e-94
sw|P35267|R172_HORVU 60S ribosomal protein L17-2. 310 2e-83
sptr|Q9AXS0|Q9AXS0 Ribosomal protein L17-1. 307 2e-82
sw|P35266|R171_HORVU 60S ribosomal protein L17-1. 303 3e-81
sptr|Q947H2|Q947H2 Ribosomal protein. 295 6e-79
sw|P51413|R172_ARATH 60S ribosomal protein L17-2. 292 5e-78
sw|Q93VI3|R171_ARATH 60S ribosomal protein L17-1. 291 7e-78
sw|P37380|RL17_PODCA 60S ribosomal protein L17 (L23). 230 2e-59
sptr|Q90YV1|Q90YV1 Ribosomal protein L17. 226 5e-58
sptrnew|AAH55097|AAH55097 Ribosomal protein L17. 225 8e-58
sptr|Q7ZY53|Q7ZY53 Similar to ribosomal protein L17 (Fragment). 224 2e-57
sptr|Q80V08|Q80V08 Rpl17 protein (Fragment). 223 4e-57
sptr|Q9IA75|Q9IA75 Ribosomal protein L17. 222 5e-57
sptrnew|AAH52940|AAH52940 Hypothetical protein. 222 7e-57
sw|P18621|RL17_HUMAN 60S ribosomal protein L17 (L23). 222 7e-57
sptrnew|AAH54424|AAH54424 Hypothetical protein. 221 9e-57
sptrnew|BAB22345|BAB22345 Adult male kidney cDNA, RIKEN full-len... 221 9e-57
sw|P24049|RL17_RAT 60S ribosomal protein L17 (L23) (Amino acid s... 221 9e-57
sw|Q9CPR4|RL17_MOUSE 60S ribosomal protein L17 (L23). 221 9e-57
sptr|Q862E3|Q862E3 Similar to ribosomal protein L17 (Fragment). 221 9e-57
sptr|Q862J9|Q862J9 Similar to ribosomal protein L17 (Fragment). 221 9e-57
sptr|Q862T7|Q862T7 Similar to ribosomal protein L17 (Fragment). 219 4e-56
sptrnew|EAA00882|EAA00882 ENSANGP00000011784 (Fragment). 217 2e-55
sptr|Q9BL19|Q9BL19 Hypothetical 21.5 kDa protein. 215 8e-55
sptr|Q9W3W8|Q9W3W8 CG3203 protein (GM02242p). 214 1e-54
sptr|Q801J0|Q801J0 Ribosomal protein L17 (Fragment). 213 3e-54
sptr|Q801I9|Q801I9 Ribosomal protein L17 (Fragment). 208 8e-53
sptr|Q86LY8|Q86LY8 Ribosomal protein L17 (Fragment). 208 1e-52
sw|Q9HE25|RL17_NEUCR 60S ribosomal protein L17. 196 3e-49
sptr|Q86LY9|Q86LY9 Ribosomal protein L17 (Fragment). 196 3e-49
>sw|O48557|RL17_MAIZE 60S ribosomal protein L17.
Length = 171
Score = 345 bits (886), Expect = 4e-94
Identities = 171/171 (100%), Positives = 171/171 (100%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF
Sbjct: 1 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 60
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV
Sbjct: 61 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 120
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARKQ 334
NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARKQ
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARKQ 171
>sw|P35267|R172_HORVU 60S ribosomal protein L17-2.
Length = 172
Score = 310 bits (794), Expect = 2e-83
Identities = 148/170 (87%), Positives = 161/170 (94%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
MVKYS++P NPTKSAKA G+DLRVHFKNTRETAFALR++PL KAKRYLEDV+AHKQAIPF
Sbjct: 1 MVKYSRDPSNPTKSAKACGKDLRVHFKNTRETAFALRRMPLGKAKRYLEDVLAHKQAIPF 60
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
RRYC GVGRTAQ K+R NGQGRWP KSA+F+LDLLKNAESNA+VKGLDVDNLY+SHIQV
Sbjct: 61 RRYCRGVGRTAQVKNRQPNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDNLYISHIQV 120
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 337
NQAQKQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEADN+VA RK
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEADNVVAPRK 170
>sptr|Q9AXS0|Q9AXS0 Ribosomal protein L17-1.
Length = 171
Score = 307 bits (786), Expect = 2e-82
Identities = 148/170 (87%), Positives = 160/170 (94%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
MVKYS +P NPTKSAKAMGRDLRVHFKNTRETAFALRK+PL KAKRYLEDV+AHKQAIPF
Sbjct: 1 MVKYSTDPANPTKSAKAMGRDLRVHFKNTRETAFALRKMPLNKAKRYLEDVLAHKQAIPF 60
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
RRYC GVGRTAQAK+R NGQGRWP KSA+F+LDLLKNAESNA+VKGLDVD LY+SHIQV
Sbjct: 61 RRYCRGVGRTAQAKNRQPNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALYISHIQV 120
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 337
NQAQKQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEA++ +A RK
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESQIAPRK 170
>sw|P35266|R171_HORVU 60S ribosomal protein L17-1.
Length = 170
Score = 303 bits (775), Expect = 3e-81
Identities = 145/169 (85%), Positives = 158/169 (93%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
MVKYS +P NPTKSAKAMGRDLRVHFKNTRETAFALRK+PL KAKRYLEDV+AHKQAIPF
Sbjct: 1 MVKYSTDPANPTKSAKAMGRDLRVHFKNTRETAFALRKMPLNKAKRYLEDVLAHKQAIPF 60
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
RRYC GVGRTAQ K+R NGQGRWP KSA+F+LDLLKNAESNA+VKGLDVD LY+SHIQV
Sbjct: 61 RRYCRGVGRTAQVKNRQPNGQGRWPAKSAKFVLDLLKNAESNAEVKGLDVDALYISHIQV 120
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAAR 340
NQAQKQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEA++ +A +
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESHIARK 169
>sptr|Q947H2|Q947H2 Ribosomal protein.
Length = 175
Score = 295 bits (755), Expect = 6e-79
Identities = 144/170 (84%), Positives = 156/170 (91%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
MVKYS+EP NPTKS KA G DLRVHFKNTRETA ALRK+PL KAKRYLEDV+AHKQAIPF
Sbjct: 1 MVKYSREPENPTKSCKARGSDLRVHFKNTRETAHALRKMPLGKAKRYLEDVLAHKQAIPF 60
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
R+C GVGRTAQAK+RHSNGQGRWPVKSA FILDLLKNAESNA+VKGLDVD+LY+SHIQV
Sbjct: 61 TRFCRGVGRTAQAKNRHSNGQGRWPVKSANFILDLLKNAESNAEVKGLDVDSLYISHIQV 120
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 337
NQAQKQRRRTYRAHGRINPYMS+PCHIELILSEKEE V+KE + +A RK
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSNPCHIELILSEKEESVRKEPETQLAPRK 170
>sw|P51413|R172_ARATH 60S ribosomal protein L17-2.
Length = 175
Score = 292 bits (747), Expect = 5e-78
Identities = 142/171 (83%), Positives = 155/171 (90%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
MVKYSQEP N TKS KA G DLRVHFKNTRETA A+RKLPL KAKRYLEDVIAHKQAIPF
Sbjct: 1 MVKYSQEPDNQTKSCKARGSDLRVHFKNTRETAHAIRKLPLIKAKRYLEDVIAHKQAIPF 60
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
R+C GVGRTAQAK+RHSNGQGRWP KSA+F+LDLLKNAESNA+VKGLDVD L++SHIQV
Sbjct: 61 TRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQV 120
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARKQ 334
NQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKE + +AA+ +
Sbjct: 121 NQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLAAKSK 171
>sw|Q93VI3|R171_ARATH 60S ribosomal protein L17-1.
Length = 176
Score = 291 bits (746), Expect = 7e-78
Identities = 142/171 (83%), Positives = 155/171 (90%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
MVKYSQEP N TKS KA G DLRVHFKNTRETA A+RKLPL KAKRYLEDVIAHKQAIPF
Sbjct: 1 MVKYSQEPDNITKSCKARGADLRVHFKNTRETAHAIRKLPLNKAKRYLEDVIAHKQAIPF 60
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
R+C GVGRTAQAK+RHSNGQGRWP KSA+F+LDLLKNAESNA+VKGLDVD L++SHIQV
Sbjct: 61 TRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQV 120
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARKQ 334
NQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKE + +AA+ +
Sbjct: 121 NQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLAAKSK 171
>sw|P37380|RL17_PODCA 60S ribosomal protein L17 (L23).
Length = 183
Score = 230 bits (586), Expect = 2e-59
Identities = 115/165 (69%), Positives = 134/165 (81%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
M KYS +P NP KS KA G LRVHFKNTRETA A++K+ + KA RYL+DVIA KQ IPF
Sbjct: 1 MGKYSIDPENPIKSCKARGSYLRVHFKNTRETAQAIKKMHIRKAYRYLKDVIAKKQIIPF 60
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
RR+CGGVGR AQAK+ + QGRWPVKSA F+L LLKNAESNADVKGLDVD+L + HIQV
Sbjct: 61 RRFCGGVGRKAQAKA-FKHTQGRWPVKSAEFLLGLLKNAESNADVKGLDVDSLVIDHIQV 119
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNI 352
N+A RRRTYRAHGRINPYMSSPCHIE+I+SEKE+ V + + +
Sbjct: 120 NRAPYMRRRTYRAHGRINPYMSSPCHIEMIVSEKEQVVPRAEEEV 164
>sptr|Q90YV1|Q90YV1 Ribosomal protein L17.
Length = 184
Score = 226 bits (575), Expect = 5e-58
Identities = 110/170 (64%), Positives = 136/170 (80%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
MV+YS +P NPTKS KA G +LRVHFKNTRETA A++ + + KA +YL+DV+ Q +PF
Sbjct: 1 MVRYSLDPENPTKSCKARGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVVVKHQCVPF 60
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
RRY GGVGR AQAK +H+ QGRWP KSA F+L +LKNAESNA++KGLDVD+L + HIQV
Sbjct: 61 RRYNGGVGRCAQAK-QHNWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 337
N+A K RRRTYRAHGRINPYMSSPCHIE+IL+EKE+ V K + + +K
Sbjct: 120 NKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVSQKKK 169
>sptrnew|AAH55097|AAH55097 Ribosomal protein L17.
Length = 184
Score = 225 bits (573), Expect = 8e-58
Identities = 110/170 (64%), Positives = 135/170 (79%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
MV+YS +P NPTKS K+ G +LRVHFKNTRETA A++ + + KA +YL+DVI Q +PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKANKYLKDVIVKHQCVPF 60
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
RRY GGVGR AQAK +H QGRWP KSA F+L +LKNAESNA++KGLDVD+L + HIQV
Sbjct: 61 RRYNGGVGRCAQAK-QHDWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 337
N+A K RRRTYRAHGRINPYMSSPCHIE+IL+EKE+ V K + + +K
Sbjct: 120 NKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVSQKKK 169
>sptr|Q7ZY53|Q7ZY53 Similar to ribosomal protein L17 (Fragment).
Length = 187
Score = 224 bits (570), Expect = 2e-57
Identities = 111/170 (65%), Positives = 133/170 (78%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
MV+YS +P NPTKS KA G +LRVHFKNTRETA A++ + + KA +YL+DV KQ +PF
Sbjct: 4 MVRYSLDPENPTKSCKARGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPF 63
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
RRY GGVGR AQAK QGRWP KSA F+L +LKNAESNA+VKGLDVD+L + HIQV
Sbjct: 64 RRYNGGVGRCAQAKQWDWT-QGRWPKKSANFLLHMLKNAESNAEVKGLDVDSLVIEHIQV 122
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 337
N+A K RRRTYRAHGRINPYMSSPCHIE+IL+EKE+ V K + + +K
Sbjct: 123 NKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKK 172
>sptr|Q80V08|Q80V08 Rpl17 protein (Fragment).
Length = 194
Score = 223 bits (567), Expect = 4e-57
Identities = 110/172 (63%), Positives = 135/172 (78%)
Frame = -2
Query: 852 AAMVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAI 673
A MV+YS +P NPTKS K+ G +LRVHFKNTRETA A++ + + KA +YL+DV KQ +
Sbjct: 9 AKMVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCV 68
Query: 672 PFRRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHI 493
PFRRY GGVGR AQAK + QGRWP KSA F+L +LKNAESNA++KGLDVD+L + HI
Sbjct: 69 PFRRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHI 127
Query: 492 QVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 337
QVN+A K RRRTYRAHGRINPYMSSPCHIE+IL+EKE+ V K + + +K
Sbjct: 128 QVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKK 179
>sptr|Q9IA75|Q9IA75 Ribosomal protein L17.
Length = 184
Score = 222 bits (566), Expect = 5e-57
Identities = 109/170 (64%), Positives = 133/170 (78%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
MV+YS +P NPTKS K+ G +LRVHFKNTRETA A++ + + KA +YL DVI Q +PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKANKYLRDVIVQHQCVPF 60
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
RRY GGVGR AQAK + QGRWP KSA F+L +LKNAESNA++KGLDVD+L + HIQV
Sbjct: 61 RRYNGGVGRCAQAK-QFGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 337
N+A K RRRTYRAHGRINPYMSSPCHIE+IL+EKE+ V K + + +K
Sbjct: 120 NKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKK 169
>sptrnew|AAH52940|AAH52940 Hypothetical protein.
Length = 184
Score = 222 bits (565), Expect = 7e-57
Identities = 109/170 (64%), Positives = 134/170 (78%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
MV+YS +P NPTKS K+ G +LRVHFKNTRETA A++ + + KA +YL+DV KQ +PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
RRY GGVGR AQAK + QGRWP KSA F+L +LKNAESNA++KGLDVD+L + HIQV
Sbjct: 61 RRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 337
N+A K RRRTYRAHGRINPYMSSPCHIE+IL+EKE+ V K + + +K
Sbjct: 120 NKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKK 169
>sw|P18621|RL17_HUMAN 60S ribosomal protein L17 (L23).
Length = 184
Score = 222 bits (565), Expect = 7e-57
Identities = 109/170 (64%), Positives = 134/170 (78%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
MV+YS +P NPTKS K+ G +LRVHFKNTRETA A++ + + KA +YL+DV KQ +PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
RRY GGVGR AQAK + QGRWP KSA F+L +LKNAESNA++KGLDVD+L + HIQV
Sbjct: 61 RRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 337
N+A K RRRTYRAHGRINPYMSSPCHIE+IL+EKE+ V K + + +K
Sbjct: 120 NKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKK 169
>sptrnew|AAH54424|AAH54424 Hypothetical protein.
Length = 184
Score = 221 bits (564), Expect = 9e-57
Identities = 109/170 (64%), Positives = 134/170 (78%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
MV+YS +P NPTKS K+ G +LRVHFKNTRETA A++ + + KA +YL+DV KQ +PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPF 60
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
RRY GGVGR AQAK + QGRWP KSA F+L +LKNAESNA++KGLDVD+L + HIQV
Sbjct: 61 RRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 337
N+A K RRRTYRAHGRINPYMSSPCHIE+IL+EKE+ V K + + +K
Sbjct: 120 NKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKK 169
>sptrnew|BAB22345|BAB22345 Adult male kidney cDNA, RIKEN full-length
enriched library, clone:0610037F23 product:ribosomal
protein L17, full insert sequence.
Length = 184
Score = 221 bits (564), Expect = 9e-57
Identities = 109/170 (64%), Positives = 134/170 (78%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
MV+YS +P NPTKS K+ G +LRVHFKNTRETA A++ + + KA +YL+DV KQ +PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPF 60
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
RRY GGVGR AQAK + QGRWP KSA F+L +LKNAESNA++KGLDVD+L + HIQV
Sbjct: 61 RRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 337
N+A K RRRTYRAHGRINPYMSSPCHIE+IL+EKE+ V K + + +K
Sbjct: 120 NKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKK 169
>sw|P24049|RL17_RAT 60S ribosomal protein L17 (L23) (Amino acid
starvation-induced protein) (ASI).
Length = 184
Score = 221 bits (564), Expect = 9e-57
Identities = 109/170 (64%), Positives = 134/170 (78%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
MV+YS +P NPTKS K+ G +LRVHFKNTRETA A++ + + KA +YL+DV KQ +PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPF 60
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
RRY GGVGR AQAK + QGRWP KSA F+L +LKNAESNA++KGLDVD+L + HIQV
Sbjct: 61 RRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 337
N+A K RRRTYRAHGRINPYMSSPCHIE+IL+EKE+ V K + + +K
Sbjct: 120 NKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKK 169
>sw|Q9CPR4|RL17_MOUSE 60S ribosomal protein L17 (L23).
Length = 184
Score = 221 bits (564), Expect = 9e-57
Identities = 109/170 (64%), Positives = 134/170 (78%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
MV+YS +P NPTKS K+ G +LRVHFKNTRETA A++ + + KA +YL+DV KQ +PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPF 60
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
RRY GGVGR AQAK + QGRWP KSA F+L +LKNAESNA++KGLDVD+L + HIQV
Sbjct: 61 RRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 337
N+A K RRRTYRAHGRINPYMSSPCHIE+IL+EKE+ V K + + +K
Sbjct: 120 NKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKK 169
>sptr|Q862E3|Q862E3 Similar to ribosomal protein L17 (Fragment).
Length = 179
Score = 221 bits (564), Expect = 9e-57
Identities = 109/170 (64%), Positives = 134/170 (78%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
MV+YS +P NPTKS K+ G +LRVHFKNTRETA A++ + + KA +YL+DV KQ +PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPF 60
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
RRY GGVGR AQAK + QGRWP KSA F+L +LKNAESNA++KGLDVD+L + HIQV
Sbjct: 61 RRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 337
N+A K RRRTYRAHGRINPYMSSPCHIE+IL+EKE+ V K + + +K
Sbjct: 120 NKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKK 169
>sptr|Q862J9|Q862J9 Similar to ribosomal protein L17 (Fragment).
Length = 179
Score = 221 bits (564), Expect = 9e-57
Identities = 109/170 (64%), Positives = 134/170 (78%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
MV+YS +P NPTKS K+ G +LRVHFKNTRETA A++ + + KA +YL+DV KQ +PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPF 60
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
RRY GGVGR AQAK + QGRWP KSA F+L +LKNAESNA++KGLDVD+L + HIQV
Sbjct: 61 RRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 337
N+A K RRRTYRAHGRINPYMSSPCHIE+IL+EKE+ V K + + +K
Sbjct: 120 NKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKK 169
>sptr|Q862T7|Q862T7 Similar to ribosomal protein L17 (Fragment).
Length = 176
Score = 219 bits (558), Expect = 4e-56
Identities = 109/170 (64%), Positives = 132/170 (77%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
MV+YS +P NPTKS K+ G +LRVHFKNTRETA A++ + + KA +YL+DV KQ +PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPF 60
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
RRY GGVGR AQAK + QGRWP KSA F+L +LKNAESNA++KGLDVD+L + HIQV
Sbjct: 61 RRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQV 119
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 337
N+A K RRRTYRAHGRINPYMSSPCHIE+IL+EKE+ V K + K
Sbjct: 120 NKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEECCTEEK 169
>sptrnew|EAA00882|EAA00882 ENSANGP00000011784 (Fragment).
Length = 192
Score = 217 bits (552), Expect = 2e-55
Identities = 107/175 (61%), Positives = 134/175 (76%)
Frame = -2
Query: 858 FAAAMVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQ 679
F M +Y++EP N +KS K+ G +LRVHFKNTRETA A++++PL +A+R+L++VI K+
Sbjct: 2 FGFKMGRYAKEPDNASKSCKSRGSNLRVHFKNTRETALAIKRMPLRRAQRFLKNVIEKKE 61
Query: 678 AIPFRRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVS 499
+PFRR+ GGVGR AQAK GRWP KSA F+L LLKNAE+NAD KGLDVD L ++
Sbjct: 62 CVPFRRFNGGVGRCAQAK-HWGTSVGRWPKKSAEFLLQLLKNAEANADYKGLDVDRLVIN 120
Query: 498 HIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARKQ 334
HIQVN+A RRRTYRAHGRINPYMSSPCHIEL L+EKE+ V K D A+K+
Sbjct: 121 HIQVNRAPCLRRRTYRAHGRINPYMSSPCHIELSLTEKEDVVTKATDESEQAKKK 175
>sptr|Q9BL19|Q9BL19 Hypothetical 21.5 kDa protein.
Length = 187
Score = 215 bits (547), Expect = 8e-55
Identities = 106/163 (65%), Positives = 126/163 (77%)
Frame = -2
Query: 843 VKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPFR 664
V YS+ P N TKS KA G DLRVHFKNT E A ALR +PL +A+ +L V HK+ +PFR
Sbjct: 4 VHYSRAPENSTKSCKARGSDLRVHFKNTHEAAMALRGMPLRRAQAFLNHVKEHKEIVPFR 63
Query: 663 RYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQVN 484
R+ GG+GR AQ K ++ QGRWPVKSA F+LDLLKNAESNA+ KGLDVD+L + HI V
Sbjct: 64 RFHGGIGRAAQTKQWNTT-QGRWPVKSADFLLDLLKNAESNAEYKGLDVDHLVIEHINVQ 122
Query: 483 QAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADN 355
+A K RRRTYRAHGRINPYMSSPCHIE+IL+EKE+ V K D+
Sbjct: 123 RAAKLRRRTYRAHGRINPYMSSPCHIEVILAEKEDVVSKPTDD 165
>sptr|Q9W3W8|Q9W3W8 CG3203 protein (GM02242p).
Length = 186
Score = 214 bits (545), Expect = 1e-54
Identities = 108/170 (63%), Positives = 131/170 (77%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
M +YS+E N KS KA G +LRVHFKNT ETA A++++PL +A+RYL+ VI K+ +PF
Sbjct: 1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
RR+ GGVGR AQAK + QGRWP KSA F+L LL+NAE+NAD KGLD D L V HIQV
Sbjct: 61 RRFNGGVGRCAQAKQWKTT-QGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQV 119
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 337
N+AQ RRRTYRAHGRINPYMSSPCH+E+IL+EKEE V K D+ A +K
Sbjct: 120 NRAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEELVSKATDDEPAKKK 169
>sptr|Q801J0|Q801J0 Ribosomal protein L17 (Fragment).
Length = 157
Score = 213 bits (542), Expect = 3e-54
Identities = 103/157 (65%), Positives = 127/157 (80%)
Frame = -2
Query: 819 NPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPFRRYCGGVGR 640
NPTKS KA G +LRVHFKNTRETA ++ + + KA ++L+DV+ +Q +PFRRY GGVGR
Sbjct: 1 NPTKSCKARGSNLRVHFKNTRETAQTIKGMHIRKATKFLKDVVIKRQCVPFRRYNGGVGR 60
Query: 639 TAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQVNQAQKQRRR 460
AQAK+ H QGRWP KSA F+L +LKNAESNA++KGLDVD+L + HIQVN+A K RRR
Sbjct: 61 CAQAKAWHWT-QGRWPKKSAEFLLHILKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRR 119
Query: 459 TYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIV 349
TYRAHGRINPYMSSPCHIE+IL+EKE+ V K + +V
Sbjct: 120 TYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVV 156
>sptr|Q801I9|Q801I9 Ribosomal protein L17 (Fragment).
Length = 157
Score = 208 bits (530), Expect = 8e-53
Identities = 104/158 (65%), Positives = 122/158 (77%)
Frame = -2
Query: 819 NPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPFRRYCGGVGR 640
NPTKS KA G +LRVHF+NTRETA ++ + + KA +YL+DV+ KQ +PFRRY GGVGR
Sbjct: 1 NPTKSCKARGSNLRVHFRNTRETAHTIKGMHIRKATKYLKDVVLMKQCVPFRRYNGGVGR 60
Query: 639 TAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQVNQAQKQRRR 460
AQAK+ QGRWP KSA F+L LLKNAESNA+ KGLDVD+L + HIQVN+A RRR
Sbjct: 61 CAQAKAWDWT-QGRWPKKSAEFLLQLLKNAESNAEFKGLDVDSLVIEHIQVNKAPHMRRR 119
Query: 459 TYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVA 346
TYRAHGRINPYMSSPCHIELIL+EKE V K + A
Sbjct: 120 TYRAHGRINPYMSSPCHIELILTEKEHVVPKPEEEAAA 157
>sptr|Q86LY8|Q86LY8 Ribosomal protein L17 (Fragment).
Length = 157
Score = 208 bits (529), Expect = 1e-52
Identities = 105/156 (67%), Positives = 122/156 (78%)
Frame = -2
Query: 819 NPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPFRRYCGGVGR 640
N TKS KA G +LRVHFKNTRETA AL+ + + KA R+L+DV A KQ +PFRR+ GGVGR
Sbjct: 1 NATKSCKARGSNLRVHFKNTRETANALKGMHIRKATRFLKDVTAKKQIVPFRRFNGGVGR 60
Query: 639 TAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQVNQAQKQRRR 460
AQ K+ QGRWP KSA F+L LLKNAESNA+ KGLDVD+L V HIQVN+A K RRR
Sbjct: 61 KAQCKAWRWT-QGRWPKKSAEFLLQLLKNAESNAEFKGLDVDSLMVEHIQVNRAAKMRRR 119
Query: 459 TYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNI 352
TYRAHGRINPYMSSPCHIE+ILSE+E + K D +
Sbjct: 120 TYRAHGRINPYMSSPCHIEMILSEQETVIAKSEDEV 155
>sw|Q9HE25|RL17_NEUCR 60S ribosomal protein L17.
Length = 186
Score = 196 bits (499), Expect = 3e-49
Identities = 99/160 (61%), Positives = 120/160 (75%)
Frame = -2
Query: 846 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 667
MV+Y+ P KSA++ G LRV FKNTRETA A+ L +A+++LE+V+ K+A+P
Sbjct: 1 MVRYAATEIAPAKSARSRGSYLRVSFKNTRETAQAINGWKLQRAQKFLENVLEKKEAVPM 60
Query: 666 RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 487
RRY GG GR AQ K + + RWP KSA F+L LLKNAE+NAD KGLD NL V HIQV
Sbjct: 61 RRYAGGTGRAAQGK-QFGVSRARWPAKSAEFLLGLLKNAEANADAKGLDTGNLVVKHIQV 119
Query: 486 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKK 367
NQA KQRRRTYRAHGRINPYMS+PCHIELIL+E +E V+K
Sbjct: 120 NQAPKQRRRTYRAHGRINPYMSNPCHIELILTEADEVVQK 159
>sptr|Q86LY9|Q86LY9 Ribosomal protein L17 (Fragment).
Length = 157
Score = 196 bits (499), Expect = 3e-49
Identities = 99/151 (65%), Positives = 117/151 (77%)
Frame = -2
Query: 819 NPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPFRRYCGGVGR 640
N KS KA G +LRVHFKNTRE A ++ + + KA ++L+ VI KQ +PFRRY GGVGR
Sbjct: 1 NAAKSCKARGSNLRVHFKNTREAAHTIKGMHIRKAIKFLKAVIVKKQCVPFRRYNGGVGR 60
Query: 639 TAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQVNQAQKQRRR 460
AQAK+ QGRWP KSA F+L LLKNAESNA+ KGLDVD+L + H+QVN+A + RRR
Sbjct: 61 CAQAKAWGWT-QGRWPKKSAVFLLQLLKNAESNAEFKGLDVDSLVIEHVQVNKAPRMRRR 119
Query: 459 TYRAHGRINPYMSSPCHIELILSEKEEPVKK 367
TYRAHGRINPYMSSPCHIE+ILSEKE V K
Sbjct: 120 TYRAHGRINPYMSSPCHIEIILSEKEHIVPK 150
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 721,876,481
Number of Sequences: 1272877
Number of extensions: 15693503
Number of successful extensions: 44905
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44836
length of database: 406,886,216
effective HSP length: 122
effective length of database: 251,595,222
effective search space used: 47803092180
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)