BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.451
(1101 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptr|O04014|O04014 Ribosomal protein S6 RPS6-1. 382 e-105
sptr|Q9FYS0|Q9FYS0 Ribosomal protein s6 RPS6-2. 379 e-104
sptr|Q8LH97|Q8LH97 40S ribosomal protein S6. 373 e-102
sw|Q9M3V8|RS6_ASPOF 40S ribosomal protein S6. 359 4e-98
sw|P51430|RS6_ARATH 40S ribosomal protein S6. 355 5e-97
sptr|O81777|O81777 Putative ribosomal protein S6. 354 1e-96
sptrnew|AAP46142|AAP46142 Ribosomal protein S6. 341 1e-92
sptr|O48549|O48549 Ribosomal protein S6. 341 1e-92
sptr|O81925|O81925 40S ribosomal protein S6 (Fragment). 287 2e-76
sptr|Q8N6Z7|Q8N6Z7 Ribosomal protein S6. 245 7e-64
sptrnew|AAH10604|AAH10604 Ribosomal protein S6. 244 2e-63
sptrnew|BAC34340|BAC34340 2 days neonate thymus thymic cells cDN... 244 2e-63
sptrnew|BAB28796|BAB28796 10, 11 days embryo whole body cDNA, RI... 244 2e-63
sptrnew|BAB28498|BAB28498 10, 11 days embryo whole body cDNA, RI... 244 2e-63
sptrnew|BAB28142|BAB28142 11 days embryo whole body cDNA, RIKEN ... 244 2e-63
sptr|Q8BT09|Q8BT09 Ribosomal protein S6. 244 2e-63
sw|P10660|RS6_HUMAN 40S ribosomal protein S6 (Phosphoprotein NP33). 244 2e-63
sptr|Q96DV6|Q96DV6 Similar to ribosomal protein S6. 243 4e-63
sw|Q90YR8|RS6_ICTPU 40S ribosomal protein S6. 243 5e-63
sw|Q9BMX5|RS6_APLCA 40S ribosomal protein S6. 241 1e-62
sw|P47838|RS6_CHICK 40S ribosomal protein S6. 239 7e-62
sptr|Q9PTD6|Q9PTD6 Ribosomal protein S6 (Fragment). 238 1e-61
sw|Q9YGF2|RS6_ONCMY 40S ribosomal protein S6. 236 6e-61
sptr|Q7ZYU0|Q7ZYU0 Similar to ribosomal protein S6. 235 7e-61
sptrnew|AAH54151|AAH54151 Hypothetical protein. 234 2e-60
sw|P39017|RS6_XENLA 40S ribosomal protein S6. 234 2e-60
sw|O01727|RS6_BRAFL 40S ribosomal protein S6. 231 1e-59
sptr|Q8T317|Q8T317 S6 ribosomal protein. 229 5e-59
sptr|Q801G9|Q801G9 Ribosomal protein S6 (Fragment). 227 2e-58
sptrnew|AAN09218|AAN09218 CG10944-PB. 224 2e-57
>sptr|O04014|O04014 Ribosomal protein S6 RPS6-1.
Length = 251
Score = 382 bits (980), Expect = e-105
Identities = 196/230 (85%), Positives = 196/230 (85%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG
Sbjct: 1 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLTSGRVRLLLHRGTPCF CIVSQDLSVINLVIVKKGE
Sbjct: 61 FPMKQGVLTSGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVINLVIVKKGE 120
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 180
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTPLTLQ SEAAEYQKLLAQRLKEQRDRRSE
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRITKKKSEAAEYQKLLAQRLKEQRDRRSE 230
>sptr|Q9FYS0|Q9FYS0 Ribosomal protein s6 RPS6-2.
Length = 251
Score = 379 bits (972), Expect = e-104
Identities = 195/230 (84%), Positives = 195/230 (84%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG
Sbjct: 1 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLTSGRVRLLLHRGTPCF CIVSQDLSVINLVIVKKGE
Sbjct: 61 FPMKQGVLTSGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVINLVIVKKGE 120
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
NDLPGLTDTEKPRMRGPKRASKIRKLFNL KDDDVRKYVNTYRRTFTTKNGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLAKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 180
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTPLTLQ SEAAEYQKLLAQRLKEQRDRRSE
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKKKSEAAEYQKLLAQRLKEQRDRRSE 230
>sptr|Q8LH97|Q8LH97 40S ribosomal protein S6.
Length = 250
Score = 373 bits (958), Expect = e-102
Identities = 190/230 (82%), Positives = 196/230 (85%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MKFNIANP+TGCQKKLEIDDDQKLRAF+D+RISQEVSGDALGEEFKGYVFKIMGGCDKQG
Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT+GRVRLLLHRGTPCF CIVSQDLSVINLVIVKKGE
Sbjct: 61 FPMKQGVLTAGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSQDLSVINLVIVKKGE 120
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
NDLPGLTDTEKPRMRGPKRASKIRKLFNL+KDDDVRKYVNTYRRTFTTKNGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 180
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTPLTLQ SEAAEYQKLLAQRLKEQR+RRSE
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKKKSEAAEYQKLLAQRLKEQRERRSE 230
>sw|Q9M3V8|RS6_ASPOF 40S ribosomal protein S6.
Length = 251
Score = 359 bits (921), Expect = 4e-98
Identities = 183/230 (79%), Positives = 188/230 (81%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MKFNIANP+TGCQKKLEIDDDQKLRAFYD+RISQEVSGDALGEEFKGYVFKIMGGCDKQG
Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT GRVRLLLHRGTPCF CIVS DLSV+NLVIVKKGE
Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
NDLPGLTD EKPRMRGPKRASKIRKLFNL+K+DDVRKYVNTYRRTFT K GK SKAPKI
Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKGKTCSKAPKI 180
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTPLTLQ SEAAEYQKLLA RLKEQRDRRSE
Sbjct: 181 QRLVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKEQRDRRSE 230
>sw|P51430|RS6_ARATH 40S ribosomal protein S6.
Length = 249
Score = 355 bits (912), Expect = 5e-97
Identities = 179/230 (77%), Positives = 189/230 (82%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MKFN+ANP+TGCQKKLEIDDDQKLRAF+D+R+SQEVSGDALGEEFKGYVFKIMGGCDKQG
Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT GRVRLLLHRGTPCF CIVS DLSV+NLVIVKKG
Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
+DLPGLTDTEKPRMRGPKRASKIRKLFNL K+DDVRKYVNTYRRTFT K GKKVSKAPKI
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKI 180
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTPLTLQ S+AA+YQKLLA RLKEQRDRRSE
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSE 230
>sptr|O81777|O81777 Putative ribosomal protein S6.
Length = 250
Score = 354 bits (908), Expect = 1e-96
Identities = 179/230 (77%), Positives = 187/230 (81%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MKFN+ANP+TGCQKKLEIDDDQKLRAFYD+RISQEVSGDALGEEFKGYVFKI GGCDKQG
Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT GRVRLLLHRGTPCF CIVS DLSV+NLVIVKKGE
Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
NDLPGLTDTEKPRMRGPKRASKIRKLFNL K+DDVR YVNTYRR FT K GK+VSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKI 180
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTPLTLQ S+AA+YQKLLA RLKEQRDRRSE
Sbjct: 181 QRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSE 230
>sptrnew|AAP46142|AAP46142 Ribosomal protein S6.
Length = 249
Score = 341 bits (874), Expect = 1e-92
Identities = 173/230 (75%), Positives = 185/230 (80%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MKFN+ANP+TGCQKKLEIDDDQKLRAFYD+R+SQEVSGDALGEEFKGY+FKIMGGCDKQG
Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYIFKIMGGCDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT GRVRLLLHRGTPCF CIVSQDLSV+NLVIVKKGE
Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGE 120
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
DLPGLTDTE RMRGPKRASKIRKLFN K+DDVRKYVNTYRR FT K GK+VSKAPKI
Sbjct: 121 KDLPGLTDTES-RMRGPKRASKIRKLFNFIKEDDVRKYVNTYRRKFTNKKGKEVSKAPKI 179
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTPLTLQ ++AA+YQKLLA RLKEQ D+RSE
Sbjct: 180 QRLVTPLTLQRKRARIADKKKRIAKANAQAADYQKLLASRLKEQSDKRSE 229
>sptr|O48549|O48549 Ribosomal protein S6.
Length = 249
Score = 341 bits (874), Expect = 1e-92
Identities = 175/230 (76%), Positives = 184/230 (80%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MKFN+ANP+TGCQKKLEIDDDQKLRAFYD+RISQEVSGDALGEEFKGYVFKI GGCDKQG
Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT GRVRLLLHRGTPCF CIVS DLSV+NLVIVKKGE
Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
NDLPGLTD E +MRGPKRASKIRKLFNL K+DDVR YVNTYRR FT K GK+VSKAPKI
Sbjct: 121 NDLPGLTDHES-KMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKI 179
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTPLTLQ S+AA+YQKLLA RLKEQRDRRSE
Sbjct: 180 QRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSE 229
>sptr|O81925|O81925 40S ribosomal protein S6 (Fragment).
Length = 212
Score = 287 bits (735), Expect = 2e-76
Identities = 148/193 (76%), Positives = 152/193 (78%)
Frame = +2
Query: 206 GDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXX 385
GDALGEEFKGYVFKI GGCDKQGFPMKQGVLT GRVRLLLHRGTPCF
Sbjct: 1 GDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRK 60
Query: 386 XXXXCIVSQDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRK 565
CIVS DLSV+NLVIVKKGENDLPGLTD EKPRMRGPKRASKIRKLFNL+K+DDVRK
Sbjct: 61 SVRGCIVSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRK 120
Query: 566 YVNTYRRTFTTKNGKKVSKAPKIQRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLL 745
YVNTYRR FTTK GKKVSKAPKIQRLVTPLTLQ SEAAEYQKLL
Sbjct: 121 YVNTYRRNFTTKAGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLL 180
Query: 746 AQRLKEQRDRRSE 784
A RLKEQR+RRSE
Sbjct: 181 ASRLKEQRERRSE 193
>sptr|Q8N6Z7|Q8N6Z7 Ribosomal protein S6.
Length = 249
Score = 245 bits (626), Expect = 7e-64
Identities = 130/230 (56%), Positives = 159/230 (69%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MK NI+ P+TGCQK +E+DD++KLR FY++R++ EV+ DALGEE+KGYV +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIVKKGE
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
D+PGLTDT PR GPKRAS+IRKLFNL+K+DDVR+YV R+ + K +KAPKI
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 176
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTP LQ EAAEY KLLA+R+KE R++R E
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAREKRQE 226
>sptrnew|AAH10604|AAH10604 Ribosomal protein S6.
Length = 249
Score = 244 bits (623), Expect = 2e-63
Identities = 129/230 (56%), Positives = 159/230 (69%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MK NI+ P+TGCQK +E+DD++KLR FY++R++ EV+ DALGEE+KGYV +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIVKKGE
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
D+PGLTDT PR GPKRAS+IRKLFNL+K+DDVR+YV R+ + K +KAPKI
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 176
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTP LQ EAAEY KLLA+R+KE +++R E
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQE 226
>sptrnew|BAC34340|BAC34340 2 days neonate thymus thymic cells cDNA,
RIKEN full-length enriched library, clone:C920016E05
product:ribosomal protein S6, full insert sequence.
Length = 249
Score = 244 bits (623), Expect = 2e-63
Identities = 129/230 (56%), Positives = 159/230 (69%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MK NI+ P+TGCQK +E+DD++KLR FY++R++ EV+ DALGEE+KGYV +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIVKKGE
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
D+PGLTDT PR GPKRAS+IRKLFNL+K+DDVR+YV R+ + K +KAPKI
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 176
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTP LQ EAAEY KLLA+R+KE +++R E
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQE 226
>sptrnew|BAB28796|BAB28796 10, 11 days embryo whole body cDNA, RIKEN
full-length enriched library, clone:2810452K15
product:ribosomal protein S6, full insert sequence.
Length = 249
Score = 244 bits (623), Expect = 2e-63
Identities = 129/230 (56%), Positives = 159/230 (69%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MK NI+ P+TGCQK +E+DD++KLR FY++R++ EV+ DALGEE+KGYV +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIVKKGE
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
D+PGLTDT PR GPKRAS+IRKLFNL+K+DDVR+YV R+ + K +KAPKI
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 176
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTP LQ EAAEY KLLA+R+KE +++R E
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQE 226
>sptrnew|BAB28498|BAB28498 10, 11 days embryo whole body cDNA, RIKEN
full-length enriched library, clone:2810027I03
product:ribosomal protein S6, full insert sequence.
Length = 249
Score = 244 bits (623), Expect = 2e-63
Identities = 129/230 (56%), Positives = 159/230 (69%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MK NI+ P+TGCQK +E+DD++KLR FY++R++ EV+ DALGEE+KGYV +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIVKKGE
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
D+PGLTDT PR GPKRAS+IRKLFNL+K+DDVR+YV R+ + K +KAPKI
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 176
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTP LQ EAAEY KLLA+R+KE +++R E
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQE 226
>sptrnew|BAB28142|BAB28142 11 days embryo whole body cDNA, RIKEN
full-length enriched library, clone:2700023L07
product:ribosomal protein S6, full insert sequence.
Length = 249
Score = 244 bits (623), Expect = 2e-63
Identities = 129/230 (56%), Positives = 159/230 (69%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MK NI+ P+TGCQK +E+DD++KLR FY++R++ EV+ DALGEE+KGYV +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIVKKGE
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
D+PGLTDT PR GPKRAS+IRKLFNL+K+DDVR+YV R+ + K +KAPKI
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 176
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTP LQ EAAEY KLLA+R+KE +++R E
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQE 226
>sptr|Q8BT09|Q8BT09 Ribosomal protein S6.
Length = 249
Score = 244 bits (623), Expect = 2e-63
Identities = 129/230 (56%), Positives = 159/230 (69%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MK NI+ P+TGCQK +E+DD++KLR FY++R++ EV+ DALGEE+KGYV +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIVKKGE
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
D+PGLTDT PR GPKRAS+IRKLFNL+K+DDVR+YV R+ + K +KAPKI
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 176
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTP LQ EAAEY KLLA+R+KE +++R E
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTKENKEEAAEYAKLLAKRMKEAKEKRQE 226
>sw|P10660|RS6_HUMAN 40S ribosomal protein S6 (Phosphoprotein NP33).
Length = 249
Score = 244 bits (623), Expect = 2e-63
Identities = 129/230 (56%), Positives = 159/230 (69%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MK NI+ P+TGCQK +E+DD++KLR FY++R++ EV+ DALGEE+KGYV +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIVKKGE
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
D+PGLTDT PR GPKRAS+IRKLFNL+K+DDVR+YV R+ + K +KAPKI
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 176
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTP LQ EAAEY KLLA+R+KE +++R E
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQE 226
>sptr|Q96DV6|Q96DV6 Similar to ribosomal protein S6.
Length = 249
Score = 243 bits (620), Expect = 4e-63
Identities = 128/230 (55%), Positives = 159/230 (69%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MK NI+ P+TGCQK +E+DD++KLR FY++R++ EV+ DALGEE+KGYV +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIVKKGE
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
D+PGLTDT PR GPKRAS+IRKLFNL+K+DDVR+YV R+ + K ++APKI
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTRAPKI 176
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTP LQ EAAEY KLLA+R+KE +++R E
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQE 226
>sw|Q90YR8|RS6_ICTPU 40S ribosomal protein S6.
Length = 249
Score = 243 bits (619), Expect = 5e-63
Identities = 127/230 (55%), Positives = 160/230 (69%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MK NI+ P+TGCQK +E+DD++KLR FY++R++ EV+ D LG+E+KGYV +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT+GRVRLLL +G C+ CIV +LSV+NLVI++KGE
Sbjct: 61 FPMKQGVLTNGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIIRKGE 118
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
D+PGLTD+ PR GPKRAS+IRKLFNL+K+DDVR+YV RR T + K +KAPKI
Sbjct: 119 KDIPGLTDSTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRRPLTKEGKKPRTKAPKI 176
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTP LQ EAAEY KLLA+RLKE +++R E
Sbjct: 177 QRLVTPRVLQHKRRRIALKRQRTQKNKDEAAEYAKLLAKRLKEAKEKRQE 226
>sw|Q9BMX5|RS6_APLCA 40S ribosomal protein S6.
Length = 247
Score = 241 bits (615), Expect = 1e-62
Identities = 129/231 (55%), Positives = 159/231 (68%), Gaps = 1/231 (0%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MK NI+ P+TGCQK +E+DD++KLR FYD+RIS E+S D LG+E+KGYV +I GG DKQG
Sbjct: 1 MKLNISYPATGCQKLIEVDDEKKLRPFYDKRISAELSADCLGDEWKGYVVRISGGNDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT+ RVRLLL + C+ CIV +LSV++LVI+KKGE
Sbjct: 61 FPMKQGVLTATRVRLLLDKNHSCY--RPRRTGERKRKSVRGCIVDSNLSVLSLVIIKKGE 118
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKV-SKAPK 631
D+PGLTD PR GPKRASKIRKLFNL+K+DDVR+YV RR ++GKK SKAPK
Sbjct: 119 QDIPGLTDKTIPRRLGPKRASKIRKLFNLSKEDDVRQYV--VRRPLPERDGKKAKSKAPK 176
Query: 632 IQRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
IQRLVTP+ LQ + AEY KLLAQR+KE ++R+ E
Sbjct: 177 IQRLVTPVVLQRKRARMALKKKRVTKKREDHAEYTKLLAQRMKEAKERKME 227
>sw|P47838|RS6_CHICK 40S ribosomal protein S6.
Length = 249
Score = 239 bits (609), Expect = 7e-62
Identities = 125/230 (54%), Positives = 158/230 (68%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MK NI+ P+TGCQK +E+DD++ +R FY++R++ EV+ D+LGEE+KGYV +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERNVRTFYEKRMATEVAADSLGEEWKGYVVRISGGNDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIVKKGE
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
D+PGLTDT PR GPKRAS+IRKLFNL+K+DDVR+YV R+ + K +KAPKI
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 176
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTP LQ EAA+Y KLLA+R+KE +++R E
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTQKNKEEAADYAKLLAKRMKEAKEKRQE 226
>sptr|Q9PTD6|Q9PTD6 Ribosomal protein S6 (Fragment).
Length = 247
Score = 238 bits (607), Expect = 1e-61
Identities = 125/227 (55%), Positives = 157/227 (69%)
Frame = +2
Query: 104 NIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPM 283
NI+ P+TGCQK +E+DD++KLR FY++R++ EV+ D+LGEE+KGYV +I GG DKQGFPM
Sbjct: 2 NISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADSLGEEWKGYVVRISGGNDKQGFPM 61
Query: 284 KQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGENDL 463
KQGVLT GRVRLLL +G C+ CIV +LSV+NLVIVKKGE D+
Sbjct: 62 KQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 119
Query: 464 PGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKIQRL 643
PGLTDT PR GPKRAS+IRKLFNL+K+DDVR+YV R+ + K +KAPKIQRL
Sbjct: 120 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKIQRL 177
Query: 644 VTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
VTP LQ EAA+Y KLLA+R+KE +++R E
Sbjct: 178 VTPRVLQHKRRRIALKKQRTQKNKEEAADYAKLLAKRMKEAKEKRQE 224
>sw|Q9YGF2|RS6_ONCMY 40S ribosomal protein S6.
Length = 249
Score = 236 bits (601), Expect = 6e-61
Identities = 124/230 (53%), Positives = 157/230 (68%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MK NI+ P+TGCQK +E+DD++KLR FY++R++ EV+ D LG+E+KGY+ +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYMVRISGGNDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT GRVRLLL +G C+ CI +LSV+NLVI+KKGE
Sbjct: 61 FPMKQGVLTHGRVRLLLAKGHSCY--RPRRTGERKRKSVRGCIGDANLSVLNLVIIKKGE 118
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
D+PGLTD+ PR GPKRASKIRKLFNL K+DDVR+YV RR T + K +KAP+I
Sbjct: 119 KDIPGLTDSTVPRRLGPKRASKIRKLFNLAKEDDVRQYV--VRRPLTKEGKKPRTKAPRI 176
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTP LQ EA+EY KLLA+R+KE +++R E
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTQKNKEEASEYAKLLAKRMKEAKEKRQE 226
>sptr|Q7ZYU0|Q7ZYU0 Similar to ribosomal protein S6.
Length = 249
Score = 235 bits (600), Expect = 7e-61
Identities = 124/230 (53%), Positives = 157/230 (68%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MK NI+ P+TGCQK +E++D++KLR FY++R++ EVS D LG+E+KGYV +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVEDERKLRTFYEKRMATEVSADPLGDEWKGYVVRISGGNDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIV+KGE
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVRKGE 118
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
D+PGLTD PR GPKRAS+IRKLFNL+K+DDVR+YV R+ + + K +KAPKI
Sbjct: 119 KDIPGLTDNTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLSKEGKKPRTKAPKI 176
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTP LQ EA+EY KLLA+R KE +++R E
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTQKNKEEASEYAKLLAKRSKEAKEKRQE 226
>sptrnew|AAH54151|AAH54151 Hypothetical protein.
Length = 249
Score = 234 bits (596), Expect = 2e-60
Identities = 123/230 (53%), Positives = 156/230 (67%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MK NI+ P+TGCQK +E++D++KLR FY++R++ EV+ D LG+E+KGYV +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVEDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIV+KGE
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVRKGE 118
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
D+PGLTD PR GPKRAS+IRKLFNL+K+DDVR+YV R+ + K +KAPKI
Sbjct: 119 KDIPGLTDNTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLAKEGKKPRTKAPKI 176
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTP LQ EA+EY KLLA+R KE +++R E
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTQKNKEEASEYAKLLAKRSKEAKEKRQE 226
>sw|P39017|RS6_XENLA 40S ribosomal protein S6.
Length = 249
Score = 234 bits (596), Expect = 2e-60
Identities = 123/230 (53%), Positives = 156/230 (67%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MK NI+ P+TGCQK +E++D++KLR FY++R++ EV+ D LG+E+KGYV +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVEDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIV+KGE
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVRKGE 118
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKI 634
D+PGLTD PR GPKRAS+IRKLFNL+K+DDVR+YV R+ + K +KAPKI
Sbjct: 119 KDIPGLTDNTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLAKEGKKPRTKAPKI 176
Query: 635 QRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
QRLVTP LQ EA+EY KLLA+R KE +++R E
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTQKNKEEASEYAKLLAKRSKEAKEKRQE 226
>sw|O01727|RS6_BRAFL 40S ribosomal protein S6.
Length = 244
Score = 231 bits (589), Expect = 1e-59
Identities = 122/231 (52%), Positives = 156/231 (67%), Gaps = 1/231 (0%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MK NI+ P+TGCQK +E+DD++KLR FY++R+S +++ ++LG+E+KGY+ +I GG DKQG
Sbjct: 1 MKINISYPATGCQKLIEVDDERKLRPFYEKRMSHQMTAESLGDEWKGYLVRISGGNDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT+GRVRLLL +G C+ CIV +LSV+NLVI+KKGE
Sbjct: 61 FPMKQGVLTNGRVRLLLGKGHSCY--RPRRTGERKRKSVRGCIVDSNLSVLNLVILKKGE 118
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVS-KAPK 631
D+PGLTDT PR GPKRA +IRKLFNLNK+DDVR+YV RR K GKK K PK
Sbjct: 119 QDIPGLTDTTIPRRLGPKRAGRIRKLFNLNKEDDVRQYV--VRRPLPQKEGKKQKFKTPK 176
Query: 632 IQRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
IQRL+TP LQ E A Y KLLA+R KE+R+ ++
Sbjct: 177 IQRLITPQRLQRKRHMRAVKRRRYAKQREEEATYAKLLAKRKKEEREAHAK 227
>sptr|Q8T317|Q8T317 S6 ribosomal protein.
Length = 245
Score = 229 bits (584), Expect = 5e-59
Identities = 125/228 (54%), Positives = 152/228 (66%), Gaps = 2/228 (0%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MK NI+ P+ G QK +E+DD+ KLRAFYD+R++ E++ ++LG+E+KGYV +I GG DKQG
Sbjct: 1 MKLNISYPAVGSQKLIEVDDEHKLRAFYDKRMAHEMTAESLGDEWKGYVVRISGGNDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT+GRVRLLL +G C+ CIV +LSV+NLVIV KGE
Sbjct: 61 FPMKQGVLTNGRVRLLLSKGHSCY--RPRRRGERKRKSVRGCIVDANLSVLNLVIVNKGE 118
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVS--KAP 628
++PGLTD PR GPKRA KIRKLFNL K+DDVR+YV RR K G+K KAP
Sbjct: 119 GEIPGLTDKSVPRRLGPKRAGKIRKLFNLTKEDDVRQYV--VRRPLPPKEGRKSPKYKAP 176
Query: 629 KIQRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRD 772
KIQRL+TP LQ EAAEY KLLAQR KE+RD
Sbjct: 177 KIQRLITPERLQRKRHNVAIKRRRADRNKVEAAEYAKLLAQRQKEKRD 224
>sptr|Q801G9|Q801G9 Ribosomal protein S6 (Fragment).
Length = 230
Score = 227 bits (579), Expect = 2e-58
Identities = 119/221 (53%), Positives = 150/221 (67%)
Frame = +2
Query: 122 TGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLT 301
TGCQK +E+DD++KLR FY++R++ EV+ D LG+E+KGYV +I GG DKQGFPMKQG+LT
Sbjct: 1 TGCQKLIEVDDERKLRTFYEKRMATEVAADCLGDEWKGYVVRISGGNDKQGFPMKQGILT 60
Query: 302 SGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGENDLPGLTDT 481
+GRVRLLL +G C+ CIV +LSV+NLVI+KKGE D+PG TD
Sbjct: 61 NGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIIKKGEKDIPGPTDN 118
Query: 482 EKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSKAPKIQRLVTPLTL 661
PR GPKRASKIRKLFNL+K+DDVR+YV RR + + K +KAPKIQRLVTP L
Sbjct: 119 TVPRRLGPKRASKIRKLFNLSKEDDVRQYV--VRRPLSKEGKKPRTKAPKIQRLVTPRVL 176
Query: 662 QXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
Q AAEY KLLA+R+KE +++R E
Sbjct: 177 QHRRRRIALKKHRTQKNKEAAAEYAKLLAKRMKEAKEKRQE 217
>sptrnew|AAN09218|AAN09218 CG10944-PB.
Length = 248
Score = 224 bits (571), Expect = 2e-57
Identities = 119/231 (51%), Positives = 150/231 (64%), Gaps = 1/231 (0%)
Frame = +2
Query: 95 MKFNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQG 274
MK N++ P+TGCQK E+ D+ KLR FY++R+ Q V D LG+E+KGY +I GG DKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 275 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 454
FPMKQGVLT GRVRLLL +G C+ CIV ++SV+ LV++KKGE
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDANMSVLALVVLKKGE 118
Query: 455 NDLPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKK-VSKAPK 631
D+PGLTDT PR GPKRASKIRKL+NL+K+DDVR++V RR K+ KK SKAPK
Sbjct: 119 KDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFV--VRRPLPAKDNKKATSKAPK 176
Query: 632 IQRLVTPLTLQXXXXXXXXXXXXXXXXXSEAAEYQKLLAQRLKEQRDRRSE 784
IQRL+TP+ LQ +A+Y KLL QR KE + +R E
Sbjct: 177 IQRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 638,364,236
Number of Sequences: 1272877
Number of extensions: 11561474
Number of successful extensions: 30090
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29963
length of database: 406,886,216
effective HSP length: 124
effective length of database: 249,049,468
effective search space used: 60269971256
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)