BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.65
(673 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sw|P27807|H2B1_WHEAT Histone H2B. 196 2e-49
sw|P54348|H2B5_MAIZE Histone H2B. 196 2e-49
sw|P30756|H2B2_MAIZE Histone H2B.2. 196 3e-49
sw|Q43261|H2B3_MAIZE Histone H2B.3. 196 3e-49
sw|P05621|H2B2_WHEAT Histone H2B.2. 187 1e-46
sw|P30755|H2B1_MAIZE Histone H2B.1. 187 1e-46
sptr|Q9LGI2|Q9LGI2 Putative histone H2B. 184 9e-46
sptr|Q94JJ4|Q94JJ4 Putative histone H2B. 183 1e-45
sptr|Q94JE1|Q94JE1 Putative histone H2B. 183 2e-45
sptr|Q94JJ7|Q94JJ7 Putative histone H2B. 183 2e-45
sptr|Q9LGH8|Q9LGH8 Putative histone H2B. 183 2e-45
sptr|Q9LGH6|Q9LGH6 Putative histone H2B. 182 3e-45
sptr|Q9LGH4|Q9LGH4 Putative histone H2B. 181 6e-45
sptr|Q43724|Q43724 Histone 2B (Histone H2B) (Fragment). 180 1e-44
sptr|Q43217|Q43217 Protein H2B-8 (Histone H2B). 180 1e-44
sptr|Q43216|Q43216 Protein H2B-6 (Histone H2B). 180 1e-44
sw|P49120|H2B4_MAIZE Histone H2B.4. 179 2e-44
sptr|Q943L2|Q943L2 Putative histone H2B. 179 4e-44
sptr|Q43215|Q43215 Protein H2B153 (Histone H2B). 174 7e-43
sptr|Q9FFC0|Q9FFC0 Histone H2B like protein. 174 7e-43
sw|O22582|H2B_GOSHI Histone H2B. 174 9e-43
sptr|Q84L43|Q84L43 Putative histone H4. 173 2e-42
sw|P40283|H2B_ARATH Histone H2B. 173 2e-42
sptr|Q96516|Q96516 Histone H2B like protein. 173 2e-42
sptr|Q9LZT0|Q9LZT0 Histone H2B-like protein. 173 2e-42
sptr|O23629|O23629 Histone H2B (At3g45980). 173 2e-42
sptr|O65819|O65819 Histone H2B-3 (Fragment). 172 3e-42
sw|O49118|H2B_CAPAN Histone H2B (CaH2B). 172 3e-42
sptr|Q9SI96|Q9SI96 Putative histone H2B (At2g28720/T11P11.3). 172 4e-42
sptr|Q9M3H6|Q9M3H6 Histone H2B. 171 6e-42
>sw|P27807|H2B1_WHEAT Histone H2B.
Length = 152
Score = 196 bits (498), Expect = 2e-49
Identities = 105/116 (90%), Positives = 105/116 (90%)
Frame = +3
Query: 189 RLPAGKSAGKEGGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 368
RLPAGKSA KEGG D SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND
Sbjct: 38 RLPAGKSAAKEGG-DKKGKKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 96
Query: 369 IFEKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
IFEKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 97 IFEKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 152
>sw|P54348|H2B5_MAIZE Histone H2B.
Length = 154
Score = 196 bits (498), Expect = 2e-49
Identities = 105/116 (90%), Positives = 105/116 (90%)
Frame = +3
Query: 189 RLPAGKSAGKEGGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 368
RLPAGKSAGKEGG D SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND
Sbjct: 40 RLPAGKSAGKEGG-DKKGRKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 98
Query: 369 IFEKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
IFEKLA EAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 99 IFEKLAAEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 154
>sw|P30756|H2B2_MAIZE Histone H2B.2.
Length = 150
Score = 196 bits (497), Expect = 3e-49
Identities = 103/116 (88%), Positives = 104/116 (89%)
Frame = +3
Query: 189 RLPAGKSAGKEGGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 368
R+PAGKSAGKEGG SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND
Sbjct: 35 RVPAGKSAGKEGGEGKRGRKKGKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 94
Query: 369 IFEKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
IFEKLA EAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 95 IFEKLAAEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 150
>sw|Q43261|H2B3_MAIZE Histone H2B.3.
Length = 153
Score = 196 bits (497), Expect = 3e-49
Identities = 102/116 (87%), Positives = 104/116 (89%)
Frame = +3
Query: 189 RLPAGKSAGKEGGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 368
RLPAGKSAGKEGG SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND
Sbjct: 38 RLPAGKSAGKEGGEGKKGKKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 97
Query: 369 IFEKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
IFEKLA E+AKLARYNKKPT+TSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 98 IFEKLAAESAKLARYNKKPTVTSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 153
>sw|P05621|H2B2_WHEAT Histone H2B.2.
Length = 149
Score = 187 bits (475), Expect = 1e-46
Identities = 101/121 (83%), Positives = 104/121 (85%), Gaps = 5/121 (4%)
Frame = +3
Query: 189 RLPAGKSAGKEGGVDXXXXXXXXXS-----VETYKIYIFKVLKQVHPDIGISSKAMSIMN 353
RLPAGK+A KE G + S VETYKIYIFKVLKQVHPDIGISSKAMSIMN
Sbjct: 29 RLPAGKTASKEAGGEGKTRGRKKGSKAKKGVETYKIYIFKVLKQVHPDIGISSKAMSIMN 88
Query: 354 SFINDIFEKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTS 533
SFINDIFEKLAGE+AKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTS
Sbjct: 89 SFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTS 148
Query: 534 S 536
S
Sbjct: 149 S 149
>sw|P30755|H2B1_MAIZE Histone H2B.1.
Length = 151
Score = 187 bits (475), Expect = 1e-46
Identities = 101/116 (87%), Positives = 102/116 (87%)
Frame = +3
Query: 189 RLPAGKSAGKEGGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 368
RLPAGKS KEGG SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND
Sbjct: 38 RLPAGKS--KEGGEGKKGKKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 95
Query: 369 IFEKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
IFEKLA E+AKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 96 IFEKLAAESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 151
>sptr|Q9LGI2|Q9LGI2 Putative histone H2B.
Length = 153
Score = 184 bits (467), Expect = 9e-46
Identities = 97/116 (83%), Positives = 100/116 (86%)
Frame = +3
Query: 189 RLPAGKSAGKEGGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 368
RLPAGK+ G SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND
Sbjct: 38 RLPAGKAEKSSGEGKKAGRKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 97
Query: 369 IFEKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
IFEKLAGE+AKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 98 IFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 153
>sptr|Q94JJ4|Q94JJ4 Putative histone H2B.
Length = 153
Score = 183 bits (465), Expect = 1e-45
Identities = 97/116 (83%), Positives = 100/116 (86%)
Frame = +3
Query: 189 RLPAGKSAGKEGGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 368
RLPAGK+ G SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND
Sbjct: 38 RLPAGKAEKGSGEGKKAGRKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 97
Query: 369 IFEKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
IFEKLAGE+AKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 98 IFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 153
>sptr|Q94JE1|Q94JE1 Putative histone H2B.
Length = 155
Score = 183 bits (464), Expect = 2e-45
Identities = 99/118 (83%), Positives = 100/118 (84%), Gaps = 2/118 (1%)
Frame = +3
Query: 189 RLPAGKS--AGKEGGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFI 362
RLPAGK EG D SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFI
Sbjct: 38 RLPAGKGEKGSGEGKKDRAGRKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFI 97
Query: 363 NDIFEKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
NDIFEKLA EAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 98 NDIFEKLAAEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 155
>sptr|Q94JJ7|Q94JJ7 Putative histone H2B.
Length = 153
Score = 183 bits (464), Expect = 2e-45
Identities = 97/116 (83%), Positives = 100/116 (86%)
Frame = +3
Query: 189 RLPAGKSAGKEGGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 368
RLPAGK+ G SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND
Sbjct: 38 RLPAGKAEKGSGEGRKAGRKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 97
Query: 369 IFEKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
IFEKLAGE+AKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 98 IFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 153
>sptr|Q9LGH8|Q9LGH8 Putative histone H2B.
Length = 153
Score = 183 bits (464), Expect = 2e-45
Identities = 97/116 (83%), Positives = 99/116 (85%)
Frame = +3
Query: 189 RLPAGKSAGKEGGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 368
RLPAGK G SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND
Sbjct: 38 RLPAGKGEKGSGEGKKAGRKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 97
Query: 369 IFEKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
IFEKLAGE+AKLARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 98 IFEKLAGESAKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
>sptr|Q9LGH6|Q9LGH6 Putative histone H2B.
Length = 153
Score = 182 bits (463), Expect = 3e-45
Identities = 97/116 (83%), Positives = 99/116 (85%)
Frame = +3
Query: 189 RLPAGKSAGKEGGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 368
RLPAGK G SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND
Sbjct: 38 RLPAGKGEKGSGEGKKAGRKKGKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 97
Query: 369 IFEKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
IFEKLAGE+AKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 98 IFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 153
>sptr|Q9LGH4|Q9LGH4 Putative histone H2B.
Length = 153
Score = 181 bits (460), Expect = 6e-45
Identities = 97/116 (83%), Positives = 98/116 (84%)
Frame = +3
Query: 189 RLPAGKSAGKEGGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 368
RLPAGK G SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND
Sbjct: 38 RLPAGKGEKGSGEGKKAGRKKGKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 97
Query: 369 IFEKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
IFEKLA EAAKLARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 98 IFEKLAAEAAKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
>sptr|Q43724|Q43724 Histone 2B (Histone H2B) (Fragment).
Length = 152
Score = 180 bits (457), Expect = 1e-44
Identities = 94/116 (81%), Positives = 99/116 (85%)
Frame = +3
Query: 189 RLPAGKSAGKEGGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 368
RLP+ + G + GV SVETYKIYIFKVLKQVHPDIGISSKAM IMNSFIND
Sbjct: 37 RLPSKEGGGDKSGVGKAKKKKKAKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFIND 96
Query: 369 IFEKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
IFEKLA EA++LARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 97 IFEKLAQEASRLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 152
>sptr|Q43217|Q43217 Protein H2B-8 (Histone H2B).
Length = 138
Score = 180 bits (457), Expect = 1e-44
Identities = 96/109 (88%), Positives = 98/109 (89%)
Frame = +3
Query: 210 AGKEGGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAG 389
A KEGG D SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAG
Sbjct: 31 ASKEGG-DKKGKKKSKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAG 89
Query: 390 EAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
E+AKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 90 ESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 138
>sptr|Q43216|Q43216 Protein H2B-6 (Histone H2B).
Length = 136
Score = 180 bits (457), Expect = 1e-44
Identities = 95/108 (87%), Positives = 98/108 (90%)
Frame = +3
Query: 213 GKEGGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGE 392
GK+GG D SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGE
Sbjct: 30 GKDGGADKKKKKAKK-SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGE 88
Query: 393 AAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
+AKLARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 89 SAKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 136
>sw|P49120|H2B4_MAIZE Histone H2B.4.
Length = 137
Score = 179 bits (455), Expect = 2e-44
Identities = 96/108 (88%), Positives = 97/108 (89%)
Frame = +3
Query: 213 GKEGGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGE 392
GKEGG + SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLA E
Sbjct: 31 GKEGG-EKKGKKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAE 89
Query: 393 AAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
AAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 90 AAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 137
>sptr|Q943L2|Q943L2 Putative histone H2B.
Length = 139
Score = 179 bits (453), Expect = 4e-44
Identities = 94/107 (87%), Positives = 96/107 (89%)
Frame = +3
Query: 216 KEGGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEA 395
KEGG + SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLA EA
Sbjct: 33 KEGGGEKKGKKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEA 92
Query: 396 AKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
A+LARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 93 ARLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 139
>sptr|Q43215|Q43215 Protein H2B153 (Histone H2B).
Length = 135
Score = 174 bits (442), Expect = 7e-43
Identities = 92/116 (79%), Positives = 99/116 (85%)
Frame = +3
Query: 189 RLPAGKSAGKEGGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 368
++P K G++ G S+ETYKIYIFKVLKQVHPDIGISSKAMSI NSFIND
Sbjct: 25 KVPTSKEGGEKKG-----KKKSKKSMETYKIYIFKVLKQVHPDIGISSKAMSITNSFIND 79
Query: 369 IFEKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
IFEKLAGE+AKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 80 IFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 135
>sptr|Q9FFC0|Q9FFC0 Histone H2B like protein.
Length = 145
Score = 174 bits (442), Expect = 7e-43
Identities = 93/114 (81%), Positives = 97/114 (85%), Gaps = 1/114 (0%)
Frame = +3
Query: 198 AGKSAGKE-GGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF 374
AGK KE G +VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIF
Sbjct: 32 AGKKLPKEPAGAGDKKKKRSKKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIF 91
Query: 375 EKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
EKLAGE++KLARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 92 EKLAGESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145
>sw|O22582|H2B_GOSHI Histone H2B.
Length = 147
Score = 174 bits (441), Expect = 9e-43
Identities = 94/115 (81%), Positives = 97/115 (84%), Gaps = 2/115 (1%)
Frame = +3
Query: 198 AGKSAGKEGGVDXXXXXXXXX--SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDI 371
AGK KEGG SVETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDI
Sbjct: 33 AGKKLPKEGGAAAGDKKKKRVKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDI 92
Query: 372 FEKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
FEKLA EA++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 93 FEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
>sptr|Q84L43|Q84L43 Putative histone H4.
Length = 141
Score = 173 bits (439), Expect = 2e-42
Identities = 93/113 (82%), Positives = 96/113 (84%)
Frame = +3
Query: 198 AGKSAGKEGGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFE 377
A K KEGG D SVETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFE
Sbjct: 30 AEKKLPKEGG-DKKGKKKHKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFE 88
Query: 378 KLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
KLA EA+KLARYNKKPTITSREIQT+VRL LPGELAKHAVSEGTKAVTKFTS+
Sbjct: 89 KLASEASKLARYNKKPTITSREIQTAVRLALPGELAKHAVSEGTKAVTKFTSA 141
>sw|P40283|H2B_ARATH Histone H2B.
Length = 150
Score = 173 bits (439), Expect = 2e-42
Identities = 94/114 (82%), Positives = 96/114 (84%), Gaps = 1/114 (0%)
Frame = +3
Query: 198 AGKSAGKEGGVDXXXXXXXXX-SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF 374
AGK KE G SVETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIF
Sbjct: 37 AGKKLPKEAGAGGDKKKKMKKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIF 96
Query: 375 EKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
EKLA EA+KLARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 97 EKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
>sptr|Q96516|Q96516 Histone H2B like protein.
Length = 145
Score = 173 bits (438), Expect = 2e-42
Identities = 92/114 (80%), Positives = 97/114 (85%), Gaps = 1/114 (0%)
Frame = +3
Query: 198 AGKSAGKE-GGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF 374
AGK +E G +VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIF
Sbjct: 32 AGKKLPEEPAGAGDKKKKRSKKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIF 91
Query: 375 EKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
EKLAGE++KLARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 92 EKLAGESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145
>sptr|Q9LZT0|Q9LZT0 Histone H2B-like protein.
Length = 145
Score = 173 bits (438), Expect = 2e-42
Identities = 93/114 (81%), Positives = 96/114 (84%), Gaps = 1/114 (0%)
Frame = +3
Query: 198 AGKSAGKEGGVDXXXXXXXXX-SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF 374
AGK KE G SVETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIF
Sbjct: 32 AGKKLPKEAGAGGDKKKKMKKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIF 91
Query: 375 EKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
EKLA E++KLARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 92 EKLASESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145
>sptr|O23629|O23629 Histone H2B (At3g45980).
Length = 150
Score = 173 bits (438), Expect = 2e-42
Identities = 93/114 (81%), Positives = 96/114 (84%), Gaps = 1/114 (0%)
Frame = +3
Query: 198 AGKSAGKEGGVDXXXXXXXXX-SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF 374
AGK KE G SVETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIF
Sbjct: 37 AGKKLPKEAGAGGDKKKKMKKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIF 96
Query: 375 EKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
EKLA E++KLARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 97 EKLASESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
>sptr|O65819|O65819 Histone H2B-3 (Fragment).
Length = 137
Score = 172 bits (437), Expect = 3e-42
Identities = 90/113 (79%), Positives = 95/113 (84%)
Frame = +3
Query: 198 AGKSAGKEGGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFE 377
AGK K+ +VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFE
Sbjct: 25 AGKKLPKDAAAGDKKKKRSKKAVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFE 84
Query: 378 KLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
KLA EA++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 85 KLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 137
>sw|O49118|H2B_CAPAN Histone H2B (CaH2B).
Length = 145
Score = 172 bits (436), Expect = 3e-42
Identities = 89/113 (78%), Positives = 96/113 (84%)
Frame = +3
Query: 198 AGKSAGKEGGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFE 377
AGK K+ G S+ETYKIYIFKVLKQVHPDIGISSK+M IMNSFINDIFE
Sbjct: 33 AGKKLPKDAGRPDKKKKRAKKSIETYKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFE 92
Query: 378 KLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
KLA E+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 93 KLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145
>sptr|Q9SI96|Q9SI96 Putative histone H2B (At2g28720/T11P11.3).
Length = 151
Score = 172 bits (435), Expect = 4e-42
Identities = 95/116 (81%), Positives = 98/116 (84%), Gaps = 3/116 (2%)
Frame = +3
Query: 198 AGKSAGKE---GGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIND 368
AGK KE GGV+ S ETYKIYIFKVLKQVHPDIGISSKAM IMNSFIND
Sbjct: 37 AGKKLPKEAVTGGVEKKKKRVKK-STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFIND 95
Query: 369 IFEKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
IFEKLA EA+KLARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 96 IFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151
>sptr|Q9M3H6|Q9M3H6 Histone H2B.
Length = 139
Score = 171 bits (434), Expect = 6e-42
Identities = 93/113 (82%), Positives = 96/113 (84%)
Frame = +3
Query: 198 AGKSAGKEGGVDXXXXXXXXXSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFE 377
A K KEG D SVETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFE
Sbjct: 28 AEKKISKEGTSDKKKKRVKK-SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFE 86
Query: 378 KLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 536
KLA EA++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 87 KLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 139
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 295,513,391
Number of Sequences: 1272877
Number of extensions: 3714935
Number of successful extensions: 13356
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13334
length of database: 406,886,216
effective HSP length: 118
effective length of database: 256,686,730
effective search space used: 26952106650
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)